Metagenome / Metatranscriptome Family F081049

Basic Information
Family ID	F081049
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	40 residues
Representative Sequence	MTAADRIIRWSTAGAVIGVAAVAAVASYEHAYDLVRAH
Number of Associated Samples	96
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.71 %
% of genes near scaffold ends (potentially truncated)	80.70 %
% of genes from short scaffolds (< 2000 bps)	77.19 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Bacteria (65.789 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.088 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.719 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.03% β-sheet: 0.00% Coil/Unstructured: 46.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13408	Zn_ribbon_recom	4.39
PF00355	Rieske	3.51
PF00589	Phage_integrase	2.63
PF01965	DJ-1_PfpI	1.75
PF10935	DUF2637	1.75
PF14013	MT0933_antitox	1.75
PF00271	Helicase_C	1.75
PF03853	YjeF_N	1.75
PF01641	SelR	1.75
PF08281	Sigma70_r4_2	1.75
PF13474	SnoaL_3	1.75
PF01176	eIF-1a	0.88
PF13534	Fer4_17	0.88
PF01872	RibD_C	0.88
PF14117	DUF4287	0.88
PF02687	FtsX	0.88
PF08241	Methyltransf_11	0.88
PF01548	DEDD_Tnp_IS110	0.88
PF08240	ADH_N	0.88
PF12697	Abhydrolase_6	0.88
PF07883	Cupin_2	0.88
PF12051	DUF3533	0.88
PF01527	HTH_Tnp_1	0.88
PF07366	SnoaL	0.88
PF13185	GAF_2	0.88
PF01844	HNH	0.88
PF04237	YjbR	0.88
PF03860	DUF326	0.88
PF13191	AAA_16	0.88
PF00196	GerE	0.88
PF13847	Methyltransf_31	0.88
PF04101	Glyco_tran_28_C	0.88
PF00175	NAD_binding_1	0.88
PF02945	Endonuclease_7	0.88
PF01402	RHH_1	0.88
PF14362	DUF4407	0.88
PF13450	NAD_binding_8	0.88
PF13466	STAS_2	0.88
PF00872	Transposase_mut	0.88
PF00067	p450	0.88
PF07969	Amidohydro_3	0.88
PF00248	Aldo_ket_red	0.88
PF13692	Glyco_trans_1_4	0.88
PF13607	Succ_CoA_lig	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	1.75
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	1.75
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG2124	Cytochrome P450	Defense mechanisms [V]	0.88
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.88
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.54 %
Unclassified	root	N/A	32.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.54 %
Unclassified	root	N/A	32.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.79 %
Unclassified	root	N/A	32.46 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.89 %
Unclassified	root	N/A	32.46 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56.14 %
Unclassified	root	N/A	32.46 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.96 %
Unclassified	root	N/A	32.46 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.63 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.75 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.39 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.63 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.75 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.88 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.39 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.63 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.75 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.63 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	1.75 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1.75 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.88 %
Planctomycetaceae bacterium SCGC AG-212-D15	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-D15	0.88 %
Actinomadura meyerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura meyerae	0.88 %
Rhodococcus jostii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.63 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	1.75 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1.75 %
Mycobacterium sp. 852002-50816_SCH5313054-b	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 852002-50816_SCH5313054-b	0.88 %
Planctomycetaceae bacterium SCGC AG-212-D15	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-D15	0.88 %
Actinomadura meyerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura meyerae	0.88 %
Rhodococcus jostii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10224314	Not Available	505	Open in IMG/M
3300003505\|JGIcombinedJ51221_10196376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300005366\|Ga0070659_100399567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1160	Open in IMG/M
3300005436\|Ga0070713_100074536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2875	Open in IMG/M
3300005437\|Ga0070710_11479991	Not Available	510	Open in IMG/M
3300005458\|Ga0070681_10093613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2954	Open in IMG/M
3300005458\|Ga0070681_11811800	Not Available	537	Open in IMG/M
3300005577\|Ga0068857_102184907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	543	Open in IMG/M
3300005921\|Ga0070766_11322097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	500	Open in IMG/M
3300006804\|Ga0079221_11800733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300006864\|Ga0066797_1004570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4503	Open in IMG/M
3300009665\|Ga0116135_1161259	Not Available	842	Open in IMG/M
3300010048\|Ga0126373_11761053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 852002-50816_SCH5313054-b	683	Open in IMG/M
3300010048\|Ga0126373_12444605	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010159\|Ga0099796_10208502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	796	Open in IMG/M
3300010396\|Ga0134126_10460020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1471	Open in IMG/M
3300012096\|Ga0137389_11075847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300012210\|Ga0137378_11446060	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012361\|Ga0137360_11731630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	530	Open in IMG/M
3300012987\|Ga0164307_10946789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300013105\|Ga0157369_11651397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300016357\|Ga0182032_10786921	Not Available	803	Open in IMG/M
3300016404\|Ga0182037_11230789	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	658	Open in IMG/M
3300016422\|Ga0182039_12210017	Not Available	508	Open in IMG/M
3300017821\|Ga0187812_1000427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14835	Open in IMG/M
3300017821\|Ga0187812_1011652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3049	Open in IMG/M
3300017924\|Ga0187820_1213370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	607	Open in IMG/M
3300017928\|Ga0187806_1203589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	671	Open in IMG/M
3300017933\|Ga0187801_10303229	Not Available	650	Open in IMG/M
3300017955\|Ga0187817_10372334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	911	Open in IMG/M
3300018012\|Ga0187810_10104561	Not Available	1114	Open in IMG/M
3300018044\|Ga0187890_10749730	Not Available	552	Open in IMG/M
3300020075\|Ga0206349_1977607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300020077\|Ga0206351_10435179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1359	Open in IMG/M
3300020582\|Ga0210395_10638676	Not Available	798	Open in IMG/M
3300021088\|Ga0210404_10197910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1076	Open in IMG/M
3300021170\|Ga0210400_10979339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii	688	Open in IMG/M
3300021178\|Ga0210408_11026374	Not Available	637	Open in IMG/M
3300021406\|Ga0210386_10419222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1155	Open in IMG/M
3300021406\|Ga0210386_10547293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300021406\|Ga0210386_11237559	Not Available	630	Open in IMG/M
3300021406\|Ga0210386_11736049	Not Available	515	Open in IMG/M
3300021478\|Ga0210402_11218908	Not Available	680	Open in IMG/M
3300021478\|Ga0210402_11526234	Not Available	595	Open in IMG/M
3300025898\|Ga0207692_10410629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300025906\|Ga0207699_10865229	Not Available	666	Open in IMG/M
3300025908\|Ga0207643_10892546	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025910\|Ga0207684_10331602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1311	Open in IMG/M
3300025912\|Ga0207707_11224470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300025913\|Ga0207695_10390649	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-D15	1276	Open in IMG/M
3300025915\|Ga0207693_10096862	Not Available	2313	Open in IMG/M
3300025915\|Ga0207693_10099383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2282	Open in IMG/M
3300025916\|Ga0207663_10086961	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300025917\|Ga0207660_10651552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	859	Open in IMG/M
3300025920\|Ga0207649_10620801	Not Available	833	Open in IMG/M
3300025929\|Ga0207664_10139325	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300025939\|Ga0207665_11123401	Not Available	627	Open in IMG/M
3300026927\|Ga0207744_1004429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1502	Open in IMG/M
3300027619\|Ga0209330_1124598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300028021\|Ga0265352_1005059	Not Available	752	Open in IMG/M
3300028573\|Ga0265334_10302554	Not Available	547	Open in IMG/M
3300028742\|Ga0302220_10347397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura meyerae	535	Open in IMG/M
3300028800\|Ga0265338_11008859	Not Available	563	Open in IMG/M
3300028801\|Ga0302226_10433237	Not Available	549	Open in IMG/M
3300028879\|Ga0302229_10406588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	605	Open in IMG/M
3300030007\|Ga0311338_10831346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	916	Open in IMG/M
3300030580\|Ga0311355_11551290	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031027\|Ga0302308_10842809	Not Available	508	Open in IMG/M
3300031234\|Ga0302325_12266473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	658	Open in IMG/M
3300031543\|Ga0318516_10005521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5759	Open in IMG/M
3300031543\|Ga0318516_10054687	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300031679\|Ga0318561_10260838	Not Available	945	Open in IMG/M
3300031715\|Ga0307476_10186133	Not Available	1503	Open in IMG/M
3300031723\|Ga0318493_10044716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2074	Open in IMG/M
3300031736\|Ga0318501_10018025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2910	Open in IMG/M
3300031751\|Ga0318494_10643122	Not Available	620	Open in IMG/M
3300031778\|Ga0318498_10083312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1444	Open in IMG/M
