NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081372

Metagenome / Metatranscriptome Family F081372

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081372
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 105 residues
Representative Sequence CVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Number of Associated Samples 98
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 10.53 %
% of genes near scaffold ends (potentially truncated) 56.14 %
% of genes from short scaffolds (< 2000 bps) 99.12 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (100.000 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(14.035 % of family members)
Environment Ontology (ENVO) Unclassified
(50.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(75.439 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170
1JGI20158J14315_100899542
2GOS2249_10014153
3B570J40625_1013974142
4JGI26079J46598_10228223
5JGI26083J51738_101211971
6JGI26087J52781_10198432
7Ga0007829_100894211
8Ga0066831_100130892
9Ga0070742_101750902
10Ga0075466_10774322
11Ga0007816_10853902
12Ga0075493_13911242
13Ga0099654_106070592
14Ga0075467_103209511
15Ga0102880_11396632
16Ga0105748_105482292
17Ga0114344_12300151
18Ga0114346_13271881
19Ga0114351_12531211
20Ga0114355_12019291
21Ga0102911_10441733
22Ga0115566_101010182
23Ga0115566_101101563
24Ga0102815_103536681
25Ga0114962_103145182
26Ga0114995_102674693
27Ga0103872_10211192
28Ga0103872_10220881
29Ga0103872_10383661
30Ga0103873_10709482
31Ga0103873_10748471
32Ga0115553_10578792
33Ga0115553_11744552
34Ga0115567_102533882
35Ga0115004_103060562
36Ga0115103_13564242
37Ga0115103_14573011
38Ga0115103_16174851
39Ga0115102_101962561
40Ga0115102_104440511
41Ga0115102_106604921
42Ga0129324_101521071
43Ga0129347_11789173
44Ga0129344_13840291
45Ga0129326_14203681
46Ga0129350_12463011
47Ga0129331_12076362
48Ga0129352_100805052
49Ga0129340_12728721
50Ga0129340_13262702
51Ga0129346_12457901
52Ga0129346_12577922
53Ga0129332_14795922
54Ga0182088_12786432
55Ga0182045_12025941
56Ga0182051_13013941
57Ga0182056_12457341
58Ga0182047_14227372
59Ga0181424_104690372
60Ga0181607_102913501
61Ga0181560_102025672
62Ga0181563_102771152
63Ga0192969_10379981
64Ga0192967_10523913
65Ga0192894_102343711
66Ga0192968_100811111
67Ga0192947_101279023
68Ga0192982_101158951
69Ga0192951_101848612
70Ga0192998_101995873
71Ga0192966_101402301
72Ga0192826_102349122
73Ga0182097_10643222
74Ga0182066_13054612
75Ga0182059_12889892
76Ga0182067_14490081
77Ga0182086_10985332
78Ga0210307_10772941
79Ga0206692_15874491
80Ga0206689_105863221
81Ga0213861_101311451
82Ga0213861_103664781
83Ga0063086_10229461
84Ga0063086_10601931
85Ga0222713_103283052
86Ga0255777_102914481
87Ga0208866_10046582
88Ga0208739_10478171
89Ga0209654_10410262
90Ga0209771_10416092
91Ga0209308_101552541
