NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080891

Metagenome / Metatranscriptome Family F080891

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080891
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 129 residues
Representative Sequence VKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGVWLGRANAAGVRYAWFRMVPR
Number of Associated Samples 73
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.57 %
% of genes near scaffold ends (potentially truncated) 35.09 %
% of genes from short scaffolds (< 2000 bps) 71.93 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.246 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(28.070 % of family members)
Environment Ontology (ENVO) Unclassified
(28.070 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.158 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.
1LCrCPGB2aDRAFT_0264672
2Ga0058689_101821501
3Ga0068912_105792581
4Ga0105679_101108874
5Ga0105679_104148901
6Ga0105679_109097403
7Ga0105679_110088652
8Ga0126307_1000068814
9Ga0126307_100054818
10Ga0126307_100523031
11Ga0126313_100044253
12Ga0126313_100610924
13Ga0126313_103751772
14Ga0126313_105934102
15Ga0126305_102184993
16Ga0126305_107020071
17Ga0126305_108096371
18Ga0126304_106938762
19Ga0126304_112778391
20Ga0126315_100033236
21Ga0126315_101386702
22Ga0126315_103621042
23Ga0126315_104217992
24Ga0126315_106209142
25Ga0126309_100555081
26Ga0126309_100667401
27Ga0126309_101028702
28Ga0126309_101266822
29Ga0126309_102137342
30Ga0126308_1000021715
31Ga0126308_108925282
32Ga0126312_100340931
33Ga0126314_100612702
34Ga0126314_107973972
35Ga0126314_115016331
36Ga0126310_104584751
37Ga0126306_101131312
38Ga0126306_109088521
39Ga0126306_111452841
40Ga0136627_11100831
41Ga0136623_100970131
42Ga0136625_10481491
43Ga0136625_11789081
44Ga0136621_11621962
45Ga0136624_10030187
46Ga0136610_10249272
47Ga0136618_101842692
48Ga0136640_102101401
49Ga0136615_100043715
50Ga0136613_100777393
51Ga0136614_102876322
52Ga0136614_103185621
53Ga0182000_100469221
54Ga0182001_102824181
55Ga0182001_103021472
56Ga0183260_100915981
57Ga0183260_101435962
58Ga0190265_114910951
59Ga0190269_102230952
60Ga0190269_103005911
61Ga0190268_101206622
62Ga0190268_103481212
63Ga0190268_104081941
64Ga0193612_10038072
65Ga0193608_10078382
66Ga0193608_10359653
67Ga0193610_10070673
68Ga0193598_11343161
69Ga0193598_11459692
70Ga0193594_11410111
71Ga0193594_11415321
72Ga0193591_10277282
73Ga0193611_10065821
74Ga0193616_10489812
75Ga0193616_10559142
76Ga0190273_100260601
77Ga0193601_10531661
78Ga0193614_10398522
79Ga0193614_10979062
80Ga0193593_10035824
81Ga0193593_10266451
82Ga0193599_11910971
83Ga0193605_10547062
84Ga0193604_10180381
85Ga0193602_10681181
86Ga0190264_100248602
87Ga0190264_103233582
88Ga0190264_114822921
89Ga0190264_118698901
90Ga0196958_102925711
91Ga0196962_100047572
92Ga0209642_101312282
93Ga0209461_100904042
94Ga0209796_100672362
95Ga0268240_100006945
96Ga0268259_101836951
97Ga0268242_10922051
98Ga0272423_100049643
99Ga0272431_101554791
100Ga0334924_025623_182_643
101Ga0334919_014498_829_1173
102Ga0334936_005468_1986_2447
103Ga0334915_000408_5945_6406
104Ga0334929_077354_76_537
105Ga0334925_116247_3_401
106Ga0334932_101604_2_505
107Ga0334937_087447_1_453
108Ga0334923_138721_2_376
109Ga0334931_003651_2433_2777
110Ga0334917_035954_391_852
111Ga0334912_020366_1_426
112Ga0334945_024351_16_477
113Ga0334935_004010_440_901
114Ga0334935_049991_151_597
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.15%    β-sheet: 33.10%    Coil/Unstructured: 57.75%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110VKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGVWLGRANAAGVRYAWFRMVPRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
98.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Polar Desert Sand
Soil
Soil
Serpentine Soil
Sub-Biocrust Soil
Soil
Biocrust
Hypolithic Biocrust
Soil
Soil
Rock
Agave
Agave
13.2%9.6%4.4%28.1%3.5%3.5%6.1%20.2%5.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LCrCPGB2aDRAFT_02646723300000095SoilMRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG*
Ga0058689_1018215013300004016AgaveVKEYKDRWEDAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR*
Ga0068912_1057925813300005506SoilWERARNPGQVSPSAVQNLDGDWRVERLSGPVPMPFVWKRIREGRGTTRVSPSGPSSLGPGLPFRLEQREGHVALIYLGPLAFLVDELRMEADGSWLGRANVAGIRYAWFKLIPA*
Ga0105679_1011088743300007790SoilMRHKPHSDPRAYEERWERAGTRGVEGRELLSVVGNLDGDWKVERLAGPVPMPFVWKRIRDGRGTTRVSPPLRRRMVLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEDDGSWLGRANAAGIRYAWFRMVPMNGNTNPASEIRDLG*
Ga0105679_1041489013300007790SoilVSSIRHKPHSDPRAYEERWKRAGTRDAERRERLSIVGNLDGDWKVERLTGPVPMPFVWKRIQAGRGTTRISPPLRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRQEADGSWLGRANAAGIRYAWFRMVLLGRNHSPTGGIRDPR*
Ga0105679_1090974033300007790SoilVRFTKHEPPSDSKFYEERWERAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFGSITNPASRIRNLR*
Ga0105679_1100886523300007790SoilVRNLDGDWKVERLTGPVPMPFVWKRIRAGRGTTRVSPPFRGRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDDLRQEADGSWLGRANAAGIRYAWFRMVPLASNTNPASGIRDLG*
Ga0126307_10000688143300009789Serpentine SoilVEEYEERWERAGARDVEQELQLSVVGNLEGDWRVERLSAPVPMPFVWKRIRSGRGTTRALPFGPKLSFRLEQREGHVALIYLGPLSFLLDELRLEANGTWLGRANAVGVRYAWFRMTPM*
Ga0126307_1000548183300009789Serpentine SoilLGNLEGDWKVRRLSGPLPMPFVWKRIRDGRRATNLLPSWRSGRLPLEPKLPFELKQHEGHVALIYRPPLSFLVDELRLEEDGCWLGRAYIASLPYAWFRMIPIRAREGPL*
Ga0126307_1005230313300009789Serpentine SoilVNGYEDRWERAGRQGPPSVVENLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMVPR*
Ga0126313_1000442533300009840Serpentine SoilMSSTKRETRGGVEEYEERWERAGARDAEQEPQLSVVGNLEGDWRVERLSAPVPMPFVWKRIRSGRGTTRALPFGPKLSFRLEQREGHVALIYLGPLSFLLDELRLEANGTWLGRANAVGVRYAWFRMTPM*
Ga0126313_1006109243300009840Serpentine SoilLGNLEGDWKVRRLSGPLPMPFVWKRIRDGRGATHVLPSWRSGRLPLEPKLPFELKQHEGHVALIYRPPLSFLVDELRLEEDGCWLGRAYIASLPYAWFRMIPIRAREGPL*
Ga0126313_1037517723300009840Serpentine SoilVRSTHSHCSRRNGVKEYKDRWEHAGRLEKPSVVKNLEGDWKVERLSGPLPMAFMWKRIWDGRGTTQVSSFGLKFPFRLEQRKGYVALIYLRPLSFLVDELRLEADGAWLGRANAAGVRYAWFRMFPR*
Ga0126313_1059341023300009840Serpentine SoilVKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR*
Ga0126305_1021849933300010036Serpentine SoilAASAGAAPSTRSRFSRGDDVNGYEDRWEHTGRQEPPSVVENLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMVPR*
Ga0126305_1070200713300010036Serpentine SoilGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR*
Ga0126305_1080963713300010036Serpentine SoilRLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGVWLGRANAAGVRYAWFRMVPR*
Ga0126304_1069387623300010037Serpentine SoilVKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGVWLGRANAAGVRYAWFRMVPR*
Ga0126304_1127783913300010037Serpentine SoilYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFRMFPR*
Ga0126315_1000332363300010038Serpentine SoilVEEYEERWERAGARDVEQELQLSVVGNLEGDWRVERLSAPVPMPFVWKRIRSGRGTTRALPFGPKLSFRLEQREGHVALIYLGPLSFLLDELRLEANGTWLGRANAAGVRYAWFRMTPM*
Ga0126315_1013867023300010038Serpentine SoilLGNLEGDWKVRRLSGPLPMPFVWKRIRDGRGATHVLPSWRSGGLPLEPKLPFELKQHEGHVALIYRPPLSFLVDELRLEEDGCWLGRAYIASLPYAWFRMIPIRAREGPL*
Ga0126315_1036210423300010038Serpentine SoilVKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADAAWLGRANAAGVRYAWFQMFPR*
Ga0126315_1042179923300010038Serpentine SoilRWERAGTRDVTRREPLSVLRNLEGDWKVERLSGPVPMPFVWKKVRGGRGETRALPSWRTGGLPLEPKLPFELYQHEGHVTLVYRPPLSFLVDELRFEEDGSWLGRANAAGFCYAWFRMVPIGSP*
Ga0126315_1062091423300010038Serpentine SoilLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFMVDELRLEADGVWLGRANAAGVRYAWFRMVPR*
Ga0126309_1005550813300010039Serpentine SoilVKEYKNRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR*
Ga0126309_1006674013300010039Serpentine SoilVSSTKHEPRSCLREYEERWERAGVRGEEAQKSLSVVGNLDGDWRVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPVESTVNPTSEIRL*
Ga0126309_1010287023300010039Serpentine SoilVNGYEDWWEHAGRQEPPSVVENLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMVPR*
Ga0126309_1012668223300010039Serpentine SoilMSSTKRGTRGGVEEYEERWERAGARDAEQEPQLSVMGNLEGDWRVERLSGPVPMPFVWKRIRSGRGTTRALPFGPKLSFRLEQREGHVALIYLGPLSFLLDELRLEANGTWLGQANAAGVRYAWFRMTPV*
Ga0126309_1021373423300010039Serpentine SoilMNVYEDRWERAGRQEPSSVVDNLEGDFRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRLVPR*
Ga0126308_10000217153300010040Serpentine SoilVEEYEERWERAGARDVEQELRLSVVGNLEGDWRVERLSAPVPMPFVWKRIRSGRGTTRALPFGPKLSFRLEQREGHVALIYLGPLSFLLDELRLEANGTWLGRANAVGVRYAWFRMTPM*
Ga0126308_1089252823300010040Serpentine SoilLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGVWLGRANAAGVRYAWFRMVPR*
Ga0126312_1003409313300010041Serpentine SoilLGNLEGDWKVRRLSGPLPMPFVWKRIRDGRGATHVLPSWRSGRLPLEPKLPFELKQHEGHVALIYRPPLSFLVDELRLEEDGCWLGRAYIASLPYAWFRMIP
Ga0126314_1006127023300010042Serpentine SoilLGNLEGDWKVRRLSGPLPMPFVWKRIRDGRGATHVLPSWRTGGLPLEPKLTFELKQHEGHVALIYRPPLSFLVDELRLEEDGCWLGRAYIASLPYAWFRMIPIRAREGPL*
Ga0126314_1079739723300010042Serpentine SoilVKEYKDRWEHAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFMVDELRLEADGVWLGRANAAGVRYAWFRMVPR*
Ga0126314_1150163313300010042Serpentine SoilSTHSHCSRRNGVKEYKDRWEHAGRLEKPSVVKNLEGDWKVERLSGPLPMAFMWKRIWDGRGTTQVSSFGLKFPFRLEQRKGYVALIYLRPLSFLVDELRLEADGAWLGRANAAGVRYAWFRMFPR*
Ga0126310_1045847513300010044Serpentine SoilLRHLEGDWKVERLSGPVPMPFVWKKIRGGRGETRALPSWRTGGLPLEPKLPFELYQREGHVALLYRPPLSFLVDELRFEEDGSWLGRANAAGFCYAWFRMVPIGSP*
Ga0126306_1011313123300010166Serpentine SoilVNGYEDRWERAGRQEPPSVVENLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGSRFSFRLEQRERYVALIYLGPLSLLVDELRLEADGSWLGRANAAGVRYAWFRMVPR*
Ga0126306_1090885213300010166Serpentine SoilLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR*
Ga0126306_1114528413300010166Serpentine SoilVEEYEERWERAGARDVEQELQLSVVGNLEGDWRVERLSAPVPMPFVWKRIRSGRGTTRALPFGPKLSFRLEQREGHVALIYLGLLSFLVDELRLKEDGSWLGRANAAGI
Ga0136627_111008313300012042Polar Desert SandVKNRLRGNSKDYEERWERAGALDAARGRLPSVVANLQGDWNVERLSGPLPMPFVWKRVRNGRGETYVLPAPPRLRGLPLGPRFPFRLEQREGHVALIYVGPLSFLVDELRLEADGSWLGRATAAGIRYAWF
Ga0136623_1009701313300012045Polar Desert SandVSSTKYKPHSGLREYEERWERAGARDAEAQKSLSVVGNLDGDWRVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRSVLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFR
Ga0136625_104814913300012091Polar Desert SandHSGLREYEERWERAGARDAEAQKSLSIVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRSVLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPAESTINPASGIRNPG*
Ga0136625_117890813300012091Polar Desert SandDYKERWERARNAGQEPLSIVPNVEGDWRVERLSGPVPMSFVWKQVRGSRGTTRVSPRGGSLGPGLPFRLEQREGHVALIYAGPLSFLVDELRRETDGSWLGRANAAGIRYAWFRLIPM*
Ga0136621_116219623300012092Polar Desert SandMKHKPHSGLREYEERWERAGARDAEAQKSLSVVGNLDGDWRVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRSVLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPAESTINPASGIRNPG*
Ga0136624_100301873300012183Polar Desert SandMKHKPHSGLREYEERWERAGARDAEAQKSLSIVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRSVLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPAESTINPASGIRNPG*
Ga0136610_102492723300012184Polar Desert SandMKYKPHSGLREYKERWERAGARDAEAQKSLSIVGNLDRDWRVERLSGPVPMPFVWKRIRAGRGTTRISPPLRRRSGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRIVPVESTVNPASEIRL*
Ga0136618_1018426923300012188Polar Desert SandPEQGSRNRIRDYKERWERARNAGQEPLSSVPNVEGDWRVERLSGPVPMSFVWKQVRGSRGTTRVSPRGGSFGPGLPFRLEQREGHVALIYAGPLSFLVDELRRETDGSWLGRANAAGIRYAWFRLIPM*
Ga0136640_1021014013300012531Polar Desert SandERWERARNAGQEPLSILRNVEGDWRVERLSGPVPMPFVWKQVRGSRGKTRFSPRGGSFGPGLPFRLEQREGHVALIYASPLSFLVDELRREADGSWLGQANAAGIRYAWFRLIPM*
Ga0136615_1000437153300012678Polar Desert SandMKYKPHSGLREYKERWERAGARDAEAQKSLSIVGNLDRDWRVERLSGPVPMPFVWKRIRAGRGTTRISPPLRRRSGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPVESTINPTSGIRL*
Ga0136613_1007773933300012681Polar Desert SandMKHKPHSGLREYEERWERAGARDAEAQKSLSIVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRSVLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPAESTINPASGIRNSG*
Ga0136614_1028763223300012684Polar Desert SandLPEHGSRNRIRDYKERWERARNAGQEPLSIVPNVEGDWRVERLSGPVPMSFVWKQVRGSRGTTRVSPRGGSLGPGLPFRLEQREGHVALIYAGPLSFLVDELRRETDGSWLGRANAAGIRYAWFRLIPM*
Ga0136614_1031856213300012684Polar Desert SandEKGTRVSSMKYKPHSGLREYEERWERAGARDAEAQKSLSIVGNLDRDWRVERLSGPVPMPFVWKRIQAGRGTTRVSPPLRRRSGLPLKPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVPVESTINPTSGIRL*
Ga0182000_1004692213300014487SoilVKEYEDRWERAGRSELSSVIKNLEGDWKLERLSGPLPMPFVWKRIRIGRGTTRVSSFGPRFPFRLEQREGHVALIYLGPLSFLVDELRLDADGSWLGRANAAGVRYAWFRMTPR*
Ga0182001_1028241813300014488SoilGNFRRREGARLDPGIRTQRSGSKEHEERWERAGVRDAERREPLSVLRNLEGAWKVERLSGPLPMPFVWKRVGGGRGETHVLPSWWSGGLPLEPKLPFGLEQREGHVDLIYCPPLSFLVDELRLEEDGTWLGRANVAGLQYAWFRMFPMRTP*
Ga0182001_1030214723300014488SoilVKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPREKLVAKVTCR*
Ga0183260_1009159813300017787Polar Desert SandLPEHGSRNRIRDYKERWERARNAGQEPLSILRNVEGDWRVERLSGPVPMPFVWKQVRGGRGKTRFSPRGGSFGPGLPFRLEQREGHVVLIYAGPLSFLVDELRREADGSW
Ga0183260_1014359623300017787Polar Desert SandVSLPEHGSRNGIRDYKERWKRARNAGQEPLSIVRNVEGDWRVERLSGPVPMLFVWKQVRGGRGTTRVSPRGGSFGPGLPFRLEQREGHVALIYTGPLSFLVDELRREADGSWLGRANAAGIRYAWFRLILM
Ga0190265_1149109513300018422SoilVTSNEREPLRGSRFYEERWERAGTLDAEGQKTLSIVGNLDGDWRVERLSGPVPMPLVWKRIRAERGTTRVSPPLRRRRCLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGVRYAWFRMVAVESTINPARGIRNPE
Ga0190269_1022309523300018465SoilMNVYEDRWERAGRQESPSVVDNLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMVPR
Ga0190269_1030059113300018465SoilVTFTEREPLRGSRFYEERWERAGTRDAEGQEALSVVGNLDGDWRVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVALVYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMVPVESTINPASGI
Ga0190268_1012066223300018466SoilVNGYEDRWEPAGRQGPPSVVENLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYPWFRMIPR
Ga0190268_1034812123300018466SoilVKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVR
Ga0190268_1040819413300018466SoilSKEREPLGGSRFYEERWERAGTLDAEGQNTLSIVGNLDGDWRVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPLRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMVPVESNINPASGIRKPG
Ga0193612_100380723300018757SoilVSLSEHGSQDNTRGYEGQWERARNPGQVSPSAVQNLDGDWRVERLSGPVPMPFVWKRIREGRGTTRVSPSGLSSLGPGLPFRLEQREGHVALIYLGPLAFLVDELRMEADGSWLGRANVAGIRYAWFKLIPA
Ga0193608_100783823300018875SoilVSLSEHGSQDNTRGYEGQWERARNPGQVSPSAVQNLDGDWRVERLSGPVPMPFVWKRIREGRGTTRVSPSGPSSLGPGLPFRLEQREGHVALIYLGPLAFLVDELRMEADGSWLGRANVAGIRYAWFKLIPA
Ga0193608_103596533300018875SoilTATSRAYGRRGPDRQVDRSQARPDERGEVRFTKHEPPSGFRFYEERWERTGMRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNL
Ga0193610_100706733300018891SoilVNGYEDRWERAGRQEPPSVVDNLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEANGSWLGRANAAGVRYAWFRMIPR
Ga0193598_113431613300018910SoilMRHTGRSVLKDYEERWERAGILDAAWGERLSLVANLQGDWNVERLSGPLPMPFVWKRIRNGRGETYVLPAPRARGVPLVPRFPFRLEQREGHVVLIYTGLLSFLVDELRFEAGGSWLGRANAAGIRYA
Ga0193598_114596923300018910SoilVSFTEHEPRSGSKFYEERWERAGKRDAEGLEPLSVVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVTLIYLGPLSFLVDELRLEEDGSWLGRAN
Ga0193594_114101113300018914SoilGSRNAEGQKSLSVMGNLDGDWKVKRLSGPVPMPFVWKRIRAGQGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAARIRYAWFRMVSVESNVNPAGGIRNVG
Ga0193594_114153213300018914SoilGRWERARNPGQVSPSAVQNLDGDWRVERLSGPVPMPFVWKRIREGRGTTRVSPSGPSSLGPGLPFRLEQREGHVALIYLGPLAFLVDELRMEADGSWLGRANVAGIRYAWFKLIPA
Ga0193591_102772823300018915SoilMRHTGRSVLKDYEERWERAGILDAAWGERLSLVANLQGDWNVERLSGPLPMPFVWKRIRNGRGETYVLPAPRARGVPLVPRFPFRLEQREGHVVLIYTGLLSFLVDELRFEAGGSWLGRANAAGSRYAWFAMTPIWTPERPG
Ga0193611_100658213300018917SoilVSLSEHGSQDNTRGYEGRWERARNPGQVSPSAVQNLDGDWRVERLSGPVPMPFVWKRIREGRGTTRVSPSGPSSLGPGLPFRLEQREGHVALIYLGPLAFLVDELRMEADGSWLGRANVAGIRYAWFKLIPA
Ga0193616_104898123300018918SoilMRHTGRSVLKDYEERWERAGILDAAWGERLSLVANLQGDWNVERLSGPLPMPFVWKRIRNGRGETYVLPAPRARGVPLVPRFPFRLEQREGHVVLIYTGLLSFLVDELRLEAGGSWLGRANAAGIRYAWFAMTPIWTPERPG
Ga0193616_105591423300018918SoilVSFTEHEPHSGSKFYEERWERAGKRDAEGLEPLSVVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVTLIYLGPLSFLVDELRLEEDGSWLGQANAAGIR
Ga0190273_1002606013300018920SoilVSFTGREPRSGSRFYEERWERAGTLDAEGQKTLSIVGNLDGDWRVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMVPVESNINPASGIRKPG
Ga0193601_105316613300018931SoilVSFTGYEPRSGSRFYEERWEQAGSRNAEGQKSLSVMGNLDGDWKVKRLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQRKGHVALIYLGPLSFLVDELRLEEDGSWLGQANAAGIRYAWFRMI
Ga0193614_103985223300018933SoilMRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG
Ga0193614_109790623300018933SoilVNGYEDRWERAGRQEPPSVVDNLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMIPR
Ga0193593_100358243300018939SoilMRHTGRSVLKDYEERWERAGILDAAWGERLSLVANLQGDWNVERLSGPLPMPFVWKRIRNGRGETYVLPAPRARGVPLVPRFPFRLEQREGHVVLIYTGLLSFLVDELRFEAGGSWLGRANAAGIRYAWFAMTPIWTPERPG
Ga0193593_102664513300018939SoilVSFTEHEPHSGSKLYEERWERAGKRDAEGLEPLSVVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVTLIYLGPLSFLVDELRLEEDGSWLGRANAARIRYAWFRMVSVESNVNPASGIRNVG
Ga0193599_119109713300018946SoilEGQWERAHNPGQVSPSAVQNLDGDWRVERLSGPVPMPFVWKRIREGRGTTRVSPSGPSSLGPGLPFRLEQREGHVALIYLGPLAFLVDELRMEADGSWLGRANVAGIRYAWFKLIPA
Ga0193605_105470623300018984SoilVSFTGYEPRSGSRFYEERWEQAGSRNAEGQKSLSVMGNLDGDWKVKRLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVTLIYLGPLSFLVDELRLEEDGSWLGRANAARMRYAWFRMVSVESNVNPAG
Ga0193604_101803813300019132SoilGATRSTRSRCSRGNDVNGYEDRWERAGRQEPPSVVDNLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEANGSWLGRANAAGVRYAWFRMIPR
Ga0193602_106811813300019135SoilEERWERAGKRDAEGLEPLSVVGNLDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVTLIYLGPLSFLVDELRLEEDGSWLGRANAARIRYAWFRMVSVESNVNPASGIRNVG
Ga0190264_1002486023300019377SoilVNGYEDRWERAGRQEPPSVVDNLEGDWRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMVPR
Ga0190264_1032335823300019377SoilVRFTKHEPPSGSRFYEERWERAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG
Ga0190264_1148229213300019377SoilARRKGAKVSFTEHEPRSDSKSYEERWERAGKRDAEGLEPLSVVGNLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRWRRGLPLEPKLPFRLEQREGHVTLIYLGPLSFLVDELRLEEDGSWLGRANAARIRYAWFRMVSVESNVNPAGGIRNVG
Ga0190264_1186989013300019377SoilVTSKEREPLRGSRFYEERWERAGTRDAEGQEALSVVGNMDGDWKVERLSGPVPMPFVWKRIRAGRGTTRVSPPLRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLADELRLEEDGSWLGRANAAGIRYAWFRMVPVESNINPASGIR
Ga0196958_1029257113300020181SoilVRFTKHDPPSGSRFYEERWERAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRA
Ga0196962_1000475723300024430SoilLDPGRRTLRSGSKEYEERWERAGGRDARRREPLSVLRNLEGAWKVERLSGPLPMPFVWKRVGGGRGETHVLPSWWSGGLPLEPKLPFGLEQREGHVDLIYCPPLSFLVDELRLEEDGTWLGRANVAGFQYAWFRMFPMRTP
Ga0209642_1013122823300025167SoilVKEYEDRWERAGRSELSSVVKNLEGDWKVERLSGPLPMPFVWKRIGSGRGTTRVSSFGPRFPFRLEQREGYVALIYLEPLSFLVDELRLEADGSWLGRANAAGTRYAWFRMTPR
Ga0209461_1009040423300027750AgaveEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR
Ga0209796_1006723623300027766AgaveVKEYKDRWKDAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDSRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR
Ga0268240_1000069453300030496SoilVKEYKDRWEDAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR
Ga0268259_1018369513300030499AgaveSRSHGAASTGVVRSTHSHCSRRNGVKEYKDRWEYAGRLEKCSIVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR
Ga0268242_109220513300030513SoilMNVYEDRWERAGRQEPPSVVDNLEGDFRVERLSGPLPMPFVWKKIRGGRGTTRVSSFGPRFPFRLEQRERYVALIYLGPLSFLVDELRLEADGSWLGRANAAGVRYAWFRMIPR
Ga0272423_1000496433300033168RockMQHAARSGLKDYEERWEQAGDLDVGGLSSIVANLQGDWNVERLSGPLPMPFVWKHVRNGRGDTYVLPPPPRLRRLPLWPKFPFRLEQREGHVVLIYAGPLSFLVDELRLEADGSWLGRANAAGIRYAWFGMTPIWTPERPVRPRQPL
Ga0272431_1015547913300033181RockMQHAARSGLKDYEERWEQAGDLDVGGLYSIVANLQGDWNVERLSGPLPMPFVWKHVRNGRGDTYVLPPPPRLRRLPLWPKFPFRLEQREGHVVLIYAGPLSFLVDELRLEADGSWLGQANAAGIRYAWFGMTPIWTPERPVRPRQPL
Ga0334924_025623_182_6433300033989Hypolithic BiocrustVRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG
Ga0334919_014498_829_11733300034001Hypolithic BiocrustVKEYKDRWEYAGRLEKPNVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTQVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR
Ga0334936_005468_1986_24473300034007BiocrustMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG
Ga0334915_000408_5945_64063300034132Hypolithic BiocrustVRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG
Ga0334929_077354_76_5373300034135Hypolithic BiocrustMRFTKHEPPSGTRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFGSITNPASRIRNLG
Ga0334925_116247_3_4013300034173Hypolithic BiocrustMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAW
Ga0334932_101604_2_5053300034174Sub-Biocrust SoilYGRRGPDRQVDRSQARPDERGKVRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPLPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPA
Ga0334937_087447_1_4533300034221BiocrustMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRN
Ga0334923_138721_2_3763300034376Hypolithic BiocrustMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLEPKLPFRLEQREGQVALIYLGPLSFLVDELRLEEDGSWLGRAY
Ga0334931_003651_2433_27773300034377Sub-Biocrust SoilVKEYKDRWEYAGRLEKPSVVKNLEGDWKVERLSGPLPMPFVWKRIRDGRGTTRVSSFGLKFPFRLEQREGHVALIYLGPLSFLVDELRLEADGAWLGRANAAGVRYAWFQMFPR
Ga0334917_035954_391_8523300034391Hypolithic BiocrustMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMVPLERNANPASGIRDFG
Ga0334912_020366_1_4263300034392Sub-Biocrust SoilMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGI
Ga0334945_024351_16_4773300034779Sub-Biocrust SoilMRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPCRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRAYAAGIRYAWFRMLPFLSITNPASRIRNLG
Ga0334935_004010_440_9013300034781BiocrustVRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRYLG
Ga0334935_049991_151_5973300034781BiocrustMRHTGRSLLKDYEERWERAGILDAAWGERPSLVANLQGDWNVERLSGPLPMPFVWKRIRNGRGETYILPAPRARGVPLVPRFPFRLEQREGHVVLIYTGLLSFLVDELRLEAGGSWLGRANAAGIRYAWFAMTPIWTPERPGQTPQPL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.