3300031778\|Ga0318498_10253361	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	793	Open in IMG/M
3300031779\|Ga0318566_10002086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6685	Open in IMG/M
3300031780\|Ga0318508_1087773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856	Open in IMG/M
3300031798\|Ga0318523_10101202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1413	Open in IMG/M
3300031799\|Ga0318565_10086364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1495	Open in IMG/M
3300031805\|Ga0318497_10230218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300031805\|Ga0318497_10251411	Not Available	980	Open in IMG/M
3300031823\|Ga0307478_10577988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300031845\|Ga0318511_10568794	Not Available	527	Open in IMG/M
3300031879\|Ga0306919_10048095	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2807	Open in IMG/M
3300031879\|Ga0306919_10515981	Not Available	921	Open in IMG/M
3300031894\|Ga0318522_10430463	Not Available	500	Open in IMG/M
3300031910\|Ga0306923_10003207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15279	Open in IMG/M
3300031941\|Ga0310912_10358467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1133	Open in IMG/M
3300031941\|Ga0310912_10672093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300031942\|Ga0310916_10558498	Not Available	974	Open in IMG/M
3300031946\|Ga0310910_10041700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3191	Open in IMG/M
3300031959\|Ga0318530_10038372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1756	Open in IMG/M
3300032009\|Ga0318563_10491763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300032042\|Ga0318545_10299875	Not Available	578	Open in IMG/M
3300032044\|Ga0318558_10003661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5234	Open in IMG/M
3300032044\|Ga0318558_10247809	Not Available	876	Open in IMG/M
3300032055\|Ga0318575_10093263	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300032065\|Ga0318513_10000727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9485	Open in IMG/M
3300032074\|Ga0308173_10231183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1555	Open in IMG/M
3300032089\|Ga0318525_10010066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4241	Open in IMG/M
3300032089\|Ga0318525_10056657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1953	Open in IMG/M
3300032805\|Ga0335078_10684739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1274	Open in IMG/M
3300032895\|Ga0335074_10001382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32902	Open in IMG/M
3300032895\|Ga0335074_10598200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1102	Open in IMG/M
3300032895\|Ga0335074_11442075	Not Available	553	Open in IMG/M
3300032898\|Ga0335072_10005013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19539	Open in IMG/M
3300033134\|Ga0335073_10026384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8029	Open in IMG/M
3300033134\|Ga0335073_10421656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1552	Open in IMG/M
3300033290\|Ga0318519_10035086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2404	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.98%
Host-Associated	Host-Associated	7.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.21%
Aquatic	Environmental → Aquatic	8.77%
Plants	Host-Associated → Plants	7.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.07%
Freshwater	Environmental → Aquatic → Freshwater	8.77%
Peat	Environmental → Terrestrial → Peat	6.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.26%
Loam	Environmental → Terrestrial → Soil → Loam	15.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.40%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.14%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.51%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028021	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE5	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081049

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_102243142	3300003219	Bog Forest Soil	MAADRVIRWTTAGAVAGVAAMASHEHAHALVRAHGEAGRT
JGIcombinedJ51221_101963762	3300003505	Forest Soil	VTAADRVIRWTTAVTVIVVAAVAAAAPYDHAYALVRAHGGAGWTA
Ga0070659_1003995671	3300005366	Corn Rhizosphere	MAADRLIRWSTALAVLGVAAVGATASYEHAYDLMRAHCKSG*
Ga0070713_1000745364	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTAADRVIRWSTALAVLGIAVVAAVVSYEHAYALVRAHGE
Ga0070710_114799912	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSGTDRVIKWSTAFAVLAVAAVASYEHAYDLVRAHGEEGGRRI*
Ga0070681_100936133	3300005458	Corn Rhizosphere	MAADRLIGWSTALAVLGVAAVGATASYEHAYDLMRAHCKSG*
Ga0070681_118118002	3300005458	Corn Rhizosphere	VTATERIIRWSTAGAVVGVAAVAAVASYDHAYALVSTHVEAGWTGRL
Ga0068857_1021849072	3300005577	Corn Rhizosphere	AADRLIGWSTALAVLGVAAVGATASYEHAYDLMRAHCKSG*
Ga0070766_113220972	3300005921	Soil	CWWCPVMAADRVIRWTTAVAVISVVAVAAAASYEHA*
Ga0079221_118007331	3300006804	Agricultural Soil	MSGAEPIIRWSTAFTVLGVAAVAAVASYEHAYDLVRAH
Ga0066797_10045705	3300006864	Soil	MTAVDRITRWTTALAVVGVAAVAAVASYEHAYALVRA*
Ga0116135_11612591	3300009665	Peatland	MMAADRVIRWSTALAVLGVAAVAAVASYEHAYDLVRPTVS
Ga0126373_117610531	3300010048	Tropical Forest Soil	VTAADRVIRWTTAGAVVGVAAVAAVGSYEHAYDLV
Ga0126373_124446052	3300010048	Tropical Forest Soil	MTAADRIMRWTAAVAVIGVAAVAAVVSYEHAYALVRAH
Ga0099796_102085022	3300010159	Vadose Zone Soil	MTAADRIIRWSTAGAVIGVAAVAAVASYEHAYDLVRAH
Ga0126379_134699681	3300010366	Tropical Forest Soil	MSGADRVIRWSTAGAVLGVAAVAAVASYEHAYDLSWLRLVRI
Ga0126381_1012760481	3300010376	Tropical Forest Soil	MSGADRVIRWSTAGAVLGVAAVAAVASYEHAYDLSWLRLVRISVAAGDGF*
Ga0134126_104600201	3300010396	Terrestrial Soil	VNVTGRVIAWSTALAVLGVAGVAAVASYEHAYDLVRAHGEAGWTARLV
Ga0137389_110758472	3300012096	Vadose Zone Soil	MAADRVIRWTTAGAVAGVAAMASYEHAHALVRAHGEAGRTG
Ga0137378_114460601	3300012210	Vadose Zone Soil	MSSGDRLIRWSTAVAVLGVAAVAAVASYEHACRLHS
Ga0137360_117316302	3300012361	Vadose Zone Soil	MRGADRVIRWSTAGVVVDVATVAAVASYEHVYALVRAHGE
Ga0164307_109467893	3300012987	Soil	IRRATAGAIIVVAAFTAVAPYEHAYDLVHAHGEVG*
Ga0157369_116513971	3300013105	Corn Rhizosphere	MNAADRVMRWSTALAVLGVAAIAAVVSYEHAGALVRAH
Ga0182032_107869212	3300016357	Soil	MTTTGQIIRWSTAGAVVGVAAVAAVASYEHAYALVRA
Ga0182037_112307891	3300016404	Soil	MTAGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGETGWI
Ga0182039_122100171	3300016422	Soil	MMAADRVIRWSTAGAVLGVAAVAAVASHEHASDLVLPSKT
Ga0187812_100042713	3300017821	Freshwater Sediment	MTSTGQIIRWSTAGAVVGVAAVAAVASYEHAYALVRAH
Ga0187812_10116523	3300017821	Freshwater Sediment	MMAADRFIRWTTAGAVPGVAAVAAVASCEHAYDLLRAHGEAG
Ga0187820_12133702	3300017924	Freshwater Sediment	MSAADRVVRWSTALAALGVALVAAVVSYEHAGDLVRRMPPHSG
Ga0187806_12035891	3300017928	Freshwater Sediment	MTGADRVIRWSTAFAVLGVAAVAAVASYEHAYDLVRAH
Ga0187801_103032292	3300017933	Freshwater Sediment	MAADRVIRWTTEGAVAGAAAMASYEHAYALVQAHGE
Ga0187817_103723342	3300017955	Freshwater Sediment	MTADRVIRWTTAGAVIGVAALASYEHAYDLVRAHGETGWT
Ga0187810_101045611	3300018012	Freshwater Sediment	MAADRVIRWTTAGAVIAVAAMASYEHPSAFVRVHGQAARP
Ga0187890_107497301	3300018044	Peatland	MAADRVIRWTTAVAVIAVIAVASYEHAYDLVRAHGEAGWTARLV
Ga0206349_19776074	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MAADRVIRRAIAGAIIVVAAFTAVAPYEHAYDLVHAHGEVG
Ga0206351_104351791	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MMAADRVIRWSTAGVVIGVAAVAAAASYEHACDLVRAHGEAGRR
Ga0210395_106386761	3300020582	Soil	MTGTDKAIRWSTAAAVIGVAVVAAVVSYEHAYALV
Ga0210404_101979101	3300021088	Soil	MAADRVIRWTTAVAVIGVAAVAAVASYEHAYDLVRA
Ga0210400_109793391	3300021170	Soil	MIGADRTIRWSTAAAVIGVAVVAAAVSYEHGYALVRVHGEV
Ga0210408_110263742	3300021178	Soil	MAADRVIRWTTAVTVIVVAAVAAAAPYYHAYALVRAHGGAGWTA
Ga0210386_104192223	3300021406	Soil	MTAADRIIRWATAGAVIGVAAVAAVASYEHAYALVQVH
Ga0210386_105472931	3300021406	Soil	MTAADRVIRWSTALAVIGVAAVAAVVANEHASPLVRAHG
Ga0210386_112375592	3300021406	Soil	MNADRVIRWSTALAVVGVDAVAAVVSYEHASALVREHGE
Ga0210386_117360491	3300021406	Soil	MNAADRVIRWSTALAVVGVAVVATVVSYEHASDLVREHG
Ga0210402_112189082	3300021478	Soil	VTAADRVIRWTTAVAVIGVAAVAAIASYEHAYDLVRAHGEAG
Ga0210402_115262342	3300021478	Soil	MTGANRVIRWSIAGAVVGMAAVASCEHAHALMRAHGEIIIA
Ga0207692_104106292	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTAADRIIRWTTAVAVIGVAAIAAVVSYKHAGDLVRAHG
Ga0207699_108652291	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRSEDRVIRWSTALAVLGVAAVAAVASYEHAYEFLR
Ga0207643_108925462	3300025908	Miscanthus Rhizosphere	MAADRLIRWSTALAVLGVAAVGATASYEHAYDLMRAHCKSG
Ga0207684_103316023	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSTADRVIQWSTALAVLGIAGVAAVASYEHAYDLVRAHGAA
Ga0207707_112244701	3300025912	Corn Rhizosphere	MTGTDKAIRWSTAAAVIGVAAVAAVVSYEHAYDLVHAHSETG
Ga0207695_103906491	3300025913	Corn Rhizosphere	MSGDDRVTRWSTAVAVLGVAAVAVVASYEHAYVATTVC
Ga0207693_100968625	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAADWVIRWTTAVTVIVVAAVAAAAPYEHAYALVRAH
Ga0207693_100993831	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAADRVIRWTTAVTVIVVAAVAAAAPYEHAYALVRAH
Ga0207663_100869618	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSGADPIIRWSTAFTVLGVAAVAAVASYEHAYDLVRAHVS
Ga0207660_106515521	3300025917	Corn Rhizosphere	MAADRLIGWSTALAVLGVAAVGATASYEHAYDLMRAHCKSG
Ga0207649_106208011	3300025920	Corn Rhizosphere	MSGDDRVTRWSTAVAVLGVAAVAVVASYEHAYVWLRRFAL
Ga0207664_101393255	3300025929	Agricultural Soil	MAADRVIWWATAGAVVGVAAVAPYEHAYALVLAHAEAGGRAAGFQ
Ga0207665_111234011	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAGTDKAIRWSTAAAVIGVAVVAAVVSYEHAYALV
Ga0207744_10044293	3300026927	Tropical Forest Soil	MTTGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGETGWIGRL
Ga0209330_11245982	3300027619	Forest Soil	MTAADRVIRSTTAVAVIGVAVIAAVVSYEDAGDLVRAHG
Ga0265352_10050591	3300028021	Soil	MAADRVIRWTSAAAVIGVAAVTAVASYEHAYHLVRARGAGVDGPA
Ga0265334_103025541	3300028573	Rhizosphere	VNDADRVIRWSTALAVLGVAAVAATASYEHAYDLVRDQELG
Ga0302220_103473971	3300028742	Palsa	MAADRVIRWTTAVAAIGVAAVASCEHAYDLVRAHGEAGWTAPLVPLTVGGLIYAS
Ga0265338_110088592	3300028800	Rhizosphere	MTAADRIIRWSTALAVLGVAAIAAVVSYEHAGDLVRAH
Ga0302226_104332371	3300028801	Palsa	MNTADRVIRWSTAVAVLGVAAVAAAASCEDGCDLVRAHGEAGWTA
Ga0302229_104065881	3300028879	Palsa	MTADRVIRWTTAGAVVGVAAVAAVASYEHAYALVVAHGEA
Ga0311338_108313461	3300030007	Palsa	VNGADRIIRWTTAGAVLGVAAVAAVASYEHAYALVRA
Ga0311355_115512901	3300030580	Palsa	MSAADRVIRWSTAGAVIGVAAVAAVVAYEHAYAPV
Ga0302308_108428091	3300031027	Palsa	MTADRVIRWTTAGAVVGVAAVAAVASYEHAYALVVA
Ga0302325_122664731	3300031234	Palsa	VTAADRVIRWTTAGAVAGVAAVAAVASYEHAYALVR
Ga0318516_100055211	3300031543	Soil	MTTGQIIRWSTAGAVIGVAAVAEVASYEHAYAPVRAHGETG
Ga0318516_100546871	3300031543	Soil	MTTGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGETGWI
Ga0318561_102608382	3300031679	Soil	MTTGQIIRWSTAGAVVGVAAVAAVAPCEHAYALVRAHGETGWI
Ga0307476_101861331	3300031715	Hardwood Forest Soil	MTTTEHVIRWSTAGAVLGVAAVAAVASYEHAYDLVRMH
Ga0318493_100447161	3300031723	Soil	MTTGQIIRWSTAGAVIGVAAVASYEHAYALVRAHGE
Ga0318501_100180254	3300031736	Soil	MTTGQIIRWSTAGAVIGVAAVASYEHACALVRAHGETGW
Ga0318494_106431221	3300031751	Soil	MSVADRTIRWSTAGIVLGVAAVAAVASYEPAYDLVRAHGES
Ga0318498_100833122	3300031778	Soil	MTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAH
Ga0318498_102533611	3300031778	Soil	MTAGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGETGWIGRL
Ga0318566_100020861	3300031779	Soil	MTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVR
Ga0318508_10877731	3300031780	Soil	MTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAHGETG
Ga0318523_101012023	3300031798	Soil	MTTGQIIRWSTAGAVIGVAAVASYEHAYALVRAHGET
Ga0318565_100863643	3300031799	Soil	MTTGQIIRWSTAGAVIGVAAVASYEHAYALVRAHGETGW
Ga0318497_102302182	3300031805	Soil	MTTGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGETG
Ga0318497_102514112	3300031805	Soil	MTTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAHGETGWIG
Ga0307478_105779882	3300031823	Hardwood Forest Soil	MSGADRVIRWSTAFAVLGVTAVAATASYEHAYDLVRA
Ga0318511_105687941	3300031845	Soil	MTTTGQIIRWSTPEAVVGVAAVAAVASYEHAYALVRA
Ga0306919_100480951	3300031879	Soil	MTTTGQIIRWSTAGAVAGVAAVAAVASYEHACALVRAHGETGWIG
Ga0306919_105159812	3300031879	Soil	MTSAGQISRWCTAGTVVGVAAVAAVASYEHAYALVR
Ga0318522_104304631	3300031894	Soil	MTTGQIIRWSTARAVAGVAAVAAVASCEHAYALVRAHGETGW
Ga0306923_1000320715	3300031910	Soil	MTTGQIIRWSTAGAVVGVAAVAAVAPCENAYALVRAHGE
Ga0310912_103584672	3300031941	Soil	MTSGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRA
Ga0310912_106720932	3300031941	Soil	MTTGQIIRWSTAGAVIGVAAVASYEHACALVRAHGETG
Ga0310916_105584981	3300031942	Soil	MTTGQVIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGETGWI
Ga0310910_100417002	3300031946	Soil	MTTGQIIRWSTAGSVIGVAAVAEVASYEHAYAPVRAHGETG
Ga0318530_100383722	3300031959	Soil	MTTGQIIRWSTAGAVIGVAAVASYEHAYAPVRAHGETG
Ga0318563_104917631	3300032009	Soil	VTAAEQVIRWSTAGAVVGVAAVAAVVSYEHPYVLVRAHGEAG
Ga0318545_102998751	3300032042	Soil	MTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAHG
Ga0318558_100036611	3300032044	Soil	MTTGQIIRWSTAGAVVGVAAVAAVAPCEHAYALVRAHGETG
Ga0318558_102478092	3300032044	Soil	MTTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAHGETGW
Ga0318575_100932632	3300032055	Soil	MTTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAHGE
Ga0318513_100007271	3300032065	Soil	MTTGQIIRWSTAGAVVGVAAVAAVAPCEHAYALVR
Ga0308173_102311831	3300032074	Soil	MTSADRIIRWSTALAVIGVAAVAAVVSYEHASDLVREHGVS
Ga0318525_100100668	3300032089	Soil	MTAGQIIRWSTAGAVAGVAAVAAVASCEHAYALVRAHGE
Ga0318525_100566571	3300032089	Soil	MTTGQIIRWSTAGAVVGVAAVAAVASCEHAYALVRAHGETGWIGR
Ga0335078_106847393	3300032805	Soil	MSAADRIIRWSTAGAVVRVAAVAAVASYEHAYDLVRAHGESFAASRAHMLP
Ga0335074_1000138219	3300032895	Soil	MVVDRVIWWTTGAAVIGVAAVAAVASYEHLFDLVRAHGRLGRRFDWSRSPWTG
Ga0335074_105982003	3300032895	Soil	MTVVDGVIRWTTVGAVLGVAAVAAVASYEHAYDLVRVHG
Ga0335074_114420752	3300032895	Soil	VSGAGRVIRWSTALAVLGVAAVASVASYEHAYDFVRMHGED
Ga0335072_100050132	3300032898	Soil	MAVDRVIWWTTGAAVIGVAAVAAVASYEHLFDLVRAHGRLGRRFDWSRSPWTG
Ga0335073_100263845	3300033134	Soil	MNAADRMIRWSAALAVVSVAVVAAVVSYEHRSTLAREHGESDCT
Ga0335073_104216562	3300033134	Soil	MNVVDRVIRWLTALAVVGVAAVAAVVSYEHASALVRAYGESRVGPGA
Ga0318519_100350861	3300033290	Soil	MTTGQIIRWSTAGAVVGVAAVAAVAPCEHAYALVRAHGE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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