NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081306

Metagenome / Metatranscriptome Family F081306

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081306
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 80 residues
Representative Sequence LPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQ
Number of Associated Samples 103
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.95 %
% of genes near scaffold ends (potentially truncated) 98.25 %
% of genes from short scaffolds (< 2000 bps) 95.61 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.368 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(23.684 % of family members)
Environment Ontology (ENVO) Unclassified
(27.193 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.035 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112
1JGI10216J12902_1217534181
2C688J18823_104294101
3C688J35102_1180555421
4Ga0062595_1001984151
5Ga0062592_1002702921
6Ga0066683_105910222
7Ga0065705_102842313
8Ga0070683_1012572362
9Ga0066388_1044058361
10Ga0070673_1017882721
11Ga0070711_1014102012
12Ga0066687_106920161
13Ga0070678_1002768672
14Ga0070662_1006780774
15Ga0070693_1000927653
16Ga0066661_105347434
17Ga0066698_109508532
18Ga0066699_103340581
19Ga0066699_103529873
20Ga0066694_103763351
21Ga0066654_101590963
22Ga0066654_106397522
23Ga0068856_1022491452
24Ga0070702_1007925181
25Ga0068870_108580292
26Ga0066651_102600983
27Ga0066651_106389431
28Ga0066696_108249952
29Ga0075417_103738102
30Ga0074059_118449602
31Ga0074054_121473112
32Ga0074057_100523002
33Ga0074062_115469232
34Ga0066710_1023267851
35Ga0105243_126521782
36Ga0105242_120871892
37Ga0105074_10614433
38Ga0126309_109001531
39Ga0126384_117234042
40Ga0134070_103263661
41Ga0134088_106409291
42Ga0134111_103814653
43Ga0134080_103722011
44Ga0134063_102377932
45Ga0134066_104459751
46Ga0134125_104247313
47Ga0134128_114587341
48Ga0134126_103717293
49Ga0134121_114312801
50Ga0138514_1000355621
51Ga0137392_104021741
52Ga0120174_10069915
53Ga0137364_103878883
54Ga0137374_101715302
55Ga0137381_101606023
56Ga0137376_101940884
57Ga0137379_103560272
58Ga0137368_103425132
59Ga0150984_1190100912
60Ga0164299_102436251
61Ga0164301_100779932
62Ga0164302_104357451
63Ga0134076_103797572
64Ga0134087_101555502
65Ga0164308_115924661
66Ga0164306_117251302
67Ga0157372_131847092
68Ga0120125_11055472
69Ga0167629_11519611
70Ga0184608_102307653
71Ga0184608_103682271
72Ga0187787_103070191
73Ga0184620_100029196
74Ga0184619_100341961
75Ga0066655_107922641
76Ga0066667_109798481
77Ga0066662_118666783
78Ga0193730_10523382
79Ga0193721_10366043
80Ga0182009_105006241
81Ga0207710_107818902
82Ga0207688_110394682
83Ga0207663_116364812
84Ga0207686_100170337
85Ga0207640_106871143
86Ga0207677_108091442
87Ga0207683_121174791
88Ga0207683_121384451
89Ga0209027_13168111
90Ga0209238_12609882
91Ga0209808_11480972
92Ga0209474_105088452
93Ga0209178_13597591
94Ga0307291_11972581
95Ga0307303_100547111
96Ga0307317_101047931
97Ga0307315_100661132
98Ga0307280_102709521
99Ga0307323_101516571
