NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080638

Metagenome / Metatranscriptome Family F080638

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080638
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 61 residues
Representative Sequence MDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCGHCGELTTFALQDRAGWYACLACGRYA
Number of Associated Samples 106
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.96 %
% of genes near scaffold ends (potentially truncated) 15.65 %
% of genes from short scaffolds (< 2000 bps) 75.65 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (53.913 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.304 % of family members)
Environment Ontology (ENVO) Unclassified
(40.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.609 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.16%    β-sheet: 0.00%    Coil/Unstructured: 54.84%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF13466STAS_2 35.65
PF03706LPG_synthase_TM 13.04
PF01740STAS 3.48
PF03992ABM 3.48
PF07681DoxX 3.48
PF07077DUF1345 2.61
PF07883Cupin_2 0.87
PF02566OsmC 0.87
PF13248zf-ribbon_3 0.87
PF02274ADI 0.87
PF02056Glyco_hydro_4 0.87
PF00005ABC_tran 0.87
PF12760Zn_Tnp_IS1595 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 13.04
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 3.48
COG4270Uncharacterized membrane proteinFunction unknown [S] 3.48
COG4291Uncharacterized membrane proteinFunction unknown [S] 2.61
COG1486Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolaseCarbohydrate transport and metabolism [G] 0.87
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.87
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.87
COG1834N-Dimethylarginine dimethylaminohydrolaseAmino acid transport and metabolism [E] 0.87
COG2235Arginine deiminaseAmino acid transport and metabolism [E] 0.87
COG4874Uncharacterized conserved proteinFunction unknown [S] 0.87


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.91 %
UnclassifiedrootN/A46.09 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig506345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2426Open in IMG/M
2199352025|deepsgr__Contig_165699Not Available656Open in IMG/M
2228664021|ICCgaii200_c1050717Not Available850Open in IMG/M
3300000858|JGI10213J12805_10361958Not Available748Open in IMG/M
3300000890|JGI11643J12802_11527523Not Available901Open in IMG/M
3300000956|JGI10216J12902_103718610Not Available595Open in IMG/M
3300001431|F14TB_101270211Not Available612Open in IMG/M
3300004114|Ga0062593_102570489Not Available578Open in IMG/M
3300004157|Ga0062590_101353616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae705Open in IMG/M
3300004157|Ga0062590_101407645Not Available694Open in IMG/M
3300005105|Ga0066812_1014474Not Available597Open in IMG/M
3300005168|Ga0066809_10000483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5257Open in IMG/M
3300005169|Ga0066810_10000027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8301Open in IMG/M
3300005294|Ga0065705_10164467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1751Open in IMG/M
3300005329|Ga0070683_100565441Not Available1087Open in IMG/M
3300005331|Ga0070670_100057479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3339Open in IMG/M
3300005334|Ga0068869_101743533Not Available556Open in IMG/M
3300005341|Ga0070691_10502498Not Available701Open in IMG/M
3300005344|Ga0070661_100018881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4909Open in IMG/M
3300005345|Ga0070692_10423713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria846Open in IMG/M
3300005345|Ga0070692_10431583Not Available839Open in IMG/M
3300005347|Ga0070668_100182263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1716Open in IMG/M
3300005354|Ga0070675_100952146Not Available788Open in IMG/M
3300005354|Ga0070675_101080237Not Available738Open in IMG/M
3300005455|Ga0070663_100152721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1772Open in IMG/M
3300005457|Ga0070662_101560012Not Available570Open in IMG/M
3300005467|Ga0070706_100389176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1298Open in IMG/M
3300005535|Ga0070684_100044046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3858Open in IMG/M
3300005549|Ga0070704_100044671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3080Open in IMG/M
3300005719|Ga0068861_100411448Not Available1203Open in IMG/M
3300005841|Ga0068863_100097122All Organisms → cellular organisms → Bacteria2797Open in IMG/M
3300006049|Ga0075417_10426960Not Available658Open in IMG/M
3300006572|Ga0074051_10019074All Organisms → cellular organisms → Bacteria2306Open in IMG/M
3300006577|Ga0074050_12094706Not Available719Open in IMG/M
3300006581|Ga0074048_10083166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria764Open in IMG/M
3300006969|Ga0075419_10326486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1039Open in IMG/M
3300009011|Ga0105251_10019345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3600Open in IMG/M
3300009094|Ga0111539_10112586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3192Open in IMG/M
3300009156|Ga0111538_10030746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6959Open in IMG/M
3300009553|Ga0105249_11890853Not Available669Open in IMG/M
3300009610|Ga0105340_1538095Not Available522Open in IMG/M
3300009789|Ga0126307_10001625All Organisms → cellular organisms → Bacteria14872Open in IMG/M
3300009810|Ga0105088_1091943Not Available553Open in IMG/M
3300009818|Ga0105072_1035526Not Available930Open in IMG/M
3300009836|Ga0105068_1124600Not Available518Open in IMG/M
3300009840|Ga0126313_11034851Not Available673Open in IMG/M
3300010038|Ga0126315_10146178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1397Open in IMG/M
3300010038|Ga0126315_11008510Not Available558Open in IMG/M
3300010040|Ga0126308_10005516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5952Open in IMG/M
3300010040|Ga0126308_10035430All Organisms → cellular organisms → Bacteria2817Open in IMG/M
3300010041|Ga0126312_11391360Not Available520Open in IMG/M
3300010399|Ga0134127_11760042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300010403|Ga0134123_10004390All Organisms → cellular organisms → Bacteria9221Open in IMG/M
3300011440|Ga0137433_1150131Not Available749Open in IMG/M
3300012204|Ga0137374_10196898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1741Open in IMG/M
3300012353|Ga0137367_10423753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium942Open in IMG/M
3300012355|Ga0137369_10376881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1029Open in IMG/M
3300012358|Ga0137368_10043550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3891Open in IMG/M
3300012360|Ga0137375_10348999Not Available1314Open in IMG/M
3300013306|Ga0163162_12700743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300014325|Ga0163163_10024400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5755Open in IMG/M
3300014745|Ga0157377_10206798Not Available1249Open in IMG/M
3300018055|Ga0184616_10030850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1707Open in IMG/M
3300018067|Ga0184611_1048274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1413Open in IMG/M
3300018469|Ga0190270_10747351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium977Open in IMG/M
3300018469|Ga0190270_10798164Not Available950Open in IMG/M
3300018476|Ga0190274_10065704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2711Open in IMG/M
3300019228|Ga0180119_1342521Not Available528Open in IMG/M
3300019255|Ga0184643_1366141Not Available734Open in IMG/M
3300019263|Ga0184647_1000924Not Available636Open in IMG/M
3300019263|Ga0184647_1441625Not Available608Open in IMG/M
3300020064|Ga0180107_1259020Not Available534Open in IMG/M
3300021081|Ga0210379_10057667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1560Open in IMG/M
3300021082|Ga0210380_10266643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium778Open in IMG/M
3300021510|Ga0222621_1094622Not Available633Open in IMG/M
3300025885|Ga0207653_10005629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3911Open in IMG/M
3300025904|Ga0207647_10032459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3353Open in IMG/M
3300025908|Ga0207643_10000517All Organisms → cellular organisms → Bacteria24731Open in IMG/M
3300025910|Ga0207684_10386363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1204Open in IMG/M
3300025917|Ga0207660_10583599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium910Open in IMG/M
3300025920|Ga0207649_10471938Not Available950Open in IMG/M
3300025926|Ga0207659_10041146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3235Open in IMG/M
3300025926|Ga0207659_10618098Not Available924Open in IMG/M
3300025944|Ga0207661_10865539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium832Open in IMG/M
3300026088|Ga0207641_10060247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3235Open in IMG/M
3300026089|Ga0207648_11870061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300026095|Ga0207676_10274689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1527Open in IMG/M
3300026900|Ga0207444_1000520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2643Open in IMG/M
3300026933|Ga0207578_1014291Not Available592Open in IMG/M
3300027523|Ga0208890_1000130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6698Open in IMG/M
3300027560|Ga0207981_1000109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia11850Open in IMG/M
3300027561|Ga0209887_1079928Not Available674Open in IMG/M
3300027577|Ga0209874_1076201Not Available827Open in IMG/M
3300027873|Ga0209814_10272393Not Available735Open in IMG/M
3300027907|Ga0207428_10389652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1021Open in IMG/M
3300028587|Ga0247828_10626249Not Available660Open in IMG/M
3300028592|Ga0247822_10980462Not Available697Open in IMG/M
3300028597|Ga0247820_10316897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1025Open in IMG/M
3300028712|Ga0307285_10188926Not Available574Open in IMG/M
3300028720|Ga0307317_10151848Not Available778Open in IMG/M
3300028784|Ga0307282_10052836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1818Open in IMG/M
3300028803|Ga0307281_10227848Not Available679Open in IMG/M
3300028819|Ga0307296_10083304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1705Open in IMG/M
3300028819|Ga0307296_10271159Not Available924Open in IMG/M
3300028885|Ga0307304_10223715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300030336|Ga0247826_10565364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium868Open in IMG/M
3300030606|Ga0299906_10002469All Organisms → cellular organisms → Bacteria15338Open in IMG/M
3300030620|Ga0302046_10151282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1904Open in IMG/M
3300030903|Ga0308206_1061956Not Available768Open in IMG/M
3300031892|Ga0310893_10051747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1367Open in IMG/M
3300031943|Ga0310885_10318737Not Available808Open in IMG/M
3300032002|Ga0307416_102061066Not Available673Open in IMG/M
3300032179|Ga0310889_10248034Not Available843Open in IMG/M
3300032211|Ga0310896_10052853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1649Open in IMG/M
3300033550|Ga0247829_10274588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1362Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.83%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment6.09%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.09%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.09%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.22%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.35%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.35%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.61%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.87%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005105Soil and rhizosphere microbial communities from Laval, Canada - mgHPCEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020064Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026900Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026933Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_044114602124908045SoilPPAFEGLRAVTERIVQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYTCLGCGRYA
deepsgr_027708502199352025SoilMERITSPPAFEGLRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
ICCgaii200_105071722228664021SoilMDRITSPSAFEGLRAETERLVRQGSDLPAFQTRTRAHCGDLTTFALQDRAGWYAYLSCGRYA
JGI10213J12805_1036195823300000858SoilMDQTSNPPAFVDLGAVTEHILQQGSDFPAFSTRTCWHRGRETTFALQDRVAWYACLACGRYA*
JGI11643J12802_1152752313300000890SoilMDRITSPSAFEGLRAETERLVRQGSDLPAFQTRTRAHCGDLTTFALQDRAGWYACLSCG
JGI10216J12902_10371861023300000956SoilMDRTTNPPAFEGLRAVTERIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
F14TB_10127021123300001431SoilMDRITSPPAFEGLRAETERPVRQGGDLPAFQTRTCAHCGDLTTFALQDRAGRYACLSCGRYA*
Ga0062593_10257048923300004114SoilMDRLTNPPAFEGLRAVTDRILQQGSDLPAFQTRTCGHCGRQTMFALQDRPGWYACLACGRYA*
Ga0062590_10135361623300004157SoilMDRITSPPAFEGLRAETERLALQGGDLPAFQKRTCAHCGELTTFALQDRAGWYACLSCGRYA*
Ga0062590_10140764523300004157SoilMERITSPSAFEGIRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0066812_101447413300005105SoilMDRTTNPPAFDVLRAVTKRIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGR
Ga0066809_1000048343300005168SoilMDRTTNPPAFEVLRAVTKRIVLQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
Ga0066810_1000002733300005169SoilMDRTTNPPAFEVLRAVTKRIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
Ga0065705_1016446713300005294Switchgrass RhizosphereMERITSPPAFEGFRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA*
Ga0070683_10056544123300005329Corn RhizosphereMERITSPSAFEGIRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0070670_10005747933300005331Switchgrass RhizosphereMERITSSPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0068869_10174353313300005334Miscanthus RhizosphereMERITSSPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLMCGRYA*
Ga0070691_1050249823300005341Corn, Switchgrass And Miscanthus RhizosphereMDRITSPPAFDGLRAETERLALQGGDLPAFQKRTCAHCGELTTFALQDRAGWYACLSCGRYA*
Ga0070661_10001888133300005344Corn RhizosphereMERITSPPAFEGIRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0070692_1042371323300005345Corn, Switchgrass And Miscanthus RhizosphereMERITSPPAFEGIRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0070692_1043158323300005345Corn, Switchgrass And Miscanthus RhizosphereMKMDRTTNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWY
Ga0070668_10018226323300005347Switchgrass RhizosphereMKMDRTTNPPAFESLRAVTERILQRGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0070675_10095214623300005354Miscanthus RhizosphereMDRLTNPPAFEGLRAVTDRILQQGSDLPAFQTRTCGHCGRQTMFALQDRPGWYACFACGRYA*
Ga0070675_10108023723300005354Miscanthus RhizosphereMKMDRTTNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0070663_10015272123300005455Corn RhizosphereMERITSSPAFEGVRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0070662_10156001223300005457Corn RhizosphereMDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGDLTTFALQDRAGWYACLSCGRYA*
Ga0070706_10038917623300005467Corn, Switchgrass And Miscanthus RhizosphereMERITSPPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0070684_10004404653300005535Corn RhizosphereMERITSPSAFEGIRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLMCGRYA*
Ga0070704_10004467153300005549Corn, Switchgrass And Miscanthus RhizosphereMDRTPNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0068861_10041144833300005719Switchgrass RhizosphereMKMDRTTNPPAFESLRAVTDRILQQGSDLPAFQTRTCGHCGRQTMFALQDRPGWYACLACGRYA*
Ga0068863_10009712213300005841Switchgrass RhizosphereSAFEGIRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0075417_1042696023300006049Populus RhizosphereMDRTTNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0074051_1001907423300006572SoilVKTDRTTNPPAFEGPRAVTERILQQGSDLPAFQTRTCGHCGRQTTFALQDGAGWYARLACGRYA*
Ga0074050_1209470623300006577SoilMDPTTNPPPFEGLRAVTERMIVQRGSELPAFQTRTCAHCGRQTTFALQDRAGWYACLACGRYA*
Ga0074048_1008316623300006581SoilMDRTTNPPAFDVLRAVTKRIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
Ga0075419_1032648623300006969Populus RhizosphereMDRTTNPHAFDGLRAVTERILQRGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0105251_1001934543300009011Switchgrass RhizosphereMERITSPPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFELQDRAGWYACLTCGRYA*
Ga0111539_1011258623300009094Populus RhizosphereMDRTTPAFESLRAVTERTLQRGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA
Ga0111538_1003074633300009156Populus RhizosphereVEVKMERTTSPPAFEGLRSETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA*
Ga0105249_1189085323300009553Switchgrass RhizosphereMDRTTSPPAFEGLRAETERLVRQGSDLPAFPTRTCAHCGELTTFALQDRAGWYACLACGRYA*
Ga0105340_153809513300009610SoilTTSVPAFEGLRAHTERLVRQGSDLPAFQTRTCAHCGDLTTFALQDRAGWYACLACGRYA*
Ga0126307_10001625113300009789Serpentine SoilMDRTTNPPPFEGLRAVTERIVQQGSDLPAFQTRTCGHCARQTTFALQDLAGWYACLACGRYA*
Ga0105088_109194313300009810Groundwater SandMDRTTYPPAFEGRRADAERIVQRGSDLPAFQTRTCGHCGRQSTFALQDRAGWYACLACGRYA*
Ga0105072_103552613300009818Groundwater SandMDRNMNPPAFESLRAVTERILQHGSDLPAFQTRTCGHCGRQSTFALQDRAGWYACLACGRYA*
Ga0105068_112460013300009836Groundwater SandAFESLRAVTERILQHGSDLPAFQTRTCGHCGRQSTFALQDRAGWYACLACGRYA*
Ga0126313_1103485123300009840Serpentine SoilMDRTTNPPPFEGLRAVTERIVQQGSDLPAFQTRTCGHCGRQTTFALQDLAGWYACLACGRYA*
Ga0126315_1014617813300010038Serpentine SoilMDRTTNLPAFEGLRAVTERIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
Ga0126315_1100851013300010038Serpentine SoilTEVKMDRTTNPPPFEGLRAVTERIVQQRSDLPAFQTRTCGHCARQTTFALQDLAGWYACLACGRYA*
Ga0126308_1000551613300010040Serpentine SoilMDPTTNPPPFEGLRAVTERIVQQGSDLPTFQTRTCGHCGRQTTFALQDLAGWYACLACGRYA*
Ga0126308_1003543073300010040Serpentine SoilMDRTTNPPPFEGLRAVTERIVQQRSDLPAFQTRTCGHCARQTTFALQDLAGWYACLACGRYA*
Ga0126312_1139136013300010041Serpentine SoilMDRTTNPPAFEGLRAVTERIVQQGSDLPAFQTRTGGHCGRQTTFALQDRAGWYVCLACGRYA*
Ga0134127_1176004223300010399Terrestrial SoilMDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLSCGRYA*
Ga0134123_1000439013300010403Terrestrial SoilLRAVTERILQRGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0137433_115013123300011440SoilMDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGNLTTFALQDRAGWYACLSCGRYA*
Ga0137374_1019689823300012204Vadose Zone SoilMDRTTSPPAFEGLRAQTERIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRFA*
Ga0137367_1042375313300012353Vadose Zone SoilMDRTTNPPAFEGLRAVTERIVQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA*
Ga0137369_1037688123300012355Vadose Zone SoilMDRNMNPPAFEGLRAVTERILQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
Ga0137368_1004355073300012358Vadose Zone SoilMDRTSSPPAFEGLRAQTERIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRFA*
Ga0137375_1034899933300012360Vadose Zone SoilMDRTTSPPAFEGLRAQSERIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRYA*
Ga0163162_1270074313300013306Switchgrass RhizosphereITSPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGNLTTFALQDRAGWYACLACGRYA*
Ga0163163_1002440023300014325Switchgrass RhizosphereMERITSPPAFEGIRAETERLVRQGCDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA*
Ga0157377_1020679823300014745Miscanthus RhizosphereMKMDRTTNPPAFESLRAVTERILQRWSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA*
Ga0184616_1003085023300018055Groundwater SedimentMERTTSPPAFEGLRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
Ga0184611_104827413300018067Groundwater SedimentEWRLKMERTTSPPAFEGLRAETERLIRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLSCGRYA
Ga0190270_1074735113300018469SoilMDRITFPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGDLTTFALQDRAGWYACLSCGRYA
Ga0190270_1079816423300018469SoilMDRNTNPPAFEGLRAQTERIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRFA
Ga0190274_1006570433300018476SoilMDRITSPPAFEGLRAQTKRIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRYA
Ga0180119_134252113300019228Groundwater SedimentMDRTTSVPTFEGLRAHTERLVRQGSDLPAFQTRTCAHCGDLTTFALQDRAGWYACLACGRYA
Ga0184643_136614123300019255Groundwater SedimentMDRITSPSAFEGLRDETERLVRQGSDLPAFQARTCTHCGDLTTFALQDRAGWYACLACGRFA
Ga0184647_100092413300019263Groundwater SedimentMDRITSPPAFEALGAESEGLVRRGSDLPAFQTRTCAHCGELTTFVLQDPAGWYACLSCGRYA
Ga0184647_144162513300019263Groundwater SedimentMDRITTPPAFEGLRAESERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGR
Ga0180107_125902013300020064Groundwater SedimentVKMDRTTSVPTFEGLRAHTERLVRQGSDLPAFQTRTCAHCGDLTTFALQDRAGWYACLACGRYA
Ga0210379_1005766733300021081Groundwater SedimentMDRTTSPPAFEGLRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
Ga0210380_1026664313300021082Groundwater SedimentMDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
Ga0222621_109462213300021510Groundwater SedimentMDRITSPPAFEGLRDETERLVRQGSDLPAFQARTCTHCGDLTTFALQDRAGWYACLACGRFA
Ga0207653_1000562933300025885Corn, Switchgrass And Miscanthus RhizosphereMERITSSPAFEGVRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207647_1003245933300025904Corn RhizosphereMDRTPNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA
Ga0207643_1000051743300025908Miscanthus RhizosphereMERITSSPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207684_1038636313300025910Corn, Switchgrass And Miscanthus RhizosphereMERITSPPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207660_1058359923300025917Corn RhizosphereMDRITSPPAFEGLRAETERLALQGGDLPAFQKRTCAHCGELTTFALQDRAGWYACLSCGRYA
Ga0207649_1047193823300025920Corn RhizosphereMERITSPPAFEGIRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207659_1004114643300025926Miscanthus RhizosphereMERITSPSAFEGIRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207659_1061809823300025926Miscanthus RhizosphereMKMDRTTNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA
Ga0207661_1086553923300025944Corn RhizosphereMERITSPSAFEGIRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207641_1006024753300026088Switchgrass RhizosphereMERITSPPAFEGIRAETERLVRQGCDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207648_1187006123300026089Miscanthus RhizosphereTSPPAFDGLRAETERLALQGGDLPAFQKRTCAHCGELTTFALQDRAGWYACLSCGRYA
Ga0207676_1027468933300026095Switchgrass RhizosphereTSSPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207444_100052053300026900SoilMERITSPPAFEGIRAETERLVRRGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLTCGRYA
Ga0207578_101429123300026933SoilMKMDRTTNPPAFESLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA
Ga0208890_100013033300027523SoilMDRTTNPPAFDVLRAVTKRIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA
Ga0207981_100010943300027560SoilMDRTTNPPAFEVLRAVTKRIVQQGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA
Ga0209887_107992823300027561Groundwater SandMDRNMNPPAFESLRAVTERILQHGSDLPAFQTRTCGHCGRQSTFALQDRAGWYACLACGRYA
Ga0209874_107620113300027577Groundwater SandMDRTTYQPAFEGLRADAERIVKRGSDLPAFQTRTCGHCGRQTTFALQDRAGWYACLACGRYA
Ga0209814_1027239323300027873Populus RhizosphereMDRTTPAFESLRAVTERILQRGSDLPAFQTRTCWHCGRQTTFALQDRAGWYACLACGRYA
Ga0207428_1038965223300027907Populus RhizosphereFEGFRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
Ga0247828_1062624923300028587SoilMERITSPPAFEGFRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
Ga0247822_1098046223300028592SoilMDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLSCGRYA
Ga0247820_1031689733300028597SoilMDQITSPPAFEGLRAETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAAWY
Ga0307285_1018892623300028712SoilMDRITSPPAFEALGAESERLVRQGSELRAFQTRTCAHCGELTTFALQDRAGWYACLSCGRYA
Ga0307317_1015184823300028720SoilMDRITSPPAFEGLRAESERLVRQGSELRAFQTRTCAHCGELTTFALQDRAGWYACLSCGRYA
Ga0307282_1005283633300028784SoilMDRTMNPPAFEGLRAVTERILQQESDLPPFQTRTCARCGRQTTFALQDRAGWYACLACGY
Ga0307281_1022784823300028803SoilMDRITSPPAFEGLRAETERLVRQGSDLPAFQTRTCGHCGELTTFALQDRAGWYACLACGRYA
Ga0307296_1008330423300028819SoilMDRPTSPPAFEGLRAETERLVRQGSDLPAFQTRTCAYCGDLTTFALQDRAGRYACLACGRYA
Ga0307296_1027115923300028819SoilMDRTTSPPAFEGLRAETEHLVRQGSDLPAFQARTCAHCGDLTTFALQDRAGWYACLACGRFA
Ga0307304_1022371523300028885SoilAFEGLRAVTERILQQESDLPPFQTRTCARCGRQTTFALQDRAGWYACLACGYA
Ga0247826_1056536423300030336SoilMDRTPFPTAFEGLRTQTERLVRQGSDLPAFQARTCAHCGELTTFALQDRAGWYACLACGRYA
Ga0299906_1000246933300030606SoilMDRITFPPAFEGLRAQTKRIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRYA
Ga0302046_1015128233300030620SoilPPAFEGLRAQTKRIVRQGSDLPAFQTRTCAHCGNLTTFVLQDLAGWYACLACGRYA
Ga0308206_106195623300030903SoilMDRTTSPPAFEGLRAQTERIVRQGSDLPGFQTRTCAHCGNVTTFVLQDRAGWYACLACGRFA
Ga0310893_1005174743300031892SoilMERITSSPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYA
Ga0310885_1031873723300031943SoilMERITSSPAFEGVRAETERLVRQGSDLPAFQTRTCAHCGELTTFELQDRAGWYACLTCGRYA
Ga0307416_10206106623300032002RhizosphereMDRTTNPPAFEGLRAVTERIVQQGSDLPTFQTRTCGHCGRQTTFALQDLAGWYACLACGRYA
Ga0310889_1024803423300032179SoilMDQMTSPPAFEGLRAETERLVRQGSDLPAFQTRTCAHCGELTTFALQDRAGWYACLSCGRYA
Ga0310896_1005285333300032211SoilMERTTSPPAFEGLRSETERLVRQGSDLPAFQTRTCTHCGDLTTFALQDRAGWYACLTCGRYA
Ga0247829_1027458823300033550SoilMDRTTNPPAFEGLRAVTERILQQGSDLPAFQTRTCWHCGRQTTFALQDRVGWYACLACGRYA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.