NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080938

Metagenome / Metatranscriptome Family F080938

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080938
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 49 residues
Representative Sequence MPKNKNVLMNIHGVDFQIDDKNYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Number of Associated Samples 86
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 32.46 %
% of genes from short scaffolds (< 2000 bps) 81.58 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (89.474 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater
(17.544 % of family members)
Environment Ontology (ENVO) Unclassified
(66.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(69.298 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.10%    β-sheet: 0.00%    Coil/Unstructured: 54.90%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF00665rve 22.81
PF13604AAA_30 7.02
PF01443Viral_helicase1 0.88
PF01844HNH 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 22.81
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 22.81
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 22.81
COG4584TransposaseMobilome: prophages, transposons [X] 22.81


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A89.47 %
All OrganismsrootAll Organisms10.53 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000756|JGI12421J11937_10065574Not Available1110Open in IMG/M
3300002305|B570J29619_1002963Not Available1408Open in IMG/M
3300002305|B570J29619_1003074Not Available1379Open in IMG/M
3300002382|B570J29648_100181Not Available4921Open in IMG/M
3300002396|B570J29629_1002634Not Available1428Open in IMG/M
3300002408|B570J29032_109255473Not Available657Open in IMG/M
3300002408|B570J29032_109345156Not Available703Open in IMG/M
3300004796|Ga0007763_11479022Not Available952Open in IMG/M
3300004802|Ga0007801_10144918Not Available678Open in IMG/M
3300004806|Ga0007854_10292720Not Available675Open in IMG/M
3300004806|Ga0007854_10344157Not Available612Open in IMG/M
3300005421|Ga0068882_1662484Not Available683Open in IMG/M
3300005527|Ga0068876_10029941Not Available3394Open in IMG/M
3300005527|Ga0068876_10594836Not Available599Open in IMG/M
3300005528|Ga0068872_10075605Not Available2051Open in IMG/M
3300005662|Ga0078894_11036701Not Available704Open in IMG/M
3300005805|Ga0079957_1370384Not Available618Open in IMG/M
3300007202|Ga0103274_1142914Not Available1290Open in IMG/M
3300007561|Ga0102914_1168554Not Available675Open in IMG/M
3300007600|Ga0102920_1183061Not Available672Open in IMG/M
3300007861|Ga0105736_1112905Not Available598Open in IMG/M
3300008107|Ga0114340_1024632All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata3411Open in IMG/M
3300008108|Ga0114341_10368892Not Available712Open in IMG/M
3300008110|Ga0114343_1071176All Organisms → cellular organisms → Eukaryota → Opisthokonta2228Open in IMG/M
3300008111|Ga0114344_1105957Not Available1829Open in IMG/M
3300008113|Ga0114346_1097430Not Available1354Open in IMG/M
3300008114|Ga0114347_1033251Not Available3115Open in IMG/M
3300008114|Ga0114347_1054638Not Available2578Open in IMG/M
3300008116|Ga0114350_1028689Not Available3054Open in IMG/M
3300008116|Ga0114350_1054164All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata1440Open in IMG/M
3300008117|Ga0114351_1035225Not Available3236Open in IMG/M
3300008119|Ga0114354_1102571All Organisms → cellular organisms → Eukaryota → Opisthokonta1131Open in IMG/M
3300008119|Ga0114354_1206068Not Available677Open in IMG/M
3300008119|Ga0114354_1206087Not Available677Open in IMG/M
3300008120|Ga0114355_1129123Not Available935Open in IMG/M
3300008258|Ga0114840_1001035All Organisms → cellular organisms → Eukaryota → Opisthokonta5447Open in IMG/M
3300008259|Ga0114841_1021035All Organisms → cellular organisms → Eukaryota → Opisthokonta3413Open in IMG/M
3300008261|Ga0114336_1204325Not Available827Open in IMG/M
3300009151|Ga0114962_10260163Not Available985Open in IMG/M
3300009151|Ga0114962_10683645Not Available526Open in IMG/M
3300009152|Ga0114980_10477168Not Available711Open in IMG/M
3300009154|Ga0114963_10426662Not Available715Open in IMG/M
3300009185|Ga0114971_10221450Not Available1115Open in IMG/M
3300009187|Ga0114972_10345175Not Available870Open in IMG/M
3300009187|Ga0114972_10658680Not Available581Open in IMG/M
3300010885|Ga0133913_11137305Not Available2007Open in IMG/M
3300010885|Ga0133913_11756217Not Available1556Open in IMG/M
3300010970|Ga0137575_10080488Not Available519Open in IMG/M
3300012715|Ga0157599_1135130Not Available968Open in IMG/M
3300013006|Ga0164294_10336371Not Available1042Open in IMG/M
3300013295|Ga0170791_15618817Not Available1216Open in IMG/M
3300020048|Ga0207193_1033792Not Available5807Open in IMG/M
3300020048|Ga0207193_1158802Not Available1877Open in IMG/M
3300020151|Ga0211736_10584786Not Available556Open in IMG/M
3300020157|Ga0194049_1074449Not Available897Open in IMG/M
3300020160|Ga0211733_11122916All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata1971Open in IMG/M
3300020162|Ga0211735_11015568Not Available799Open in IMG/M
3300020162|Ga0211735_11366922Not Available1299Open in IMG/M
3300020172|Ga0211729_10136617Not Available923Open in IMG/M
3300020172|Ga0211729_11131864Not Available583Open in IMG/M
3300020493|Ga0208591_1009151Not Available1449Open in IMG/M
3300020502|Ga0208087_1006048All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata1845Open in IMG/M
3300020503|Ga0208363_1006720Not Available1687Open in IMG/M
3300020505|Ga0208088_1022678Not Available812Open in IMG/M
3300020512|Ga0207936_1005562All Organisms → cellular organisms → Eukaryota → Opisthokonta2117Open in IMG/M
3300020520|Ga0208481_1007417Not Available2055Open in IMG/M
3300020520|Ga0208481_1012355All Organisms → cellular organisms → Bacteria → Proteobacteria1450Open in IMG/M
3300020521|Ga0208482_1040305Not Available589Open in IMG/M
3300020532|Ga0208601_1043296Not Available638Open in IMG/M
3300020542|Ga0208857_1060120Not Available564Open in IMG/M
3300020548|Ga0208856_1051284Not Available536Open in IMG/M
3300020558|Ga0208362_1031612Not Available910Open in IMG/M
3300020561|Ga0207934_1020209Not Available1121Open in IMG/M
3300020561|Ga0207934_1033724Not Available871Open in IMG/M
3300020569|Ga0208229_1012903Not Available1558Open in IMG/M
3300020575|Ga0208053_1004214All Organisms → cellular organisms → Bacteria → Proteobacteria3241Open in IMG/M
3300020732|Ga0214201_1026363Not Available991Open in IMG/M
3300021108|Ga0214162_1000710Not Available7511Open in IMG/M
3300025591|Ga0208496_1025898Not Available1523Open in IMG/M
3300025591|Ga0208496_1042313Not Available1110Open in IMG/M
3300025838|Ga0208872_1200898Not Available662Open in IMG/M
3300027697|Ga0209033_1153056Not Available716Open in IMG/M
3300027797|Ga0209107_10308247Not Available743Open in IMG/M
3300027804|Ga0209358_10424092Not Available622Open in IMG/M
3300027836|Ga0209230_10731516Not Available543Open in IMG/M
3300027899|Ga0209668_10031343Not Available2729Open in IMG/M
3300028027|Ga0247722_10258900Not Available602Open in IMG/M
3300031758|Ga0315907_10595080Not Available859Open in IMG/M
3300031758|Ga0315907_10615884Not Available840Open in IMG/M
3300031784|Ga0315899_10120800Not Available2687Open in IMG/M
3300031784|Ga0315899_10688803Not Available951Open in IMG/M
3300031784|Ga0315899_10730268Not Available916Open in IMG/M
3300031784|Ga0315899_10763740Not Available889Open in IMG/M
3300031784|Ga0315899_11780065Not Available503Open in IMG/M
3300031786|Ga0315908_11028412Not Available662Open in IMG/M
3300031786|Ga0315908_11143920Not Available620Open in IMG/M
3300031786|Ga0315908_11396733Not Available549Open in IMG/M
3300031786|Ga0315908_11466535Not Available532Open in IMG/M
3300032092|Ga0315905_11443878Not Available544Open in IMG/M
3300032093|Ga0315902_10541783Not Available998Open in IMG/M
3300033984|Ga0334989_0202845Not Available1089Open in IMG/M
3300033984|Ga0334989_0223544Not Available1028Open in IMG/M
3300034050|Ga0335023_0623022Not Available546Open in IMG/M
3300034060|Ga0334983_0484381Not Available696Open in IMG/M
3300034060|Ga0334983_0583470Not Available613Open in IMG/M
3300034066|Ga0335019_0072145Not Available2337Open in IMG/M
3300034103|Ga0335030_0913245Not Available504Open in IMG/M
3300034107|Ga0335037_0181270Not Available1153Open in IMG/M
3300034111|Ga0335063_0334946Not Available788Open in IMG/M
3300034116|Ga0335068_0239815Not Available930Open in IMG/M
3300034121|Ga0335058_0665960Not Available577Open in IMG/M
3300034167|Ga0335017_0056275Not Available2323Open in IMG/M
3300034280|Ga0334997_0180594All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata1394Open in IMG/M
3300034280|Ga0334997_0316369Not Available1004Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater17.54%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton14.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater14.04%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater11.40%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater8.77%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake7.89%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake7.02%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.14%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment1.75%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment1.75%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.75%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.88%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.88%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.88%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.88%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.88%
Pond Fresh WaterEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water0.88%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.88%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300002305Freshwater microbial communities from Lake Mendota, WI - 03OCT2011 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002382Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002396Freshwater microbial communities from Lake Mendota, WI - 13OCT2010 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300004796Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004802Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2MEnvironmentalOpen in IMG/M
3300004806Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08EnvironmentalOpen in IMG/M
3300005421Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005528Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaGEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300007202Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Monthly Sampling-Site C) 9 sequencing projectsEnvironmentalOpen in IMG/M
3300007561Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3EnvironmentalOpen in IMG/M
3300007600Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3EnvironmentalOpen in IMG/M
3300007861Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009185Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300010970Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1, april 2016EnvironmentalOpen in IMG/M
3300012715Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020157Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25mEnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020493Freshwater microbial communities from Lake Mendota, WI - 14NOV2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020502Freshwater microbial communities from Lake Mendota, WI - 29OCT2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020503Freshwater microbial communities from Lake Mendota, WI - 03MAY2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020505Freshwater microbial communities from Lake Mendota, WI - 02APR2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020512Freshwater microbial communities from Lake Mendota, WI - 19NOV2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020520Freshwater microbial communities from Lake Mendota, WI - 02JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020521Freshwater microbial communities from Lake Mendota, WI - 26SEP2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020532Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020542Freshwater microbial communities from Lake Mendota, WI - 05NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020548Freshwater microbial communities from Lake Mendota, WI - 13JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020558Freshwater microbial communities from Lake Mendota, WI - 13OCT2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020561Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020569Freshwater microbial communities from Lake Mendota, WI - 22AUG2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020575Freshwater microbial communities from Lake Mendota, WI - 20MAY2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020732Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnionEnvironmentalOpen in IMG/M
3300021108Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnionEnvironmentalOpen in IMG/M
3300025591Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2M (SPAdes)EnvironmentalOpen in IMG/M
3300025838Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)EnvironmentalOpen in IMG/M
3300027697Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300028027Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FCEnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031786Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300033984Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030EnvironmentalOpen in IMG/M
3300034050Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095EnvironmentalOpen in IMG/M
3300034060Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034121Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174EnvironmentalOpen in IMG/M
3300034167Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082EnvironmentalOpen in IMG/M
3300034280Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12421J11937_1006557423300000756Freshwater And SedimentMPKNKNVLMNINGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
B570J29619_100296323300002305FreshwaterMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
B570J29619_100307413300002305FreshwaterMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY*
B570J29648_10018113300002382FreshwaterLYKMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY*
B570J29629_100263443300002396FreshwaterMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQQCF*
B570J29032_10925547323300002408FreshwaterMLYYIIMPENNNVLMQIGGVNIYVNDKNYKHFNSLPKSQQEAIKQTMILGMLNNK*
B570J29032_10934515623300002408FreshwaterMPKNKNVLMNINGVDFHIDDKNYKHFKSLPKIQQEAVKQMMILGLLKNEYD*
Ga0007763_1147902223300004796Freshwater LakeMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY*
Ga0007801_1014491823300004802FreshwaterMEEENKNVLMNIGGVKIYINDTSYEHFNLLPKSQQEAIKQTMILDMLNDRYY*
Ga0007854_1029272023300004806FreshwaterMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0007854_1034415723300004806FreshwaterMPKNKNVLMNINRVDFHIDDNNYKHFKSLPKIQQEAVKQYMLLGLLKSVYD*
Ga0068882_166248423300005421Freshwater LakeMPKNKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY*
Ga0068876_1002994123300005527Freshwater LakeMNINGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0068876_1059483623300005527Freshwater LakeMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0068872_1007560533300005528Freshwater LakeMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTIILGMLNDRYY*
Ga0078894_1103670123300005662Freshwater LakeMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAVKQMMILSMLKDRYY
Ga0079957_137038423300005805LakeMPKNKNVLMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0103274_114291423300007202Freshwater LakeMPKNKNVLMNVEGVDFYINDNLFKHFKSLPKMQQEAVKQMMILGMLNNK*
Ga0102914_116855423300007561EstuarineMPKNKNVLMNIYGVDFHIDDNSYKHFKSLPKKQQEAIKQTMLLSMLNDRYY*
Ga0102920_118306113300007600EstuarineMPKNKNVLMNVHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY*
Ga0105736_111290523300007861Estuary WaterIKLIYIYFIVMVKENLDNVLMNIGGVNIYVSDKNYTHFNSLPKSQQEAIKQMMTLKLLQEKYDK*
Ga0114340_102463213300008107Freshwater, PlanktonIIYIMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY*
Ga0114341_1036889213300008108Freshwater, PlanktonMPKNKNVLMNINGVDFHIDDNNYKHFKSLPKIQQEAVKQYMLLGLLKSVYD*
Ga0114343_107117633300008110Freshwater, PlanktonILYYIYIMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0114344_110595733300008111Freshwater, PlanktonMPKNKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0114346_109743023300008113Freshwater, PlanktonDIGGVKIYVNDKNYELFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0114347_103325133300008114Freshwater, PlanktonQNVLMDIGGVKIYVNDKNYEHFNSLPKSQQEAIKQTMLLSMLNDRYY*
Ga0114347_105463813300008114Freshwater, PlanktonYIYIMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0114350_102868933300008116Freshwater, PlanktonMPKNKNVLMNIYGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0114350_105416433300008116Freshwater, PlanktonYYIYIMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY*
Ga0114351_103522513300008117Freshwater, PlanktonVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0114354_110257123300008119Freshwater, PlanktonIYYNIYIMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY*
Ga0114354_120606813300008119Freshwater, PlanktonKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY*
Ga0114354_120608723300008119Freshwater, PlanktonKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0114355_112912313300008120Freshwater, PlanktonMPKNKNVLMNIHGVDFHIDDNNYKHFKSLPKMQQEAVKQYMLLGLLKSVYD*
Ga0114840_100103543300008258Freshwater, PlanktonKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0114841_102103533300008259Freshwater, PlanktonYYIIYIMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY*
Ga0114336_120432523300008261Freshwater, PlanktonIFSILYKMPKNKNVLMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0114962_1026016323300009151Freshwater LakeMNIGGVKIYVNDTNYEHFNSLPKSQQEAIKQTMILGMLNDRYY*
Ga0114962_1068364523300009151Freshwater LakeMAKNKNKNVLMNFAGVNFYLSDANHEHFQTLTIDQQEAVKQMMIFKMLQDKYD*
Ga0114980_1047716833300009152Freshwater LakeHIDDNSYKHFKSLPKKQQEAIKQTMILGMLNDRYY*
Ga0114963_1042666223300009154Freshwater LakeMPKNKNVLMNIYGVDFHIDDNSYKHFKSLPKKQQEAIKQTMILGMLNDRYY*
Ga0114971_1022145023300009185Freshwater LakeMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKSQQEAIKQTMILDMLNDRYY*
Ga0114972_1034517523300009187Freshwater LakeMPKNKNVLMNINGVDFQIDDKSYKHFKSLPKSQQEAIKQTMLLSMLNDRYY*
Ga0114972_1065868023300009187Freshwater LakeVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0133913_1113730533300010885Freshwater LakeMTENQNVLMDIGGVKIYVNDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY*
Ga0133913_1175621723300010885Freshwater LakeMAKNMNVLMDIGGVKIYVNDANYEHFKLLPKDQQEAVKQMMIFKMLQDKYD*
Ga0137575_1008048813300010970Pond Fresh WaterMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNNK*
Ga0157599_113513023300012715FreshwaterMPKNKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMLLSMLNDRYY*
Ga0164294_1033637113300013006FreshwaterMPKNKNVLMNIYGVDFHIDDNSYKHFKSLPKIQQEAIKQTMILGFLKDRYY*
Ga0170791_1561881733300013295FreshwaterKMPKNKNVLMNIYGVDFHIDDNSYKHFKSLPKNQQEAIKQTMILGMLNDRYY*
Ga0207193_103379213300020048Freshwater Lake SedimentMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0207193_115880213300020048Freshwater Lake SedimentMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY
Ga0211736_1058478613300020151FreshwaterMVEENMNNVLMNIGGVNIYVNDKNYAHFNSLPKSKQEAIKQMVTLKLLQEKYDK
Ga0194049_107444923300020157Anoxic Zone FreshwaterYIMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0211733_1112291613300020160FreshwaterMPKNNNVLMNVEGVDFYINDSLFKHFNSLPKSQQEAIKQTMILGMLNNK
Ga0211735_1101556823300020162FreshwaterMPKNKNVLMNIEGVDFYINDSLFKHFKSLPKLQQEAIKQTMIFRNAKQ
Ga0211735_1136692223300020162FreshwaterMNINGVDFHIDDKNYKHFKSLPKIQQEAVKQMMILGLLKNEYD
Ga0211729_1013661713300020172FreshwaterMNINGVDFHIDDKNYKHFKSLPKIQQAAVKQMMILGLLKNEYD
Ga0211729_1113186423300020172FreshwaterMPKNKNVLMNVNGVDFHIDDNNCKHFKSLPKMQQEAVKQMMMLGVLKNE
Ga0208591_100915123300020493FreshwaterMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0208087_100604813300020502FreshwaterMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0208363_100672013300020503FreshwaterRIYYIIYIIMVEENMNNVLMNIGGVNIYVNDKNYAHFNSLPKSKQEAIKQMVTLKLLQEKYDK
Ga0208088_102267813300020505FreshwaterMPKNKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0207936_100556223300020512FreshwaterMPKNKNVLMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0208481_100741713300020520FreshwaterMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNNK
Ga0208481_101235513300020520FreshwaterMNIGGVNIYVNDKNYAHFNSLPKSKQEAIKQMVTLKLLQEKYDK
Ga0208482_104030523300020521FreshwaterMPKNKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQSMLLSMLNDRYY
Ga0208601_104329613300020532FreshwaterMPKNKNVLMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0208857_106012023300020542FreshwaterMNIHGVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0208856_105128413300020548FreshwaterMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYH
Ga0208362_103161213300020558FreshwaterCHIDDNNYKHFKSLPKIQQEAIKQTMILGFLNDRYY
Ga0207934_102020913300020561FreshwaterYINNLKYIFSILYKMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0207934_103372423300020561FreshwaterMLYYIIMPENNNVLMQIGGVNIYVNDKNYKHFNSLPKSQQEAIKQTMILGMLNNK
Ga0208229_101290323300020569FreshwaterMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0208053_100421473300020575FreshwaterMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY
Ga0214201_102636313300020732FreshwaterVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0214162_100071043300021108FreshwaterMPKNNNVLMNVEGVDFYIHDSLFKHFNSLPKSQQEAIKQTMILGMLNNK
Ga0208496_102589813300025591FreshwaterMLHLYIYKMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKSQQEAIKQTMILDMLNDRYY
Ga0208496_104231333300025591FreshwaterMEEENKNVLMNIGGVKIYINDTSYEHFNLLPKSQQEAIKQTMILDMLNDRYY
Ga0208872_120089823300025838FreshwaterMPKNKNVLMNINRVDFHIDDNNYKHFKSLPKIQQEAVKQYMLLGLLKSVYD
Ga0209033_115305613300027697Freshwater LakeVDFHIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0209107_1030824723300027797Freshwater And SedimentMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0209358_1042409213300027804Freshwater LakeKQLKIISLVYYIKMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0209230_1073151613300027836Freshwater And SedimentMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRY
Ga0209668_1003134323300027899Freshwater Lake SedimentMPKNKNVLMNIHGVDFQIDDKNYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0247722_1025890013300028027Deep Subsurface SedimentMPKNKNVLMNINGVDFHIDDKNYKHFKSLPKIQQEAVKQMMILGLLKNEYD
Ga0315907_1059508013300031758FreshwaterMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEA
Ga0315907_1061588423300031758FreshwaterMNVEGVDFYINDSLLNHFKSLPKMQQEAVKQMMILGMLNNK
Ga0315899_1012080033300031784FreshwaterMTENQNVLMDIGGVKIYVNDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY
Ga0315899_1068880333300031784FreshwaterMNIHGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLNDRYY
Ga0315899_1073026813300031784FreshwaterMPENQNVLMDIGGVKIYVNDKNYEHFNSLPKSQQEAVKQLMILKMLQNEYDQ
Ga0315899_1076374023300031784FreshwaterMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQTMLLSMLNDRYY
Ga0315899_1178006523300031784FreshwaterMVEENMNNVLMNIGGVNIYVNDTNYAHFNSLPKSKQEAIKQMVTLKLLQEKYDK
Ga0315908_1102841223300031786FreshwaterMPKNKNVLMNVEGVDFYINDSLFKHFKSLPKMQQEAVKQMMILGMLNNK
Ga0315908_1114392013300031786FreshwaterMTENQNVLMDIGGVKIYVNDKNYEHFNSXSKSQQEAIKQTMLL
Ga0315908_1139673323300031786FreshwaterMPKNKNVLMNIEGVDFYINDSLFKHFKSLPKMQQEAVKQMMILGMLNNK
Ga0315908_1146653513300031786FreshwaterKMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0315905_1144387813300032092FreshwaterMSKNNNVLMNVEGVDFYINDSLFNHFKSLPKMQQEAVKQMMILGMLNNK
Ga0315902_1054178323300032093FreshwaterMNINGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLKDRYY
Ga0334989_0202845_110_2773300033984FreshwaterMLYYIIMPENNNVLMQIGGVNIYVNDKNYEHFNSLPKSQQEAIKQTMILGMLNNK
Ga0334989_0223544_391_5553300033984FreshwaterMVEENMNNVLMNIGGVNIYVNDTNYAHFNSLPKSKQEAIKQMMTLKLLQEKYDK
Ga0335023_0623022_90_2543300034050FreshwaterMVKENMENVLMNIGGVNIYVSDKNYTHFNSLPKSKQEAIKQMMTLKLLQEKYDN
Ga0334983_0484381_308_4573300034060FreshwaterMPKNNNVLMNIEGVDFYINDSLFKHFNSLPKSQQEAIKQTMILGMLNNK
Ga0334983_0583470_478_6123300034060FreshwaterMEEENKNVLMNIGGVKIYINDTNYEHFNLLPKSQQEAIKQTMILG
Ga0335019_0072145_2_1153300034066FreshwaterDFHIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0335030_0913245_224_3793300034103FreshwaterMPKNKNVLMNINGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGMLNDRYY
Ga0335037_0181270_1025_11533300034107FreshwaterMPKNKNVLMNINGVDFHIDDKNYKHFKSLPKIQQEAVKQMMIL
Ga0335063_0334946_167_3223300034111FreshwaterMPKNKNVLMNINGVDFHIDDNNYKHFKSLPKIQQEAIKQTMILGFLNDRYY
Ga0335068_0239815_814_9303300034116FreshwaterMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQ
Ga0335058_0665960_1_1503300034121FreshwaterMPKNKNVLMNIHGVDFQIDDKSYKHFKSLPKIQQEAIKQTMILGMLNDRY
Ga0335017_0056275_1124_12883300034167FreshwaterMVKENMQNVLMNIGGVNIYVSDKNYTHFNSLPKSKQEAIKQMMTLKLLQEKYDN
Ga0334997_0180594_1266_13943300034280FreshwaterDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSMLLSMLNDRYY
Ga0334997_0316369_3_1253300034280FreshwaterMPKNKNVLMDIGGVKIYINDKNYEHFNSLSKSQQEAIKQSM


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