92Ga0209308_101944482
93Ga0209425_102536802
94Ga0208275_10114062
95Ga0209617_101635591
96Ga0209192_101479491
97Ga0255057_103810601
98Ga0247582_11260811
99Ga0256411_12668521
100Ga0307398_106439811
101Ga0073978_15773651
102Ga0307388_103557151
103Ga0307388_107901063
104Ga0307387_104340173
105Ga0307384_105474451
106Ga0315907_108450931
107Ga0314673_103014281
108Ga0314687_104866562
109Ga0314706_105476771
110Ga0314704_103202571
111Ga0314694_102596852
112Ga0314694_102833733
113Ga0307390_107228921
114Ga0334989_0282324_162_431
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.95%    β-sheet: 9.16%    Coil/Unstructured: 64.89%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100CVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGYSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains




 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater
Freshwater And Sediment
Freshwater
Freshwater
Freshwater, Plankton
Freshwater Lake
Lake
Freshwater
Marine
Seawater
Seawater
Aqueous
Seawater
Freshwater To Marine Saline Gradient
Estuary Water
Marine
Estuarine
Salt Marsh
Marine
Estuarine
Estuarine Water
Pelagic Marine
Pelagic Marine
Seawater
Seawater
Surface Ocean Water
3.5%3.5%12.3%5.3%12.3%3.5%5.3%3.5%12.3%14.0%6.1%4.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI20158J14315_1008995423300001355Pelagic MarineMSHPSRIALQMVLGRRATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHHGVGY*
GOS2249_100141533300001951MarineMSNKYAYDYACEDEFFEREMTMLDAKITKLPLPLDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
B570J40625_10139741423300002835FreshwaterVIIPKSTIFASRLGMTNKYAYDYACEDEFFEREMTLLDAKLLSLPLPENLRHKEAPTDELLPPHWNDVRFNYFPENIDRRCFIHDNLAIFYNMEHDYLHGVGF*
JGI26079J46598_102282233300003216MarineMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
JGI26083J51738_1012119713300003621MarineIKSLKLKMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
JGI26087J52781_101984323300003909MarineLKMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0007829_1008942113300004095FreshwaterMTNKYAYDYACEDEFFEREMTLLDAKLLSLPLPDNIRHKDAPTDELQPPHWNDVRFNYFPENIDRRCYIHDNLAIFYNMEHDYLHGVGF*
Ga0066831_1001308923300005516MarineMFNSIVPKSTIYATRLGMTNKYAYDYACEDEFFEREMTFLEARLMHLPIPDDFKHKELPIDEIYPPHWNDVRFNFHPENIDRRAFIHDNLVIFYNM*
Ga0070742_1017509023300005942EstuarineSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0075466_107743223300006029AqueousMAFRRNNLIVPKATIFASRLGMTNKYAHDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY*
Ga0007816_108539023300006115FreshwaterAYDYACEDEFFEREMTLLDAKLLSLPLPDNIRHKDAPTDELQPPHWNDVRFNYFPENIDRRCYIHDNLAIFYNMEHDYLHGVGF*
Ga0075493_139112423300006396AqueousKRQLINMAFRRNNLIVPKATIFASRLGMTNKYAHDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY*
Ga0099654_1060705923300006415LakeMSNKYAYDYACEDEFFEREMTLLDAKLLSLPLPENFRHKEAPTDEIYPPHWNDVRFNYFPENIDRRCFIHDNLPIFYNMEHDYLHGVGY*
Ga0075467_1032095113300006803AqueousMSQRLALSMVMRRTSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVDAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0102880_113966323300007550EstuarineMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0105748_1054822923300007992Estuary WaterCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0114344_123001513300008111Freshwater, PlanktonYDYACEDEFFEREMTLLDAKLLSLPLPENLRHKEAPTDELLPPHWNDVRFNYFPENIDRRCFIHDNLAIFYNMEHDYLHGVGF*
Ga0114346_132718813300008113Freshwater, PlanktonRLGMTNKYAYDYACEDEFFEREMTLLDAKLLSLPLPENLRHKEAPTDELLPPHWNDVRFNYFPENIDRRCFIHDNLAIFYNMEHDYLHGVGF*
Ga0114351_125312113300008117Freshwater, PlanktonMTNKYAYDYACEDEFFEREMTLLDAKLLSLPLPENLRHKEAPTDELLPPHWNDVRFNYFPENIDRRCFIHDNLAIFYNMEHDYLHGVGF*
Ga0114355_120192913300008120Freshwater, PlanktonMTLLDAKLLSLPLPENLRHKEAPTDELLPPHWNDVRFNYFPENIDRRCFIHDNLAIFYNMEHDYLHGVGF*
Ga0102911_104417333300009049EstuarineMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0115566_1010101823300009071Pelagic MarineMVLGRRATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0115566_1011015633300009071Pelagic MarineMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVDAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0102815_1035366813300009080EstuarineKSLKLKMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0114962_1031451823300009151Freshwater LakeMSNKYAYDYACEDEFFEREMTLLDAKLMSLPLPENFRHKEAPVDELLPPHWNDVRFNYFPENIDRRCFIHDNLPIFYNMEHDYLHGVGF*
Ga0114995_1026746933300009172MarineMGARSIRNSCITPRATIYAARIGMTNKYAFDYACEDEYHEREMTLADAKTMTLPLPDNFRHKSLPMDDYYPPHWNDVRFNHRQQNFDRRMFLHDNMAISYNM*
Ga0103872_102111923300009263Surface Ocean WaterMILNNSCVVSKTSIYATRLGMSNKYKFDYACEDEFFEREMTSLDAKLMHLPIPDNYRHKSLPMDEYMPPHWNDVRFNFLPQNIDRRCYIHDNLAILYNM*
Ga0103872_102208813300009263Surface Ocean WaterVLRRNSCVVPRSTLYASRLGMSNKYAYDYACEDEFFEREMTMLDAKITKLPLPLDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0103872_103836613300009263Surface Ocean WaterNKYAYDYACEDEFFEREMTMLDAKITKLPLGEDFRHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYVHDNLAIFYDMQNDYMHGVGF*
Ga0103873_107094823300009265Surface Ocean WaterASRLGMTNKYAYYYACEDEFFEREMTMLDAKITKLPLGEDFRHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYVHDNLAIFYDMQNDYMHGVGF*
Ga0103873_107484713300009265Surface Ocean WaterMTSLDAKLMHLPIPDNYRHKSLPMDEYMPPHWNDVRFNFLPQNIDRRCYIHDNLAILYNMQDDYMHGVGF*
Ga0115553_105787923300009445Pelagic MarineMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVDAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0115553_117445523300009445Pelagic MarineMVMGRRATCVVPKATLFSSRLGMTNKYAYDYACEDEFFEREMTLLDARTTHLPLPVDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDM*
Ga0115567_1025338823300009508Pelagic MarineMVMGRRATCVVPKATLFSSRLGMTNKYAYDYACEDEFFEREMTMLDARTTHLPLPVDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDM*
Ga0115004_1030605623300009526MarineMGARSIRNSCITPRATIYAARIGMTNKYAFDYACEDEYHEREMTLADAKTLTLPLPDNFRHKSLPMDDYYPPHWNDVRFNHRQQNFDRRMFLHDNMAISYNM*
Ga0115103_135642423300009599MarineSVVVPRATIYASRLGMTNKYANDYACEDEYFEREMTLLDSKLTHLPLGDDYRHKELPVDEYQPSHWNDVRFNYLPQNMDRRMFLHDGRSILYNMHEDYHHGVGY*
Ga0115103_145730113300009599MarineINMSKRLALNMVLRSRASPVVPKSMIYASRLGMSNKYAHDYACEDEYFEREMTLLDAKLLPLPLPDDYRHKELPIDEIYPPHWNDVRFNFLPQNLDRRAYIHDNLMNQYDM*
Ga0115103_161748513300009599MarineQRLALNMVLRRNSIIVPRSTLYASRLGMSNKYAYDYACEDEFFEREMTLLDAKITKLPLPLDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY*
Ga0115102_1019625613300009606MarineLAVQAAFGPGRRAIGINMLVPNKTAFFASRLGMTNKYAHDYACEDEYFEREMTLLDAKLMHLPIPTHHKHKAAPVDDMQPPHWNDVRFNYFPQNLDRRCYIHDNLAIFYNMQDDYMHGVGF*
Ga0115102_1044405113300009606MarineMSMVLGRRATCIVPKATIFSARLGMTNKYAYDYACEDEFFEREMTLLDARTTQLPLPDDFRHKEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNMAIFYDMQNDYHHGVGY*
Ga0115102_1066049213300009606MarineSRLAMQMVLGKGRISCIVPKSTIFATRLGMTNKYAHDYACEDEFFEREMTMLDAKITKLPLGEDFRHVEAPTDEIQPPHWNDVRFNFLPQNIDRRCYVHDNLAIFYDMQNDYMHGVGF*
Ga0129324_1015210713300010368Freshwater To Marine Saline GradientVVPRAAIYASRLGMTNKYANDYACEDEYFEREMTLLDSKLMHLPLPDDYHHKELPVDEYQPSHWNDVRFNYLPQNFDRRMFLHDGRTILYNMHEDYHHGVGY*
Ga0129347_117891733300012504AqueousVKMNHPSRIAMQMVLGRRATCVVPKATLFSSRLGMTNKYAHDYACEDEFFEREMTLLDARTTHLPLPEDFRHKELPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0129344_138402913300012520AqueousSNSCIVSKTSIYATRLGMSNKYKFDYACEDEFFEREMTSLDAKLMHLPIPDNYRHKSLPMDEYMPPHWNDVRFNFLPQNIDRRCYIHDNLAILYNMQDDYMHGVGF*
Ga0129326_142036813300012522AqueousHPSRIALQMVLGRRATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0129350_124630113300012523AqueousRIAMQMVLGRRATCVVPKATLFSSRLGMTNKYAHDYACEDEFFEREMTLLDARTTHLPLPEDFRHKELPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0129331_120763623300012524AqueousATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0129352_1008050523300012528AqueousMSNKYKFDYACEDEFFEREMTSLDAKLMHLPIPDNYRHKSLPMDEYMPPHWNDVRFNFLPQNIDRRCYIHDNLAILYNMQDDYMHGVGF*
Ga0129340_127287213300012963AqueousNHPSRIAMQMVLGRRATCVVPKATLFSSRLGMTNKYAHDYACEDEFFEREMTLLDARTTHLPLPEDFRHKELPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVGY
Ga0129340_132627023300012963AqueousTALQRVLGGRSMILSNSCIVSKTSIYATRLGMSNKYKFDYACEDEFFEREMTSLDAKLMHLPIPDNYRHKSLPMDEYMPPHWNDVRFNFLPQNIDRRCYIHDNLAILYNMQDDYMHGVGF
Ga0129346_124579013300012965AqueousQMVLGRRATCVVPKATLFSSRLGMTNKYAHDYACEDEFFEREMTLLDARTTHLPLPEDFRHKELPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0129346_125779223300012965AqueousALQRVLGGRSMILSNSCIVSKTSIYATRLGMSNKYKFDYACEDEFFEREMTSLDAKLMHLPIPDNYRHKSLPMDEYMPPHWNDVRFNFLPQNIDRRCYIHDNLAILYNMQDDYMHGVGF*
Ga0129332_147959223300012969AqueousVKMSHPSRIALQMVLGRRATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHHGVGY*
Ga0182088_127864323300016703Salt MarshVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0182045_120259413300016726Salt MarshLGMTNKYAHDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY
Ga0182051_130139413300016727Salt MarshIVPKATIFASRLGMTNKYAYDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY
Ga0182056_124573413300016729Salt MarshRNSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0182047_142273723300016737Salt MarshYAYDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY
Ga0181424_1046903723300017786SeawaterGRRATCVVPKSTLFSSRLGMTNKYAYDYACEDEFFEREMTMLDARSTHLPLPEDWRHKELPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVGY
Ga0181607_1029135013300017950Salt MarshMSQRLALSMVMRRNSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0181560_1020256723300018413Salt MarshMSKRQLINMAFRRNNLIVPKATIFASRLGMTNKYAHDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY
Ga0181563_1027711523300018420Salt MarshMAFRRNNLIVPKATIFASRLGMTNKYAHDYACEDEYFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPPHWNDVRFNFLPQNLDRRCFIHDNMAIFYNMHNDYYHGVGY
Ga0192969_103799813300018649MarineSRLGMSNKYANDYACEDEFFEREMTLLEAKETHLPLSDNFKHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIFYDMKNDYMHGVGF
Ga0192967_105239133300018730MarineEMTLLEAKETHLPLSDNFKHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIFYDMKNDYMHGVGF
Ga0192894_1023437113300018968MarineRLGMTNRYAYDYACEDEYYEKEMTMLEAKVFHLPLPETHKHKEYPLHDLYAPHWNDVRFNFLPQNLDRRNFSHDNLPIFYNMHMDYHHGIGY
Ga0192968_1008111113300018981MarineMFLSSSGLAPKSTIFASRLGMSNKYANDYACEDEFFEREMTLLEAKETHLPLSDNFKHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIFYDMKNDYMHGVGF
Ga0192947_1012790233300018982MarineSLYSSRLGMTNKYAYDYACEDEFFEREMTLLDAKMMSLPLPDDFKHKELPMNEIFPPHINDVRFNFLPQNIDRRCFIHDNMAIFYDLNKDYHHGVGYIDEDMDYELPDPYSDMH
Ga0192982_1011589513300019021MarineMFLSCSGLAPKSTIFASRLGMSNKYANDYACEDEFFEREMTLLEAKETHLPLSDNFKHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIFYDMKNDYMHGVGF
Ga0192951_1018486123300019022MarineCSGLAPKSTIFASRLGMSNKYANDYACEDEFFEREMTLLEAKETHLPLSDNFRHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIFYNMKDDYMHGVGF
Ga0192998_1019958733300019043MarineDYACEDEFFEREMTLLDAKLMHFPVETRHKSLPMDEFQPPHWNDVRFNYLPEKIDRRCYIHDNLAVYYNMQTDYMHGVGF
Ga0192966_1014023013300019050MarineMSHPSRIAMQMVLGRRATCIVPKSTLFSTRLGMTNKYAHDYACEDEFFEREMTLLDARTMSLPLSEDFRHAEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVG
Ga0192826_1023491223300019051MarineFEREMTLLEAKETHLPLSDNFRHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIYYNMKDDYMHGVGF
Ga0182097_106432223300019261Salt MarshALSMVMRRNSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0182066_130546123300019262Salt MarshQRLALSMVMRRNSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0182059_128898923300019272Salt MarshLALSMVMRRNSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0182067_144900813300019276Salt MarshLGMTNKYAYDYACEDEFFEREMTLHNAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGF
Ga0182086_109853323300020013Salt MarshGMTNKYAYDYACEDEFFEREMTLLDAKITHLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0210307_107729413300021336EstuarineMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0206692_158744913300021350SeawaterMVMKRTNGMVNPSMLVGCVAPKNAIFASRLGMSNKYAYDYACEDEYFEREMTLLDAKTAHLPIPVAMKHKSLPMDEVMPPHWNDVRFNFIPQNLDRRMFRPDTLPIFYDMHMDYHHGVGY
Ga0206689_1058632213300021359SeawaterNKSGVAPKALYRASRIGMTNKYAHDYACEDEYFEREMTLMDSKLQSLPLPTTWKHKELPMDDIMPLHWNDVRFNFLPQNIDRRMFLHDNLAILYDMHNDYYHGVGY
Ga0213861_1013114513300021378SeawaterMSQRLALSMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVDAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0213861_1036647813300021378SeawaterMSHPSRIALQMVLGRRATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHH
Ga0063086_102294613300021902MarineMVMKRTNGMVNPTMLVGCVAPKNAIFASRLGMSNKYAYDYACEDEYFEREMTLLDAKTAHLPIPVAMKHKSLPMDEVMPPHWNDVRFNFIPQNLDRRMFRPDTLPIFYDMHMDYHHGVGY
Ga0063086_106019313300021902MarineGMSNRYAYDYACQDEYFEREMTLLDAKTSHLPIPETVKHKSLPMDEVMPPHWNDVRFNFIPQNLDRRMFLHDTLPIFYDMHADYHHGVGY
Ga0222713_1032830523300021962Estuarine WaterMSKSLLLNMAFRRNNNIVVPKATFFAARLGMTNKYAYDYACEDEFFEREMTMLDAKLQTLPLPTTFKHKELPINEIYPAHWNDVRFNYLPQNLDRRAF
Ga0255777_1029144813300023175Salt MarshMSQRLALSMVMRRNSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKITSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFY
Ga0208866_100465823300025340FreshwaterMTNKYAYDYACEDEFFEREMTLLDAKLLSLPLPDNIRHKDAPTDELQPPHWNDVRFNYFPENIDRRCYIHDNLAIFYNMEHDYLHGVGF
Ga0208739_104781713300025426FreshwaterYAYDYACEDEFFEREMTLLDAKLLSLPLPDNIRHKDAPTDELQPPHWNDVRFNYFPENIDRRCYIHDNLAIFYNMEHDYLHGVGF
Ga0209654_104102623300025608MarineMVMRRSSCVVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0209771_104160923300025701MarineVPKSTLFASRLGMTNKYAYDYACEDEFFEREMTLLDAKTTSLPLPTDFKHVEAPTDEIQPPHWNDVRFNFFPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0209308_1015525413300025869Pelagic MarineMSHPSRIALQMVLGRRATCVVPKSTLFSSRLGMTNKYAHDYACEDEFFEREMTMLDAKITTLPLPTDFRHKEAPTDEIQPPHWNDVRFNFFPENLDRRCYIHDNLAIFYDMQNDYHHGVG
Ga0209308_1019444823300025869Pelagic MarineMSHPSRIAMQMVMGRRATCVVPKATLFSSRLGMTNKYAYDYACEDEFFEREMTMLDARTTHLPLPVDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDM
Ga0209425_1025368023300025897Pelagic MarineMSHPSRIAMQMVMGRRATCVVPKATLFSSRLGMTNKYAYDYACEDEFFEREMTLLDARTTHLPLPVDFKHVEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDM
Ga0208275_101140623300026182MarineMFNSIVPKSTIYATRLGMTNKYAYDYACEDEFFEREMTFLEARLMHLPIPDDFKHKELPIDEIYPPHWNDVRFNFHPENIDRRAFIHDNLVIFYNM
Ga0209617_1016355913300027720Freshwater And SedimentMSNKYAYDYACEDEFFEREMTLLDAKLMSLPLPENFRHKEAPVDELLPPHWNDVRFNYFPENIDRRCFIHDNLPIFYNMEHDYLHGVGF
Ga0209192_1014794913300027752MarineMGARSIRNSCITPRATIYAARIGMTNKYAFDYACEDEYHEREMTLADAKTMTLPLPDNFRHKSLPMDDYYPPHWNDVRFNHRQQNFDRRMFLHDNMAISYNM
(restricted) Ga0255057_1038106013300027997SeawaterMSQRLALSMVLRRNSCVVPKATLFASRLGMTNKYAYDYACEDEFFEREMTMLDAKVTTLPLPTDFKHVDAPTDEIQPPHWNDVRFNFLPQNLDRRCYVHDNLAIFYDMQNDYHHGVGY
Ga0247582_112608113300028109SeawaterNKYKFDYACEDEYFEREMTLMDAKDVMLPLPETWRHKTLPMHEYFPPHWNDVRFNYIPENIDRRMFLHDDLAVYYNMQHDYIHSVGC
Ga0256411_126685213300028134SeawaterMVMKRTNGMVNPSLFNGCVAPKNAIFASRLGMSNKYAHDYACEDEYFEREMTLLDAKTAHLPIPTSYKHKSLPMDEVMPPHWNDVRFNFIPQNLDRRMFLHDTLPIFYDMH
Ga0307398_1064398113300030699MarinePSRIAMQMVLGRRATCIVPKSTLFSTRLGMTNKYAHDYACEDEFFEREMTLLDARTMSLPLSEDFRHAEAPTDEIQPPHWNDVRFNFLPQNLDRRCYIHDNLAIFYDMQNDYHHGVGY
Ga0073978_157736513300031036MarineMGMSNKYAMDYACEDEFFEREMTMLDAKLTSLPLPTTWKHPDLPWNEIYPAHFNDVRFNFIPENLDRRAFIHDNLAIFYNMHADYYHGVGYQDEDMDYEMPDPYEGMH
Ga0307388_1035571513300031522MarineMVMKRTNGMVNPSLFNGCVAPKNAIFASRLGMSNKYAHDYACEDEYFEREMTLLDAKSAHLPIPETTRHKVLPMDEIMPPHWNDVRFNFIPQNLDRRMFLHDTLPIFYDMHMDYHHGVGY
Ga0307388_1079010633300031522MarineYANDYACEDEFFEREMTLLEAKETHLPLSDNFKHKSLPMDEYMPPHWNDVRFNFIPENIDRRCYIHDNLAIFYDMKNDYMHGVGF
Ga0307387_1043401733300031737MarineMKRTNGMVNPSLFNGCVAPKNAIFASRLGMSNKYAHDYACEDEYFEREMTLLDAKSAHLPIPETTRHKVLPMDEIMPPHWNDVRFNFIPQNLDRRMFLHDTLPIFYDMHMDYHHGVGY
Ga0307384_1054744513300031738MarineGNAFVTPNSRVFAARLGMTNKYAYDYACEDEYFEREMTLLDAKTMSLPLPVTFKHKEYPLHELYPPHWNDVRFNFKPENLDRRHFTHDNLPIFYNMQNDYHHGVGY
Ga0315907_1084509313300031758FreshwaterMTNKYAYDYACEDEFFEREMTLLDAKLLSLPLPENLRHKEAPTDELLPPHWNDVRFNYFPENIDRRCFIHDNLAIFYNMEHDYLHGVGF
Ga0314673_1030142813300032650SeawaterTRAKREGGVKMSHPSRIAMSMVLGRRATCIVPKSTMFSARLGMTNKYAFDYACEDEFFEREMTLLDARTTSLPLPDDFRHKEAPTDEIQPPHWNDVRFNFLPQNIDRRCYIHDNMAIFYDMQNDYHHGVGY
Ga0314687_1048665623300032707SeawaterVMGARSIRNSCITPRATIYAARIGMTNKYAFDYACEDEYHEREMTLADAKTMTLPLPDNFRHKSLPMDDYYPPHWNDVRFNHRQQNFDRRMFLHDNMAISYNM
Ga0314706_1054767713300032734SeawaterKMSHPSRIAMSMVLGRRATCIVPKSTMFSARLGMTNKYAFDYACEDEFFEREMTLLDARTTSLPLPDDFRHKEAPTDEIQPPHWNDVRFNFLPQNIDRRCYIHDNMAIFYDMQNDYHHGVGY
Ga0314704_1032025713300032745SeawaterMSHPSRIAMSMVLGRRATCIVPKSTMFSARLGMTNKYAFDYACEDEFFEREMTLLDARTTSLPLPDDFRHKEAPTDEIQPPHWNDVRFNFLPQNIDRRCYIHDNMAIFYDMQNDYHHGVG
Ga0314694_1025968523300032751SeawaterIAMSMVLGRRATCIVPKSTMFSARLGMTNKYAFDYACEDEFFEREMTLLDARTTSLPLPDDFRHKEAPTDEIQPPHWNDVRFNFLPQNIDRRCYIHDNMAIFYDMQNDYHHGVGY
Ga0314694_1028337333300032751SeawaterGARSIRNSCITPRATIYAARIGMTNKYAFDYACEDEYHEREMTLADAKTMTLPLPDNFRHKSLPMDDYYPPHWNDVRFNHRQQNFDRRMFLHDNMAISYNM
Ga0307390_1072289213300033572MarineMTNRWAYDYACEDEYHEKELTMLDARTIRLPLPVDFKKASPPWNEIYPVHAQNDVRFNFLPQNLDRRGFQHDNTVFFYNMHEEYHHGVGYEDEDMDFELPDPYADMH
Ga0334989_0282324_162_4313300033984FreshwaterMSNKYAYDYACEDEFFEREMTLLDAKLLSLPLPENFRHKEAPTDEIYPPHWNDVRFNYFPENIDRRCFIHDNLPIFYNMEHDYLHGIGF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.