Metagenome / Metatranscriptome Family F081118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081118
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	71 residues
Representative Sequence	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSAAQNYQLLSVENPQLHTDRLKRARETEY
Number of Associated Samples	88
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	77.19 %
% of genes from short scaffolds (< 2000 bps)	70.18 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.561 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (42.983 % of family members)
Environment Ontology (ENVO)	Unclassified (40.351 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.877 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.64% β-sheet: 0.00% Coil/Unstructured: 39.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF10741	T2SSM_b	42.11
PF04350	PilO	38.60
PF05137	PilN	2.63
PF05157	T2SSE_N	0.88
PF00437	T2SSE	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3167	Type IV pilus assembly protein PilO	Cell motility [N]	77.19
COG3166	Type IV pilus assembly protein PilN	Cell motility [N]	5.26

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.56 %
Unclassified	root	N/A	25.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.56 %
Unclassified	root	N/A	25.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.56 %
Unclassified	root	N/A	25.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.56 %
Unclassified	root	N/A	25.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.42 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.42 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	1.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10483317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300002915\|JGI25387J43893_1060120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300002917\|JGI25616J43925_10291938	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300004139\|Ga0058897_11118243	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300005167\|Ga0066672_10080040	All Organisms → cellular organisms → Bacteria → Acidobacteria	1952	Open in IMG/M
3300005176\|Ga0066679_10575671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300005176\|Ga0066679_10812046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005178\|Ga0066688_10070047	All Organisms → cellular organisms → Bacteria → Acidobacteria	2080	Open in IMG/M
3300005187\|Ga0066675_10846102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300005450\|Ga0066682_10195929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1294	Open in IMG/M
3300005553\|Ga0066695_10135749	All Organisms → cellular organisms → Bacteria → Acidobacteria	1526	Open in IMG/M
3300005555\|Ga0066692_10065576	All Organisms → cellular organisms → Bacteria → Acidobacteria	2066	Open in IMG/M
3300005569\|Ga0066705_10090772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1800	Open in IMG/M
3300005575\|Ga0066702_10742859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005576\|Ga0066708_10492731	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300005576\|Ga0066708_10965110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005586\|Ga0066691_10083034	All Organisms → cellular organisms → Bacteria → Acidobacteria	1775	Open in IMG/M
3300006031\|Ga0066651_10094498	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300006796\|Ga0066665_10665499	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300006797\|Ga0066659_10748631	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300007788\|Ga0099795_10435302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300009088\|Ga0099830_11113085	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300011269\|Ga0137392_10153893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1858	Open in IMG/M
3300011269\|Ga0137392_10451231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300011270\|Ga0137391_10287059	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300011271\|Ga0137393_10224800	All Organisms → cellular organisms → Bacteria → Acidobacteria	1589	Open in IMG/M
3300011271\|Ga0137393_11395214	Not Available	590	Open in IMG/M
3300011271\|Ga0137393_11501881	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300012096\|Ga0137389_11186532	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300012189\|Ga0137388_10496385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	1133	Open in IMG/M
3300012202\|Ga0137363_10625234	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300012203\|Ga0137399_10374999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1184	Open in IMG/M
3300012203\|Ga0137399_10472247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300012203\|Ga0137399_11248512	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300012205\|Ga0137362_11682546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012206\|Ga0137380_10399708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300012208\|Ga0137376_10029524	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4337	Open in IMG/M
3300012349\|Ga0137387_11104978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012361\|Ga0137360_10536795	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300012361\|Ga0137360_11775191	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300012362\|Ga0137361_10841470	Not Available	834	Open in IMG/M
3300012363\|Ga0137390_10185563	All Organisms → cellular organisms → Bacteria → Acidobacteria	2066	Open in IMG/M
3300012363\|Ga0137390_10872378	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300012685\|Ga0137397_10048756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3037	Open in IMG/M
3300012918\|Ga0137396_10312213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300012918\|Ga0137396_11144006	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012925\|Ga0137419_10502777	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M
3300012925\|Ga0137419_11227428	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300012927\|Ga0137416_11052055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300012927\|Ga0137416_11148442	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300012927\|Ga0137416_11522418	Not Available	608	Open in IMG/M
3300012929\|Ga0137404_10595773	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300012975\|Ga0134110_10026873	All Organisms → cellular organisms → Bacteria → Acidobacteria	2240	Open in IMG/M
3300014157\|Ga0134078_10107399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300015054\|Ga0137420_1031903	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300015054\|Ga0137420_1192310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300015193\|Ga0167668_1096187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300015264\|Ga0137403_10088127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3126	Open in IMG/M
3300018468\|Ga0066662_10109512	All Organisms → cellular organisms → Bacteria → Acidobacteria	1982	Open in IMG/M
3300018482\|Ga0066669_10708065	Not Available	887	Open in IMG/M
3300020022\|Ga0193733_1047953	All Organisms → cellular organisms → Bacteria → Acidobacteria	1206	Open in IMG/M
3300021086\|Ga0179596_10014165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2720	Open in IMG/M
3300021170\|Ga0210400_10771595	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300021432\|Ga0210384_10277130	All Organisms → cellular organisms → Bacteria → Acidobacteria	1510	Open in IMG/M
3300021559\|Ga0210409_10379613	All Organisms → cellular organisms → Bacteria → Acidobacteria	1267	Open in IMG/M
3300021559\|Ga0210409_10480108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	1105	Open in IMG/M
3300026277\|Ga0209350_1026500	All Organisms → cellular organisms → Bacteria → Acidobacteria	1754	Open in IMG/M
3300026277\|Ga0209350_1139079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300026329\|Ga0209375_1272051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300026332\|Ga0209803_1060971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1631	Open in IMG/M
3300026333\|Ga0209158_1254048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300026334\|Ga0209377_1208490	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300026342\|Ga0209057_1167682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300026497\|Ga0257164_1098943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300026530\|Ga0209807_1302409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300026551\|Ga0209648_10480551	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300026552\|Ga0209577_10779890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300027633\|Ga0208988_1071782	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300027660\|Ga0209736_1204290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300027669\|Ga0208981_1119140	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300027671\|Ga0209588_1124253	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300027671\|Ga0209588_1133857	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300027846\|Ga0209180_10266098	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300027862\|Ga0209701_10308951	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300027875\|Ga0209283_10433128	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300027903\|Ga0209488_10196577	All Organisms → cellular organisms → Bacteria → Acidobacteria	1520	Open in IMG/M
3300031754\|Ga0307475_10532706	All Organisms → cellular organisms → Bacteria → Acidobacteria	942	Open in IMG/M
3300031962\|Ga0307479_10160306	All Organisms → cellular organisms → Bacteria → Acidobacteria	2209	Open in IMG/M
3300031962\|Ga0307479_10939649	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.12%
Aquatic	Environmental → Aquatic	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.12%
Freshwater	Environmental → Aquatic → Freshwater	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.74%
Loam	Environmental → Terrestrial → Soil → Loam	4.39%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	36.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.39%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	42.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.63%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_104833172	3300002908	Grasslands Soil	MKQKKQLVVLAVLLLTAGVIWFFYFDRGRPIVAADAGSASQNPPLLSVENPQLHTDRLKRARETEYKSTGRNIF
JGI25390J43892_101250261	3300002911	Grasslands Soil	MNQKKQLVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNIFSRQLPPPPPKQVRQDLVAPI
JGI25387J43893_10601202	3300002915	Grasslands Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPIVTVVAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIFSATPPPPP
JGI25616J43925_102919382	3300002917	Grasslands Soil	MKQKKQLAVLVVLLLVAGVIWFLYFDHNKPMVTAQAGSPIQNYQLLSVDNPQLHNDGVDKARKTEYKSGGRNIFSRELPP
Ga0058897_111182433	3300004139	Forest Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSGAQNPPLLSVENPRLHTDRLE
Ga0066672_100800404	3300005167	Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPIVTVAAGTTAPQLLSVENPQLHTDRLKRARETEYKSTVRNIFSATPPPPP
Ga0066679_105756711	3300005176	Soil	MKQKKQLVVLAVLLMTAGAIWFFYFDRGRPIVTADGGSASQNPPLLSVENPQLHTDRLKRARETEYKST
Ga0066679_108120461	3300005176	Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHTDKLERARA
Ga0066690_106415301	3300005177	Soil	MKQKKQLVVLVFLLLIAGFIWFVYFNHDKPIVTADAIPTPQSYQPIGVDNPQLHNDAVERARKTEYKGSGRNPFSRELPPSTQRKESKKDPPVVPSVP
Ga0066688_100257641	3300005178	Soil	MKQKKQLVVLVFLLLIAGFIWFVYFNHDKPIVTADAIPTPQSYQPIGVDNPQLHNDAVERARKTEYKGSGRNPFSRELPPSTQ
Ga0066688_100700474	3300005178	Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPIVTVAAGTTAPQLLSVENPQLHTDRL
Ga0066675_105072572	3300005187	Soil	MKQKKQLVVLVFLLLIAGFIWFVYFNHDKPIVTADAIPTPQNYQPIGVDNPQLHNDAVGRARKTEYKGSGRNPF
Ga0066675_108461022	3300005187	Soil	MTQKKQLAVLVVLLLIGGVIWFLYFDRDKPIVTADAGSAAQAYQLLSVENPQLHTDREKRARETEYKSTGRNIFSATPPPP
Ga0066682_101959293	3300005450	Soil	MNQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRL
Ga0066695_101357491	3300005553	Soil	MNQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIFSA
Ga0066692_100655764	3300005555	Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDRTVVTADAKSVVHNYKLLSVDNPQLHIDGVERARKTEYKSRGRNIFSR
Ga0066707_100029031	3300005556	Soil	MNQKKQLVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNIFSRQLPPPP
Ga0066699_109772651	3300005561	Soil	MKQKKQLVVLVFLLLIAGFIWFVYFNHDKPIVTADAIPTPQSYQPIGVDNPQLHNDAVERARKTEYKGSGRNPFSRELPPPPRP
Ga0066705_100907724	3300005569	Soil	MNQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRLKRARETEYKST
Ga0066705_103906883	3300005569	Soil	MNQKKQLVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNIFSRQLP
Ga0066702_107428591	3300005575	Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPIVTVAAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIF
Ga0066708_104927311	3300005576	Soil	MNQKKQLVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNIFSRQLPPP
Ga0066708_109651101	3300005576	Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHTDKLERARATEYKSTGRNIFSLT
Ga0066691_100830344	3300005586	Soil	MNQKRQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRL
Ga0066651_100944981	3300006031	Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVAAGTTAPQLLSVENPQLH
Ga0066665_106654991	3300006796	Soil	MKQKKQLVVLAVLLMTAGAIWFFYFDRGRPIVTADAGSASQNPPLLSVENPQLHTDRLKRARETEYKSTGRN
Ga0066665_109470551	3300006796	Soil	MKQKKQLVVLVVLLLIAGFIWFVYFDHDKPIVTADAIPTPQNYTPIGVDNPQLHNDAVEKARKTEYKSTGRNI
Ga0066659_107486311	3300006797	Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHTDKLERARATE
Ga0099793_100828243	3300007258	Vadose Zone Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDRTVVTADAKSAVHNYKLLSVDNPQLHTEGVERARKTEYKSRGRNIFSRELPPPP
Ga0099793_104220321	3300007258	Vadose Zone Soil	MKQSKQLVVLAVLLLIAGFIWFLYFDHDKPVVTADAIPTPQNYHPIGVDNPQLHNDVVEKARKTDYKSAGRNIFSRQLPPPPLPKH
Ga0099795_104353022	3300007788	Vadose Zone Soil	MKQKKELIVLVLLLLTAGSIWFFYFDHDRPVVTADAGTSAQNPKLLQVENPS
Ga0099830_111130852	3300009088	Vadose Zone Soil	MKQKKQFVVLAVLLLIAGGIWFLYFDRDKPIVTADAGSATKNYQLLSVENPSLHKEGVERARKTEYKSSG
Ga0127503_106772022	3300010154	Soil	MKQQKQLVVLIVLLLIAGGIWYFYFVHDKPVVTADANSAAQNYQLLSVDNPQLHTD
Ga0134082_104206312	3300010303	Grasslands Soil	MKQKKQLVVLVFLLLIAGFIWFVYFNHDKPIVTADAIPTPQSYQPIGVDNPQLHNDAVARARKTEYKGSGRNPFSRELP
Ga0137392_101538934	3300011269	Vadose Zone Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSAAQNYQLLSVENPQLHTDRLKRAR
Ga0137392_104512313	3300011269	Vadose Zone Soil	MKQKKQFVVLAVLLLIAGFIWFLYLDHGRPVLTADAGSLPQNPKLLSVENPQLHI
Ga0137392_108188852	3300011269	Vadose Zone Soil	MNQKKQLAVLAVLLLIAGFIWFFYFDHNKPVVTPDASTAAQNYQPIGVDNPQLHIDQVEKARKTEYKSRGRNIFSREVPPPPLT
Ga0137391_101155371	3300011270	Vadose Zone Soil	MNQKKQLAVLVVLLLIAGFIWFLYFDHNRPVVTADSSSVVHNYQPIGVDNPKLHNDGVERARKTEYKSSGRNIFSRELVLPPKPKT
Ga0137391_102870591	3300011270	Vadose Zone Soil	MKQKKQFVVLAVLLLIAGFIWFLYLDHGRPVLTADAGSLPQNPKLLSVENPQLHIPAVDRARKTEYKSGGRNIFSREL
Ga0137393_102248001	3300011271	Vadose Zone Soil	MKQKKQLVVLVVLLLIAGGIWFLYLDHARPVVTADAGSAIQNPKLLSVENPQLHNAGVDRARRTEYKSGGRNI
Ga0137393_113952141	3300011271	Vadose Zone Soil	MNQKKQFAVLAVLLLILGAGAYLYFDRDNPVVTPDAGAAAQNPQLLSVDNPQLHIYGVEKARKTEYKSSGRNIFI
Ga0137393_115018812	3300011271	Vadose Zone Soil	MKQKKQLAVLVTLLLTAGVIWFLYFDFDKPIVTTVVGAAQTPQLLSVDNPQLHTYG
Ga0137389_111865322	3300012096	Vadose Zone Soil	MKQKKQFVVLAVLLLIAGGIWFLYFDRDKPIVTADAGSATKNYQLLSVENPSLHKEGVERARKTEYKSSGR
Ga0137388_104963851	3300012189	Vadose Zone Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSGAQNPPLLSVENPRLHTDRLERARATEYKSTGRNIFSLTPPAP
Ga0137363_106252344	3300012202	Vadose Zone Soil	MKQKKQLVVLVVLLLIAGGTWFFYLDHARPVVTADAGSAIQNPKLLSVENPQLHNAGVDRARRTEYKSGGRN
Ga0137399_101607014	3300012203	Vadose Zone Soil	MSQKKQLVVLVVLLLVAGFIWFLYFDHNRPVVTADSTSVVQNYRPLGVDNPQLHWGPVERARKTEYKSSGRNIFSRELPPPPLTPEQKKKLE
Ga0137399_103749993	3300012203	Vadose Zone Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDKSVVTADAKSAIHNYKLLSVDNPQLHTEGVERARKTEYKSRGR
Ga0137399_104722473	3300012203	Vadose Zone Soil	MKQKKQLALLAVLLLTAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDRL
Ga0137399_112485122	3300012203	Vadose Zone Soil	MKQKKQLAVLAALLLTAGVIWFLYFDFDKPIVTVDAGAAAQNPQLLSVENPQLHTYGVEKARNTEYKSGR
Ga0137362_116825462	3300012205	Vadose Zone Soil	MKQKKQLAVLAALLLTAGVIWFLYFDFDKPIVTVDAGAAAQNPQLLSVENPQLHTYGVAKARNTEYKSGRRNIF
Ga0137380_103997083	3300012206	Vadose Zone Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHTDKLERARATEYKSTGRNIF
Ga0137376_100295246	3300012208	Vadose Zone Soil	MKQKKQLAVLSVLLLIAGLIWFLYLDHDKPIVTVAAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIFSAT
Ga0137387_111049781	3300012349	Vadose Zone Soil	MKQKKQLVVLAVLLMTAGAIWFFYFDRGRPIVTADAGSASQNPPLLSVENPQLHTDRLKRARETEYKSTGRNIFSL
Ga0137360_105367953	3300012361	Vadose Zone Soil	MKQKKQLAVLVVLLLTAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDRLKRARETEYKSTGRNIFSLTPP
Ga0137360_117751911	3300012361	Vadose Zone Soil	MKQKKQLAVLAALLLTAGVIWLLYFDFDKPIVTVDAGAAAQNPQLLSVENPQLHTYGVERARNTEYKSGRRNI
Ga0137361_108414701	3300012362	Vadose Zone Soil	MKQKKQLAVLAVLLLIAGGIWFLYFTRDNPIVTADAGSVTKNYKLLSVENPRLHKEGVE
Ga0137390_101855631	3300012363	Vadose Zone Soil	MKQKKQFVVLAVLLLIAGFIWFLYLDHGRPVLTADAGSLPQNPKLLSVENPQLHIPAV
Ga0137390_108723783	3300012363	Vadose Zone Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSAAQNYQLLSVENPQLHTDRLKRARETEY
Ga0137397_100487565	3300012685	Vadose Zone Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDKSVVTADAKSAVHNYKLLSVDNPQLHTEGVERARKTEYKSRGR
Ga0137396_103122132	3300012918	Vadose Zone Soil	MKQKQQLAVLVVLLLIAGVIWFLYFDRDKPIVTADAGSGAQNYQLLSVENPQPHTDREKRARETE*
Ga0137396_111440062	3300012918	Vadose Zone Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDRTVVTADAKSAVHNYKLLSVDNPQLHTEGVERARK
Ga0137359_110090351	3300012923	Vadose Zone Soil	MKQKKQLVVLAVLLMTAGVIWFFYFDRGRPIVTADAGSGSQNPPLLSV
Ga0137419_105027771	3300012925	Vadose Zone Soil	MKQKKQLAVLVVLLLTAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDR
Ga0137419_112274282	3300012925	Vadose Zone Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDRTVVTADAKSAVHNYKLLSVDNPQLHTEGVERARKTEYKSRGR
Ga0137416_110520551	3300012927	Vadose Zone Soil	MKQKKQLAVLSVLLLIAGAIWFLYLDHDKPMVTAAAGATAPQLLSVENPQLHTDRLKRARETEYKSTGRNIF
Ga0137416_111484421	3300012927	Vadose Zone Soil	MKQKKQLGVLAVLLLIAGGIWFIYFDHDKPTVAADAGSAIHNFKLLSVENPQLHNYGVDRARKTEYKSAG
Ga0137416_115224182	3300012927	Vadose Zone Soil	MKQKKQLVVLAVLLMTAGVIWFFYFDRGRPIVTAAAGSASQNPPLLSVDNPQLHT
Ga0137404_105957733	3300012929	Vadose Zone Soil	MKQKKQLAVLVVLLLTAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDRLKRARETEYKSTGRNIFSLTPPPP
Ga0134110_100268731	3300012975	Grasslands Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHTDKL
Ga0134078_101073993	3300014157	Grasslands Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPIVTVVAGTTAPQLLSVENPQLHTDRLKRARETE
Ga0137420_10319032	3300015054	Vadose Zone Soil	MKQKKQLAVLAALLLTAGVIWFLYFDFDKPIVTVDAGATAQNPQLLSVENPQLHTYGVAKARNTEYKSGRR
Ga0137420_11923101	3300015054	Vadose Zone Soil	MNQKKQLVVLVVLLLTAGFIWFLYFNNSKPVVTADARPATQNYQPIGVDNPQLHKDGVEKARKTEYKTSGRNIFSRELPENFRLHQN
Ga0167668_10961872	3300015193	Glacier Forefield Soil	MKQKKQIAVLAVLLLTAGIGWFWYFERDKATVAAGAVYVAQNYQLLSVENPQLHKDEVERARKTEYKSTGRNIFSEIAPQPPETPHETKPKKI
Ga0137403_100881275	3300015264	Vadose Zone Soil	MKQKKQLAVLVVLLLAAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDRLKRARETEYKSTGRNIFSLTPPPP
Ga0066662_101095121	3300018468	Grasslands Soil	MNQKKQFVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNI
Ga0066669_107080653	3300018482	Grasslands Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVAAGTTAPQLLSVENPQLHTDRL
Ga0193733_10479534	3300020022	Soil	MNQKKQLAVLSVLLLIAGAIWFLYLDHDKPMVTVNAGTTAPQLLSVENP
Ga0210401_113102041	3300020583	Soil	MKQKRQVMVLVALLLIAGVIWFFYFGHDKPALTADAANSGQNPQLLSVDNPSLHKDGVERTRKTEYKSGGRNIFSREIPPPPLSKQEVQERK
Ga0179596_100141655	3300021086	Vadose Zone Soil	MKQKKQLVVLAVLLMTAGVIWFFYFDRGRPIVTADAGSGSQNPPLLSVENPQL
Ga0210400_107715951	3300021170	Soil	MKQKKQLVVLAALLLIAGFIWFLYLDHGRSVLTADAGSLPQNPKLLSVENPQLHFSAVDRARKTEYKSSGRN
Ga0210384_102771304	3300021432	Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSGAQNPPLLSVENPRLHTDRLERARETEYKSTGRNIFSLTPP
Ga0210410_102140461	3300021479	Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSGAQNPPLLSV
Ga0210409_103796131	3300021559	Soil	MKQKKQLAVLVVLLLTAGGIWFLYFDHDKPVTADAGAAAQNYHFLSVDNPSLHKAGV
Ga0210409_104801083	3300021559	Soil	MKQKKQLVVLVVLLLIAGGIWFLYLDHARPVVTADAGSAIQNPKLLSVENPQLHTAGVDRARRTEYKSGGRNIFSRELP
Ga0209350_10265001	3300026277	Grasslands Soil	MKQMKQLVVLAVLLLTAGVIWFFYFDRGRPIVAADAGSASQNPPLLSVENPQLHTDRLKRARETEYKS
Ga0209350_11390792	3300026277	Grasslands Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHTDKLERA
Ga0209238_10034368	3300026301	Grasslands Soil	MKQKKQLVVLAFFLLIAGFIWFVYFNHDKPIVTADAIPPPQSYPPIGVDNPQLHNDAVERARKTEYKGSGRNPFSRELPP
Ga0209801_100426110	3300026326	Soil	MNQKKQLVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNIFSRQLPPPPPKQVRQDLVAPIVQQAPVTATPTVSPLPVKF
Ga0209375_12720511	3300026329	Soil	MNQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIFSATPPPPP
Ga0209803_10609714	3300026332	Soil	MKQKKQLAVLSVLLLIAGVIWFLYLDHDKPIVTVAAGTTAPQLLSVENPQLHTDRLKRARGTEYKSTGRNIFSATP
Ga0209158_12540481	3300026333	Soil	MKQKKQLVVLAVLLMTAGAIWFFYFDRGRPIVTADGGSASQNPPLLSVENPQLHTDRLKRARETE
Ga0209377_12084901	3300026334	Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHDRTVVTADAKSVVHNYKLLSVDNPQLHIDGVERARKTEYKSRG
Ga0209057_11676822	3300026342	Soil	MNQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIFSATPP
Ga0257164_10989431	3300026497	Soil	MKQKKQLAVLVALLLIAGFIWFLYFGRDNPIATVDAGAAQNPQLLSVENPQLHTYGVEKARNTEYK
Ga0209807_13024092	3300026530	Soil	MNQKKQLAVLSVLLLIAGVIWFLYLDHDKPMVTVVAGTTAPQLLSVENPQLHTDRLKRARETEYKSTGRNIFSATPPPP
Ga0209160_11034101	3300026532	Soil	MNQKKQLVVLVVLLLIAGFIWFLYLDHDKPVVTADAIPTPQNYHPIAVDNPQLHNDAVERARKTEYKSAGRNIFSRQLPPPPPKQVRQDLVAPIVQQAPVTATPT
Ga0209648_104805511	3300026551	Grasslands Soil	MKQKKQLVVLVVLLLIAGGIWFLYLDHARPVVTADAGSAIQNPKLLSVENPQLHNAGVDRARRTEYKSG
Ga0209577_107798902	3300026552	Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAVQNPPLLSVENPRLHT
Ga0209214_10476761	3300027071	Forest Soil	MKQKKQVAALVVLLVIAGAIWFFYFDHNQSKVTADSPSVVHNYRPLGVDNPQLHTDSVERARKTEY
Ga0208988_10717821	3300027633	Forest Soil	MKQKKQLAVLVVLLLTAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDRLKRARETE
Ga0209388_11942192	3300027655	Vadose Zone Soil	MNQKKQLVALVVLLLIAGFIWFLYFNNSKPVVTADARPATQNYQPIGVDNPQLHKDGVEKARKTEYKSSGRNIFSRELPPPSKPKIQVPDP
Ga0209736_12042901	3300027660	Forest Soil	MKQKKQLAVLAALLLIAGFIWFLYLDRDKPIVTADAGAAAQNSQLLSVENPQLHT
Ga0208981_11191402	3300027669	Forest Soil	MKQKKQLAVLVVLLLTAGVIWFLYFDRDRPIVTADAGSATQNPPLLSVENPQLHTDRLKRARETEYKSTGRNIFSLTPPP
Ga0209588_11242531	3300027671	Vadose Zone Soil	VKQKKQLAMLVVLLLITGVIWFFYFNHDKPMVTAEAGSPVQNYQLLSVDNPQLHTDGVDKARKTEY
Ga0209588_11338572	3300027671	Vadose Zone Soil	MKQKKQLAVLAVLLLIAGGIWFLYFDRDKPIVTADAGSAAKNYQLLSVENPSLHKDGVEK
Ga0209180_102660981	3300027846	Vadose Zone Soil	MKQKKQLAVLVVLLLVAGVIWFFYFNHDKPMVTAEAGSPVQNYQLLSVDNPQLHNDGVDKARKTEYKSRGRNIFSRELPPPP
Ga0209701_103089513	3300027862	Vadose Zone Soil	MKQKKQLAVLVVLLLIAGGIWFLYFDRDKPIVTADAGSAAKNYQLLSVENPSLHKDGVDKARRTEYKSGGRNIFSRE
Ga0209283_104331281	3300027875	Vadose Zone Soil	MKQKKQLAVLVVLLLIAGGIWFLYFDRDKPIVTADAGSAAKNYQLLSVENPSLHKDGVDKARRTEYKSGGRNIFSRELPPP
Ga0209488_101965771	3300027903	Vadose Zone Soil	MKQKKQLVVLAVLLMTAGVIWFFYFDRGRPIVTADAGSGSQNPPLLSVENPQLHTDRLKRARETEYK
Ga0170824_1032376263	3300031231	Forest Soil	MNQKKQLAVLVILLLIAGSIWFLYFAHDRPVVTASVVHNYKPLGVDNPSLRWDPVERTRKTEYKSSGRNIFSRELPPPPVPK
Ga0307469_110717281	3300031720	Hardwood Forest Soil	MKQKKQFAVLVVLLLIAGAIWFFYFDHNQSKVTADSPSVVHNYRPLGVDNPQLHTDSV
Ga0307475_105327061	3300031754	Hardwood Forest Soil	MKQKKQLAVLAVLLLTAGVIWFLYFDRDRPVVTADAGSGAQNPPLLSVENPRLHTDRLERARATEY
Ga0307479_101603061	3300031962	Hardwood Forest Soil	MKQKKQLVVLAVLLLTAGLIWSLYFGHDRSVATADAPFAVQNYQPLGVENTQLHTYV
Ga0307479_109396492	3300031962	Hardwood Forest Soil	MKQKKQVAALVVLLVIAGAIWFFYFDHNQSKVTADSPSVVHNYRPLGVDNPQLHTDSVERARKTEYKSKGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences