NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F081227

Metagenome / Metatranscriptome Family F081227

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081227
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 59 residues
Representative Sequence MSVLVLQELYDRKIDEASEMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMQ
Number of Associated Samples 85
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.82 %
% of genes near scaffold ends (potentially truncated) 32.46 %
% of genes from short scaffolds (< 2000 bps) 90.35 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (96.491 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(21.930 % of family members)
Environment Ontology (ENVO) Unclassified
(45.614 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(69.298 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 77.42%    β-sheet: 0.00%    Coil/Unstructured: 22.58%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF01844HNH 7.02
PF10544T5orf172 4.39
PF13620CarboxypepD_reg 2.63



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A96.49 %
All OrganismsrootAll Organisms3.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10068448Not Available1455Open in IMG/M
3300000117|DelMOWin2010_c10167403Not Available707Open in IMG/M
3300000148|SI47jul10_100mDRAFT_c1036855Not Available686Open in IMG/M
3300006025|Ga0075474_10181278Not Available651Open in IMG/M
3300006027|Ga0075462_10061798Not Available1183Open in IMG/M
3300006735|Ga0098038_1045647Not Available1595Open in IMG/M
3300006735|Ga0098038_1167806Not Available723Open in IMG/M
3300006752|Ga0098048_1038151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1542Open in IMG/M
3300006810|Ga0070754_10311909Not Available703Open in IMG/M
3300006810|Ga0070754_10337285Not Available669Open in IMG/M
3300006810|Ga0070754_10375595Not Available625Open in IMG/M
3300006868|Ga0075481_10083146Not Available1199Open in IMG/M
3300006870|Ga0075479_10080095Not Available1366Open in IMG/M
3300006870|Ga0075479_10242917Not Available715Open in IMG/M
3300006919|Ga0070746_10117483Not Available1316Open in IMG/M
3300007344|Ga0070745_1289685Not Available585Open in IMG/M
3300007345|Ga0070752_1272905Not Available651Open in IMG/M
3300007345|Ga0070752_1273821Not Available650Open in IMG/M
3300007346|Ga0070753_1270101Not Available613Open in IMG/M
3300007542|Ga0099846_1179659Not Available753Open in IMG/M
3300007623|Ga0102948_1155351Not Available697Open in IMG/M
3300007623|Ga0102948_1166725Not Available670Open in IMG/M
3300007725|Ga0102951_1103504Not Available807Open in IMG/M
3300007725|Ga0102951_1113721Not Available765Open in IMG/M
3300007725|Ga0102951_1195922Not Available571Open in IMG/M
3300007725|Ga0102951_1213439Not Available546Open in IMG/M
3300007725|Ga0102951_1245475Not Available510Open in IMG/M
3300007778|Ga0102954_1023167Not Available1735Open in IMG/M
3300007778|Ga0102954_1047833Not Available1187Open in IMG/M
3300009000|Ga0102960_1127166Not Available922Open in IMG/M
3300009000|Ga0102960_1162191Not Available803Open in IMG/M
3300009000|Ga0102960_1166821Not Available791Open in IMG/M
3300009000|Ga0102960_1211769Not Available690Open in IMG/M
3300009000|Ga0102960_1242586Not Available639Open in IMG/M
3300009001|Ga0102963_1413315Not Available529Open in IMG/M
3300009001|Ga0102963_1458022Not Available500Open in IMG/M
3300009027|Ga0102957_1418294Not Available503Open in IMG/M
3300009077|Ga0115552_1247686Not Available720Open in IMG/M
3300009438|Ga0115559_1074042Not Available1385Open in IMG/M
3300009449|Ga0115558_1219375Not Available777Open in IMG/M
3300009492|Ga0127412_10044875Not Available541Open in IMG/M
3300009508|Ga0115567_10956739Not Available507Open in IMG/M
3300009550|Ga0115013_10016134Not Available3949Open in IMG/M
3300009550|Ga0115013_10304338Not Available988Open in IMG/M
3300010149|Ga0098049_1227813Not Available568Open in IMG/M
3300010153|Ga0098059_1051343Not Available1657Open in IMG/M
3300010296|Ga0129348_1054073Not Available1444Open in IMG/M
3300010297|Ga0129345_1015196Not Available2990Open in IMG/M
3300010389|Ga0136549_10039516Not Available2542Open in IMG/M
3300012952|Ga0163180_11694548Not Available535Open in IMG/M
3300016766|Ga0182091_1325302All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2121Open in IMG/M
3300016791|Ga0182095_1233000Not Available737Open in IMG/M
3300016791|Ga0182095_1714343Not Available641Open in IMG/M
3300017708|Ga0181369_1085503Not Available667Open in IMG/M
3300017709|Ga0181387_1121575Not Available537Open in IMG/M
3300017735|Ga0181431_1020269Not Available1548Open in IMG/M
3300017764|Ga0181385_1126168Not Available781Open in IMG/M
3300017772|Ga0181430_1019979Not Available2206Open in IMG/M
3300017824|Ga0181552_10259340Not Available872Open in IMG/M
3300018036|Ga0181600_10260624Not Available890Open in IMG/M
3300018041|Ga0181601_10327972Not Available838Open in IMG/M
3300018416|Ga0181553_10585582Not Available590Open in IMG/M
3300019459|Ga0181562_10142732Not Available1310Open in IMG/M
3300019751|Ga0194029_1037771Not Available777Open in IMG/M
3300019751|Ga0194029_1082293Not Available554Open in IMG/M
3300019756|Ga0194023_1082468Not Available646Open in IMG/M
3300020053|Ga0181595_10097924Not Available1441Open in IMG/M
3300020462|Ga0211546_10317069Not Available780Open in IMG/M
3300021085|Ga0206677_10083603Not Available1548Open in IMG/M
3300021373|Ga0213865_10051497Not Available2276Open in IMG/M
3300021425|Ga0213866_10141492Not Available1282Open in IMG/M
3300021957|Ga0222717_10380259Not Available785Open in IMG/M
3300021957|Ga0222717_10561748Not Available604Open in IMG/M
3300021958|Ga0222718_10242816Not Available960Open in IMG/M
3300021958|Ga0222718_10256006Not Available927Open in IMG/M
3300021959|Ga0222716_10195435Not Available1284Open in IMG/M
3300021959|Ga0222716_10272757Not Available1033Open in IMG/M
3300021960|Ga0222715_10043674Not Available3136Open in IMG/M
3300021960|Ga0222715_10331057Not Available854Open in IMG/M
3300021960|Ga0222715_10534436Not Available616Open in IMG/M
3300021961|Ga0222714_10200033Not Available1155Open in IMG/M
3300021964|Ga0222719_10337970Not Available960Open in IMG/M
3300022065|Ga0212024_1037844Not Available832Open in IMG/M
3300022158|Ga0196897_1010153Not Available1171Open in IMG/M
3300022922|Ga0255779_1246863Not Available723Open in IMG/M
3300022927|Ga0255769_10233054Not Available788Open in IMG/M
3300022927|Ga0255769_10343998Not Available587Open in IMG/M
3300023273|Ga0255763_1294085Not Available581Open in IMG/M
3300025070|Ga0208667_1031515Not Available944Open in IMG/M
3300025086|Ga0208157_1031444Not Available1530Open in IMG/M
3300025099|Ga0208669_1062931Not Available824Open in IMG/M
3300025653|Ga0208428_1057891Not Available1161Open in IMG/M
3300025671|Ga0208898_1005413Not Available7157Open in IMG/M
3300025688|Ga0209140_1067512All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300025759|Ga0208899_1069065Not Available1422Open in IMG/M
3300025769|Ga0208767_1148672Not Available856Open in IMG/M
3300025803|Ga0208425_1026519Not Available1515Open in IMG/M
3300025840|Ga0208917_1199796Not Available666Open in IMG/M
3300025853|Ga0208645_1266628Not Available559Open in IMG/M
3300026125|Ga0209962_1084208Not Available510Open in IMG/M
3300026130|Ga0209961_1049412Not Available822Open in IMG/M
3300026138|Ga0209951_1045418Not Available948Open in IMG/M
3300026138|Ga0209951_1083708Not Available663Open in IMG/M
3300026138|Ga0209951_1091228Not Available630Open in IMG/M
3300026183|Ga0209932_1120091Not Available566Open in IMG/M
3300026187|Ga0209929_1045130Not Available1271Open in IMG/M
3300026187|Ga0209929_1116286Not Available680Open in IMG/M
3300026187|Ga0209929_1136201Not Available610Open in IMG/M
3300027859|Ga0209503_10013394All Organisms → cellular organisms → Bacteria → Proteobacteria3629Open in IMG/M
3300029448|Ga0183755_1021762Not Available2098Open in IMG/M
3300031773|Ga0315332_10083640Not Available2049Open in IMG/M
3300032136|Ga0316201_10374147Not Available1229Open in IMG/M
3300034374|Ga0348335_086803Not Available1033Open in IMG/M
3300034418|Ga0348337_052998Not Available1611Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous21.93%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water13.16%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh11.40%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.53%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water9.65%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water9.65%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.51%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.51%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.63%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.75%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.75%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.75%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.75%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.75%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.75%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.88%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow0.88%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.88%
Methane SeepEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Methane Seep0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000148Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100mEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009492Marine sediment microbial communities from Chincoteague Deepwater methane seep, US Atlantic Margin - Chincoteague Seep MUC-5 6-8 cmbsfEnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300016766Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016791Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020462Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022922Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300023273Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaGEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025688Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026125Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026130Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027859Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1006844823300000116MarineMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELESMK*
DelMOWin2010_1016740323300000117MarineMSVLVLQELFDRKLHEASEMSKEELAAELKGSVSNNNGMMSRDTMIEIVAMKLSNQELEAMQ*
SI47jul10_100mDRAFT_103685513300000148MarineMTIMVLQELFDSKVQDATEMSNEQLAKELKGSVSNTNGLMSRDTMIDIVAMKLANAELRDAS*
Ga0075474_1018127823300006025AqueousMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV*
Ga0075462_1006179813300006027AqueousMSVLVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELESMK*
Ga0098038_104564763300006735MarineMSNLAIQDLYQRKIDEASEMSNEQLAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0098038_116780623300006735MarineMSNLAIQDLYQRKIDEASEMSNEELAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0098048_103815113300006752MarineMSNLAIQDLYQRKIDEASEMSNEQLAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0070754_1031190913300006810AqueousMSVLVLQELFDRKLHEASEMSTEKLAAELKGSVSNNNGMMSRNTMIEIVAMKLSNKELETMK*
Ga0070754_1033728523300006810AqueousMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMQ*
Ga0070754_1037559513300006810AqueousMSVLVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEEMK*
Ga0075481_1008314623300006868AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV*
Ga0075479_1008009533300006870AqueousMSVLVLQELYDRKIDEASEMSTEQLAIELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0075479_1024291723300006870AqueousMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI*
Ga0070746_1011748323300006919AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMQ*
Ga0070745_128968513300007344AqueousMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVA
Ga0070752_127290513300007345AqueousGNWSLIMSVLVLQELFDRKLHEASEMSTEKLAAELKGSVSNNNGMMSRNTMIEIVAMKLSNKELETMK*
Ga0070752_127382113300007345AqueousEFMSVLVLQELYDRKIDEASEMSTEQLAIELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV*
Ga0070753_127010113300007346AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAM
Ga0099846_117965923300007542AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMI*
Ga0102948_115535133300007623WaterMSVLVLQELFDRKLHEASKMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEAMK*
Ga0102948_116672513300007623WaterRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIEIVAMKLSNQELEAMQ*
Ga0102951_110350433300007725WaterMSVLVLQELFDRKLHEASEMSNRELISELKGSITGIRAMPRDDMIEIVAMKLSNKELEAMQ*
Ga0102951_111372113300007725WaterMSVLVLQELYDRKIDEASEMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI*
Ga0102951_119592213300007725WaterVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEEMK*
Ga0102951_121343913300007725WaterMSVLVLQELFDRKLHEASKMSTKELASELKGSVSNNSGMMSRNTMIEIVAMKLSNKELEAMK*
Ga0102951_124547513300007725WaterDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0102954_102316743300007778WaterMSVLVLQELFDRKLHEASKMSTKELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEAMK*
Ga0102954_104783323300007778WaterMSVLVLQELFDRKLHEASEMSTEQLAAELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0102960_112716613300009000Pond WaterMSVLVLQELFDRKLHEASEMSTEELASALKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0102960_116219113300009000Pond WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVAMK
Ga0102960_116682123300009000Pond WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0102960_121176933300009000Pond WaterMSVLVLQELFDRKLHEASEMSTEELAAELKGSVSNNNGMMSRDTMIEIVAMKLSNQELEAMQ*
Ga0102960_124258623300009000Pond WaterMSVLVLQELFDRKLHEASEMSNRELISELKGSITGIRAMPRDNMIEIVAMKLSNKELEAMK*
Ga0102963_141331513300009001Pond WaterMSVLVLQELYDRKIDEASEMSTEQLAVELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI*
Ga0102963_145802223300009001Pond WaterLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI*
Ga0102957_141829423300009027Pond WaterSMSILVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0115552_124768613300009077Pelagic MarineMSVLVLQELFDRKLHEASEMSTEKLAAELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0115559_107404243300009438Pelagic MarineMSNLAIQDLYQRKIDEASEMSTEKLAAELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ*
Ga0115558_121937523300009449Pelagic MarineMSVLVLQELFDRKLHEASEMSTEKLAAELKGSVSNNNGMMSRNTMIEIV
Ga0127412_1004487523300009492Methane SeepVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNEELESMQ
Ga0115567_1095673923300009508Pelagic MarineMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0115013_1001613463300009550MarineMSSLVLQELFENKIQEASEMSNEELAKELKGSVSNSNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0115013_1030433823300009550MarineMSSLVLQELFENKIQEASEMSNEQLAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0098049_122781323300010149MarineMSNLAIQDLYQRKIDEASEMSNEELAKELKGGVSNTNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0098059_105134323300010153MarineMVLQELFDSKVQDATEMSNEQLAKELKGSVSNTNGLMSRDTMIDIVAMKLANAELRDAS*
Ga0129348_105407313300010296Freshwater To Marine Saline GradientMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTM
Ga0129345_101519643300010297Freshwater To Marine Saline GradientMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI*
Ga0136549_1003951623300010389Marine Methane Seep SedimentMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNQELEAMQ*
Ga0163180_1169454813300012952SeawaterSSLVLQELFENKIQEASEMSNEQLAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL*
Ga0182091_132530263300016766Salt MarshSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAM
Ga0182095_123300013300016791Salt MarshMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMK
Ga0182095_171434323300016791Salt MarshVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0181369_108550313300017708MarineMSNLAIQDLYQRKIDEASEMSNEELAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0181387_112157523300017709SeawaterMSSLVLQELYDSKIQEASEMSNEELAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0181431_102026963300017735SeawaterMSSLVLQELFENKIQEASEMSNEQLAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0181385_112616833300017764SeawaterMSSLVLQELYDSKIQEASEMSNEELAKELKGSVSNRNGMMSRDTMIDIVAM
Ga0181430_101997913300017772SeawaterMSSLVLQELFENKIQEASEMSNEQLAKELKGSVSNTNGMMSRDTMIDIV
Ga0181552_1025934013300017824Salt MarshMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0181600_1026062433300018036Salt MarshMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMI
Ga0181601_1032797223300018041Salt MarshMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMI
Ga0181553_1058558213300018416Salt MarshMSVLVLQELYDRKIDEASEMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMQ
Ga0181562_1014273223300019459Salt MarshMSVLVLQELYDRKIDEASEMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0194029_103777113300019751FreshwaterMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEA
Ga0194029_108229313300019751FreshwaterMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEAMQ
Ga0194023_108246813300019756FreshwaterMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV
Ga0181595_1009792423300020053Salt MarshMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0211546_1031706923300020462MarineMSNLAIQDLYQRKIDEASEMSNEELAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0206677_1008360323300021085SeawaterMSSLVLQELFENKIQEASEMSNEQLAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0213865_1005149743300021373SeawaterMSVLVLQELYDRKIDEASEMSTQQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMQ
Ga0213866_1014149213300021425SeawaterMSILVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMQ
Ga0222717_1038025923300021957Estuarine WaterMSVLVLQELFDRKLHEASKMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEAMK
Ga0222717_1056174813300021957Estuarine WaterMSVLVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEEMK
Ga0222718_1024281623300021958Estuarine WaterMSILVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ
Ga0222718_1025600633300021958Estuarine WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELESMK
Ga0222716_1019543533300021959Estuarine WaterMSVLVLQELFDRKLHEASKMSTKELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEAMK
Ga0222716_1027275733300021959Estuarine WaterMSVLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMQ
Ga0222715_1004367453300021960Estuarine WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNQELEAMQ
Ga0222715_1033105743300021960Estuarine WaterMSVLVLQELFDRKLHEASKMSTKELASELKGSVSNNSGMMSRNTMI
Ga0222715_1053443613300021960Estuarine WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTM
Ga0222714_1020003333300021961Estuarine WaterMSILVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVAMK
Ga0222719_1033797013300021964Estuarine WaterMSVLVLQELFDRKLHEASEMSTEELAAELKGSVSNNNGMMSRDTMIEIVAMKLSNQELEAMQ
Ga0212024_103784413300022065AqueousMSVLVLQELYDRKIDEASEMSTEQLAIELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0196897_101015313300022158AqueousMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEEMK
Ga0255779_124686323300022922Salt MarshMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMIXEM
Ga0255769_1023305413300022927Salt MarshIGEFMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0255769_1034399833300022927Salt MarshVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMI
Ga0255763_129408533300023273Salt MarshYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMI
Ga0208667_103151523300025070MarineMSNLAIQDLYQRKIDEASEMSNEQLAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0208157_103144453300025086MarineMSNLAIQDLYQRKIDEASEMSNEQLAKELKGSVSNTNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0208669_106293123300025099MarineMSNLVIQDLYQRKIDEASEMSNEQLAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0208428_105789123300025653AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMID
Ga0208898_100541333300025671AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEEMK
Ga0209140_106751233300025688MarineMTIMVLQELFDSKVQDATEMSNEQLAKELKGSVSNTNGLMSRDTMIDIVAMKLANAELRDAS
Ga0208899_106906523300025759AqueousMSVLVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRNTMIEIVAMKLSNQELEEMK
Ga0208767_114867233300025769AqueousLVLQELYDRKIDEACAMSTEELAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV
Ga0208425_102651923300025803AqueousMSVLVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELESMK
Ga0208917_119979623300025840AqueousMSVLVLQELFDRKLHEASEMSTEKLAAELKGSVSNNNGMMSRNTMIEIVAMKLSNKELETMK
Ga0208645_126662813300025853AqueousMSVLVLQELYDRKIDEASEMSTEKLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV
Ga0209962_108420813300026125WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ
Ga0209961_104941213300026130WaterMSILVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKELEAMK
Ga0209951_104541813300026138Pond WaterMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLAN
Ga0209951_108370813300026138Pond WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNNGMMSRDTMIEIVA
Ga0209951_109122813300026138Pond WaterMSVLVLQELFDRKLHEASKMSTEELASELKGSVSNNNGMMSRNTMIEIVAMKLSNKEL
Ga0209932_112009113300026183Pond WaterMSVLVLQELFDRKLHEASEMSTEELASELKGSVSNNSGM
Ga0209929_104513043300026187Pond WaterMSVLVLQELYDRKIDEASEMSTEQLAVELKGSVSNNNGMMSRDTMIDIVAMKLANQELEAMI
Ga0209929_111628613300026187Pond WaterMSVLVLQELFDRKLHEASEMSTEELASALKGSVSNNNGMMSRDTMIEIVAMKLSNEELEAMQ
Ga0209929_113620113300026187Pond WaterMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQ
Ga0209503_1001339433300027859MarineMSSLVLQELFENKIQEASEMSNEELAKELKGSVSNSNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0183755_102176263300029448MarineMSSLVLQELFENKIQEASEMSNEELAKELKGSVSNRNGMMSRDTMIDIVAMKLSNAELRDEL
Ga0315332_1008364053300031773SeawaterMSSLVLQELFENKVQEASEMSNEQLAKELKGSVSNRNGMMSRDTMIDIVAMKLSNA
Ga0316201_1037414733300032136Worm BurrowMSVLVLQELFDRKLHEASEMSTEKLASELKGSVSNNNGMMSRN
Ga0348335_086803_896_10333300034374AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMI
Ga0348337_052998_1295_14833300034418AqueousMSVLVLQELYDRKIDEASEMSTEQLAAELKGSVSNNNGMMSRDTMIDIVAMKLANQELESMV


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