Metagenome / Metatranscriptome Family F081340

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081340
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	46 residues
Representative Sequence	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED
Number of Associated Samples	72
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.26 %
% of genes near scaffold ends (potentially truncated)	20.18 %
% of genes from short scaffolds (< 2000 bps)	82.46 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (34.211 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (36.842 % of family members)
Environment Ontology (ENVO)	Unclassified (65.789 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.51% β-sheet: 17.57% Coil/Unstructured: 68.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
d.20.1.0: automated matches	d3fn1b_	3fn1	0.64407
d.304.1.1: TTHA1013-like	d1wv8a1	1wv8	0.63999
d.74.4.2: PH0730 C-terminal domain-like	d2p8ta2	2p8t	0.63112
d.20.1.1: UBC-related	d1y8xa1	1y8x	0.62604
c.55.7.1: Methylated DNA-protein cysteine methyltransferase domain	d1mgta2	1mgt	0.62215

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF11325	DUF3127	9.65
PF13619	KTSC	6.14
PF13481	AAA_25	2.63
PF02195	ParBc	2.63
PF10985	DUF2805	1.75
PF11753	DUF3310	1.75
PF02739	5_3_exonuc_N	0.88
PF02151	UVR	0.88
PF04404	ERF	0.88
PF14743	DNA_ligase_OB_2	0.88
PF05728	UPF0227	0.88
PF08279	HTH_11	0.88
PF03796	DnaB_C	0.88
PF08299	Bac_DnaA_C	0.88
PF01467	CTP_transf_like	0.88
PF03237	Terminase_6N	0.88
PF10400	Vir_act_alpha_C	0.88
PF00583	Acetyltransf_1	0.88
PF13392	HNH_3	0.88
PF01541	GIY-YIG	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.88
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.88
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.88
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.79 %
Unclassified	root	N/A	34.21 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	37.72 %
Unclassified	root	N/A	34.21 %
cellular organisms	root	All Organisms → cellular organisms	28.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	22.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.39 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.51 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	2.63 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	17.54 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	5.26 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.51 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.63 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	2.63 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	17.54 %
Candidatus Aenigmarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota	5.26 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.51 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.63 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	2.63 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	17.54 %
unclassified Aenigmarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.63 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.88 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
unclassified Bacteroides	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.58 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.54 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	5.26 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.63 %
Bacteroides sp. 51	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp. 51	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001347\|JGI20156J14371_10117985	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp. 51	806	Open in IMG/M
3300001348\|JGI20154J14316_10151025	Not Available	628	Open in IMG/M
3300001352\|JGI20157J14317_10053865	All Organisms → Viruses → Predicted Viral	1824	Open in IMG/M
3300006484\|Ga0070744_10022919	All Organisms → Viruses → Predicted Viral	1851	Open in IMG/M
3300006484\|Ga0070744_10030945	All Organisms → Viruses → Predicted Viral	1583	Open in IMG/M
3300006484\|Ga0070744_10249090	Not Available	502	Open in IMG/M
3300006750\|Ga0098058_1117425	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	713	Open in IMG/M
3300006752\|Ga0098048_1011294	All Organisms → Viruses → Predicted Viral	3144	Open in IMG/M
3300006752\|Ga0098048_1014928	Not Available	2671	Open in IMG/M
3300006752\|Ga0098048_1025846	Not Available	1934	Open in IMG/M
3300006752\|Ga0098048_1076430	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300006752\|Ga0098048_1195918	Not Available	596	Open in IMG/M
3300006752\|Ga0098048_1265911	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	500	Open in IMG/M
3300006789\|Ga0098054_1004762	Not Available	6017	Open in IMG/M
3300006789\|Ga0098054_1109394	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300006789\|Ga0098054_1179926	Not Available	775	Open in IMG/M
3300006789\|Ga0098054_1187766	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	756	Open in IMG/M
3300006789\|Ga0098054_1367040	Not Available	508	Open in IMG/M
3300006793\|Ga0098055_1064771	All Organisms → Viruses → Predicted Viral	1453	Open in IMG/M
3300006793\|Ga0098055_1078733	All Organisms → Viruses → Predicted Viral	1298	Open in IMG/M
3300006793\|Ga0098055_1096207	All Organisms → Viruses → Predicted Viral	1159	Open in IMG/M
3300006793\|Ga0098055_1099734	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300006793\|Ga0098055_1173858	Not Available	824	Open in IMG/M
3300006793\|Ga0098055_1191491	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	778	Open in IMG/M
3300006793\|Ga0098055_1313335	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	585	Open in IMG/M
3300006920\|Ga0070748_1186954	Not Available	761	Open in IMG/M
3300006922\|Ga0098045_1011137	All Organisms → Viruses → Predicted Viral	2541	Open in IMG/M
3300006922\|Ga0098045_1164764	Not Available	505	Open in IMG/M
3300006924\|Ga0098051_1053443	Not Available	1114	Open in IMG/M
3300006924\|Ga0098051_1084311	All Organisms → cellular organisms → Eukaryota	859	Open in IMG/M
3300006924\|Ga0098051_1123138	Not Available	691	Open in IMG/M
3300006990\|Ga0098046_1042435	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1081	Open in IMG/M
3300006990\|Ga0098046_1091995	Not Available	677	Open in IMG/M
3300007544\|Ga0102861_1155294	Not Available	622	Open in IMG/M
3300007552\|Ga0102818_1014656	All Organisms → Viruses → Predicted Viral	1548	Open in IMG/M
3300007953\|Ga0105738_1009461	All Organisms → Viruses → Predicted Viral	1225	Open in IMG/M
3300008050\|Ga0098052_1094246	All Organisms → Viruses → Predicted Viral	1226	Open in IMG/M
3300008050\|Ga0098052_1146518	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	937	Open in IMG/M
3300009002\|Ga0102810_1052411	All Organisms → Viruses → Predicted Viral	1308	Open in IMG/M
3300009002\|Ga0102810_1124677	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	797	Open in IMG/M
3300009002\|Ga0102810_1260071	Not Available	535	Open in IMG/M
3300009003\|Ga0102813_1258678	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	538	Open in IMG/M
3300009026\|Ga0102829_1033670	Not Available	1502	Open in IMG/M
3300009058\|Ga0102854_1125078	Not Available	736	Open in IMG/M
3300009058\|Ga0102854_1187442	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	593	Open in IMG/M
3300009076\|Ga0115550_1041757	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1941	Open in IMG/M
3300009447\|Ga0115560_1182167	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	821	Open in IMG/M
3300009450\|Ga0127391_1005403	Not Available	2818	Open in IMG/M
3300009466\|Ga0126448_1099963	Not Available	657	Open in IMG/M
3300009495\|Ga0115571_1112350	All Organisms → Viruses → Predicted Viral	1170	Open in IMG/M
3300009495\|Ga0115571_1133391	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300009507\|Ga0115572_10116579	All Organisms → Viruses → Predicted Viral	1589	Open in IMG/M
3300009507\|Ga0115572_10474661	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	695	Open in IMG/M
3300009599\|Ga0115103_1241102	All Organisms → cellular organisms → Bacteria	6407	Open in IMG/M
3300010149\|Ga0098049_1022352	All Organisms → Viruses → Predicted Viral	2078	Open in IMG/M
3300010149\|Ga0098049_1064184	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1163	Open in IMG/M
3300010149\|Ga0098049_1081359	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1019	Open in IMG/M
3300010150\|Ga0098056_1025479	All Organisms → Viruses → Predicted Viral	2089	Open in IMG/M
3300010150\|Ga0098056_1226637	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	621	Open in IMG/M
3300017752\|Ga0181400_1226374	Not Available	510	Open in IMG/M
3300017763\|Ga0181410_1115157	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	771	Open in IMG/M
3300020165\|Ga0206125_10020075	All Organisms → Viruses → Predicted Viral	4032	Open in IMG/M
3300020166\|Ga0206128_1009944	Not Available	6226	Open in IMG/M
3300020166\|Ga0206128_1068007	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300020166\|Ga0206128_1102498	All Organisms → Viruses → Predicted Viral	1235	Open in IMG/M
3300020166\|Ga0206128_1257119	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	639	Open in IMG/M
3300020182\|Ga0206129_10053153	All Organisms → Viruses → Predicted Viral	2510	Open in IMG/M
3300020182\|Ga0206129_10099385	All Organisms → Viruses → Predicted Viral	1534	Open in IMG/M
3300020185\|Ga0206131_10012256	Not Available	7784	Open in IMG/M
3300020185\|Ga0206131_10095700	All Organisms → Viruses → Predicted Viral	1727	Open in IMG/M
3300020347\|Ga0211504_1113145	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	606	Open in IMG/M
3300021085\|Ga0206677_10071900	All Organisms → Viruses → Predicted Viral	1713	Open in IMG/M
3300021185\|Ga0206682_10337749	Not Available	648	Open in IMG/M
3300021352\|Ga0206680_10312792	Not Available	610	Open in IMG/M
3300021371\|Ga0213863_10096627	All Organisms → Viruses → Predicted Viral	1421	Open in IMG/M
3300021957\|Ga0222717_10027716	Not Available	3758	Open in IMG/M
3300021957\|Ga0222717_10153267	All Organisms → Viruses → Predicted Viral	1401	Open in IMG/M
3300021957\|Ga0222717_10307140	Not Available	903	Open in IMG/M
3300023683\|Ga0228681_1044511	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	525	Open in IMG/M
3300023685\|Ga0228686_1002115	All Organisms → cellular organisms → Bacteria	2300	Open in IMG/M
3300023695\|Ga0228680_1007378	Not Available	1194	Open in IMG/M
3300024229\|Ga0233402_1053962	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	851	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10289383	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	711	Open in IMG/M
3300024294\|Ga0228664_1061919	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	878	Open in IMG/M
3300024313\|Ga0228624_1052973	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	802	Open in IMG/M
3300024319\|Ga0228670_1039582	All Organisms → Viruses → Predicted Viral	1108	Open in IMG/M
3300024329\|Ga0228631_1047384	All Organisms → Viruses → Predicted Viral	1176	Open in IMG/M
3300024346\|Ga0244775_10000633	Not Available	42705	Open in IMG/M
3300024346\|Ga0244775_10035068	Not Available	4443	Open in IMG/M
3300025070\|Ga0208667_1001837	Not Available	7374	Open in IMG/M
3300025070\|Ga0208667_1036333	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	853	Open in IMG/M
3300025083\|Ga0208791_1048780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	744	Open in IMG/M
3300025084\|Ga0208298_1018407	All Organisms → Viruses → Predicted Viral	1580	Open in IMG/M
3300025084\|Ga0208298_1038944	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	963	Open in IMG/M
3300025098\|Ga0208434_1011162	All Organisms → Viruses → Predicted Viral	2467	Open in IMG/M
3300025103\|Ga0208013_1111441	Not Available	682	Open in IMG/M
3300025108\|Ga0208793_1068847	Not Available	1046	Open in IMG/M
3300025108\|Ga0208793_1107090	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	777	Open in IMG/M
3300025645\|Ga0208643_1051132	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1267	Open in IMG/M
3300025849\|Ga0209603_1074525	All Organisms → Viruses → Predicted Viral	1629	Open in IMG/M
3300025849\|Ga0209603_1114661	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300025876\|Ga0209223_10139672	Not Available	1259	Open in IMG/M
3300025880\|Ga0209534_10103606	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1612	Open in IMG/M
3300026437\|Ga0247577_1014733	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1630	Open in IMG/M
3300026460\|Ga0247604_1035909	Not Available	1198	Open in IMG/M
3300026466\|Ga0247598_1120526	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	651	Open in IMG/M
3300027183\|Ga0208798_1000219	Not Available	9332	Open in IMG/M
3300027206\|Ga0208023_1074465	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	541	Open in IMG/M
3300027320\|Ga0208923_1075295	Not Available	598	Open in IMG/M
3300027858\|Ga0209013_10048902	Not Available	2976	Open in IMG/M
3300028008\|Ga0228674_1113618	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	933	Open in IMG/M
3300028133\|Ga0228609_1049772	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300028598\|Ga0265306_10121360	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1358	Open in IMG/M
3300032373\|Ga0316204_10755424	Not Available	701	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.25%
Unclassified	Environmental → Aquatic → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	36.84%
Coastal	Environmental → Aquatic → Marine → Coastal	15.79%
Pelagic	Environmental → Aquatic → Marine → Pelagic	14.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	13.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.77%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.39%
Strait	Environmental → Aquatic → Marine → Strait	1.75%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.75%
Inlet	Environmental → Aquatic → Marine → Inlet	0.88%
Oil Seeps	Environmental → Aquatic → Marine → Oil Seeps	0.88%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	36.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	14.91%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	10.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.77%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.88%
Unclassified	Environmental → Aquatic → Marine → Oil Seeps → Unclassified	0.88%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	0.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.84%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	12.28%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	10.53%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	7.89%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	7.02%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.39%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.39%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.63%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.63%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.75%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.75%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	1.75%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.88%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.88%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.88%
Marine	Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine	0.88%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007552	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571	Environmental	Open in IMG/M
3300007953	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3um	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009002	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009466	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300023683	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 22R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023685	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023695	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 21R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024229	Seawater microbial communities from Monterey Bay, California, United States - 54D	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024294	Seawater microbial communities from Monterey Bay, California, United States - 78D	Environmental	Open in IMG/M
3300024313	Seawater microbial communities from Monterey Bay, California, United States - 29D	Environmental	Open in IMG/M
3300024319	Seawater microbial communities from Monterey Bay, California, United States - 85D	Environmental	Open in IMG/M
3300024329	Seawater microbial communities from Monterey Bay, California, United States - 39D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300026437	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 34R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026460	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026466	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 70R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027183	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571 (SPAdes)	Environmental	Open in IMG/M
3300027206	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027858	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028598	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)	Environmental	Open in IMG/M
3300032373	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20156J14371_101179852	3300001347	Pelagic Marine	MKYKEYEIDTKGNGYGYFEATSLNDCDANIIYANTIEKVKAEIDELYLD*
JGI20154J14316_101510253	3300001348	Pelagic Marine	MIYKDYEIMEYQNGWGYFEAVNLNDCDDKILFANTIEKLKIEIDELNK*
JGI20157J14317_100538653	3300001352	Pelagic Marine	MVYKNYDIDTEDNGWGYFEATNLDDCDAPMLFANTIEKLIIEINEN*
Ga0070744_100229194	3300006484	Estuarine	MVYKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN*
Ga0070744_100309451	3300006484	Estuarine	MVYKNYDIDTEDNGWGYFEATNLNDCDVPILFANTIEKLIIEID
Ga0070744_102490902	3300006484	Estuarine	MVYKNYDIDTQSNDWNYFEAINLDDCDAPILFANTIEKLIIEIDEN*
Ga0098058_11174252	3300006750	Marine	MKYKNYDIDTQDNGWGYFEGTNLDDCDAPILFANTIEKLKIEIDED*
Ga0098048_10112941	3300006752	Marine	MIYKDYEIMEYQNSWGYFEAVNLKDCDDKILFANTIEKLKIEIDELNY
Ga0098048_10149286	3300006752	Marine	MIYKDYEIMEYQNGWGYFEAVNLKDCDDKILFANTIEKLKIEIDELNY*
Ga0098048_10258464	3300006752	Marine	MNYKGYEIDQQGNGWGYFEAINTNDCDAPLIFANTVEKLKIEIDEINGDE*
Ga0098048_10764301	3300006752	Marine	MVYKNYDIDTEGNGWGYFEATNRNDCDAPILFANTIEKLIIEIN
Ga0098048_11959182	3300006752	Marine	MIKYKGYEIDRQGNSWGYFEAINTNDCDAPIIFADSVEKVLIEIDEHHA*
Ga0098048_12659112	3300006752	Marine	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED*
Ga0098054_10047622	3300006789	Marine	MVYKNYDIDTEGNGWGYFEATNLNDCYAPILFANTIEKLKIEIDED*
Ga0098054_11093942	3300006789	Marine	MKYKNYNIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED*
Ga0098054_11799264	3300006789	Marine	MIKYKGYEIDQQGNGWGYYEATNTNDCDAPIIYADSVEKVIIEIDEHHA*
Ga0098054_11877662	3300006789	Marine	MKYKNYDIDMQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED*
Ga0098054_13670402	3300006789	Marine	MNYKGYEIDQQGNGWGYFEAINTNDCDAPIIFANTVEKVKIEIDEINGDE*
Ga0098055_10647713	3300006793	Marine	MKYKNYDIDTEDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED*
Ga0098055_10787333	3300006793	Marine	MVYKNYDIDTQDNGWGYFEATSIVDCDAPILFANTIEKLIIEINEN*
Ga0098055_10962075	3300006793	Marine	MVYKNYDIDTEGNGWGYFEATNLNDCDAPILFANTIEKLIIEINEN*
Ga0098055_10997343	3300006793	Marine	MNYREYEIDTQGNGYGYFEATSINDCDAPIIFANTIEKVKVEIDELYID*
Ga0098055_11738582	3300006793	Marine	MVYKNYDIDIQDNGWGYFEAISLVDCDAPILFASTIEKLIIEIDENKKTNST*
Ga0098055_11914912	3300006793	Marine	MKYKNYDIDTQDNEWGYFEAINLDDCDAPILFANTIEKLKIEIDED*
Ga0098055_13133352	3300006793	Marine	MNYKGYEIDTQENGYGYFEAISTDCDAPIIFANTIEKVKVEIDEFYID*
Ga0070748_11869542	3300006920	Aqueous	MVYKNYDIDTQSNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN*
Ga0098045_101113710	3300006922	Marine	MIYKDYEIMEYQNGWGYFEAVNLKDCDDKILFANTIEKLKIEIDEL
Ga0098045_11647643	3300006922	Marine	EIMEYQNGWGYFEAVNLKDCDDKILFANTIEKLKIEIDELNY*
Ga0098051_10534431	3300006924	Marine	DQQGNGWGYFEAINTNDCDAPIIFANTVEKVKIEIDEINGDE*
Ga0098051_10843111	3300006924	Marine	MNYKGYEIYQQGNGWGYFEAINTNDCDAPIIFANTVEKVK
Ga0098051_11231384	3300006924	Marine	MIRYKGYEIDQQGNGWGYYEATNTNDCDAPIIYADSVEKVIIEIDEHHA*
Ga0098046_10424351	3300006990	Marine	REMIKYKGYEIDRQGNSWGYFEAINTNDCDAPIIYADSVEKVIIEIDEHHT*
Ga0098046_10919952	3300006990	Marine	MIKYKGYEIDRQGNSWGYFEAINTNDCDAPILFANSVEKLIIEIDEKE*
Ga0102861_11552942	3300007544	Estuarine	MVYKNYDIDTQNNGWGYFEATSLVDCDAPILFANTIEKLIIEINEN*
Ga0102818_10146562	3300007552	Estuarine	VVYKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN*
Ga0105738_10094611	3300007953	Estuary Water	MNYKEYEIDTQGNGYGYFEATSINDCDAPIIFANTIEKVKVEIDELYIE*
Ga0098052_10942463	3300008050	Marine	MNYKGYEIDTQENGYGYFEAISTDCDAPIIFANTIEKVKVEIDELYID*
Ga0098052_11465182	3300008050	Marine	MNYREYEIDTQGNGYGYFEATSLNDCDAPIIFANTIEKVKVEIDELYIN*
Ga0102810_10524112	3300009002	Estuarine	MVYKNYDIDTEDNGWGYFEATNLNDCDVPILFANTIEKLIIEIDNNSN*
Ga0102810_11246773	3300009002	Estuarine	MNYREYEIDAQGNGYGYFEATSINDCDAPIIFANTIEKVKVEIDELYID*
Ga0102810_12600712	3300009002	Estuarine	MVYKNYDIDTQSNDWGYFEAINLDNCDAPILFANTIEKLIIEIDEN*
Ga0102813_12586782	3300009003	Estuarine	MVYKNYDIDTQSNDWNYFEAINLDNCDAPILFANTIEKLIIEIDEN*
Ga0102829_10336703	3300009026	Estuarine	MKQIYKGYSIDDVANEWGYFEAINTEDCDAVIIICNTLEKLIIEIDELE*
Ga0102854_11250782	3300009058	Estuarine	MIYKNYEIMEYQNGWGYYEAVNLNDCDDKILFANTIEKLKIEIDELK*
Ga0102854_11874422	3300009058	Estuarine	MNYKEYEIDTQGNGYGYFEATSINDCDAPIIFANTIEKVKVEIDELYID*
Ga0115550_10417571	3300009076	Pelagic Marine	QNGWGYFEAVNLNDCDDKILFANTIEKLKIEIDELNK*
Ga0115560_11821673	3300009447	Pelagic Marine	MKYKEYEIDTQGNGYGYFEATSLNDCDAPIIFANT
Ga0127391_10054035	3300009450	Meromictic Pond	MKQIYKGYEISTKPNEWGYFEAISTKDCDAPTITAKTIRQLKVEIDDLDF*
Ga0126448_10999632	3300009466	Meromictic Pond	MKKIYKGYEISTKPNEWGYFEAISTKDCDAPTITAKTIRQLKVEIDDLDF*
Ga0115571_11123502	3300009495	Pelagic Marine	MKYKEYEIDTQGNGYGYFEATSLNDCDAPIIFANTVEKVKVEIDELYLD*
Ga0115571_11333912	3300009495	Pelagic Marine	MNYKEYEIGTKGNGYGYFEATSLNDCDAPIIFANTVEKVKVEIDELYLD*
Ga0115572_101165792	3300009507	Pelagic Marine	MNYKEYEIDTKGNGYGYFEATSLNDCDAPIIFANTIEKVKVEIDEIRNSI*
Ga0115572_104746612	3300009507	Pelagic Marine	MNYKEYEIDTQGNGYGYFEATSLNDCDAPIIFANTVEKVKVEIDELYLD*
Ga0115103_12411021	3300009599	Marine	MIKYKGYEIDQQGNGWGYYEAINTNDCDAPIIFADSVEKVLIEINEQHA*
Ga0098049_10223524	3300010149	Marine	MVYKNYNIDTEGNGWGYFEATNLNDCDAPILFANTIEKLIIEINEN*
Ga0098049_10641843	3300010149	Marine	MIKYKGYEIDRQGNGWGYYEATNTNDCDAPIIYANSVEKVIIEIDEHHA*
Ga0098049_10813593	3300010149	Marine	MKYKNYDIDMQDNGWGYFEATNLDDCYAPILFANTIEKLKIEIDED*
Ga0098056_10254795	3300010150	Marine	MVYKNYDIDTQDNGWGYFEATSIVDCDAPILFANTIEKLIIEIKEN*
Ga0098056_12266372	3300010150	Marine	MIKYKGYEIDQQGNGWGYYEAINTNDCDAPIIFADSVEKVIIEINEK*
Ga0181400_12263742	3300017752	Seawater	MVYKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLIIEINEN
Ga0181410_11151572	3300017763	Seawater	MVYKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLIIEI
Ga0206125_100200753	3300020165	Seawater	MVYKNYDIDTEDNGWGYFEATNLDDCDAPMLFANTIEKLIIEINEN
Ga0206128_100994412	3300020166	Seawater	MVYKNYDIDTEDNRWGYFEATNLVDCDAPILFANTIEKLIIEINEN
Ga0206128_10680073	3300020166	Seawater	MVYKNYDIDTQSNDWGYFEAINLNDCDAPILFANTIEKLIIEIDEN
Ga0206128_11024982	3300020166	Seawater	MKYKEYEIDTQGNGYGYFEATSLNDCDANIIYANTIEKVKVEIDELYLD
Ga0206128_12571192	3300020166	Seawater	MKYKEYEIDTQGNGYGYFEATSLNDCDAPIIFANTVEKVKVEIDELYLD
Ga0206129_100531532	3300020182	Seawater	MIYKDYEIMEYQNGWGYFEAVNLNDCDDKILFANTIEKLKIEIDELNK
Ga0206129_100993853	3300020182	Seawater	MNYKEYEIDTKGNGYGYFEATSLNDCDANIIYANTIEKVKAEIDELYLD
Ga0206131_100122563	3300020185	Seawater	MVYKNYDIDTEDNGWGYFEATNLDNCDAPMLFANTIEKLIIEINEN
Ga0206131_100957005	3300020185	Seawater	MVYKNYDIDTEDNRWGYFEATNLVDCDAPILFANTIEKLIIEIDEN
Ga0211504_11131452	3300020347	Marine	MVYKNYDIETKDNGWGYFEATNLNDCDAPILFANTIEKLIIEINEN
Ga0206677_100719003	3300021085	Seawater	MVYKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN
Ga0206682_103377492	3300021185	Seawater	MIKYKGYEIDQQGNGWGYYEAINTNDCDAPIIFAD
Ga0206680_103127923	3300021352	Seawater	NNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN
Ga0213863_100966272	3300021371	Seawater	MNYREYEIDTQGNGYGYFEATSLNDCDAAIIYANTIEKVKLEIDEFYLD
Ga0222717_100277167	3300021957	Estuarine Water	MIKYKGYEIDQQGNGWGYYEAINTNDCDAPIIFADSVEKVLIEINEQHA
Ga0222717_101532672	3300021957	Estuarine Water	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTVEKLIIEINEN
Ga0222717_103071404	3300021957	Estuarine Water	MIYKDYEIMEYQNGWGYYEAVNLNDCDDKILFANTIEKLKIEIDELNN
Ga0228681_10445112	3300023683	Seawater	MKFKNYDIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED
Ga0228686_10021155	3300023685	Seawater	MIKYKGYEIDQQGNGWGYFEAINTNDCDAPIIFANKVEKVKIEIDEKNNGKSI
Ga0228680_10073781	3300023695	Seawater	MIKYKGYEIDQQGNGWGYFEAINTNDCDAPIIFANTVEKVKIEIDEKNNGKSI
Ga0233402_10539622	3300024229	Seawater	MKYKNYDIDAQDNGWGYFEAINLDDCDAPILFANTIEKLKIEID
(restricted) Ga0233444_102893832	3300024264	Seawater	MVYKNYDIDTQDNRWGYFEATNLDDCDAPILFANTIEKLIIEIDEK
Ga0228664_10619193	3300024294	Seawater	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEI
Ga0228624_10529732	3300024313	Seawater	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTVEKSIIEINEN
Ga0228670_10395822	3300024319	Seawater	MNYREYEIDTQGNGYGYFEATSINDCDAPIIFANTIEKVKVEIDELYID
Ga0228631_10473841	3300024329	Seawater	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIE
Ga0244775_1000063336	3300024346	Estuarine	MVYKNYDIDTQSNDWNYFEAINLDDCDAPILFANTIEKLIIEIDEN
Ga0244775_100350688	3300024346	Estuarine	MVYKNYDIDTEDNGWGYFEATNLNDCDVPILFANTIEKLIIEIDDSSN
Ga0208667_100183718	3300025070	Marine	MIYKDYEIMEYQNGWGYFEAVNLKDCDDKILFANTIEKLKIEIDELNY
Ga0208667_10363333	3300025070	Marine	YEIDRQGNSWGYFEAINTNDCDAPIIYADSVEKVIIEIDEHHT
Ga0208791_10487802	3300025083	Marine	MNYKGYEIDQQGNGWGYFEAINTNDCDAPIIFANTVEKVKIEIDEINGDE
Ga0208298_10184073	3300025084	Marine	MVYKNYDIDTQDNGWGYFEATSIVDCDAPILFANTIEKLIIEINEN
Ga0208298_10389442	3300025084	Marine	MKYKNYDIDTEDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED
Ga0208434_10111621	3300025098	Marine	MIKYKGYEIDQQGNGWGYYEATNTNDCDAPIIYADSVEKVIIEIDEHHA
Ga0208013_11114413	3300025103	Marine	MIKYKGYEIDRQGNSWGYFEAINTNDCDAPIIYADSVEKVIIEIDEHHA
Ga0208793_10688471	3300025108	Marine	MVYKNYDIDTEGNGWGYFEATNLNDCDAPILFANTIEKLIIEINEN
Ga0208793_11070902	3300025108	Marine	MKYKNYDIDTQDNEWGYFEAINLDDCDAPILFANTIEKLKIEIDED
Ga0208643_10511322	3300025645	Aqueous	MVYKNYDIDTQSNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN
Ga0209603_10745252	3300025849	Pelagic Marine	MKYKEYEIDTQGNGWGYFEATSLNDCDANIIYANTIEKVKAEIDELYLD
Ga0209603_11146611	3300025849	Pelagic Marine	MNYKEYEIDTKGNGYGYFEATSLNDCDAPIIFANTIEKVKVEIDEIRNSI
Ga0209223_101396722	3300025876	Pelagic Marine	MKYKEYEIDTKGNGYGYFEATSLNDCDANIIYANTIEKVKAEIDELYLD
Ga0209534_101036062	3300025880	Pelagic Marine	MVYKNYDIDTQSNDWGYFEATSLVDCDAPILFANTIEKLIIEINEN
Ga0247577_10147331	3300026437	Seawater	QGNGWGYFEAINTNDCDAPIIFANTVEKVKIEIDEKNNGKSI
Ga0247604_10359091	3300026460	Seawater	DTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED
Ga0247598_11205262	3300026466	Seawater	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANTIEKLKIEIDED
Ga0208798_10002193	3300027183	Estuarine	MVYKNYDIDTQSNDWNYFEAINLDNCDAPILFANTIEKLIIEIDEN
Ga0208023_10744652	3300027206	Estuarine	MNYKEYEIDTQGNGYGYFEATSINDCDAPIIFANTIEKVKVEIDELYID
Ga0208923_10752951	3300027320	Estuarine	MKQIYKGYSIDDVANEWGYFEAINTEDCDAVIIICNTLEKLIIEIDELE
Ga0209013_100489022	3300027858	Marine	MVYKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLITGFN
Ga0228674_11136183	3300028008	Seawater	MKYKNYDIDTQDNGWGYFEATNLDDCDAPILFANT
Ga0228609_10497724	3300028133	Seawater	MKYKNYDIDAQDNGWGYFEAINLDDCDAPILFANTIEKLKIEIDED
Ga0265306_101213601	3300028598	Sediment	MVYKNYDIDTEDNRWGYFEATNLVDCDAPILFANTI
Ga0316204_107554241	3300032373	Microbial Mat	YKNYDIDTQNNGWGYFEAINLDNCDAPILFANTIEKLIIEIDEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters