Metagenome Family F080752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080752
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	73 residues
Representative Sequence	KGRKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Number of Associated Samples	85
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.18 %
% of genes near scaffold ends (potentially truncated)	41.23 %
% of genes from short scaffolds (< 2000 bps)	68.42 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.193 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.474 % of family members)
Environment Ontology (ENVO)	Unclassified (53.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.27% β-sheet: 0.00% Coil/Unstructured: 39.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF03633	Glyco_hydro_65C	50.88
PF00871	Acetate_kinase	18.42
PF00583	Acetyltransf_1	4.39
PF01594	AI-2E_transport	0.88
PF03636	Glyco_hydro_65N	0.88
PF02974	Inh	0.88
PF01515	PTA_PTB	0.88
PF11339	DUF3141	0.88
PF09361	Phasin_2	0.88
PF00300	His_Phos_1	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	51.75
COG0282	Acetate kinase	Energy production and conversion [C]	18.42
COG3426	Butyrate kinase	Energy production and conversion [C]	18.42
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.88
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.19 %
Unclassified	root	N/A	22.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.19 %
Unclassified	root	N/A	22.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.19 %
Unclassified	root	N/A	22.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.54 %
Unclassified	root	N/A	22.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	67.54 %
Unclassified	root	N/A	22.81 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	37.72 %
Unclassified	root	N/A	22.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.79 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	10.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	27.19 %
Unclassified	root	N/A	22.81 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	10.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	27.19 %
Unclassified	root	N/A	22.81 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	10.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.53 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	27.19 %
Unclassified	root	N/A	22.81 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	10.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.53 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	27.19 %
Unclassified	root	N/A	22.81 %
Brevundimonas sp. Root1279	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	10.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.53 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10060726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	968	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1028133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300004633\|Ga0066395_10580972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300005332\|Ga0066388_101724766	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005332\|Ga0066388_101783116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300005332\|Ga0066388_103873597	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005332\|Ga0066388_103969985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	754	Open in IMG/M
3300005555\|Ga0066692_10146398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1447	Open in IMG/M
3300005713\|Ga0066905_100306645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1249	Open in IMG/M
3300005764\|Ga0066903_105245689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	685	Open in IMG/M
3300009792\|Ga0126374_11258714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	595	Open in IMG/M
3300010047\|Ga0126382_10223131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1359	Open in IMG/M
3300010047\|Ga0126382_11742783	Not Available	583	Open in IMG/M
3300010358\|Ga0126370_11060126	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300010358\|Ga0126370_11113011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300010359\|Ga0126376_13019747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	520	Open in IMG/M
3300010361\|Ga0126378_10846939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1022	Open in IMG/M
3300010366\|Ga0126379_10465234	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300010366\|Ga0126379_13590060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	520	Open in IMG/M
3300010376\|Ga0126381_102687038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	712	Open in IMG/M
3300010376\|Ga0126381_103942714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	578	Open in IMG/M
3300010398\|Ga0126383_13068446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	545	Open in IMG/M
3300010863\|Ga0124850_1009642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3062	Open in IMG/M
3300012201\|Ga0137365_10009108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7884	Open in IMG/M
3300012207\|Ga0137381_10078413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2770	Open in IMG/M
3300012350\|Ga0137372_10049824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3708	Open in IMG/M
3300012353\|Ga0137367_10708215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	701	Open in IMG/M
3300012359\|Ga0137385_10464012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300012362\|Ga0137361_10075416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2870	Open in IMG/M
3300012948\|Ga0126375_11116190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300012971\|Ga0126369_10713640	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300016270\|Ga0182036_10084827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2109	Open in IMG/M
3300016270\|Ga0182036_10894416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	728	Open in IMG/M
3300016294\|Ga0182041_11383175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	646	Open in IMG/M
3300016319\|Ga0182033_11333004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300016387\|Ga0182040_10126883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1781	Open in IMG/M
3300016422\|Ga0182039_10945471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	771	Open in IMG/M
3300018468\|Ga0066662_11767645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	647	Open in IMG/M
3300021560\|Ga0126371_10913765	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300021560\|Ga0126371_11159227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	911	Open in IMG/M
3300027646\|Ga0209466_1081644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	653	Open in IMG/M
3300027654\|Ga0209799_1004656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2822	Open in IMG/M
3300027654\|Ga0209799_1164676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	504	Open in IMG/M
3300027874\|Ga0209465_10070348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1695	Open in IMG/M
3300027874\|Ga0209465_10117930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1307	Open in IMG/M
3300027874\|Ga0209465_10166583	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031543\|Ga0318516_10000201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16147	Open in IMG/M
3300031544\|Ga0318534_10527525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	674	Open in IMG/M
3300031561\|Ga0318528_10291743	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300031564\|Ga0318573_10474694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	673	Open in IMG/M
3300031680\|Ga0318574_10322225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300031680\|Ga0318574_10912631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	514	Open in IMG/M
3300031680\|Ga0318574_10957711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300031681\|Ga0318572_10882596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	531	Open in IMG/M
3300031713\|Ga0318496_10008674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4713	Open in IMG/M
3300031713\|Ga0318496_10093456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1607	Open in IMG/M
3300031719\|Ga0306917_10188966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1553	Open in IMG/M
3300031723\|Ga0318493_10332809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	823	Open in IMG/M
3300031724\|Ga0318500_10291278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	798	Open in IMG/M
3300031744\|Ga0306918_11313379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	556	Open in IMG/M
3300031751\|Ga0318494_10693134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	596	Open in IMG/M
3300031764\|Ga0318535_10394657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	617	Open in IMG/M
3300031768\|Ga0318509_10574237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031769\|Ga0318526_10248758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300031771\|Ga0318546_10907037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300031771\|Ga0318546_11204985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	532	Open in IMG/M
3300031778\|Ga0318498_10287933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	738	Open in IMG/M
3300031780\|Ga0318508_1043248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1174	Open in IMG/M
3300031781\|Ga0318547_10032036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2713	Open in IMG/M
3300031781\|Ga0318547_10072642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1909	Open in IMG/M
3300031819\|Ga0318568_10664156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300031821\|Ga0318567_10685711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	581	Open in IMG/M
3300031821\|Ga0318567_10791011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	537	Open in IMG/M
3300031832\|Ga0318499_10279420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300031833\|Ga0310917_10126410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1669	Open in IMG/M
3300031897\|Ga0318520_10550828	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031910\|Ga0306923_10383238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1601	Open in IMG/M
3300031910\|Ga0306923_10654236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1174	Open in IMG/M
3300031910\|Ga0306923_11333971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759	Open in IMG/M
3300031910\|Ga0306923_11429165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	727	Open in IMG/M
3300031912\|Ga0306921_10371080	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300031946\|Ga0310910_10979187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	661	Open in IMG/M
3300032054\|Ga0318570_10401124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	626	Open in IMG/M
3300032059\|Ga0318533_10011558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5347	Open in IMG/M
3300032059\|Ga0318533_10985448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300032064\|Ga0318510_10134916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	964	Open in IMG/M
3300032076\|Ga0306924_11105866	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300032094\|Ga0318540_10463066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	612	Open in IMG/M
3300033289\|Ga0310914_10237495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	1635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.12%
Plants	Host-Associated → Plants	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.21%
Loam	Environmental → Terrestrial → Soil → Loam	14.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100607263	3300000597	Forest Soil	MGRKVKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEADPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR*
AP72_2010_repI_A1DRAFT_10281331	3300000650	Forest Soil	MGPKGKGRKSKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDELFRKLRARIDTFEAQCRQKAGAR*
Ga0066395_105809721	3300004633	Tropical Forest Soil	KGQGRKGKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR*
Ga0066388_1017247661	3300005332	Tropical Forest Soil	MGPKRKGRKSKGRKGQGRKRKSQWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDELFRKLRARIDT
Ga0066388_1017831162	3300005332	Tropical Forest Soil	MGRKVKGRKSKGRKGQGRKRESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDHLFRKLRARIDTFEAQCWQKAGAR*
Ga0066388_1038735971	3300005332	Tropical Forest Soil	MGRKGKGRESKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFE
Ga0066388_1039699852	3300005332	Tropical Forest Soil	MGREGKGRKSKGRKRQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPGPAKPSLDDLFRKLRARIDTFEAQCWQNAGAR*
Ga0070703_101696241	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MGRKPKEWQREPGWWSENFFAIRDLIWAIYFKVEEPDKAAGPSLDTLFRRLRARIDTFEAKCRRKTA
Ga0066689_107678811	3300005447	Soil	KRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR
Ga0066692_101463982	3300005555	Soil	MGPKGKGRKGKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR*
Ga0066905_1003066452	3300005713	Tropical Forest Soil	MGPKSKGRKRKGGKGQGRKGQGRKGKSEWWSENFFAIRDLIWAIYFRVEEPDPAQPSLDDLFRKLRARINTFEAQCRQKAGAR*
Ga0066903_1052456892	3300005764	Tropical Forest Soil	MGPKSKGRKRKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAMPSLDDLFRKLRVRINTF*
Ga0066903_1056114612	3300005764	Tropical Forest Soil	KSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR*
Ga0126374_109929002	3300009792	Tropical Forest Soil	KRKSEWWSENFFAIRDLIWAIYFRVEEADPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0126374_112587142	3300009792	Tropical Forest Soil	MGPKRKGRKSKGRKGQGRKRKSQWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDELFRKLRARIDTFEAQCRQKAGAR*
Ga0126380_103081051	3300010043	Tropical Forest Soil	KGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDMFEAQCWQKAEAR*
Ga0126382_102231312	3300010047	Tropical Forest Soil	MGPKSKGRKSKGGKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKRRARINTFEAQCRQKAGAR*
Ga0126382_117427831	3300010047	Tropical Forest Soil	MGPKSKGRKRKGGKGQGRKGQGRKGKSEWWSENFFAIRDLIWAIYFRVEEPDPAQPSLDDLFRKLRARINTF
Ga0126370_102591851	3300010358	Tropical Forest Soil	GRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDELFRKLRARIDTFEAQCRQKAGAR*
Ga0126370_110601261	3300010358	Tropical Forest Soil	MGPKSKGRKSKGPKGQGRKGKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR*
Ga0126370_111130111	3300010358	Tropical Forest Soil	NAVSNAELTTGGGHMGRKGKGQKSKERKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDHLFRKLRARIDTFEAQCWQKAGAR*
Ga0126376_130197471	3300010359	Tropical Forest Soil	AIVAGSAVHLQSNAVSHADLTIGGRHMGPKRKARKSKGRKRKSEWWSENFFAIRDLIWAIYFRVEESDPAKPSLDELFRKLRARIDTFEARCRQKAGAR*
Ga0126378_108469392	3300010361	Tropical Forest Soil	AVSNAELTTGGRHMGRKVKGRKSKGRKGQGRKRESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDHLFRKLRARIDTFEAQCWQKAGAR*
Ga0126378_112179341	3300010361	Tropical Forest Soil	KSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR*
Ga0126379_104652343	3300010366	Tropical Forest Soil	MGRKGKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEESDPAKPSLDELFRKLRARIDTFEARCRQKAGAR*
Ga0126379_135900601	3300010366	Tropical Forest Soil	NAVSNAELTTGGRHMGRKVKGRKSKGRKGQGRKRKSEWWSGNFFAIRDLIWAIYFRVEEADPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR*
Ga0126381_1026870381	3300010376	Tropical Forest Soil	MGPKSKGRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRQLRARIDTFEAQCRQEAGAR*
Ga0126381_1039427142	3300010376	Tropical Forest Soil	MGRKGKGQKSKGRKSKGRKGQGQSESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFHKLRARIDTFEAQCWQKAGAR*
Ga0126383_130684461	3300010398	Tropical Forest Soil	TACVGAGGVNTGSTVHLQSNAVSNAELTTGGRHMGRKVKGRKSKGRKGQGRKRKSEWWSGNFFAIRDLIWAIYFRVEEADPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR*
Ga0124850_10096423	3300010863	Tropical Forest Soil	MGRKGKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR*
Ga0137365_100091085	3300012201	Vadose Zone Soil	MGPKGKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR*
Ga0137381_100784132	3300012207	Vadose Zone Soil	VGPETGGRHIGPKGKERKGKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR*
Ga0137379_100600181	3300012209	Vadose Zone Soil	KSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR*
Ga0137372_100498243	3300012350	Vadose Zone Soil	MGPKGKGRKGKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR*
Ga0137367_107082152	3300012353	Vadose Zone Soil	MGLKGKGRKGKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRRKAGAR*
Ga0137385_104640123	3300012359	Vadose Zone Soil	MGPKGKGRKGKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCR
Ga0137361_100754162	3300012362	Vadose Zone Soil	MGPKRKARKSKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLGDLFRKLRARIDTFEAQCRQKAGPR*
Ga0126375_111161902	3300012948	Tropical Forest Soil	GKGQGRKGQGRKGKSEWWSENFFAIRDLIWAIYFRVEEPDPAQPSLDDLFRKLRARINTFEAQCRQKAGAR*
Ga0126369_107136402	3300012971	Tropical Forest Soil	MGPKSKGRKSKGPKGQGRKGKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINT
Ga0182036_100848271	3300016270	Soil	RTGGGHVVGKSNGPRSKRRKGKGGKRKTEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRKKTGAR
Ga0182036_108944161	3300016270	Soil	MGRKGKERRSKGRKGQGRTGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0182041_113831751	3300016294	Soil	MGPKSKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAC
Ga0182033_113330041	3300016319	Soil	KSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEADPAKPSLDDLFRRLRARIDTFEAQCRQKAGAR
Ga0182040_101268831	3300016387	Soil	SNAVSNAKLMTGGRHMGPKGKGPNSKRRKGKGGKRKSERWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRKKTGAR
Ga0182037_120105141	3300016404	Soil	KRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0182039_109454711	3300016422	Soil	KRGKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPNPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0182038_109852181	3300016445	Soil	KRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0163161_120997211	3300017792	Switchgrass Rhizosphere	MGRKSKEWQREPGWWSENFFAIRDLIWAIYFKVEEPDKAAGPSLDTLFRRLRARTDTFEAQCRRKTAGR
Ga0066662_117676452	3300018468	Grasslands Soil	MGPKGKGRKRKSEWGSENFFAIRDLIWAIYFRVEEPDPAKPSLGDLFRKLRARIDTFEAQCRQKAGPR
Ga0193699_103670922	3300021363	Soil	MGRKSKEWQREPGWWSENFFAIRDLIWAIYFKVEEPDNAAGPSLDTLFRRLRVRIETFEAKCRRKTPG
Ga0126371_109137652	3300021560	Tropical Forest Soil	MGPKSKGRKRKGGKGQGRKGKSEWWSENFFAIRDLIWAIYFRVEEPDPAQPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0126371_111592271	3300021560	Tropical Forest Soil	GRKGQGQSESEWWSENFFAIRDLIWAIYFRVEESDPAKPSLDELFRKLRARIDTFEAQCRQKAGAR
Ga0207653_101346242	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MGRKPKEWQREPGWWSENFFAIRDLIWAIYFKVEEPDKAAGPSLDTLFRRLRARIDTFEAKCRRKTAG
Ga0209239_11905631	3300026310	Grasslands Soil	KGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLGDLFRKLRARIDTFEAQCRQKAGPR
Ga0209466_10816442	3300027646	Tropical Forest Soil	MGPKGKGRKSKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAQPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0209799_10046562	3300027654	Tropical Forest Soil	MGPKGKGRKSKGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDELFRKLRARIDTFEAQCRQKAGAR
Ga0209799_11646762	3300027654	Tropical Forest Soil	KGQGRKGKSEWWSENFFAIRDLIWAIYFRVEEPDPAQPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0209465_100703482	3300027874	Tropical Forest Soil	MGPKSKGRKSKGPKGQGRKGKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0209465_101179301	3300027874	Tropical Forest Soil	KSKGRKGQGRKRESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDHLFRKLRARIDTFEAQCWQKAGAR
Ga0209465_101665831	3300027874	Tropical Forest Soil	MGRKVKGRKSKGRKGQGRKRKSEWWSGNFFAIRDLIWAIYFRVEEADPAKPSLDDLFRKLRARIDTFEAQCRQK
Ga0318516_100002012	3300031543	Soil	MGPKSKGRKTKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318534_105275252	3300031544	Soil	MGPKGKGPKSKRRKGKGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRKKTGAR
Ga0318534_107085752	3300031544	Soil	KSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318528_102917432	3300031561	Soil	MGPKSKGRKSKGRKGQGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAG
Ga0318573_104746941	3300031564	Soil	MGRKGKERRSKGRKGQGRTGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPGKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318542_102618551	3300031668	Soil	KRKSEWWSENFFAIRDLIWAIYFRVEEPDPGKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318574_103222251	3300031680	Soil	LMTGGRHMGPKGKGPKSKRRKGKGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRKKTGAR
Ga0318574_109126311	3300031680	Soil	AGSALHLQSNAVSNAELTSGGRYMGPKSKGRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318574_109577111	3300031680	Soil	GQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPGKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318572_108825961	3300031681	Soil	MGRKGKERRSKGRKGQGRTGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPGKPSLDDLFRKLRARI
Ga0318496_100086742	3300031713	Soil	MGPKSKGRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318496_100934562	3300031713	Soil	RKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0306917_101889662	3300031719	Soil	KGRKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0318493_103328092	3300031723	Soil	MGRKGKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0318500_102912782	3300031724	Soil	MGRKGKGRKGEGRKRKSEWWNENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0306918_113133792	3300031744	Soil	MGRKVKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEADPAKPSLDDLFRRLRARIDTFEAQCRQKAGAR
Ga0318492_100435981	3300031748	Soil	RESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFHKLRARIDTFEAQCWQKAGAR
Ga0318494_106931342	3300031751	Soil	RYMGPKSKGRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318535_103946571	3300031764	Soil	CSIGAGSALHLQSNAVSNAELTSGGRYMGPKSKGRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318509_105742371	3300031768	Soil	KGRKGEGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0318526_102487581	3300031769	Soil	KGRKSKRRKDQGRKRESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0318546_109070372	3300031771	Soil	KSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318546_112049851	3300031771	Soil	GQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR
Ga0318498_102879332	3300031778	Soil	MGPKSKGRKSKGRKGQGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318508_10432482	3300031780	Soil	MAPKRKGRKSKRGKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPNPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318508_11686502	3300031780	Soil	GRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR
Ga0318547_100320363	3300031781	Soil	MGRKGKGQKSKGRKSKGRQGQGRKRESEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFHKLRARIDTFEAQCWQKAGAR
Ga0318547_100726421	3300031781	Soil	DAESAVHLQSNAVSNAKLMTGGRHMGPKGKGPKSKRRKGKGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRKKTGAR
Ga0318548_101018361	3300031793	Soil	RKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0318550_102149991	3300031797	Soil	RKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0318568_106641561	3300031819	Soil	SKGRKSKGRKGEGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0318567_106857112	3300031821	Soil	RKGEGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0318567_107910111	3300031821	Soil	PKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318499_102794202	3300031832	Soil	GRKSKREKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0310917_101264102	3300031833	Soil	MGRKGKGRKGEGRKRKSEWWNENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCWQRRGHADGA
Ga0318517_104075232	3300031835	Soil	GGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRKKTGAR
Ga0318520_105508281	3300031897	Soil	MGRKGKGRKGEGRKRKSEWWNENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTF
Ga0306923_103832382	3300031910	Soil	RKGQGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0306923_106542361	3300031910	Soil	KGRKSKRGKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0306923_113339712	3300031910	Soil	MGPKSKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAR
Ga0306923_114291651	3300031910	Soil	MGRKVKGRKSEGRNSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFGVEEPDPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0306921_103710802	3300031912	Soil	MGPKSKGRKSKGRKGQGGKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQ
Ga0310910_109791872	3300031946	Soil	MGRKGKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0318531_104060042	3300031981	Soil	SEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRVRIDTFEAQCGQKAEAR
Ga0318570_104011241	3300032054	Soil	GRKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR
Ga0318533_100115584	3300032059	Soil	MGPKSKGRKTKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPDPAKPSLDDLFRKLRARINTFEAQCQQKAGAR
Ga0318533_109854482	3300032059	Soil	PRGVCQRKSKGRKSRGRKGKSEWWSENFFAIRDLIWAIYFRVEEPGPAKLSLDDLFRKLRARIDTFEAQCRQKAGAC
Ga0318505_104769742	3300032060	Soil	RKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR
Ga0318510_101349161	3300032064	Soil	SKGRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0306924_111058662	3300032076	Soil	MGRKGKGRKSKGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR
Ga0318540_104630662	3300032094	Soil	GRKSKGPKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFWIEEPDPAKPSLDDLFRKLRARIDTFEAQCRQKAGAS
Ga0307470_107385432	3300032174	Hardwood Forest Soil	MGRKPKEWQREPGWWSENFFAIRDLIWAIYFKVEEPDKAAGPSLDTLFRRLRARTDTFEAQCRRKTAG
Ga0310914_102374951	3300033289	Soil	SKRGKGQGRKGQGRKRKSEWWSENFFAIRDLIWAIYFRIEEPNPAKPSLDDLFRKLRARINTFEAQCRQKAGAR
Ga0310914_115761001	3300033289	Soil	QGRKRKSEWWSENFFAIRDLIWAIYFRVEEPDPAKPSLDDLFRKLRARIDTFEAQCRQEAGAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences