Metagenome Family F081068

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081068
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	47 residues
Representative Sequence	HDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Number of Associated Samples	79
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.63 %
% of genes near scaffold ends (potentially truncated)	85.09 %
% of genes from short scaffolds (< 2000 bps)	70.18 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.263 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (65.789 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (77.193 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13392	HNH_3	4.39
PF00303	Thymidylat_synt	3.51
PF06508	QueC	2.63
PF02142	MGS	2.63
PF13585	CHU_C	1.75
PF13671	AAA_33	1.75
PF01755	Glyco_transf_25	1.75
PF06067	DUF932	0.88
PF03061	4HBT	0.88
PF08279	HTH_11	0.88
PF14743	DNA_ligase_OB_2	0.88
PF13640	2OG-FeII_Oxy_3	0.88
PF13450	NAD_binding_8	0.88
PF01266	DAO	0.88
PF09588	YqaJ	0.88
PF02867	Ribonuc_red_lgC	0.88
PF00085	Thioredoxin	0.88
PF03641	Lysine_decarbox	0.88
PF00722	Glyco_hydro_16	0.88
PF02195	ParBc	0.88
PF02954	HTH_8	0.88
PF07432	Hc1	0.88
PF08800	VirE_N	0.88
PF02037	SAP	0.88
PF00856	SET	0.88
PF13489	Methyltransf_23	0.88
PF00293	NUDIX	0.88
PF04447	dATP-dGTP_PPHyd	0.88
PF13481	AAA_25	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	3.51
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	2.63
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	2.63
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	2.63
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	2.63
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	2.63
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	2.63
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	2.63
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	2.63
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	2.63
COG3306	Glycosyltransferase involved in LPS biosynthesis, GR25 family	Cell wall/membrane/envelope biogenesis [M]	1.75
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.88
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.88
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
All Organisms	root	All Organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Viruses	superkingdom	All Organisms → Viruses	28.07 %
cellular organisms	root	All Organisms → cellular organisms	16.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.91 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.02 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.88 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.02 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %
Candidatus Aenigmarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.02 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.75 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.88 %
unclassified Aenigmarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	5.26 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	1.75 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	1.75 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.88 %
Shirahamavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus	0.88 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.88 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5.26 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	1.75 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	1.75 %
Shirahamavirus PTm1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus → Shirahamavirus PTm1	0.88 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.88 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.63 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	1.75 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1.75 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.88 %
Shirahamavirus PTm1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus → Shirahamavirus PTm1	0.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.88 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	1.75 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1.75 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.88 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	0.88 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.88 %
Shirahamavirus PTm1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus → Shirahamavirus PTm1	0.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.88 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1.75 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1.75 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	0.88 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.88 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.88 %
Shirahamavirus PTm1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus → Shirahamavirus PTm1	0.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.88 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.93 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1.75 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1.75 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	0.88 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.88 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.88 %
Shirahamavirus PTm1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus → Shirahamavirus PTm1	0.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.88 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002144\|M2t2BS2_11141468	Not Available	707	Open in IMG/M
3300003216\|JGI26079J46598_1003074	Not Available	6237	Open in IMG/M
3300003216\|JGI26079J46598_1021488	All Organisms → Viruses → Predicted Viral	1638	Open in IMG/M
3300003346\|JGI26081J50195_1003580	Not Available	5031	Open in IMG/M
3300003346\|JGI26081J50195_1036902	All Organisms → Viruses → Predicted Viral	1025	Open in IMG/M
3300003346\|JGI26081J50195_1054411	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	799	Open in IMG/M
3300003409\|JGI26088J50261_1009142	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3539	Open in IMG/M
3300003409\|JGI26088J50261_1067237	Not Available	617	Open in IMG/M
3300003410\|JGI26086J50260_1002927	All Organisms → cellular organisms → Bacteria	8887	Open in IMG/M
3300003410\|JGI26086J50260_1059614	Not Available	846	Open in IMG/M
3300003427\|JGI26084J50262_1004859	Not Available	6207	Open in IMG/M
3300003617\|JGI26082J51739_10108393	All Organisms → Viruses	688	Open in IMG/M
3300003621\|JGI26083J51738_10030156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1576	Open in IMG/M
3300003621\|JGI26083J51738_10031362	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1521	Open in IMG/M
3300006027\|Ga0075462_10068288	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300006802\|Ga0070749_10533430	Not Available	637	Open in IMG/M
3300006802\|Ga0070749_10691296	Not Available	546	Open in IMG/M
3300006803\|Ga0075467_10061160	All Organisms → Viruses → Predicted Viral	2319	Open in IMG/M
3300007344\|Ga0070745_1130421	Not Available	964	Open in IMG/M
3300007540\|Ga0099847_1001412	All Organisms → cellular organisms → Bacteria	8360	Open in IMG/M
3300007540\|Ga0099847_1074743	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300007540\|Ga0099847_1097077	Not Available	899	Open in IMG/M
3300007540\|Ga0099847_1146841	Not Available	703	Open in IMG/M
3300007540\|Ga0099847_1235145	Not Available	529	Open in IMG/M
3300007623\|Ga0102948_1138289	Not Available	744	Open in IMG/M
3300007623\|Ga0102948_1283430	Not Available	507	Open in IMG/M
3300007725\|Ga0102951_1013582	All Organisms → Viruses → Predicted Viral	2676	Open in IMG/M
3300009000\|Ga0102960_1001863	Not Available	8079	Open in IMG/M
3300009000\|Ga0102960_1002689	Not Available	6820	Open in IMG/M
3300009001\|Ga0102963_1005757	All Organisms → cellular organisms → Bacteria	5385	Open in IMG/M
3300009001\|Ga0102963_1127925	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300009001\|Ga0102963_1355195	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Shirahamavirus → Shirahamavirus PTm1	575	Open in IMG/M
3300009027\|Ga0102957_1392555	Not Available	518	Open in IMG/M
3300009071\|Ga0115566_10236743	All Organisms → Viruses → Predicted Viral	1099	Open in IMG/M
3300009434\|Ga0115562_1080504	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300009436\|Ga0115008_10817083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	684	Open in IMG/M
3300009436\|Ga0115008_11584865	Not Available	508	Open in IMG/M
3300009495\|Ga0115571_1002027	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	13634	Open in IMG/M
3300009496\|Ga0115570_10458324	Not Available	536	Open in IMG/M
3300010150\|Ga0098056_1170376	Not Available	732	Open in IMG/M
3300010150\|Ga0098056_1270844	Not Available	561	Open in IMG/M
3300010296\|Ga0129348_1162282	Not Available	770	Open in IMG/M
3300010368\|Ga0129324_10326268	Not Available	600	Open in IMG/M
3300011261\|Ga0151661_1037183	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	1833	Open in IMG/M
3300017727\|Ga0181401_1042935	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1260	Open in IMG/M
3300017740\|Ga0181418_1010917	Not Available	2471	Open in IMG/M
3300017749\|Ga0181392_1093107	Not Available	903	Open in IMG/M
3300017786\|Ga0181424_10009867	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4129	Open in IMG/M
3300017824\|Ga0181552_10005131	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	9044	Open in IMG/M
3300017824\|Ga0181552_10314175	Not Available	769	Open in IMG/M
3300017951\|Ga0181577_10396498	Not Available	879	Open in IMG/M
3300018048\|Ga0181606_10621221	Not Available	554	Open in IMG/M
3300018080\|Ga0180433_10717905	Not Available	742	Open in IMG/M
3300018413\|Ga0181560_10103284	All Organisms → Viruses → Predicted Viral	1517	Open in IMG/M
3300019739\|Ga0194012_1073215	Not Available	512	Open in IMG/M
3300020056\|Ga0181574_10023642	All Organisms → Viruses → Predicted Viral	4559	Open in IMG/M
3300020165\|Ga0206125_10093657	All Organisms → Viruses → Predicted Viral	1290	Open in IMG/M
3300020166\|Ga0206128_1198685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	770	Open in IMG/M
3300020176\|Ga0181556_1031357	All Organisms → Viruses → Predicted Viral	3002	Open in IMG/M
3300020185\|Ga0206131_10022723	Not Available	5071	Open in IMG/M
3300020185\|Ga0206131_10334459	Not Available	660	Open in IMG/M
3300020185\|Ga0206131_10435931	Not Available	535	Open in IMG/M
3300020187\|Ga0206130_10039329	Not Available	3576	Open in IMG/M
3300020187\|Ga0206130_10110164	All Organisms → Viruses → Predicted Viral	1578	Open in IMG/M
3300020207\|Ga0181570_10477138	Not Available	579	Open in IMG/M
3300021371\|Ga0213863_10341513	Not Available	617	Open in IMG/M
3300021375\|Ga0213869_10117295	All Organisms → Viruses → Predicted Viral	1276	Open in IMG/M
3300021379\|Ga0213864_10000087	Not Available	37099	Open in IMG/M
3300021389\|Ga0213868_10356802	Not Available	820	Open in IMG/M
3300021958\|Ga0222718_10007571	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	8462	Open in IMG/M
3300021958\|Ga0222718_10068612	Not Available	2176	Open in IMG/M
3300021960\|Ga0222715_10165299	All Organisms → Viruses → Predicted Viral	1357	Open in IMG/M
3300021960\|Ga0222715_10338158	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	842	Open in IMG/M
3300021964\|Ga0222719_10541635	Not Available	690	Open in IMG/M
3300021964\|Ga0222719_10730722	Not Available	554	Open in IMG/M
3300022183\|Ga0196891_1092100	Not Available	534	Open in IMG/M
3300022923\|Ga0255783_10204774	Not Available	886	Open in IMG/M
3300022925\|Ga0255773_10018507	All Organisms → Viruses → Predicted Viral	4812	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10000100	All Organisms → cellular organisms → Bacteria	47073	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10010755	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3694	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10400161	Not Available	614	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10240571	Not Available	763	Open in IMG/M
(restricted) 3300024338\|Ga0255043_10041993	Not Available	1372	Open in IMG/M
(restricted) 3300024338\|Ga0255043_10067635	All Organisms → Viruses → Predicted Viral	1127	Open in IMG/M
3300025543\|Ga0208303_1000078	Not Available	37976	Open in IMG/M
3300025543\|Ga0208303_1000244	Not Available	22998	Open in IMG/M
3300025608\|Ga0209654_1058066	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300025617\|Ga0209138_1078290	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300025617\|Ga0209138_1135650	Not Available	656	Open in IMG/M
3300025617\|Ga0209138_1151166	Not Available	595	Open in IMG/M
3300025620\|Ga0209405_1157446	Not Available	579	Open in IMG/M
3300025626\|Ga0209716_1001839	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	14920	Open in IMG/M
3300025636\|Ga0209136_1053515	All Organisms → Viruses → Predicted Viral	1341	Open in IMG/M
3300025674\|Ga0208162_1072436	Not Available	1086	Open in IMG/M
3300025684\|Ga0209652_1023485	Not Available	2932	Open in IMG/M
3300025684\|Ga0209652_1124791	All Organisms → Viruses	707	Open in IMG/M
3300025701\|Ga0209771_1005852	Not Available	6363	Open in IMG/M
3300025767\|Ga0209137_1215108	Not Available	637	Open in IMG/M
3300025803\|Ga0208425_1102602	Not Available	666	Open in IMG/M
3300025809\|Ga0209199_1018367	All Organisms → cellular organisms → Bacteria	4496	Open in IMG/M
3300025879\|Ga0209555_10171033	Not Available	892	Open in IMG/M
3300026183\|Ga0209932_1002594	All Organisms → cellular organisms → Bacteria	5150	Open in IMG/M
3300026183\|Ga0209932_1097647	Not Available	652	Open in IMG/M
3300026187\|Ga0209929_1002334	Not Available	6733	Open in IMG/M
3300027612\|Ga0209037_1030839	All Organisms → Viruses → Predicted Viral	1335	Open in IMG/M
3300027833\|Ga0209092_10428477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	687	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10103281	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10154510	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10626926	Not Available	524	Open in IMG/M
(restricted) 3300027865\|Ga0255052_10599858	Not Available	540	Open in IMG/M
3300027901\|Ga0209427_10772429	Not Available	683	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10139527	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	998	Open in IMG/M
3300028287\|Ga0257126_1010635	All Organisms → Viruses → Predicted Viral	4898	Open in IMG/M
3300028287\|Ga0257126_1190006	Not Available	648	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	86.84%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	11.40%
Freshwater	Environmental → Aquatic → Freshwater	0.88%
Unclassified	Environmental → Aquatic → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	29.82%
Coastal	Environmental → Aquatic → Marine → Coastal	19.30%
Pelagic	Environmental → Aquatic → Marine → Pelagic	12.28%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	10.53%
Inlet	Environmental → Aquatic → Marine → Inlet	8.77%
Strait	Environmental → Aquatic → Marine → Strait	6.14%
Oceanic	Environmental → Aquatic → Marine → Oceanic	5.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.88%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	21.05%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	18.42%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	12.28%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	10.53%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	8.77%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	8.77%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.88%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.88%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	21.05%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	13.16%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	8.77%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	7.89%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	7.02%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	6.14%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	6.14%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.14%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.26%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.39%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.51%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	2.63%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.75%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.88%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.88%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.88%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.88%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002144	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)	Environmental	Open in IMG/M
3300003216	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300003409	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA	Environmental	Open in IMG/M
3300003410	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA	Environmental	Open in IMG/M
3300003427	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA	Environmental	Open in IMG/M
3300003617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA	Environmental	Open in IMG/M
3300003621	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011261	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, 0.02	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019739	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_8-9_MG	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024062 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1	Environmental	Open in IMG/M
3300024338 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_9	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025636	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025684	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027612	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300027865 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027996 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MG	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
M2t2BS2_111414683	3300002144	Marine	KVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK*
JGI26079J46598_10030741	3300003216	Marine	DKVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKNKEK*
JGI26079J46598_10214881	3300003216	Marine	KEEWDKVLAEYGTDTHDKILSMTDDFVQSNRSEVQTYAHYHYDMMADFALHILETFKTKEK*
JGI26081J50195_10035801	3300003346	Marine	WDKVLAEYGTDTHDKILSMTDDFVQSNRSEVQTYAHYHYDMMADFALHILETFKTKEK*
JGI26081J50195_10369023	3300003346	Marine	DKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK*
JGI26081J50195_10544113	3300003346	Marine	LKEEWDKVLAEYGTDTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
JGI26088J50261_100914212	3300003409	Marine	DTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKEK*
JGI26088J50261_10672371	3300003409	Marine	LAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
JGI26086J50260_100292719	3300003410	Marine	TVAEYGTDTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKEK*
JGI26086J50260_10596144	3300003410	Marine	EYGTDTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK*
JGI26084J50262_10048591	3300003427	Marine	VLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKNKEK*
JGI26082J51739_101083931	3300003617	Marine	LSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK*
JGI26083J51738_100301561	3300003621	Marine	EYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKNKEK*
JGI26083J51738_100313621	3300003621	Marine	EYGTDTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKEK*
Ga0075462_100682883	3300006027	Aqueous	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER*
Ga0070749_105334302	3300006802	Aqueous	DDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER*
Ga0070749_106912961	3300006802	Aqueous	SMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFKTKEK*
Ga0075467_100611606	3300006803	Aqueous	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETLNTKER*
Ga0070745_11304211	3300007344	Aqueous	REMTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK*
Ga0099847_10014121	3300007540	Aqueous	KILSMTDYFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
Ga0099847_10747433	3300007540	Aqueous	MTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER*
Ga0099847_10970773	3300007540	Aqueous	MNKEELAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK*
Ga0099847_11468414	3300007540	Aqueous	QSNRKDGEIYSHYHYDMMADFALHILETFNTKER*
Ga0099847_12351451	3300007540	Aqueous	ILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER*
Ga0102948_11382894	3300007623	Water	FVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
Ga0102948_12834303	3300007623	Water	LSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTNEI*
Ga0102951_10135821	3300007725	Water	GTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
Ga0102960_100186326	3300009000	Pond Water	DFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKENG*
Ga0102960_100268911	3300009000	Pond Water	VQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
Ga0102963_10057571	3300009001	Pond Water	KILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKENG*
Ga0102963_11279256	3300009001	Pond Water	FVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEE*
Ga0102963_13551951	3300009001	Pond Water	ILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
Ga0102957_13925551	3300009027	Pond Water	GTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKEIGE*
Ga0115566_102367434	3300009071	Pelagic Marine	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK*
Ga0115562_10805041	3300009434	Pelagic Marine	MKVKEIKTHDKIISMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK*
Ga0115008_108170834	3300009436	Marine	MKVKEIKTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMTDFALHILE
Ga0115008_115848652	3300009436	Marine	MTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMTDFALHILETFNTKEK*
Ga0115571_100202733	3300009495	Pelagic Marine	MKVKEIKTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILET
Ga0115570_104583243	3300009496	Pelagic Marine	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKE
Ga0098056_11703761	3300010150	Marine	MEHIVKTTPKEVLKKEWDKVLAEYGTDTHDNILSMTDDFVQSNRSEGQTYAHYHYDMMAYFALHILETFKTKEK*
Ga0098056_12708442	3300010150	Marine	KEVLKEEWDKVLEEYGTDTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKDNGK*
Ga0129348_11622822	3300010296	Freshwater To Marine Saline Gradient	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNPKER*
Ga0129324_103262683	3300010368	Freshwater To Marine Saline Gradient	MNKEELAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER*
Ga0151661_10371832	3300011261	Marine	MTDDFVQTNRSEGQTYAHYHYDMMADFALHILETFNTKEKWEVVQLQ*
Ga0181401_10429351	3300017727	Seawater	DEFVQSNRGEGQIFADYHYDMMADFALHILETFKTKER
Ga0181418_10109177	3300017740	Seawater	KEVLKKEWDKVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0181392_10931071	3300017749	Seawater	TDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0181424_100098671	3300017786	Seawater	VQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0181552_1000513122	3300017824	Salt Marsh	SMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0181552_103141753	3300017824	Salt Marsh	SMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0181577_103964981	3300017951	Salt Marsh	HIVKTTPKEVLKKEWDKVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0181606_106212213	3300018048	Salt Marsh	MSEVNPNTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0180433_107179051	3300018080	Hypersaline Lake Sediment	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0181560_101032845	3300018413	Salt Marsh	TDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0194012_10732151	3300019739	Sediment	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0181574_1002364225	3300020056	Salt Marsh	REMTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0206125_100936571	3300020165	Seawater	DFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0206128_11986851	3300020166	Seawater	FIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0181556_103135710	3300020176	Salt Marsh	LSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0206131_100227231	3300020185	Seawater	ILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0206131_103344591	3300020185	Seawater	TLKDIKTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMAYFALHILETFKTKEK
Ga0206131_104359312	3300020185	Seawater	MKTIERHDKILSMTDDFVQSNRSEGQTYAHYHYDMMAYFALHILETF
Ga0206130_100393291	3300020187	Seawater	ILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0206130_101101646	3300020187	Seawater	IQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0181570_104771383	3300020207	Salt Marsh	SMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0213863_103415131	3300021371	Seawater	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETF
Ga0213869_101172954	3300021375	Seawater	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETLNTKER
Ga0213864_1000008765	3300021379	Seawater	KILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0213868_103568023	3300021389	Seawater	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEQ
Ga0222718_100075711	3300021958	Estuarine Water	FVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0222718_100686121	3300021958	Estuarine Water	VETTPKEVLKEEWDKVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0222715_101652991	3300021960	Estuarine Water	VQSNRSEGQTYAHYHYDMMADFALHILETFNTNEI
Ga0222715_103381585	3300021960	Estuarine Water	LSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKERWK
Ga0222719_105416354	3300021964	Estuarine Water	DKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0222719_107307224	3300021964	Estuarine Water	LEEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNNEEK
Ga0196891_10921001	3300022183	Aqueous	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKV
Ga0255783_102047741	3300022923	Salt Marsh	TDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKEK
Ga0255773_100185071	3300022925	Salt Marsh	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILET
(restricted) Ga0233412_1000010027	3300023210	Seawater	ILSMTDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKER
(restricted) Ga0233412_1001075512	3300023210	Seawater	YDTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKEK
(restricted) Ga0233412_104001613	3300023210	Seawater	ILSMTDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKEK
(restricted) Ga0255039_102405711	3300024062	Seawater	HDKILSMTDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKEK
(restricted) Ga0255043_100419931	3300024338	Seawater	SMTDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKER
(restricted) Ga0255043_100676356	3300024338	Seawater	EFVESNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0208303_100007873	3300025543	Aqueous	MTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTNSK
Ga0208303_10002441	3300025543	Aqueous	MNKEELAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0209654_10580665	3300025608	Marine	PKEVLKEEWDKVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0209138_10782903	3300025617	Marine	ILSMTDEFVQSNRGEGQTYAHYHYDMMADFALHILDTFNTRDNGKMD
Ga0209138_11356501	3300025617	Marine	FVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0209138_11511663	3300025617	Marine	KILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0209405_11574461	3300025620	Pelagic Marine	MKVKEIKTHDKIISMTDDFVQSNRSEGQTYAHYHYDMMADFALHILE
Ga0209716_10018391	3300025626	Pelagic Marine	MKVKEIKTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMAD
Ga0209136_10535155	3300025636	Marine	HDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0208162_10724361	3300025674	Aqueous	FIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0209652_10234851	3300025684	Marine	DFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0209652_11247913	3300025684	Marine	DTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0209771_10058521	3300025701	Marine	MTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0209137_12151083	3300025767	Marine	LSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0208425_11026021	3300025803	Aqueous	DDFIQSNRKDGEIYSHYHYDMMADFALHILETFNTKER
Ga0209199_10183672	3300025809	Pelagic Marine	MKVKEIKTHDKIISMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0209555_101710331	3300025879	Marine	KEVLKEEWDKVLEEYGTDTHDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKER
Ga0209932_100259415	3300026183	Pond Water	FVQSNRSEGQTYAHYHYDMMADFALHILETFNTKENG
Ga0209932_10976471	3300026183	Pond Water	VQSNRSEGQTYAHYHYDMMADFALHILETFNTKER
Ga0209929_100233422	3300026187	Pond Water	DKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKENG
Ga0209037_10308394	3300027612	Marine	TDTHDKILSMTDEFIQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0209092_104284771	3300027833	Marine	MKVKEIKTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMTDFALHILET
(restricted) Ga0233415_101032814	3300027861	Seawater	TDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKEK
(restricted) Ga0233415_101545104	3300027861	Seawater	SMTDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKEK
(restricted) Ga0233415_106269261	3300027861	Seawater	THDKILSMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
(restricted) Ga0255052_105998583	3300027865	Seawater	EVLKEEWDKVLAEYGTDTHDKILSMTDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKTK
Ga0209427_107724293	3300027901	Marine Sediment	MSEVNPNTHDKILSMTDDFIQSNRKDGEIYSHYHYDMMADFALYILETFKTKER
(restricted) Ga0233413_101395273	3300027996	Seawater	TDDFVQSNRSEGQTYAHYHYDMMADFALHILETFKTKEK
Ga0257126_10106351	3300028287	Marine	SMTDEFVQSNRSEGQTYAHYHYDMMADFALHILETFNTKEK
Ga0257126_11900064	3300028287	Marine	TDEFVESNRSEGQTYAHYHYDMMADFALHILETFNTKER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters