NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080474

Metagenome / Metatranscriptome Family F080474

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080474
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 120 residues
Representative Sequence NGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Number of Associated Samples 102
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.52 %
% of genes from short scaffolds (< 2000 bps) 90.43 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (51.304 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere
(6.957 % of family members)
Environment Ontology (ENVO) Unclassified
(47.826 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(70.435 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.
1ICChiseqgaiiDRAFT_24160892
2ICChiseqgaiiFebDRAFT_145508722
3F14TC_1016664321
4JGI10216J12902_1043183811
5Ga0062594_1026135822
6Ga0065712_104275431
7Ga0065705_100269721
8Ga0070658_108665932
9Ga0070676_103010811
10Ga0070690_1006415221
11Ga0068869_1000881533
12Ga0070660_1003004822
13Ga0070660_1014834011
14Ga0070687_1002975261
15Ga0070671_1001478921
16Ga0070713_1013070761
17Ga0070711_1014291402
18Ga0070700_1001164123
19Ga0068867_1012426912
20Ga0070685_100729881
21Ga0070699_1000274301
22Ga0070684_1016249502
23Ga0070704_1008968992
24Ga0068852_1011113681
25Ga0068859_1014605152
26Ga0068864_1003926762
27Ga0068864_1023679631
28Ga0068866_102786422
29Ga0068861_1000975574
30Ga0068862_1006932052
31Ga0082029_13841701
32Ga0097621_1013108561
33Ga0075433_100792154
34Ga0079217_101645732
35Ga0068865_1014072832
36Ga0075419_101410301
37Ga0079218_101420493
38Ga0079218_110177721
39Ga0105240_110716692
40Ga0105245_103814811
41Ga0105243_107340732
42Ga0105241_114023102
43Ga0105248_110563401
44Ga0105249_121761901
45Ga0126305_103584102
46Ga0126304_101597901
47Ga0126311_117170472
48Ga0126383_105010852
49Ga0134121_112919892
50Ga0126317_102773051
51Ga0150985_1088146882
52Ga0150985_1134905091
53Ga0150985_1138710961
54Ga0150984_1042680931
55Ga0157330_10029422
56Ga0164303_112263641
57Ga0164302_103131352
58Ga0164305_109566952
59Ga0157370_110119271
60Ga0163162_101231904
61Ga0157372_116517752
62Ga0157375_103899041
63Ga0157375_104247091
64Ga0163163_107215021
65Ga0182007_100414063
66Ga0132258_134659161
67Ga0132256_1020981521
68Ga0132257_1003652013
69Ga0132257_1036630111
70Ga0132255_1001702171
71Ga0132255_1038178881
72Ga0132255_1063192751
73Ga0190274_109169062
74Ga0197907_106592091
75Ga0206356_103273281
76Ga0126371_132769592
77Ga0207653_102743041
78Ga0207642_100284081
79Ga0207705_112557661
80Ga0207654_105662031
81Ga0207707_112570651
82Ga0207657_100352351
83Ga0207644_107983151
84Ga0207690_111341331
85Ga0207690_117862641
86Ga0207706_105320251
87Ga0207661_119877282
88Ga0207651_120931931
89Ga0207640_114477421
90Ga0207658_102330041
91Ga0207639_119658471
92Ga0207708_101543021
93Ga0207702_117464531
94Ga0207676_104038671
95Ga0207698_115318892
96Ga0209818_10770401
97Ga0209814_102025401
98Ga0209486_100820413
99Ga0209486_110697481
100Ga0209382_102343523
101Ga0209382_116308532
102Ga0209382_117542152
103Ga0268266_106445072
104Ga0247821_107282162
105Ga0314816_10538142
106Ga0314825_1101472
107Ga0310888_101093653
108Ga0307405_112777212
109Ga0307413_106420971
110Ga0310907_108469981
111Ga0310904_107472402
112Ga0310885_102549012
113Ga0310884_108362461
114Ga0307409_1002521931
115Ga0247830_104883662
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.67%    β-sheet: 34.67%    Coil/Unstructured: 62.67%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120NGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
48.7%51.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Switchgrass Rhizosphere
Termite Nest
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Agricultural Soil
Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
4.3%5.2%6.1%6.1%5.2%4.3%5.2%4.3%5.2%4.3%7.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_241608923300000033SoilRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFIESRYTTAYTEGENTKWVPVVIGLKWR
ICChiseqgaiiFebDRAFT_1455087223300000363SoilLNGRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFIESRYTTAYTEGENTKWVPVVIGLKWR*
F14TC_10166643213300000559SoilDPNIWSATANLTLDLARFGESRRGALYLVGGGGVFRFTDFNNFDRSDNDPESSXXXKPVTKGGLTGGAGLAFPIGGASLFLESRYTNAFTEGENTRWVPIVVGLKWR*
JGI10216J12902_10431838113300000956SoilNIWSATANLTLDLMKFGQDRRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPIGGASFFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0062594_10261358223300005093SoilVSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0065712_1042754313300005290Miscanthus RhizospherePVSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0065705_1002697213300005294Switchgrass RhizosphereRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070658_1086659323300005327Corn RhizosphereDLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0070676_1030108113300005328Miscanthus RhizosphereLDLLRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFQGEPVTKGGLTGGAGLAFPIGGTSLFVESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0070690_10064152213300005330Switchgrass RhizosphereSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0068869_10008815333300005334Miscanthus RhizosphereDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070660_10030048223300005339Corn RhizosphereDLGYSRFNGREAGTNGLLAQPDDPNIWSATANLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070660_10148340113300005339Corn RhizosphereAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070687_10029752613300005343Switchgrass RhizospherePVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070671_10014789213300005355Switchgrass RhizosphereVEVPIGYQPVSSPLGFRIDLGYSRFNGREAGTNGLLAQPDDPNIWSATANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVAGASLFVESRYTTAYTQGQETRWVPVVIGLKWH*
Ga0070713_10130707613300005436Corn, Switchgrass And Miscanthus RhizosphereATANLTLDLVKFGQARRGALYLVGGGGVYRFTNFYDTNRSSSDFTSAFEGTPTTKGGVTGGAGLAMPIGGTSLFVESRYTTAHTQGEETRWVPVVIGLKWR*
Ga0070711_10142914023300005439Corn, Switchgrass And Miscanthus RhizosphereFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLLAQPVDPNIWSATANLTLDLVKFGQARRGALYLVGGGGVYRFTNFYDTNRSSSDFTSAFEGTPTTKGGVTGGAGLAMPIGGTSLFVESRYTTAHTQGEETRWVPVVIGLKWR*
Ga0070700_10011641233300005441Corn, Switchgrass And Miscanthus RhizosphereDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0068867_10124269123300005459Miscanthus RhizosphereGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWH*
Ga0070685_1007298813300005466Switchgrass RhizosphereTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070699_10002743013300005518Corn, Switchgrass And Miscanthus RhizosphereDPNIWSATGNLTLDLLKFGESRRGALYLVGGGGLYRFTNFFSGDRSDNEVQSAFEGKPVTKGGLTGGAGLAFPIGGASLFVESRYTNAYTKGEETRWVPIIFGLKWR*
Ga0070684_10162495023300005535Corn RhizosphereDPNIWSATANLTLDLLKFGESRRGSLYLVGGGGLFRFTDFYNSDASDNDVTSAFQGSPVTKGGVTGGAGLAFPIGGTSLFVETRYTTAYTEGNNTRWVPVVFGLKWR*
Ga0070704_10089689923300005549Corn, Switchgrass And Miscanthus RhizosphereGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0068852_10111136813300005616Corn RhizosphereLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0068859_10146051523300005617Switchgrass RhizosphereVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0068864_10039267623300005618Switchgrass RhizosphereWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0068864_10236796313300005618Switchgrass RhizosphereGWQSQNSILGFRIDLGYSRFNGREAGTSGLSSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0068866_1027864223300005718Miscanthus RhizosphereTANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWH*
Ga0068861_10009755743300005719Switchgrass RhizosphereFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0068862_10069320523300005844Switchgrass RhizosphereGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0082029_138417013300006169Termite NestNGLSAQPDDPNTWSATANLTLDLMRFGAEKRGALYLVGGGGVFRFTDFFNTDRSDNDVESAFEGSPVTKGGLTGGAGLALPIGSTSLFVESRYTTAYTEGEQTRWVPVVIGFKWR*
Ga0097621_10131085613300006237Miscanthus RhizosphereQPVDPNIWSATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVIIGLKWR*
Ga0075433_1007921543300006852Populus RhizosphereAQPDDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGKASLFVESRYTTAYTEGEETRWIPVVIGLKWR*
Ga0079217_1016457323300006876Agricultural SoilDDPNIWSATANATLDLIRWGENRRGSLYLVGGGGVFRFTDFYNFDRSDNENDSAFEGEPVTKGGLTGGAGLAFPIGGTSFFVESRYTTAYTEGENTKWVPIVIGLKWR*
Ga0068865_10140728323300006881Miscanthus RhizosphereLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0075419_1014103013300006969Populus RhizospherePNIWSATANLTLDLMKFGAERRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGKASLFVESRYTTAYTEGEETRWIPVVIGLKWR*
Ga0079218_1014204933300007004Agricultural SoilSYSRLNGRDDLGAAVQPDDPNIWSATANATLDLFRFGDSQRGALYLVGGGGVFRFTDFFNTDRSDNEPESAFEGDPVTKAGLTGGAGLAFPIGGASLFVESRYTNAFTDGENTRWVPVVIGLKWR*
Ga0079218_1101777213300007004Agricultural SoilQPDDPNIWSATANATLDLIRWGENRRGSLYLVAGGGVFRFTDFYNFDRSDNENDSAFEGEPVTKGGLTGGAGLAFPIGGTSFFVESRYTTAYTEGENTKWVPIVIGLKWR*
Ga0105240_1107166923300009093Corn RhizosphereLGFRIDVGYSRFNGRVAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105245_1038148113300009098Miscanthus RhizospherePNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105243_1073407323300009148Miscanthus RhizosphereGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105241_1140231023300009174Corn RhizosphereEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105248_1105634013300009177Switchgrass RhizosphereGLLTQPVDPNIWSATANLTFDLVNFGQERRGSVYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGMPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105249_1217619013300009553Switchgrass RhizosphereRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0126305_1035841023300010036Serpentine SoilWQSQNSILGFRIDLGYSRFNGREAGTNGLTSQPDDPSIWSGAANLTLDLLRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNDATSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTQGDDTRWVPIVVGLKWR*
Ga0126304_1015979013300010037Serpentine SoilNIWSATANATLDLLRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFQGDPVTKAGLTGGAGLAFPIGGSSLFVESRYTSAYTEGENTKWVPVVIGLKWR*
Ga0126311_1171704723300010045Serpentine SoilDDPNIWSATANATLDLLRFGESRRGALYLVGGGGAFRFTDFYNFDRSDNDPESAFQGDPVTKAGLTGGAGLAFPIGGSSLFVESRYTSAYTEGENTKWVPVVIGLKWR*
Ga0126383_1050108523300010398Tropical Forest SoilMDLGYSRFNGRDAGTNGLLAQPVDPNIWSATANLTLDLMKFGQERRGALYLVGGGGVYRFTNFYDTNRNSNDFTSAFEGTPTTKGGVTGGAGLSLPIGGSSLFVESRYTTAYTQGEETRWVPVIIGLKWR*
Ga0134121_1129198923300010401Terrestrial SoilFQPDDPNIWSGTANLTLDVIRWGESRRGALYLVGGGGVYRFTNFFSGDRNDNEVQSAFQGKPTTRGGVTGGAGLSVPVGGASLFVESRYTNAYTQGEETKWIPVIVGLKWR*
Ga0126317_1027730513300011332SoilLGFRIDLGYSRFNGREAGTNGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGLYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0150985_10881468823300012212Avena Fatua RhizosphereTNGLTSQPDDPSIWSGTANLTLDLARWGENRRGSLYLVGGGGAYRFTDFFNSDRSDNDLTSPFTGDPVTKAGLTGGAGLAFPIGGSSVFVESRYTNVYTEGDDTRWVPIVLGLKWR*
Ga0150985_11349050913300012212Avena Fatua RhizosphereLGFRIDLGYSRFNGREAGTNGLTSQPDDPSIWSGTANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNDLTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPIVVGLKWR*
Ga0150985_11387109613300012212Avena Fatua RhizosphereGVYRFTNFFSGNSTGQDLGDVVQSAFEGSPVTKGGLTGGAGLSFPIGGASLFVESRYTTVYTQGDNTRWVPVIVGFKFR*
Ga0150984_10426809313300012469Avena Fatua RhizosphereDLLKYGESRRGALYLVGGGGVYRFTNFFSGNSTGTNATDVVQSAFEGSPVTKGGLTGGAGLSFPIGGSSLFVESRYTTVYTQGDNTRWVPVIVGLKWR*
Ga0157330_100294223300012514SoilGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0164303_1122636413300012957SoilMKFGQERRGALYLVGGGGVFRFTDFMSTDRSATDVSSAFQGSPVTKGGLTGGAGLSLPVGGASLIVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0164302_1031313523300012961SoilPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQERRGALYLVGGGGVFRFTDFMSTDRSDNDVSSAFQGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0164305_1095669523300012989SoilGYSRFNGREAGTNGLTAQPDDPNIWSATANLTLDLMRFGAERRGAFYLVGGGGVFRFTDFFNTDRSDNDVASAFQGSPVTKAGLTGGAGLAFPIGSTSLFVESRYTTAYTEGEQTRWVPVVVGLKWR*
Ga0157370_1101192713300013104Corn RhizosphereQVPIGYQPVSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0163162_1012319043300013306Switchgrass RhizosphereDLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0157372_1165177523300013307Corn RhizosphereDDPNIWSATANLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0157375_1038990413300013308Miscanthus RhizosphereSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0157375_1042470913300013308Miscanthus RhizosphereGFRIDLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPIVVGLKWR*
Ga0163163_1072150213300014325Switchgrass RhizosphereSILGFRIDLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0182007_1004140633300015262RhizosphereAGTNGLLTQPVDPNIWSATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0132258_1346591613300015371Arabidopsis RhizosphereWQPASSPLGFRVDLGYSRLNGRSAGTNGLTSQLDDPSIWSATANLTLDLLKFGENRRGSLYLVGGGGVFRFTDFNNSDASDNNATSAFEGSPVTKGGITGGAGLAFPIGGTSLFVESRYTTAYTQGDNVRWVPVVFGLKWR*
Ga0132256_10209815213300015372Arabidopsis RhizosphereIRFGESKRGALYLVGGGGVYRFTNFFSGDRNDNEVQSAFQGKPTTRGGVTGGAGLAVPIGGASVFAESRYTNAYTQGEETKWIPIVFGLKWR*
Ga0132257_10036520133300015373Arabidopsis RhizosphereGYQPLSSPLGFRVDLGYSRFNGRDAGTNGLTAQPNDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVFRFTDFYNTDRSDNSVSSAFEGSPVTKGGLRGGAGLALPIGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0132257_10366301113300015373Arabidopsis RhizosphereLGYSRLNGRSAGTNGLTSQLDDPSIWSATANLTLDLLKFGENRRGSLYLVGGGGVFRFTDFNNSDASDNNATSAFEGSPVTKGGITGGAGLAFPIGGTSLFVESRYTTAYTQGDNVRWVPVVFGLKWR*
Ga0132255_10017021713300015374Arabidopsis RhizosphereKTGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0132255_10381788813300015374Arabidopsis RhizosphereDLGYSRFNGRDAGTNGLTAQPNDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVFRFTDFYNTDRSDNSVSSAFEGSPVTKGGLTGGAGLALPIGAASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0132255_10631927513300015374Arabidopsis RhizosphereQPDDPNIWSATANLTLDLMRFGAEKRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLAFPIGGASLFLESRYTTAYTEGEQTRWVPVVIGFKWR*
Ga0190274_1091690623300018476SoilDLGYSRFNGRSAGENGLSSQPDDPNIWSATMNATLDLLRFGENRRGALYLVGGGGVFRFTDFNNFDSSDNEPESSLKGEPVTKAGLTGGAGLAFPIGGTSLFVESRYTNAYTDGDNVKWVPVVIGFKWR
Ga0197907_1065920913300020069Corn, Switchgrass And Miscanthus RhizosphereVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0206356_1032732813300020070Corn, Switchgrass And Miscanthus RhizosphereVSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0126371_1327695923300021560Tropical Forest SoilYKTGFNVEVPIGYQPATSPLGFRVDLGYSRFNGRPAGTNGLLAQPNDPNIWSATANLTLDLVKFGQERRGSLYLVGGGGLYRFTNFYDTNRSSDDFTSAFDGTPTTKGGVTGGAGLALPIGGSSLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207653_1027430413300025885Corn, Switchgrass And Miscanthus RhizosphereEVPIGYQPLSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207642_1002840813300025899Miscanthus RhizosphereGREAGTNGLLSQPDDPNIWSATANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKW
Ga0207705_1125576613300025909Corn RhizosphereDLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0207654_1056620313300025911Corn RhizosphereEVPIGYQPVSGPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207707_1125706513300025912Corn RhizosphereRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0207657_1003523513300025919Corn RhizosphereNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207644_1079831513300025931Switchgrass RhizosphereVEVPIGYQPVSSPLGFRIDLGYSRFNGREAGTNGLLAQPDDPNIWSATANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVAGASLFVESRYTTAYTQGQETRWVPVVIGLKWH
Ga0207690_1113413313300025932Corn RhizosphereLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0207690_1178626413300025932Corn RhizosphereDFYKTGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207706_1053202513300025933Corn RhizosphereTNGLLAQPDDPNIWSATANLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207661_1198772823300025944Corn RhizosphereNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0207651_1209319313300025960Switchgrass RhizosphereYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0207640_1144774213300025981Corn RhizosphereATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207658_1023300413300025986Switchgrass RhizosphereMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207639_1196584713300026041Corn RhizosphereIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0207708_1015430213300026075Corn, Switchgrass And Miscanthus RhizosphereENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0207702_1174645313300026078Corn RhizosphereDPNIWSATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207676_1040386713300026095Switchgrass RhizospherePNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0207698_1153188923300026142Corn RhizosphereLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0209818_107704013300027637Agricultural SoilSAQPDDPNIWSATANATLDLIRWGENRRGSLYLVGGGGVFRFTDFYNFDRSDNENDSAFEGEPVTKGGLTGGAGLAFPIGGTSFFVESRYTTAYTEGENTKWVPIVIGLKWR
Ga0209814_1020254013300027873Populus RhizosphereGLTAQPDDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGKASLFVESRYTNAFTEGENTRWVPVVIGLKWR
Ga0209486_1008204133300027886Agricultural SoilSYSRLNGRDDLGAAVQPDDPNIWSATANATLDLFRFGDSQRGALYLVGGGGVFRFTDFFNTDRSDNEPESAFEGDPVTKAGLTGGAGLAFPIGGASLFVESRYTNAFTDGENTRWVPVVIGLKWR
Ga0209486_1106974813300027886Agricultural SoilQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFIESRYTTAYTEGENTKWVPVVIGLKWR
Ga0209382_1023435233300027909Populus RhizosphereGRSPSETGLSAQPDDPNIWSATANATLDLIRWGESRRGALYLVGGGGLFRFTDFYNFDRSDNDPESAFEGDPVTKAGLTGGAGLAFPIGGTSFFVESRYTTADTEGTNTKWVPIVIGLKW
Ga0209382_1163085323300027909Populus RhizosphereGGLQPDDPSIWSATANATLDLIRFGESRRGALYLVGGGGVYRFTDFYNTDRSDNDPESAFEGNPVTKAGLTGGAGLSFPIGGTSLFVESRYTNAFTEGENTRWVPVVIGLKWR
Ga0209382_1175421523300027909Populus RhizosphereYKTGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0268266_1064450723300028379Switchgrass RhizosphereKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0247821_1072821623300028596SoilLDLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0314816_105381423300031481SoilGAQPDDPNIWSATANATLDLIRWGESRRGALYLVGGGGFFRFTDFYNFDRSDNDPESAFKGDPVTKGGLTGGAGLAFPIGRTSFFVESRYTTVDTEGTNTKWVPVVIGLKWR
Ga0314825_11014723300031490SoilWQPIGSPFGLRLDLAYARLNGREASETGLGAQPDDPNIWSATANATLDLVRWGESRRGALYLVGGGGFFRFTDFYNFDRSDNDPESAFEGDPVTKGGLTGGAGLAFPIGRTSFFVESRYTTVDTEGTNTKWVPVVIGLKWR
Ga0310888_1010936533300031538SoilGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKW
Ga0307405_1127772123300031731RhizosphereLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFVESRYTTAYTEGENTKWVPVIVGLKWR
Ga0307413_1064209713300031824RhizosphereNGRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFVESRYTTAYTEGENTKWVPVVIGLKWR
Ga0310907_1084699813300031847SoilPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0310904_1074724023300031854SoilWQPMNSPFGLRLDLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0310885_1025490123300031943SoilNLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0310884_1083624613300031944SoilPNIWSGTANATLDLVRFGENKRGALYLVGGGGVYRFTDFFNTDRSDNDPESSLEGKPVTKGGVTGGGGLAFPIGRSSLFVESRYTTAFTEGENTKWIPVVIGLKWR
Ga0307409_10025219313300031995RhizosphereSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFVESRYTTAYTEGENTKWVPVVIGLKWR
Ga0247830_1048836623300033551SoilLNGRSPSETGLSAQPDDPNIWSATANATLDLIRWGESRRGALYLVGGGGLFRFTDFYNFDRSDNDPESAFEGDPVTKAGLTGGAGLAFPIGGTSFFVESRYTTADTEGTNTKWVPIVIGLKWR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.