Basic Information | |
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Family ID | F080629 |
Family Type | Metagenome |
Number of Sequences | 115 |
Average Sequence Length | 45 residues |
Representative Sequence | MKFYTDDYNVDVTQSGATNQSYSATFNCTNNCTKTISITQQ |
Number of Associated Samples | 96 |
Number of Associated Scaffolds | 115 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 99.13 % |
% of genes from short scaffolds (< 2000 bps) | 88.70 % |
Associated GOLD sequencing projects | 82 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.28 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (81.739 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (29.565 % of family members) |
Environment Ontology (ENVO) | Unclassified (83.478 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (93.913 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 13.04% Coil/Unstructured: 86.96% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.28 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Oceanic Surface Seawater Seawater Aqueous Seawater Marine Seawater Estuarine Marine Estuarine Water Pelagic Marine Seawater Pelagic Marine Marine Seawater Deep Subsurface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOWin2010_101310992 | 3300000117 | Marine | VDLTQSGAGAHTANMVFTTDDYTVDVNQLGSTNQTYTATFDCSANCNKTITITQQ* |
JGI20151J14362_102130273 | 3300001346 | Pelagic Marine | FYTTGYEVDVTQSGATNQSYTATFNCTSECTKTITITQQ* |
JGI24006J15134_100113321 | 3300001450 | Marine | TANMKFYTDDYNVDVTQAGSTNQAYSATFNCTSSCTKTISITQQ* |
JGI24006J15134_101396201 | 3300001450 | Marine | AHTANMKFYTDNYDVDVTQSGSTNQAYSATFNCSSNCTKTISITQQ* |
JGI24005J15628_100517571 | 3300001589 | Marine | GSHSANMKFYTDDYNVNVIQRGVNNQAYSVTFDCSANCTKTISITQE* |
JGI24520J20079_10113161 | 3300001735 | Marine | GSHTSNMKFYTNDYDVTVVQKGWSNKSYTATFNCTSNCDKTITIMQEN* |
JGI25131J35506_10009064 | 3300002511 | Marine | NGSHTSLIKFYTDDYDVTVVQKGTTNKSYSATFNCVSNCDKTISITQQN* |
Ga0098038_11933121 | 3300006735 | Marine | DVDLTQSGAGAHTALMKFYTDNYDVDVTQLGSTAQSYSATFNCTSNCTKTVSITQQ* |
Ga0098033_10082848 | 3300006736 | Marine | SHTSNIKFYTDDYDVTVVQKGTTNKSYSATFNCSSNCDKTITIMQEN* |
Ga0098033_10863721 | 3300006736 | Marine | KFYTDDYDVTVVQKGATNKSYTATFNCTSNCTKTISITQSD* |
Ga0098033_11782761 | 3300006736 | Marine | YDVTVVQKGTTNKSYSATFNCTSSCDKTITIMQEN* |
Ga0098042_10321211 | 3300006749 | Marine | DDYNLNVTQSGATNQSYTATFNCTQNCAKTVTITQE* |
Ga0098039_10038129 | 3300006753 | Marine | GSHTSNIKFYTDDYDVTVVQKGTTNKSYSATFNCSSNCTKTISIMQEN* |
Ga0098039_10125021 | 3300006753 | Marine | NGVHGSNMKFYVDDYDVTVVQKGATNKSYVATFNCTSNCNKVITITQSD* |
Ga0098055_11267383 | 3300006793 | Marine | FYSTGYDVDVTQLGATNQSYTATFNCTSSCTKTISITQQ* |
Ga0070750_104339671 | 3300006916 | Aqueous | DDYTVDVNQLGSTNQTYTATFDCSANCNKTITITQQ* |
Ga0098041_10853801 | 3300006928 | Marine | QSGAGAHTALMKFYTDNYDVDVTQLGSTAQSYSATFNCTSNCTKTVSITQQ* |
Ga0114898_11171071 | 3300008216 | Deep Ocean | IKFYTDDYDVTVVQKGTTNKSYSATFNCSSNCNKTISIMQEN* |
Ga0114899_10487482 | 3300008217 | Deep Ocean | AHTSNIKFYTDDYNVNVIQKGATNQAYSVTFNCVSNCTKTISITQE* |
Ga0114910_11937431 | 3300008220 | Deep Ocean | DVTVVQKGTTNKSYSATFNCSSNCNKTITIMQEN* |
Ga0114916_10438981 | 3300008221 | Deep Ocean | VLTQQGNGSHSANMKFYTDDYNVNVIQRGVNNQAYSVTFNCISNCTKTISITQE* |
Ga0102813_11587073 | 3300009003 | Estuarine | DLTQYGTGAHVADMKFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ* |
Ga0102814_105816621 | 3300009079 | Estuarine | DNTNVDLTQSGAGAHTANMVFTTDNYTVDVDQLGSSNQSYTATFDCSANCTKTITITQQ* |
Ga0102815_103415363 | 3300009080 | Estuarine | TTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ* |
Ga0114902_10251891 | 3300009413 | Deep Ocean | SNMKFYTDDYDVTVVQKGATNKSYVATFNCNTNCTKTISITQSD* |
Ga0114909_10705532 | 3300009414 | Deep Ocean | SHTSNMKFYTDDYDVTVVQKGTTNKSYSATFNCYSNCTKTISIMQEN* |
Ga0115554_11275103 | 3300009472 | Pelagic Marine | GAGAHVANMQFYTTGYEVDVTQSGATNQSYTATFNCTSECTKTITITQQ* |
Ga0115555_12794811 | 3300009476 | Pelagic Marine | NVTQLGSTNQSYAATFNCTESCTKTITITQQ*NLK* |
Ga0115011_113817811 | 3300009593 | Marine | TQSGAGAHTANMKFYTDDYTVDVDQLGSTNQTYTATFNCTQNCTKTITITQQ* |
Ga0114901_11466852 | 3300009604 | Deep Ocean | DYDVTVVQKGTTNKSYSATFNCSSNCNKTITIMQEN* |
Ga0114906_10226184 | 3300009605 | Deep Ocean | MKFYTDDYDVTVVQKGATNKSYVATFNCNTNCNKTITIMQQD* |
Ga0105236_10234222 | 3300009619 | Marine Oceanic | GNGSHTSNMKFYTDDYDVTVVQKGTTNKSYSATFNCYSNCTKTISIMQEN* |
Ga0114933_101889203 | 3300009703 | Deep Subsurface | FYNDADNTDVDLTQSGSGAHTANMKFYTDNYNVDVTQLGSNNQSYSATFNCTSNCTKTVTITQQ* |
Ga0105235_1284191 | 3300009791 | Marine Oceanic | IKFYTDDYDVTVVQKGATNKSYSATFNCTSNCDKTISITQSD* |
Ga0098043_10954274 | 3300010148 | Marine | YTDDYNLNVTQSGATNQSYTATFNCTQNCTKTVTITQE* |
Ga0098043_11597273 | 3300010148 | Marine | YNLNVTQSGATNQSYTATFNCTSNCTKTITITQE* |
Ga0114934_100661721 | 3300011013 | Deep Subsurface | MKFYTDDYDVTVVQKGTTNKSYSATFNCSSNCTKTITITQQN* |
Ga0160423_111526722 | 3300012920 | Surface Seawater | MKFYTDDYNLNVTQSGATNQSYTATFNCTSNCTKTITITQE* |
Ga0163180_104086191 | 3300012952 | Seawater | MKFYTNNYDVDVTQSGATNQSYSATFNCSSNCNKTITITQQ* |
Ga0163111_105274541 | 3300012954 | Surface Seawater | TANMKFYTDNYDVDVTQSGANNQSYSATFNCTSNCTKTVSITQQ* |
Ga0163111_121432871 | 3300012954 | Surface Seawater | DLTQSGAGAHTALMKIYTDNYDLDVTQLGSTAQSYSATFNCTSNCTKTVSITQQ* |
Ga0181377_10159741 | 3300017706 | Marine | DLTQYGAGAHVANMKFYTTGYDVDVTQSGATNQSYTATFNCTSECTKTITITQQ |
Ga0181387_10406671 | 3300017709 | Seawater | HVANMKFYTTGYDVGVTQSGATNQSYTATFNCTSECTKTITITQQ |
Ga0181387_10508973 | 3300017709 | Seawater | GTGAHVANMKFYTTGYNVDVTQLGATNQTYTATFNCTQNCTKTISITQQ |
Ga0181412_10609633 | 3300017714 | Seawater | QYGAGAHVANMKFYTTGYDVGVTQSGATNQSYTATFNCTSECTKTITITQQ |
Ga0181404_10681271 | 3300017717 | Seawater | TDDYNVNVIQKGVNNQAYSVTFNCVSNCTKTISITQQ |
Ga0181418_11782812 | 3300017740 | Seawater | GSHSANMKFYTDDYNVNVIQKGVNNQAYSVTFDCVSNCTKTISITQQ |
Ga0181402_10681631 | 3300017743 | Seawater | FYNSDNEVDLTQYGAGAHVANMKFYTTGYDVGVTQSGATNQSYTATFNCTSECTKTITITQQ |
Ga0181402_11289783 | 3300017743 | Seawater | TQTGSGAHTANMKFYTDDYDVDVTQSGANNQAYSATFNCTSECTKTISITQQ |
Ga0181402_11522143 | 3300017743 | Seawater | FYTTGYDVDVTQLGATNQSYTATFNCTSSCTKTITITQQ |
Ga0187219_10987673 | 3300017751 | Seawater | DADNTDVDLTQTGSGAHTANMKFYTDDYDVDVTQSGANNQAYSATFNCTSECTKTISITQ |
Ga0181408_10639552 | 3300017760 | Seawater | YNSDNEVDLTQYGTGAHVANMKFYTTGYDVDVTQLGATNQTYTATFNCTADCTKTISITQ |
Ga0181422_11819801 | 3300017762 | Seawater | TGYDVDVTQLGATNQTYTATFNCTADCTKTISITQQ |
Ga0181413_10744701 | 3300017765 | Seawater | DDYTVDVDQLGSTNQTYTATFDCSANCNKTITITQQ |
Ga0181406_10323611 | 3300017767 | Seawater | IFFYNSDNEVDLTQYGTGAHVANMKFYTTGYDVDVTQLGATNQTYTATFNCTADCTKTISITQQ |
Ga0187220_10580351 | 3300017768 | Seawater | KFYTTGYDVNVTQLGATNQTYTATFNCTADCTKTISITQQ |
Ga0181432_11945951 | 3300017775 | Seawater | LKFYTDDYDVTVVQKGTTNKSYSATFNCSSNCNKTITIMQEN |
Ga0181379_13101031 | 3300017783 | Seawater | TQYGTGAHVANMKFYTTGYDVDVTQLGATNQTYTATFNCTADCTKTISITQQ |
Ga0181424_104575582 | 3300017786 | Seawater | VDLTQYGTGAHVADMKFYTTGYNVDVTQLGATNQTYTATFNCTADCTKTISITQQ |
Ga0211521_101811372 | 3300020428 | Marine | QYGTGAHTANMKFYTNNYNVDVTQSGATNQSYSATFNCSSNCNKTITITQQ |
Ga0211576_103397412 | 3300020438 | Marine | MKFYTDDYNVDVTQSGATNQSYSATFNCTNNCTKTISITQQ |
Ga0211475_100008731 | 3300020468 | Marine | YSADNDVDLTQYGTGAHVANMKFYTTDYNVDVTQLGSTNQTYTATFNCSQNCTKTISITQ |
Ga0213869_104586241 | 3300021375 | Seawater | TDDYDVDVTQSGATNQSYSATFNCTSSCTKTISITQQ |
Ga0213861_101252631 | 3300021378 | Seawater | ANMVFTTDDYTVDVDQLGSSNQSYTATFDCSANCNKTITITQQ |
Ga0206681_103542912 | 3300021443 | Seawater | IKFYTDDYDVTVVQKGTTNKSYSATFNCSSNCDKTITITQQN |
Ga0222717_104066581 | 3300021957 | Estuarine Water | YGTGAHVADMKFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0224906_11415783 | 3300022074 | Seawater | MKFYTDDYNLNVTQSGTNNQSYTATFNCTQNCTKTLTITQE |
Ga0228675_10556872 | 3300024247 | Seawater | TQYGTGAHVANMKFYTTGYDVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
(restricted) Ga0233444_101326481 | 3300024264 | Seawater | TGYDVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0228656_10468211 | 3300024322 | Seawater | ANMKFYTTGYDVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0207889_10140302 | 3300025042 | Marine | TDDYDVTVVQKGWTNKSYTATFNCTSNCNKTITITQQN |
Ga0207897_1092641 | 3300025047 | Marine | TSNMKFYTDDYDVTVVQKGTTNKSYTATFNCTSNCNKTITITQQN |
Ga0207898_10244242 | 3300025049 | Marine | HTSLIKFYTDDYDVTVVQKGATNKSYSATFNCTSNCDKTISITQSD |
Ga0208666_11114341 | 3300025102 | Marine | DVDLTQSGAGAHTALMKFYTDNYDVDVTQLGSTAQSYSATFNCTSNCTKTVSITQQ |
Ga0208666_11385311 | 3300025102 | Marine | NSDNEVDLTQYGTGAHVANMKFYTTGYNVDVTQLGATNQTYTATFNCTQNCTKTISITQQ |
Ga0208793_10953201 | 3300025108 | Marine | DDYNLNVTQSGSNNQAYTATFNCTQNCTKTITITQE |
Ga0209349_10588301 | 3300025112 | Marine | DDYDVTVVQKGTTNKSYSATFNCSSNCTKTISIMQEN |
Ga0209434_10535942 | 3300025122 | Marine | FYTDDYDVTVVQKGTTNKSYSATFNCSSNCTKTISIMQEN |
Ga0209434_10843601 | 3300025122 | Marine | KFYTDDYDVTVVQKGTTNKSYSATFNCTSSCDKTITIMQEN |
Ga0209644_10564301 | 3300025125 | Marine | DDYDVTVVQKGTTNKSYSATFNCSSNCDKTITIMQEN |
Ga0209644_11115071 | 3300025125 | Marine | TDDYDVTVVQKGTTNKAYSATFNCVSNCDKTISITQQN |
Ga0209644_11252342 | 3300025125 | Marine | DYDVTVVQKGTTNKSYTATFNCTSNCDKTITITQQN |
Ga0209634_10111861 | 3300025138 | Marine | AGAHTANMVFTTDDYTVDVNQLGSTNQTYTATFDCSANCNKTITITQQ |
Ga0209634_12077881 | 3300025138 | Marine | NMKFYTDDYTVNVTQSGATNQAYTAVFNCNTDCTKTLTITQQ |
Ga0209337_10173861 | 3300025168 | Marine | DDYTVNVTQSGATNQAYTAVFNCNTDCTKTLTITQQ |
Ga0208182_10411832 | 3300025251 | Deep Ocean | GSHTSNIKFYTDDYDVTVVQKGTTNKSYSATFNCYSNCTKTISIMQEN |
Ga0208182_10463232 | 3300025251 | Deep Ocean | MKFYTDDYDVTVVQKGTTNKSYSATFNCTGSCNKTISIMQEN |
Ga0208179_10299051 | 3300025267 | Deep Ocean | DDYDVTVVQKGTTNKSYSATFNCSSNCNKTITIMQEN |
Ga0208179_10916031 | 3300025267 | Deep Ocean | YDVTVVQKGTTNKSYSATFNCSSNCNKTITIMQEN |
Ga0208180_10500372 | 3300025277 | Deep Ocean | GSHTSNMKFYTDDYDVTVVQKGTTNKSYSATFNCTGSCNKTISIMQEN |
Ga0208030_10251841 | 3300025282 | Deep Ocean | HTSNMKFYTDDYDVTVVQKGTTNKSYTATFNCTSNCNKTITITQQN |
Ga0208315_11127402 | 3300025286 | Deep Ocean | YDVTVVQKGTTNKSYTATFNCTSNCDKTITITQQN |
Ga0208315_11320212 | 3300025286 | Deep Ocean | SHTSNMKFYTDDYDVTVVQKGTTNKSYSATFNCTGSCNKTISIMQEN |
Ga0208450_10160791 | 3300025301 | Deep Ocean | TQQGNGAHGSNMKFYTDDYDVTVIQKGATNKSYVATFNCTSNCTKTISITQSD |
Ga0208450_10314551 | 3300025301 | Deep Ocean | FYTDDYDVTVVQKGTTNKSYSATFNCYSNCTKTISIMQEN |
Ga0208684_10389432 | 3300025305 | Deep Ocean | TSNIKFYTDDYDVTVVQKGTTNKSYSATFNCYSNCTKTISIMQEN |
Ga0209557_10192844 | 3300025483 | Marine | AHVADMKFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0209137_11064703 | 3300025767 | Marine | FYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0209832_11538201 | 3300025830 | Pelagic Marine | NVTQLGSTNQSYAATFNCTESCTKTITITQQXNLK |
Ga0209666_10297817 | 3300025870 | Marine | LTQYGTGAHVADMKFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0209425_104935452 | 3300025897 | Pelagic Marine | DNEVDLTQYGTGAHVANMTFYTTGYDVDVTQLGATNQTYTATFNCTADCTKTISITQQ |
Ga0208921_10398982 | 3300027188 | Estuarine | NSDNEVDLTQYGTGAHVADMKFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0208439_10068353 | 3300027278 | Estuarine | GTGAHVADMKFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0208305_100603711 | 3300027753 | Estuarine | KFYTTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0208671_100800993 | 3300027757 | Estuarine | TTGYNVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0209279_101093482 | 3300027771 | Marine | QGNGSHTANMKFYTDDYNVNVIQKGVNNQAYSVTFSCVSNCTKTISITQE |
Ga0209503_103333471 | 3300027859 | Marine | TVVNLTQYGTGAHAANMKFYTDDYNLNVTQSGANNQSYTATFNCTSNCTKTITITQE |
Ga0256382_11510971 | 3300028022 | Seawater | TDDYDVTVVQKGTTNKSYSATFNCYSNCTKTISIMQEN |
Ga0257106_10417741 | 3300028194 | Marine | ADADNSTVNLTQYGSGAHAANMKFYTDDYTVNVTQSGATNQAYTAVFNCNTDCTKTLTITQQ |
Ga0228639_10571444 | 3300028397 | Seawater | TDVDLTQTGSGAHTANMKFYTDDYDVDVTQSGANNQAYSATFNCTSECTKTISITQQ |
Ga0228615_10759872 | 3300028418 | Seawater | DLTQYGTGAHVANMKFYTTGYDVDVTQLGATNQSYTATFNCTADCTKTISITQQ |
Ga0315328_108722851 | 3300031757 | Seawater | FYTDDYDVTVVQKGTTNKSYSATFNCSSNCNKTITIMQEN |
Ga0315315_103564134 | 3300032073 | Seawater | TGSGAHTANMKFYTDDYDVDVTQSGANNQAYSATFNCTSECTKTISITQQ |
Ga0315315_111937381 | 3300032073 | Seawater | AHVANMKFYTTGYNVDVTQLGATNQTYTATFNCTQNCTKTISITQQ |
Ga0315334_109344872 | 3300032360 | Seawater | DYDVTVVQKGTTNKSYSATFNCSSNCTKTITITQEN |
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