100Ga0307302_102140891
101Ga0307302_106640642
102Ga0307296_104655163
103Ga0307310_101176651
104Ga0307310_101557081
105Ga0307310_107174992
106Ga0307312_108509442
107Ga0307289_103077872
108Ga0307277_100488922
109Ga0307277_101226111
110Ga0307277_105848471
111Ga0307308_100546165
112Ga0307308_102446492
113Ga0307304_103263171
114Ga0307471_1042127262
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 59.81%    β-sheet: 0.00%    Coil/Unstructured: 40.19%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070LPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
97.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Glacier Forefield Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Permafrost
Soil
Grasslands Soil
Hardwood Forest Soil
Tropical Peatland
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Groundwater Sand
Soil
Corn Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
3.5%23.7%4.4%6.1%3.5%7.0%13.2%5.3%3.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_12175341813300000956SoilMQEPLDFALIKRLREVLDERPATETELRTLKEQAEAWARTISGQLESSERRIRRLNQNPASSLAQIASE
C688J18823_1042941013300001686SoilMPDPLDFALIKRLREVLDRRPATETELRTLKEQAEAWELTVNGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVRSLLADLEDR
C688J35102_11805554213300002568SoilMPEPLDFALIKRLREVLDRRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASEL
Ga0062595_10019841513300004479SoilMAEPLDFALTRRLREVLDRRPATESELRTLKEQAEAWQRTVSGQIEASERRLLRLNANPASSLA
Ga0062592_10027029213300004480SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVGGQIESSERRIRRLEQNPASSLAQIASELR
Ga0066683_1059102223300005172SoilMPEPLDFALIKRLREVLDDRPATESELRLLKEQAEAWARTVSGQLESSERRIRRLNQNPSSSLAQIASELRRVEQLRPQLNEVRDLLADLE
Ga0065705_1028423133300005294Switchgrass RhizosphereMPEPLDFALIKRLREVLDDRRTTESELRSLSEQAEAWARTISGQIESSERRIRRLNENPASSLAQIASELRRVEHLRPQLNEVRRLIDGLERR
Ga0070683_10125723623300005329Corn RhizosphereMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSASSLAQIASELR
Ga0066388_10440583613300005332Tropical Forest SoilMAPPLDFALIKRLREVLDDRPATEAELRTLSEQADAWARTVGGQLESSERRIQRLEQNPASSLAQIAAE
Ga0070673_10178827213300005364Switchgrass RhizosphereMAPPLDFALIKRLREVLDDQPATEAELRSLSEQADAWARTVNGQIESSERRILRLNQNPGSS
Ga0070711_10141020123300005439Corn, Switchgrass And Miscanthus RhizosphereMSEPLDFALIKRLREVLEDRPATESELRTLKEQSEAWARTVGGQIESSERRIRRLEQNPSSSLAQIAAELR
Ga0066687_1069201613300005454SoilMPESLDFALIKRLREVLDSRPPTEAELRSLTEQAEAWALTLNGQVESSERRIRRLNQNP
Ga0070678_10027686723300005456Miscanthus RhizosphereMAPPLDFALIKRLREVLDDQPATEAELRSLSEQADAWARTVHGQIESSERRILRLNQNPGSSLAQIAAELRRVEQLRPQLHEVRRLQADL
Ga0070662_10067807743300005457Corn RhizosphereMAEPLDFALIRRLREVRDSRPATEAELRALTEQAEAWARTVSSQIEASERRIRRLSENPGSSLAQIAEELRRVERL
Ga0070693_10009276533300005547Corn, Switchgrass And Miscanthus RhizosphereMPELDFALIKRLREVLDHRPATETELRALKEQAEAWELTVTGQMEASERRLRRLNASPASSLAQIASE
Ga0066661_1053474343300005554SoilMPESLDFALIKRLREVLDSRPPTEAELRSLTEQAEAWALTLNGQVESSERRIRRLNQNPASSLAQIAGE
Ga0066698_1095085323300005558SoilMPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIA
Ga0066699_1033405813300005561SoilMPDPLELTLIKRLREVRDRRPATESELRTLKEQAEGWARAVSGQISSSERRIRRLTANPASSLA
Ga0066699_1035298733300005561SoilVAERPDFALIKRLRQVLRDEPATETELRSLSEQADGWARALDAQVQASERRLRELNADPLSPLSEAASELRRIETLRPQLDEI
Ga0066694_1037633513300005574SoilMQKPLDFALIKRLREVLDDRPATESELRTLSEQADAWARTVGGQLESSERRIKRLEQNPASSLAQIASELRRVEQLRPQLHEVRQLQGD
Ga0066654_1015909633300005587SoilMSELDFALINRLQEVLDRRPATEAELRSLKEQAEGWERALSGQLESSERRLRRLNANSASSLAQIASELRRVEKLRPQLIEVRSLL
Ga0066654_1063975223300005587SoilMPEPLDFALIERLREVLDSRPPTEAELRSLNEQAEAWARTLNGQIESSERRIRRLNQNPASSLAQIAAELRRVERLRPQLNEVRSLLAELEQR
Ga0068856_10224914523300005614Corn RhizosphereMAPPLDFALIKRLREVLDDQPATEAELRSLSEQADAWARTVHGQIESSERRILRLNQNPGSSLAQIAAELR
Ga0070702_10079251813300005615Corn, Switchgrass And Miscanthus RhizosphereMSEPLDFALIKRLREVLEDRPATESELRTLKEQSEAWARTVGGQLESSERRIRRLEQNPSSSLAQIAAELRRVEQLRPQLAEVR
Ga0068870_1085802923300005840Miscanthus RhizosphereMPELDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVNGQMEASERRLRRLNASPASSLAQIASELRRVEKLR
Ga0066651_1026009833300006031SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVSGQIESSERRIRRLEQNPASSLAQIASELRRV
Ga0066651_1063894313300006031SoilMPHTLDFALIKRLREVLDKRPATESELRTLKEQAEAWARTISGQLESSERRLRRLNQNPASSLATIASELR
Ga0066696_1082499523300006032SoilMPEPLDFALIERLREVLDSRPPTEAELRSLNEQAEAWARTLNGQIESSERRIRRLNQNPASSLAQIAAELRRVERLRPQLNEVRSLLAELEQ
Ga0075417_1037381023300006049Populus RhizosphereMPPSLDFTLIRRLREVRDRASPATESELRVLTEQAEAWARTVDGQLQSSERRIRRLSADPASSLSNIAAELRRVE
Ga0074059_1184496023300006578SoilMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSASSLAQIASELRR
Ga0074054_1214731123300006579SoilMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLD
Ga0074057_1005230023300006605SoilMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVRSL
Ga0074062_1154692323300006606SoilMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSASSLAQIASELRRVEKL
Ga0066710_10232678513300009012Grasslands SoilMPDQLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVNGQLQASERRLLRLNANPASSLAQIASELRRVEKLRPQLD
Ga0105243_1265217823300009148Miscanthus RhizosphereMPELDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVR
Ga0105242_1208718923300009176Miscanthus RhizosphereLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRPRRLNANPASSLAQIA
Ga0105074_106144333300010029Groundwater SandMPQPLDFVLIRRLRQVMDTRATETELRTLKEQAEAWALTVSGQIQASERRIRRLNANPASSLAQIA
Ga0126309_1090015313300010039Serpentine SoilVRDRLDFALMKRLRALRDDLPATESELRALSEQAEAWARTVGGQLESSERRLQRLNENPASSLAQIANELRRVEQLRPELDEVRTL
Ga0126384_1172340423300010046Tropical Forest SoilMAPPLDFALIKRLREVLDDRPATEAELRALSEQADAWARTVSGQLESSERRIHRLEQNPASSLAQIADELRRVER
Ga0134070_1032636613300010301Grasslands SoilMPDPLDFALIKRLREVLDDRPATETELRMLKEQAEAWERTIGSQLESSERRIRRLNQNPASSLAQIAGELRRVETLRPQLDEVRR
Ga0134088_1064092913300010304Grasslands SoilLPEPLDFALILRLREVLDRRPATEAELRSLKEQAEGWERALGGQLESSERRLQRLNANPASSLAQLASELRRVEKLRPQLDEVRSLLGDLENRARE
Ga0134111_1038146533300010329Grasslands SoilMPETLDFALIKRLREVLDDRPATETELRMLKEQAEAWERTIGSQLESSERRIRRLNQNPASSLAQIAGELRRVETLRPQ
Ga0134080_1037220113300010333Grasslands SoilMPEPLDFALITRLREVLDDRPATESELRTLKEQAEAWALTVSGQIESSERRIRRLNQNPASSLAQLASELRRVEQLRPQ
Ga0134063_1023779323300010335Grasslands SoilLPEPLDFALILRLREVLDRRPATEAELRSLKEQAEGWERALGGQLESSERRLRRLNANPASSLAQLASELRRVEKLRPQLDE
Ga0134066_1044597513300010364Grasslands SoilMYVPLDFALIKRLREVLDDRPATESELRALKEQAEAWALTVSGQIESSERRLRRLNQNPASSLAQLASE
Ga0134125_1042473133300010371Terrestrial SoilMPEPLELALIKRLREVLDDRPATESELRALGEQAEAWARAISAQIASSERRIQRLNQNPGSSLA
Ga0134128_1145873413300010373Terrestrial SoilMSQLDFALINRLQEVLDRRPATEAELRSLKEQAEGWERALGGQLESSERRLRRLNANPASSLAQIASELRRVER
Ga0134126_1037172933300010396Terrestrial SoilMPEPLDFALIKRLREVLDHRPATETELRALKEQAEAWELTVTGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVRSLLADLE
Ga0134121_1143128013300010401Terrestrial SoilMSEPLDFALIKRLREVLEDRPATESELRTLKEQSEAWARTVGGQLESSERRIRRLEQNPSSSLAQIAAE
Ga0138514_10003556213300011003SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVGGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLEEVGSLLGDLEN
Ga0137392_1040217413300011269Vadose Zone SoilMPEPLDFALIKRLREVRDRLPATETELRTLKEQAEGWQRAVNGQLQASERRLRRLNANPASSLAQIAAELRRVEKLRPQL
Ga0120174_100699153300012008PermafrostMPEPLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLQSSERRLRRLNANPASSLAQIASELRRVERLRPQLDQVRSLLGDLESAARSPACRAACLRTD
Ga0137364_1038788833300012198Vadose Zone SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVSGQIESSERRIRRLEQNPASSLAQIA
Ga0137374_1017153023300012204Vadose Zone SoilMPEPLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLQASERRLRRLNANPASSLAQIASELRRVEKLRPQLDEVRSLLGDLENRSRE
Ga0137381_1016060233300012207Vadose Zone SoilLPEPLDFALIRRLREILDHRPATETELRTLKEQAEGWQRAVSGQLEASERRLLRLNANPASSLAQIAGELRRVE
Ga0137376_1019408843300012208Vadose Zone SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVSGQIESSERRIRRLEQNPASSLAQIASELRRVEQLR
Ga0137379_1035602723300012209Vadose Zone SoilLPEPLDFALILRLREVLDRRPATEAELRSLKEQAEGWERALGGQLESSERRLQRLNANPASSLAQIASELRRVEKLRP
Ga0137368_1034251323300012358Vadose Zone SoilMHEPLDFALIRRLREVLDTRPATETELRTLTEQAEAWARTISGQLESSERRLRRLNQNPASSLAQIAGELRRVDHLRPQLDEVRSLLTDLEQRA
Ga0150984_11901009123300012469Avena Fatua RhizosphereMPEPLDFALIRRLREVLDDRPATESELRALKEQAEAWARTVGSQIDSSERRIRRLEQNPASSLAQIASELRRVDHLRPQLDEVRDLP
Ga0164299_1024362513300012958SoilMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLIANNASSLAQIASELRRVEKLRPQLHEV
Ga0164301_1007799323300012960SoilMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRRRRLIANNASSLAQIASELRRVEKL
Ga0164302_1043574513300012961SoilMPEPLDFALIRRLREVLDDRPATESELRTLKEQAEAWARTVGSQLESSERRIRRIDQNPASSLAQIASEL
Ga0134076_1037975723300012976Grasslands SoilMSQQLDFALINRLQEVLDRRPATEAELRSLKEQAEGWERAVNGQLQASERRIHRLNANPASSLAQIASELRRV
Ga0134087_1015555023300012977Grasslands SoilMPESLDFALIKRLREVLDSRPATESELRLLTEQAEAWALTVSGQLESSERRIRRLNQNPASSLAQIASELRRVEQLRPQLYEVRTLLADLE
Ga0164308_1159246613300012985SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLDEVGSLLADLEN
Ga0164306_1172513023300012988SoilMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVTGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVRSLLADL
Ga0157372_1318470923300013307Corn RhizosphereMAQPPLDFALIKRLREVLDDRPATESELRTLSEQADAWARTVSSQIESSERRIRRLNQNPSSSLAQIAS
Ga0120125_110554723300014056PermafrostMPEPLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVNGQLQSSERRLRRLNANPASSLAQIALELR
Ga0167629_115196113300015209Glacier Forefield SoilMPEPLDFALIKRLREVLDRRPATETELRSLKEQAEGWERAVNGQLQASERRLRRLNANSASSLAQIASELRRVERLRPQLEEVRSLLGDLENRTR
Ga0184608_1023076533300018028Groundwater SedimentMPEPLDFALIKRLREVLDDRPATETELRMLSEQAEAWARTIGSQLESSERRIRRLNQNPASSLAQIAGELKRVEKLR
Ga0184608_1036822713300018028Groundwater SedimentMPEPLDFALIKRLREVLDRRPATETELRTLKEEAEGWQRAVNGQLQASERRLRRLNANPASSLAQIASELRRVERLRPQLDEVGSLLGDLENRARE
Ga0187787_1030701913300018029Tropical PeatlandMAPPLDFALIKRLREVLADRPATEAELRTLSEQADAWARTVSGQLESSERRIHRLEQNHASSLAQIAAELRRVERLRPQLHEVQRLK
Ga0184620_1000291963300018051Groundwater SedimentMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASELRRVEK
Ga0184619_1003419613300018061Groundwater SedimentMPEPLDFVLIKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSASSLAQIASELRRVERLRPQLDEVRS
Ga0066655_1079226413300018431Grasslands SoilMSELDFALINRLHEVLDRRPATEAELRSLKEQAEGWERALGGQVESSERRLRRLNANPASSLAQIASELRRVERLRPQLTEVRS
Ga0066667_1097984813300018433Grasslands SoilLVALPESLDFALIKRLREVLDQRPATETELRTLKEQAEAWERTVNGQLQASERRLSRLNANYASSLSQIAGELRRVENLRPQLNEVRSLLAEL
Ga0066662_1186667833300018468Grasslands SoilMPQSLDFALIKRLREVLDDRPATETELRMLTEQAEAWARTISGQLESSERRIRRLNQNPASSLAQIASELRRVEQLRPQLH
Ga0193730_105233823300020002SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLEEV
Ga0193721_103660433300020018SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLESSERRLLRLNANPASSLAQIASELRRVEKLRPQLDEVR
Ga0182009_1050062413300021445SoilMAQPLDFALIKRLREVLDDRPATESELRTLSEQADGWARAISGQLESSERRIQRLEQNPASSLAQIASELRRVERLRPQLHE
Ga0207710_1078189023300025900Switchgrass RhizosphereMPELDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVNGQMEASERRLRRLNASPASSLAQIASELR
Ga0207688_1103946823300025901Corn, Switchgrass And Miscanthus RhizosphereMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSSSSLAQIASELRRVEKLRPQ
Ga0207663_1163648123300025916Corn, Switchgrass And Miscanthus RhizosphereMSEPLDFALIKRLREVLEDRPATESELRTLKEQSEAWARTVGGQIESSERRIRRLEQNPSSSLAQIAAELRRVEQLRPQLDEVRALLADLEERSRE
Ga0207686_1001703373300025934Miscanthus RhizosphereMPELDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVNGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVRSL
Ga0207640_1068711433300025981Corn RhizosphereMAQPPLDFALIKRLREVLDNRPATETELRSLSEQAEAWALTVGGQIESSERRIRRLNQNPGSSLAQIAAELRRVEQLRPQLNEVRTLIADL
Ga0207677_1080914423300026023Miscanthus RhizosphereMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSASSLAQIASELRRVEKLRPQLNEV
Ga0207683_1211747913300026121Miscanthus RhizosphereMPEPLDFALTKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANSASSLAQIASELRRVEKLRPQLNEVRSLL
Ga0207683_1213844513300026121Miscanthus RhizosphereMAPPLDFALIKRLREVLDDQPATEAELRSLSEQADAWARTVNGQIESSERRILRLNQNPGSSLAQIAAELRRVEQLRPQLHEVRRLQADL
Ga0209027_131681113300026300Grasslands SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVSGQIESSERRIRRLEQNPASSLAQIASELRRVEQLRPQLHEVRSLQADL
Ga0209238_126098823300026301Grasslands SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVSGQIESSERRIRRLEQNPASSLAQIASELRRVEQLRPQLHEVRSLQ
Ga0209808_114809723300026523SoilMPQPLDFALIERLREVLDNRPATETELRTLKEQAEAWALTISGQLESSERRLRRLNQNPASSLAQIASELRRVEQLRPQLQEVRSRRPTGRPR
Ga0209474_1050884523300026550SoilMPESLDFALIKRLREVLDSRPATESELRLLTEQAEAWALTVSGQLESSERRIRRLNQNPASSLAQIASELRR
Ga0209178_135975913300027725Agricultural SoilMAQPLDFALIKRLREVLDDRPATESELRMLSEQADAWARTVGGQIESSERRIRRLEQNPASSLA
Ga0307291_119725813300028707SoilMPEPLDFALIKRLREVLDRPATETELRTLKEQAEAWQLTVTGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDELRSLLADLE
Ga0307303_1005471113300028713SoilMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQ
Ga0307317_1010479313300028720SoilMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIASELRRVEKLRPQLDEVRSLLADLE
Ga0307315_1006611323300028721SoilMPEPLDFALIKRLREVLDDRPATETELRLLKEQAEAWARTIGSQLESSERRIRRLNQNPASSLAQIAGELKRVEKLRPQLDEVR
Ga0307280_1027095213300028768SoilMPDQLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLESSERRLLRLNANPASSLAQIASELRRVEK
Ga0307323_1015165713300028787SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLDE
Ga0307302_1021408913300028814SoilMPEPLDFALIKRLREVLDDRPATETELRLLKEQAEAWARTIGSQLESSERRIRRLNQNPASSLAQIAGELKRVEKLRPQ
Ga0307302_1066406423300028814SoilMPEPLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLDEVGSLLGDL
Ga0307296_1046551633300028819SoilMPEPLDFALIKRLREVLDDRPATETELRLLKEQAEAWARTIGSQLESSERRIRRLNQNPASSLAQIAGELKRVEKLRPQLDEVRGLIVEL
Ga0307310_1011766513300028824SoilMPEPLDFALIKRLREVLDHRPATETELRTLKEQAEAWELTVSGQMEASERRLRRLNASPASSLAQIAS
Ga0307310_1015570813300028824SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQ
Ga0307310_1071749923300028824SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLEEVGSLLGDLENR
Ga0307312_1085094423300028828SoilMPEPLDFALIKRLREVLDDRPATETELRMLSEQAEAWARTIGSQLESSERRIRRLNQNPASSLAQIAGELKRVEKLRPQLDEVRGLI
Ga0307289_1030778723300028875SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVEKLRPQLD
Ga0307277_1004889223300028881SoilMPEPLDFALIKRLREVLDRRPATETELRTLKEEAEGWQRAVSGQLQSSERRLRRLNANPSSSLAQIALELR
Ga0307277_1012261113300028881SoilMPEPLDFALIKRLREVLDRRPATETELRTLKEEAEGWQRAVNGQLQASERRLRRLNANPASSLAQIASELRRVERLRPQLDEVR
Ga0307277_1058484713300028881SoilLPEPLDFALIRRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLEASERRLRRLNANPASSLAQIASELRRVE
Ga0307308_1005461653300028884SoilMPEPLDFALIKRLREVLDDRPATETELRLLKEQAEAWARTIGSQLESSERRIRRLNQNPSSSLAQI
Ga0307308_1024464923300028884SoilMPDQLDFALIKRLREVLDRRPATETELRTLKEQAEGWQRAVSGQLESSERRLLRLNANPASSLAQIASELRRVEKLRPQ
Ga0307304_1032631713300028885SoilMPDSLDFALIKRLREVLGEQPATETELRSLTEQAAAWARTVSGQLESSERRIRRLNQNPASSLAQIAAELRRVEQL
Ga0307471_10421272623300032180Hardwood Forest SoilMAQPPLDFALLRRLREVLDDRPATESELRMLHEQAEAWARTVSGQLESSERRIRRLNQNPASSLAQIAAELRRVEQLRPQLIEVRQLLADLEARA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.