Metagenome / Metatranscriptome Family F080447

Overview

Basic Information

• Family ID: F080447
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 115
• Average Sequence Length: 40 residues
• Representative Sequence: VLFIIALTYMFSGVFWRLQWIFRRKRNPPPPPYKEASQTS
• Number of Associated Samples: 107
• Number of Associated Scaffolds: 115

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.87 %
• % of genes near scaffold ends (potentially truncated): 99.13 %
• % of genes from short scaffolds (< 2000 bps): 86.96 %
• Associated GOLD sequencing projects: 105
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (100.000 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (6.957 % of family members)
• Environment Ontology (ENVO): Unclassified (20.870 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (52.174 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 36.76%
  β-sheet: 0.00%
  Coil/Unstructured: 63.24%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01118	Semialdhyde_dh	54.78
PF02774	Semialdhyde_dhC	33.04
PF06144	DNA_pol3_delta	4.35
PF04390	LptE	4.35
PF02367	TsaE	0.87
PF01649	Ribosomal_S20p	0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	33.04
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	33.04
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	4.35
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	4.35
COG2980	Outer membrane lipoprotein LptE/RlpB (LPS assembly)	Cell wall/membrane/envelope biogenesis [M]	4.35
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	0.87
COG0802	tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE	Translation, ribosomal structure and biogenesis [J]	0.87

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	98.26 %
Unclassified	root	N/A	0.00 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.61 %
Unclassified	root	N/A	0.00 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.43 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.61 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.87 %
Unclassified	root	N/A	0.00 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.43 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.61 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.87 %
Unclassified	root	N/A	0.00 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.43 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	13.91 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.87 %
Unclassified	root	N/A	0.00 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.43 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.70 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.87 %
Unclassified	root	N/A	0.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459024|GZRSKLJ01BDJM6	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	502
3300001084|JGI12648J13191_1034234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505
3300004092|Ga0062389_104701210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	514
3300004153|Ga0063455_100877175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632
3300005187|Ga0066675_10684298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771
3300005434|Ga0070709_10389466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038
3300005439|Ga0070711_100382764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138
3300005439|Ga0070711_101905962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	522
3300005542|Ga0070732_10126390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1516
3300005542|Ga0070732_10260090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040
3300005566|Ga0066693_10258604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	690
3300005587|Ga0066654_10354456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797
3300005591|Ga0070761_10959042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	542
3300005903|Ga0075279_10055844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666
3300005921|Ga0070766_10042575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2523
3300005938|Ga0066795_10085735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935
3300006028|Ga0070717_12050517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515
3300006031|Ga0066651_10827666	All Organisms → cellular organisms → Bacteria → Acidobacteria	503
3300006050|Ga0075028_100194909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091
3300006172|Ga0075018_10398082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700
3300006173|Ga0070716_100890068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696
3300006173|Ga0070716_100914027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688
3300006174|Ga0075014_100259788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900
3300006354|Ga0075021_10079663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1925
3300006755|Ga0079222_10668083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813
3300006804|Ga0079221_11650272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521
3300006881|Ga0068865_101739875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562
3300006914|Ga0075436_100843473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684
3300009551|Ga0105238_11937329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622
3300009759|Ga0116101_1071349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774
3300010046|Ga0126384_11557403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621
3300010048|Ga0126373_11353682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778
3300010303|Ga0134082_10284294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690
3300010329|Ga0134111_10276492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695
3300010361|Ga0126378_10036822	All Organisms → cellular organisms → Bacteria	4445
3300010376|Ga0126381_103886978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583
3300010379|Ga0136449_100716347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1674
3300011119|Ga0105246_12092564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548
3300011269|Ga0137392_10077104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2580
3300011269|Ga0137392_11035363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674
3300012096|Ga0137389_10907116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756
3300012212|Ga0150985_107291336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514
3300012212|Ga0150985_108540864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780
3300012354|Ga0137366_11052666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563
3300012918|Ga0137396_10233373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356
3300012960|Ga0164301_11492314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556
3300012971|Ga0126369_11694964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721
3300012987|Ga0164307_10989756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683
3300013297|Ga0157378_10552734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157
3300014654|Ga0181525_10331800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832
3300014657|Ga0181522_10061195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2132
3300014658|Ga0181519_10318376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965
3300015262|Ga0182007_10138814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821
3300015372|Ga0132256_103636282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518
3300016341|Ga0182035_11985317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528
3300016357|Ga0182032_11106508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680
3300016404|Ga0182037_10160315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1706
3300017929|Ga0187849_1315546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582
3300017933|Ga0187801_10003137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5099
3300017936|Ga0187821_10274408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664
3300018038|Ga0187855_10677512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601
3300018085|Ga0187772_10845519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663
3300018088|Ga0187771_10303225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1338
3300020579|Ga0210407_10439989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020
3300020580|Ga0210403_11327013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548
3300021180|Ga0210396_10588878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968
3300021180|Ga0210396_10964829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724
3300021401|Ga0210393_10857882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738
3300021420|Ga0210394_11401627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594
3300021433|Ga0210391_10187357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1628
3300022724|Ga0242665_10149573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736
3300024271|Ga0224564_1137282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504
3300026075|Ga0207708_10671673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883
3300026294|Ga0209839_10085309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093
3300026324|Ga0209470_1251708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708
3300026548|Ga0209161_10206799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077
3300026548|Ga0209161_10548655	All Organisms → cellular organisms → Bacteria → Acidobacteria	515
3300027080|Ga0208237_1052770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604
3300027570|Ga0208043_1107447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751
3300027692|Ga0209530_1008103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3344
3300027853|Ga0209274_10016127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3377
3300027862|Ga0209701_10296665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930
3300027874|Ga0209465_10013000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3738
3300027879|Ga0209169_10662368	All Organisms → cellular organisms → Bacteria → Acidobacteria	543
3300027884|Ga0209275_10130363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316
3300028560|Ga0302144_10280013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540
3300028773|Ga0302234_10217586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825
3300028863|Ga0302218_10148887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741
3300029954|Ga0311331_11202310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639
3300030000|Ga0311337_10891194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774
3300030045|Ga0302282_1103044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178
3300030057|Ga0302176_10324645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619
3300030490|Ga0302184_10430224	All Organisms → cellular organisms → Bacteria → Acidobacteria	509
3300030618|Ga0311354_10032074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6310
3300030646|Ga0302316_10173390	All Organisms → cellular organisms → Bacteria	891
3300030706|Ga0310039_10027189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2687
3300030759|Ga0265745_1019948	All Organisms → cellular organisms → Bacteria → Acidobacteria	580
3300030814|Ga0265741_100381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2246
3300031708|Ga0310686_118979923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813
3300031716|Ga0310813_10202974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1627
3300031718|Ga0307474_10286910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266
3300031753|Ga0307477_10423316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910
3300031820|Ga0307473_11306269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543
3300031823|Ga0307478_10034348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3680
3300031890|Ga0306925_10359194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1564
3300032160|Ga0311301_10847974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243
3300032174|Ga0307470_10384394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986
3300032205|Ga0307472_101253062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711
3300032829|Ga0335070_10094541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3143
3300032829|Ga0335070_12078114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510
3300032893|Ga0335069_10069815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4524
3300033004|Ga0335084_10526538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213
3300033134|Ga0335073_10210065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2406
3300033433|Ga0326726_12297929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524
3300033829|Ga0334854_015881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1822

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.17%
Host-Associated	Host-Associated	7.83%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.87%
Aquatic	Environmental → Aquatic	11.30%
Plants	Host-Associated → Plants	7.83%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.43%
Peat	Environmental → Terrestrial → Peat	10.43%
Freshwater	Environmental → Aquatic → Freshwater	7.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.22%
Sediment	Environmental → Aquatic → Sediment	3.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.96%
Loam	Environmental → Terrestrial → Soil → Loam	14.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.22%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.74%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.87%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.87%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental
3300029954	I_Bog_N3 coassembly	Environmental
3300030000	I_Fen_N3 coassembly	Environmental
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental
3300030618	II_Palsa_E3 coassembly	Environmental
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_08852120	2170459024	Grass Soil	SKPVLFVIALTYMFSGIFWRLHWFFRRNRNTPPPTYKEASQTS
JGI12648J13191_10342341	3300001084	Forest Soil	ALSYMFSGVFWRLQWIFRRKRNPSPPQYKEASQTS*
Ga0062389_1047012102	3300004092	Bog Forest Soil	FSQWVLFVIALTYMFSGVFWRLQWIFRRKRNPPPPQYKEASQTS*
Ga0063455_1008771752	3300004153	Soil	SRNVLFAIALLYMVSGVFWRLQWIFRRRSGPAPPYNEASQAS*
Ga0066675_106842981	3300005187	Soil	WVLFAIALLYMFSGVVWRLQWIFRRKGGPPSPPAYKEASQTS*
Ga0070709_103894662	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LFFIALLYTISGVFWRVQWIFRRKSDPPPPTYKEASQTS*
Ga0070711_1003827642	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FSQQMLFALALLYMASGVFWRLQWIFRRRETPPPAAYKEASQT*
Ga0070711_1019059622	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WVLFLIALLYLFSGVFWRLKWIFRRKGNPPPPPAYTEASQPS*
Ga0070732_101263903	3300005542	Surface Soil	WHRPLLFGIALLYMFSGVWWRLQWLFRRRPSPPAPPVYKEASHTA*
Ga0070732_102600902	3300005542	Surface Soil	ALLYMVSGIFWRLQWIFRRRGRRPPPPYKEASQAS*
Ga0066693_102586043	3300005566	Soil	ALALLYMASGVFWRLQWIFRRRETPPPAAYKEASQT*
Ga0066654_103544562	3300005587	Soil	QQVLFAVALLYMVSGVFWRVQWIFRRRSGPPPPPFQEASHA*
Ga0070761_109590421	3300005591	Soil	LFVIALSYMFSGVFWRLQWIFRRKRNPPPPQYKEASQIS*
Ga0075279_100558442	3300005903	Rice Paddy Soil	EPLLFSIALLYMASGIFWRLQWIFRRKGSPPAPPSYREASQTS*
Ga0070766_100425751	3300005921	Soil	FSGPALFALALLYTFSGVFWRLQWMFRRKSTPPPPPYHEASQTS*
Ga0066795_100857352	3300005938	Soil	PALFAIAILYMASGVLWRLQWIFRRKTPPAPPPYREASPTP*
Ga0070717_120505172	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ASEWVLFLIAIFYMFSGILWRLQWLFRRKGNPPPPPAYKEASQPS*
Ga0066651_108276661	3300006031	Soil	RKVLFGIALLYMVSGVFWRLQWIFRRRSGPPPPSYKEASQAS*
Ga0075028_1001949092	3300006050	Watersheds	LYMFSGVLWRLQWIFRRKRNPPPPPAYKEISQTS*
Ga0075018_103980821	3300006172	Watersheds	VIALLYMFSGVLWRLQWIFRRKRNPPPPPAYKEISQTS*
Ga0070716_1008900681	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLFALALLYMASGVFWRLQWIFRRRETPPPAAYKEASQT*
Ga0070716_1009140272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LFALSLLYMASGVFWRLQWLFRRKGSPPPPPYQEASQIS*
Ga0075014_1002597881	3300006174	Watersheds	LYVLSGVFWRLKWIFRRKGSSPPPPAYTEASQTS*
Ga0075021_100796634	3300006354	Watersheds	LFAIAVLYMASGVLWRLQWIIRRKNPPAPPPYREASQTS*
Ga0079222_106680831	3300006755	Agricultural Soil	QMLFALALLYMASGVFWRLQWIFRRRETPPPAAYNEASQT*
Ga0079221_116502722	3300006804	Agricultural Soil	FVIALTYMLSGIFWRLHWLFRRKRNPPPPPYTEASQTS*
Ga0068865_1017398751	3300006881	Miscanthus Rhizosphere	PIVLFAIALLYTFSGVFWRLKWLLRRKNNPPPPNYKEASQTS*
Ga0075436_1008434731	3300006914	Populus Rhizosphere	LFAIALLYMASGVFWRLQWIFRRRSGPPPPSYKEASQAS*
Ga0105238_119373292	3300009551	Corn Rhizosphere	PLLFVLALTYMFSGVFWRLQWILRRKGPPSPPAYKEASQIS*
Ga0116101_10713492	3300009759	Peatland	IALLYMISGVFWRLQWIFRRRPDPPPPSYKEVSQAS*
Ga0126384_115574032	3300010046	Tropical Forest Soil	VLFAIALLYTFSGVLWRLQWLFRRRGGPPTPPAYREASQTS*
Ga0126373_113536822	3300010048	Tropical Forest Soil	LFAIALLYMASGVFWRLQWIFRRRSDPPPPSYKEASQAS*
Ga0134082_102842942	3300010303	Grasslands Soil	VLFAIALLYMFSGVVWRLQWIFRRKGGPPSPPAYKEASQTS*
Ga0134111_102764921	3300010329	Grasslands Soil	RYVLFAIALLYMFSGVFWRLTWIFRRRNPPPPAYKEASLPS*
Ga0126378_100368227	3300010361	Tropical Forest Soil	QVLFVIALTYMFSGVFWRLHWIFRRHRNPPPPPYREATEVS*
Ga0126381_1038869781	3300010376	Tropical Forest Soil	LFVIALTYMFSGIFWRLHWTFRRRGNEPPPPYTQASPVS*
Ga0136449_1007163471	3300010379	Peatlands Soil	RQVLFFIALFYMISGVFWRVQWIFRRHHDPPPPPYKEASPAS*
Ga0105246_120925642	3300011119	Miscanthus Rhizosphere	IALLYMVSGVFWRLQWIFRRRSGPPPPSYKEAPHAS*
Ga0137392_100771044	3300011269	Vadose Zone Soil	LLFSIALLYMFSGVFWRLQWIFRRRNQPPPPSYKEASQVS*
Ga0137392_110353632	3300011269	Vadose Zone Soil	VALLYMVSGVFWRLQWIFRRRRGPPPPSYKEASQAS*
Ga0137389_109071162	3300012096	Vadose Zone Soil	YYSGPALFVIAILYMASGVLWRLQWIFHRKSPPAPPAYREASQTP*
Ga0150985_1072913362	3300012212	Avena Fatua Rhizosphere	FALALLYMASGVFWRLQWIFRRRETPPAYTEASRAQ*
Ga0150985_1085408642	3300012212	Avena Fatua Rhizosphere	LFVLALTYMFSGVFWRLQWILRRKGPPSPPAYKEASQIS*
Ga0137366_110526662	3300012354	Vadose Zone Soil	GPLLFAIALLYMFSGVFWRLQWVFRRRSNPPPPPAYKEASQTS*
Ga0137396_102333732	3300012918	Vadose Zone Soil	GIALIYMFSGVLWRLQWIIRRRPRPPIPPAYEEASQPS*
Ga0164301_114923142	3300012960	Soil	FAIALIYMFSGVLWRLQWIIRRKPSPPAPPAYKEASQPS*
Ga0126369_116949641	3300012971	Tropical Forest Soil	LIYMFSGVWWRLQWIVRRKPSPPAPPAYKEASQPS*
Ga0164307_109897561	3300012987	Soil	RRVLFGLALLYMVSGVFWRLQWIFRRRSGPPPPSYKEAPHAS*
Ga0157378_105527342	3300013297	Miscanthus Rhizosphere	VLFLIALLYVFSGVFWRLKWIFRRKSDPPPPPTYTEAPQAS*
Ga0181525_103318001	3300014654	Bog	ALFALALFYTFSGVFWRLQWMFRRKSTPPPPPYHEASQTS*
Ga0181522_100611951	3300014657	Bog	LFAIAIVYMASGVLWRLQWIFRRKSPPAPPAYREASQTP*
Ga0181519_103183762	3300014658	Bog	VLFIVALTYMFSGVLMRLGYVFRRRSGPPPPPSYTEASDLP*
Ga0182007_101388141	3300015262	Rhizosphere	LFGIALLYMVSGVFWRLQWIFRRRSGPPPPSYKEAPRAS*
Ga0132256_1036362821	3300015372	Arabidopsis Rhizosphere	ALIYMFSGVLWRLQWIIRRRPQPPAPPVYKEASQPS*
Ga0182035_119853171	3300016341	Soil	LALLYMTSGVFWRLQWIFRRRSGPPPPPYKEASQTS
Ga0182032_111065082	3300016357	Soil	VLFALALLYMVSGVFWRLQWIFRHRPGPPPPTYKEASQIS
Ga0182037_101603151	3300016404	Soil	QRVLFAVALLYMFSGVLWRLQWIIRRRPSPPSPPAPAYKEASQPS
Ga0187849_13155462	3300017929	Peatland	SRQILFAIAVLYMASGVLWRLQWIFHRKAPPAPPVNREASQNP
Ga0187801_100031377	3300017933	Freshwater Sediment	VLFIIALTYMFSGVFWRLQWIFRRKRNPPPPPYKEASQTS
Ga0187821_102744082	3300017936	Freshwater Sediment	ALLYTVSGVFWRLQWIFRRRSGPTPPSYKEAPQAR
Ga0187855_106775122	3300018038	Peatland	ALFALALFYTFSGVFWRLQWMFRPKSTPPPPPYHEASQTS
Ga0187772_108455191	3300018085	Tropical Peatland	RPMLFGIALLYMVSGVFWRLQWIFRKRTNPPPPPHFKEVSQAS
Ga0187771_103032251	3300018088	Tropical Peatland	RLLLFVIELAYMASGVLWRLQWIFRKKGNPPPPPYTEARQTS
Ga0210407_104399891	3300020579	Soil	FFSRQLLFVLALTYMASGVIWRLQWLFRRRSDPPPPAPTYKEASQPS
Ga0210403_113270131	3300020580	Soil	FFSKPALFGVALLYTFSGVFWRLQWMFRRRNQPPPPTYTEASQTS
Ga0210396_105888781	3300021180	Soil	LFGVALLYTFSGVFWRLQWIFRRRNQPPPPPYKEASQIS
Ga0210396_109648291	3300021180	Soil	LSIALLYMFSGVWWRLQWLFRRRPSPPAPPVYKEASHTA
Ga0210393_108578821	3300021401	Soil	FSRQMLFVIALFYMVSGVFWRVQWIFRRRNNPPPPPYKEASQAS
Ga0210394_114016272	3300021420	Soil	FMFHRKVLFGLALFYMISGIFWRVQWIFRRKTDLPPPPPYKEAPQA
Ga0210391_101873571	3300021433	Soil	RPTLFCVALLYMFSGVFWRLQWIFRRRGQTPPPTYKEASQTS
Ga0242665_101495731	3300022724	Soil	RWVLFAIAIIYMSSGVLWRLQWIIRRRPSPPAPPVYKEASQPS
Ga0224564_11372822	3300024271	Soil	WVLFVIALTYMLSGVFWRMQWIFRRKRNPPPPSYREASQTS
Ga0207708_106716731	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AIALLYTFSGVFWRLKWLLRRKNNPPPPNYKEASQTS
Ga0209839_100853092	3300026294	Soil	IALIYTVSGVFWRLQWMFRRKHNRPPPPYKEASQTS
Ga0209470_12517082	3300026324	Soil	IALLYMFSGVVWRLQWIFRRKGGPPSPPAYKEASQTS
Ga0209161_102067991	3300026548	Soil	VLFAIALLYMFSGVVWRLQWIFRRKGGPPSPPAYKEASQTS
Ga0209161_105486551	3300026548	Soil	LFSRLALFIIAIVYMASGVLWRLQWIFHRKTPPAPPAYREASHTP
Ga0208237_10527701	3300027080	Forest Soil	ALFGVALLYTFSGVFWRLQWMFRRRNQPPPPTYTEASQTS
Ga0208043_11074472	3300027570	Peatlands Soil	YLLFVLALTYMASGVVWRLLWIFRRKNTPPPSYKEASQTS
Ga0209530_10081031	3300027692	Forest Soil	AIAILYMASGVLWRLQWIFHRKTPPAPPPYREASQNP
Ga0209274_100161271	3300027853	Soil	ALLYTFSGVFWRLQWMFRRKSTPPPPPYHEASQTS
Ga0209701_102966651	3300027862	Vadose Zone Soil	GPVLFGVALLYTFSGVFWRLQWMFRRRNQPPPPTYKEASQTS
Ga0209465_100130006	3300027874	Tropical Forest Soil	AVALLYMVSGVFWRLQWIFRRRSDPPPPSYKEASQAS
Ga0209169_106623682	3300027879	Soil	LFAIAIVYMASGVLWRLQWIFRRKTPPAPPAYREASQTP
Ga0209275_101303633	3300027884	Soil	PALFGVALLYTFSGVFWRLQWIFRRRNQPPPPPYKEASQIS
Ga0302144_102800132	3300028560	Bog	GVAAFSGPVLFGIALLYMFSGVFWRLQWIFRRKNPPPPPYKEASQTS
Ga0302234_102175862	3300028773	Palsa	GPVLFGIALLYMFSGVFWRLQWIFRRKNPPPPPYKEASQTS
Ga0302218_101488871	3300028863	Palsa	SKPVLFGVALLYTFSGVFWRLQWIFRRRNQPPPPAYKEASQTS
Ga0311331_112023101	3300029954	Bog	LFAIALLYTFSGVFWRLQWMFRRRNQPPPPTYKEASQTS
Ga0311337_108911941	3300030000	Fen	IGYFSRPVLFAIAILYMASGVLWRLQWIFRRKNPPAPPAYREASQTS
Ga0302282_11030442	3300030045	Fen	AFSGPVLFGIALLYMFSGVFWRLQWIFRRKNPPPPPYKEASQTS
Ga0302176_103246451	3300030057	Palsa	LFAIALLYMFSGVFWRLQWIFRRRNQPPPPAYKEAPQTS
Ga0302184_104302242	3300030490	Palsa	SKPVLFGVALLYTFSGVFWRLQWMFRRRNQPPPPAYKEASQTS
Ga0311354_100320741	3300030618	Palsa	FSGPALFVIAILYMASGVLWRLQWIFHRKTSPPAPPVYHEASHTP
Ga0302316_101733902	3300030646	Palsa	FGVALLYTFSGVFWRLQWIFRRRNQPRPPTYKEVSQTS
Ga0310039_100271891	3300030706	Peatlands Soil	IALTYMLSGVFWRMQWIFRRKRNPPPPSYREASQTS
Ga0265745_10199482	3300030759	Soil	IFAFSGPALFALALLYTFSGVFWRLQWMFRRKSTPPPPPYHEASQTS
Ga0265741_1003814	3300030814	Soil	SGPALFALALFYTFSGVFWRLQWMFRRKSTPPPPPYHEASQTS
Ga0310686_1189799232	3300031708	Soil	FSGPALFALALFYTFSGVFWRLQWMFRRKSTPPTPPYHEASQTS
Ga0310813_102029741	3300031716	Soil	FSRRVLFAIALLYMVSGVFWRLQWIFRRRPGPPPPSYKEAPHTS
Ga0307474_102869101	3300031718	Hardwood Forest Soil	FGVALLYTFSGVFWRLQWMFRRRNQPPPPPFKEASQTS
Ga0307477_104233161	3300031753	Hardwood Forest Soil	FAVALLYMVSGVFWRVQWIFRRRSGPPPPPYKEASQAS
Ga0307473_113062692	3300031820	Hardwood Forest Soil	LFGMALLYMFSGVIWRLMWIFRRRGGTPPPTYKEASQIS
Ga0307478_100343481	3300031823	Hardwood Forest Soil	RKVLFAIALLYTISGVFWRVQWIFRRKTGPPQPPYKEASQAS
Ga0306925_103591943	3300031890	Soil	FAVALLYMFSGVLWRLQWIIRRRPSPPSPPAPAYKEASQPS
Ga0311301_108479741	3300032160	Peatlands Soil	FLIALLYMVSGLFWRLQWMFRRRNDPPPPPYKEASQTS
Ga0307470_103843941	3300032174	Hardwood Forest Soil	FSRKMLFAIALLYMVSGVFWRLQWIFRRRSGPPPPSYKEAPQAR
Ga0307472_1012530622	3300032205	Hardwood Forest Soil	SRFVLFGIALLYMFSGVFWRLQWIFRRRNNPPPPAFREASQTS
Ga0335070_100945411	3300032829	Soil	VLLFVIALAYMSSGVIWRLQWVFRRKGSNPPPPPFKEVSQTS
Ga0335070_120781141	3300032829	Soil	FSRYVLFGIALLYMFSGVLWRLQWIFRRRGNPPPPAYREASQPS
Ga0335069_100698151	3300032893	Soil	FSGPVLFAIAVLYMASGILWRLQWIFRRKAPPAPPPTHPASVTS
Ga0335084_105265382	3300033004	Soil	VFSGPVLFAIALLYMVSGVFWRLQWIFRRRSGPPPPSYKEAPHVS
Ga0335073_102100654	3300033134	Soil	ALLYMVSGVFWRLQWIFRKRSNPPPPPRYKEASQAS
Ga0326726_122979291	3300033433	Peat Soil	IALLYMFSGVLWRIQWIFRRKTNPPPPAYKEASQTS
Ga0334854_015881_1_117	3300033829	Soil	IFIALGYMLSGVFWRLQWVFRRKGTSPPSGYKEVSQTS