Basic Information | |
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Family ID | F080395 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 115 |
Average Sequence Length | 84 residues |
Representative Sequence | VTALFLAALALAPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDQAIVHFRLTRPARVSMDVVATNMVRAGKGGTSAVW |
Number of Associated Samples | 105 |
Number of Associated Scaffolds | 115 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 85.22 % |
% of genes near scaffold ends (potentially truncated) | 98.26 % |
% of genes from short scaffolds (< 2000 bps) | 88.70 % |
Associated GOLD sequencing projects | 100 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.58 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (97.391 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.739 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.304 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (57.391 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 8.26% β-sheet: 13.76% Coil/Unstructured: 77.98% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 115 Family Scaffolds |
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PF00486 | Trans_reg_C | 9.57 |
PF00072 | Response_reg | 7.83 |
PF02547 | Queuosine_synth | 2.61 |
PF01040 | UbiA | 1.74 |
PF02518 | HATPase_c | 1.74 |
PF02080 | TrkA_C | 0.87 |
PF00672 | HAMP | 0.87 |
PF00908 | dTDP_sugar_isom | 0.87 |
PF07549 | Sec_GG | 0.87 |
COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
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COG0809 | S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) | Translation, ribosomal structure and biogenesis [J] | 2.61 |
COG0341 | Preprotein translocase subunit SecF | Intracellular trafficking, secretion, and vesicular transport [U] | 0.87 |
COG0342 | Preprotein translocase subunit SecD | Intracellular trafficking, secretion, and vesicular transport [U] | 0.87 |
COG1898 | dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme | Cell wall/membrane/envelope biogenesis [M] | 0.87 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 97.39 % |
Unclassified | root | N/A | 2.61 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001305|C688J14111_10014421 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2285 | Open in IMG/M |
3300001305|C688J14111_10039967 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1410 | Open in IMG/M |
3300001686|C688J18823_10095512 | All Organisms → cellular organisms → Bacteria | 2064 | Open in IMG/M |
3300001686|C688J18823_10117012 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1849 | Open in IMG/M |
3300001686|C688J18823_10458238 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 820 | Open in IMG/M |
3300002568|C688J35102_118045218 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 525 | Open in IMG/M |
3300004081|Ga0063454_100470033 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 872 | Open in IMG/M |
3300004081|Ga0063454_100728381 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 753 | Open in IMG/M |
3300004114|Ga0062593_100829950 | All Organisms → cellular organisms → Bacteria | 924 | Open in IMG/M |
3300004153|Ga0063455_101041792 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 597 | Open in IMG/M |
3300004479|Ga0062595_100982570 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 723 | Open in IMG/M |
3300005093|Ga0062594_101742596 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 653 | Open in IMG/M |
3300005093|Ga0062594_102812796 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 541 | Open in IMG/M |
3300005162|Ga0066814_10069703 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 614 | Open in IMG/M |
3300005167|Ga0066672_10862364 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 564 | Open in IMG/M |
3300005332|Ga0066388_103366991 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 817 | Open in IMG/M |
3300005332|Ga0066388_104975674 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 675 | Open in IMG/M |
3300005334|Ga0068869_101441543 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 610 | Open in IMG/M |
3300005367|Ga0070667_101545916 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 623 | Open in IMG/M |
3300005451|Ga0066681_10486543 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 760 | Open in IMG/M |
3300005457|Ga0070662_100513732 | All Organisms → cellular organisms → Bacteria | 1000 | Open in IMG/M |
3300005458|Ga0070681_11995228 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 508 | Open in IMG/M |
3300005518|Ga0070699_101463175 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 626 | Open in IMG/M |
3300005526|Ga0073909_10363414 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 673 | Open in IMG/M |
3300005526|Ga0073909_10723226 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 501 | Open in IMG/M |
3300005543|Ga0070672_100148616 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1937 | Open in IMG/M |
3300005561|Ga0066699_10380424 | All Organisms → cellular organisms → Bacteria | 1010 | Open in IMG/M |
3300005713|Ga0066905_100923970 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 765 | Open in IMG/M |
3300006032|Ga0066696_10460885 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 833 | Open in IMG/M |
3300006034|Ga0066656_10252179 | All Organisms → cellular organisms → Bacteria | 1134 | Open in IMG/M |
3300006046|Ga0066652_100276476 | All Organisms → cellular organisms → Bacteria | 1481 | Open in IMG/M |
3300006173|Ga0070716_100812104 | All Organisms → cellular organisms → Bacteria | 725 | Open in IMG/M |
3300006175|Ga0070712_101920945 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 518 | Open in IMG/M |
3300006178|Ga0075367_10511402 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 762 | Open in IMG/M |
3300006572|Ga0074051_11419056 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 735 | Open in IMG/M |
3300006573|Ga0074055_10007051 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 768 | Open in IMG/M |
3300006578|Ga0074059_12033349 | All Organisms → cellular organisms → Bacteria | 771 | Open in IMG/M |
3300006579|Ga0074054_12133908 | All Organisms → cellular organisms → Bacteria | 514 | Open in IMG/M |
3300006605|Ga0074057_12124034 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 704 | Open in IMG/M |
3300006800|Ga0066660_11325136 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 563 | Open in IMG/M |
3300006806|Ga0079220_11870189 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 531 | Open in IMG/M |
3300006852|Ga0075433_11102493 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 690 | Open in IMG/M |
3300006881|Ga0068865_101607346 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 584 | Open in IMG/M |
3300006904|Ga0075424_102539744 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 536 | Open in IMG/M |
3300009101|Ga0105247_10508547 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 879 | Open in IMG/M |
3300009811|Ga0105084_1073047 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 625 | Open in IMG/M |
3300010029|Ga0105074_1045610 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 769 | Open in IMG/M |
3300010039|Ga0126309_10936775 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 577 | Open in IMG/M |
3300010323|Ga0134086_10396320 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 554 | Open in IMG/M |
3300010333|Ga0134080_10379667 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 650 | Open in IMG/M |
3300010400|Ga0134122_11429702 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 707 | Open in IMG/M |
3300011270|Ga0137391_10674665 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 861 | Open in IMG/M |
3300011994|Ga0120157_1044384 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 976 | Open in IMG/M |
3300012189|Ga0137388_11670975 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 571 | Open in IMG/M |
3300012198|Ga0137364_10449298 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 967 | Open in IMG/M |
3300012199|Ga0137383_10680352 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 752 | Open in IMG/M |
3300012208|Ga0137376_10037214 | All Organisms → cellular organisms → Bacteria | 3907 | Open in IMG/M |
3300012353|Ga0137367_10758325 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 674 | Open in IMG/M |
3300012354|Ga0137366_10756056 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 691 | Open in IMG/M |
3300012532|Ga0137373_10010839 | All Organisms → cellular organisms → Bacteria | 9495 | Open in IMG/M |
3300012922|Ga0137394_11335670 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 579 | Open in IMG/M |
3300012955|Ga0164298_10329770 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 958 | Open in IMG/M |
3300012957|Ga0164303_11114628 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 571 | Open in IMG/M |
3300012958|Ga0164299_10042176 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2074 | Open in IMG/M |
3300012958|Ga0164299_10883137 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 647 | Open in IMG/M |
3300012960|Ga0164301_10073678 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1861 | Open in IMG/M |
3300012989|Ga0164305_10965342 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 721 | Open in IMG/M |
3300013296|Ga0157374_10595851 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1115 | Open in IMG/M |
3300014058|Ga0120149_1099583 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 776 | Open in IMG/M |
3300014150|Ga0134081_10106939 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 886 | Open in IMG/M |
3300014325|Ga0163163_10518865 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1254 | Open in IMG/M |
3300014823|Ga0120170_1087325 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 641 | Open in IMG/M |
3300015358|Ga0134089_10483238 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 540 | Open in IMG/M |
3300015373|Ga0132257_100441056 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1589 | Open in IMG/M |
3300017654|Ga0134069_1288086 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 579 | Open in IMG/M |
3300017656|Ga0134112_10239148 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 718 | Open in IMG/M |
3300018028|Ga0184608_10218633 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 836 | Open in IMG/M |
3300018028|Ga0184608_10403600 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 593 | Open in IMG/M |
3300018051|Ga0184620_10140812 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 774 | Open in IMG/M |
3300018054|Ga0184621_10002546 | All Organisms → cellular organisms → Bacteria | 4676 | Open in IMG/M |
3300018066|Ga0184617_1137570 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 708 | Open in IMG/M |
3300018433|Ga0066667_10328653 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1204 | Open in IMG/M |
3300018482|Ga0066669_11610471 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 593 | Open in IMG/M |
3300019361|Ga0173482_10573870 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 562 | Open in IMG/M |
3300019869|Ga0193705_1065481 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 726 | Open in IMG/M |
3300019873|Ga0193700_1015905 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1235 | Open in IMG/M |
3300019877|Ga0193722_1074348 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 840 | Open in IMG/M |
3300020010|Ga0193749_1066956 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 674 | Open in IMG/M |
3300021344|Ga0193719_10236422 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 775 | Open in IMG/M |
3300023058|Ga0193714_1051357 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 592 | Open in IMG/M |
3300024288|Ga0179589_10014954 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2433 | Open in IMG/M |
3300025898|Ga0207692_10599396 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 708 | Open in IMG/M |
3300025901|Ga0207688_10042729 | Not Available | 2524 | Open in IMG/M |
3300025922|Ga0207646_10616477 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 973 | Open in IMG/M |
3300025933|Ga0207706_10380369 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1225 | Open in IMG/M |
3300025937|Ga0207669_11200245 | Not Available | 643 | Open in IMG/M |
3300026078|Ga0207702_11231607 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 742 | Open in IMG/M |
3300026121|Ga0207683_11130588 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 726 | Open in IMG/M |
3300026142|Ga0207698_10033173 | Not Available | 3749 | Open in IMG/M |
3300026300|Ga0209027_1251036 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 567 | Open in IMG/M |
3300026536|Ga0209058_1109165 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1383 | Open in IMG/M |
3300026538|Ga0209056_10447114 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 739 | Open in IMG/M |
3300026550|Ga0209474_10551964 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 586 | Open in IMG/M |
3300028711|Ga0307293_10000867 | All Organisms → cellular organisms → Bacteria | 7454 | Open in IMG/M |
3300028715|Ga0307313_10251395 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 550 | Open in IMG/M |
3300028715|Ga0307313_10264923 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 534 | Open in IMG/M |
3300028716|Ga0307311_10084367 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 876 | Open in IMG/M |
3300028717|Ga0307298_10000941 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 6560 | Open in IMG/M |
3300028744|Ga0307318_10321803 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 543 | Open in IMG/M |
3300028796|Ga0307287_10301028 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 606 | Open in IMG/M |
3300028819|Ga0307296_10002286 | All Organisms → cellular organisms → Bacteria | 9781 | Open in IMG/M |
3300028875|Ga0307289_10202783 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 816 | Open in IMG/M |
3300028884|Ga0307308_10007222 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 4837 | Open in IMG/M |
3300031421|Ga0308194_10071162 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 940 | Open in IMG/M |
3300031455|Ga0307505_10343666 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 704 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 21.74% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.70% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 8.70% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 7.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.22% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 5.22% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 4.35% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.35% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.48% |
Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 2.61% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.61% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.61% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.74% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.74% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.74% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.74% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.74% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.74% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.74% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.87% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.87% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.87% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.87% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.87% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.87% |
Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.87% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001305 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
3300001686 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005162 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB | Environmental | Open in IMG/M |
3300005167 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005561 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006178 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Host-Associated | Open in IMG/M |
3300006572 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006573 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006578 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006579 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006605 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
3300009811 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 | Environmental | Open in IMG/M |
3300010029 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20 | Environmental | Open in IMG/M |
3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
3300010323 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
3300011994 | Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M | Environmental | Open in IMG/M |
3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
3300012198 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300014058 | Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M | Environmental | Open in IMG/M |
3300014150 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014823 | Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M | Environmental | Open in IMG/M |
3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300017654 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300017656 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015 | Environmental | Open in IMG/M |
3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
3300018054 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1 | Environmental | Open in IMG/M |
3300018066 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1 | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
3300019873 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1 | Environmental | Open in IMG/M |
3300019877 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1 | Environmental | Open in IMG/M |
3300020010 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2 | Environmental | Open in IMG/M |
3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
3300023058 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1 | Environmental | Open in IMG/M |
3300024288 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal | Environmental | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026300 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
3300026538 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes) | Environmental | Open in IMG/M |
3300026550 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes) | Environmental | Open in IMG/M |
3300028711 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150 | Environmental | Open in IMG/M |
3300028715 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203 | Environmental | Open in IMG/M |
3300028716 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198 | Environmental | Open in IMG/M |
3300028717 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158 | Environmental | Open in IMG/M |
3300028744 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367 | Environmental | Open in IMG/M |
3300028796 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141 | Environmental | Open in IMG/M |
3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
3300028875 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143 | Environmental | Open in IMG/M |
3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031455 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
C688J14111_100144211 | 3300001305 | Soil | VTAVLLAALALTPALHDLRVTNGSAPFAGDRPLLTTVSPNGDGFRDRAIVHFRLTQPARVQLDVLATNMVRAGKGGTSVVWHTTRLFGTRPGT |
C688J14111_100399673 | 3300001305 | Soil | MTALLLAAVSAFAAPGPALLDLHVSNGSVPFAGDQPLLTTVSPNGDGFRDSATVRFRLTRPAQVRLEVVATNMVSAGKGGTTV |
C688J18823_100955125 | 3300001686 | Soil | VTALLLAVVSAFATPGPALVDLHVTNGSAPFAGDQPLLTTVSPNGDGFRDSATVRFRLTRPAQVRLEVVATNMVSAGKGGTTVVWRASGRFVPGPGSLTW |
C688J18823_101170124 | 3300001686 | Soil | VLLAALALAPQLQGLHVTNGSAPFAGDRPLLTTVSPNGDGFRDAATVHFRLSRPAVVRLDAVATNMIRAGKGGT |
C688J18823_104582382 | 3300001686 | Soil | VTALFLAALALTPALQDLHVTNGSTPFAGDNRLLTTVSPNGDGFRDSAVVHFRLTRPARVELDVVATNMVRAGEGGTSTVWRTSRLFGRGP |
C688J35102_1180452181 | 3300002568 | Soil | VTAVVLAALALASPALHGVHVTNGSAPFAGDRPLLTTVSPNGDGFRDRAIVHFVLTRSAKVDLDVLATNMVRAGKGG |
Ga0063454_1004700331 | 3300004081 | Soil | VTAVLLAALALAPQLQGLHVTNGSAPFAGDRPLLTTVSPNGDGFRDAATVHFRLSRPAVVRLDAVATNMIRAGKGGTSSVWHT |
Ga0063454_1007283811 | 3300004081 | Soil | MTALLLAAVSAFAAPGPALLDLHVSNGSVPFAGDQPLLTTVSPNGDGFRDSATVRFRLTRPAQVRLEVVATNMVSAGKGGT |
Ga0062593_1008299502 | 3300004114 | Soil | VTPLLLAALALAPALHDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDRAIVHFRLTQPARVQLDVVATNMVRAGKGGTSVVWHTSRFFAAGPGTLTWRP |
Ga0063455_1010417921 | 3300004153 | Soil | LTALFLAALALAPAVQGFHVTNGSVPFAGDRPLLTTVSPNGDGFRDVAVLHFRLTRPARVRLDAVATNMIRAGKGGTSSVWHTTRLLGAGPQTLTWRPSRSTQ |
Ga0062595_1009825702 | 3300004479 | Soil | VTPLLLAALALAPALHDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDRAIVHFRLTQPARVQLDVVATNMVRAGKGGTSVVWH |
Ga0062594_1017425962 | 3300005093 | Soil | VTALFLAALALAPALQDLHVTNGSTPFAGDGRLLTTVSPNGDGFRDRAIVHFRLTRPARVELDVVATNMVRAGKTGTSVVWHSGRSFPAGPGT |
Ga0062594_1028127961 | 3300005093 | Soil | VIGAVLASASVLGGPALADLSVTNGSLPFVGDGPLLTTVSPNRDGFRDVAIVHFRLTVAATVRMEVVATNMVRAGQGGTTVIWRTVRRL |
Ga0066814_100697031 | 3300005162 | Soil | VTALVLAAAAVLTAPGPALLDLHVTNGSTPYLGDRPLLTTVSPNRDGFRDVAVVHFRLKHPATVRLEVVATNMVRAGKGGTTIVWKTARHF |
Ga0066672_108623642 | 3300005167 | Soil | VTPLLLVAALLAGPAPRLLDLRVSNGATPFAGDRRLLTTVSPNRDGFRDRALVQFTLTRPATVRLEVVATNMIRA |
Ga0066388_1033669912 | 3300005332 | Tropical Forest Soil | VTALFLAALALAPALQNLHITNGSTPFAGDGPLLTTVSPNGDGFRDRAIVHFRLTRPARVDLDVVATNMVRAGKTGTSVVWHSAR |
Ga0066388_1049756742 | 3300005332 | Tropical Forest Soil | VTALLLAALALSPALKNLYVTNGSTPFSGDGRLLTTVSPNGDGFRDRAIVHFGLARPARVALDVVATNMVR |
Ga0068869_1014415432 | 3300005334 | Miscanthus Rhizosphere | VTALFLAALALAPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDQAIVHFRLTRPARVSMDVVATNMVRAGKGGTSAVWHTSQLFGAGPGTLVWRPARS |
Ga0070667_1015459162 | 3300005367 | Switchgrass Rhizosphere | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVRAGK |
Ga0066681_104865432 | 3300005451 | Soil | VNALFLAALALAPALHNLHVTNGSTPFAGDRPLLTTVSPNGDGFRDKAVVHFRLTRPARIAMDVVATNMVRAGKGGTSTVWHTSRLFGPGPDTLTWRPAPS |
Ga0070662_1005137321 | 3300005457 | Corn Rhizosphere | MTALLLAALALSPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDAATVRFRLTRPARVQLDVVATNMIRAGKGGTSSVWHTSRLFG |
Ga0070681_119952281 | 3300005458 | Corn Rhizosphere | VTALFLAALALAPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDQAIVHFRLTRPARVSMDVVATNMVRAGKGGTSAVW |
Ga0070699_1014631752 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | VIAGVLLAATALAAPNLSGVHVSTGSQPFAGDGPLLATVSPDGDGFRDAATVSFRVDRAATVRLDVVETQQAG |
Ga0073909_103634142 | 3300005526 | Surface Soil | VTALLLAAVSALATPGPALIDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGEGGT |
Ga0073909_107232262 | 3300005526 | Surface Soil | VTALVLAAAAVLTAPGPALLDLHVTNGSTPYLGDRPLLTTVSPNRDGFRDVAVVHFRLKHPATVRLEVVATNM |
Ga0070672_1001486161 | 3300005543 | Miscanthus Rhizosphere | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVRAGKGGTTIVWKAARHFA |
Ga0066699_103804243 | 3300005561 | Soil | VTAALLAALALAPGLQDLHVTNGSVPFAGDRRLLTTVSPNGDGFRDAAFVHFRLARPARVSMDVVATNMVRAGKTGTSSVW |
Ga0066905_1009239702 | 3300005713 | Tropical Forest Soil | LTALFLAALALAPALQDLHVTNGSAPFAGDRRLLTTVSPNADGFRDEAIVHFRLTRPARVAMDVVATNMVRAGK |
Ga0066696_104608852 | 3300006032 | Soil | MIGAVLAAASVLAAPPPALTDLSVTNGSAPFAGDGRLLTTVSPNRDGFRDAATVRFRVTRAAIVRMEIVATNMVRAGR |
Ga0066656_102521793 | 3300006034 | Soil | VTALLLAAAALAPALRDLHVTNGSAPFAGDRTLLTTVSPNGDGFRDAAYVHFRLIRPARVTMDVVATNVIRAGQTGTSRVWHASRHFGTGPGTLVWRP |
Ga0066652_1002764761 | 3300006046 | Soil | VTAAVLAALAFAPTLQNLHVTNGSAPFAGDRPLLTTVSPNGDGFRDAAYVHFRLARPARVSMDVVATNMVRAGKTG |
Ga0070716_1008121042 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | VTALVLAALALASPALHGVHVTNGSAPFAGDRPLLTTVSPNGDGFRDRAIVHFLLTRPATVELDVLATNMVRAGKGGTSVVW |
Ga0070712_1019209451 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVRAGKGGTTIVWKAAR |
Ga0075367_105114021 | 3300006178 | Populus Endosphere | VTALFLAALALAPALQDLHVTNGSTPFAGDNRLLTTVSPNGDGFRDTAVVHFRLTRAARLDLDVLATNMVRAGEGGT |
Ga0074051_114190561 | 3300006572 | Soil | VTALLLAAVSAFATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGKGGT |
Ga0074055_100070512 | 3300006573 | Soil | VTALLLAAVSALATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNM |
Ga0074059_120333492 | 3300006578 | Soil | VTALLLAAVSALATPGPALLDLHISNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGKGGTTVVWRTSRRF |
Ga0074054_121339082 | 3300006579 | Soil | VTALLLAAVSALATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLIRPAQVQLEVVATNMIRAGKGGT |
Ga0074057_121240341 | 3300006605 | Soil | VTALVLAAAAVLTAPGPALLDLHVTNGSTPYLGDRPLLTTVSPNRDGFRDVAVVHFRLKHPATVRLEVVATNMVRAGE |
Ga0066660_113251361 | 3300006800 | Soil | MVTAALLATMALVPSLQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDAAYVRFRLSRPARVSMDVVATNMVRAGKAGTSS |
Ga0079220_118701891 | 3300006806 | Agricultural Soil | VTALVLAALALTPALQDLHVTNGSAPFAGDRALLTTVSPNGDGFRDKAIVHFRLTRPARVTMDVVATNMVRAGKTGTSAV |
Ga0075433_111024932 | 3300006852 | Populus Rhizosphere | VTPLLLAALALAPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDRAIVHFRLTRPGRVQLDVVATNMVRAGKGGTSVVWHTSRLF |
Ga0068865_1016073462 | 3300006881 | Miscanthus Rhizosphere | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVRA |
Ga0075424_1025397441 | 3300006904 | Populus Rhizosphere | VTALFLAALALAPALQDLHVTNGSTPFAGDGRLLTTVSPNGDGFRDRAIVHFRLTRPARVELDVVATNMVRAGKTGTSVVWHSGRSFPAGPGTLTWRPARA |
Ga0105247_105085473 | 3300009101 | Switchgrass Rhizosphere | VTALLLAAVSAFATPGPALLDLNVSNGSVPFAGDRQLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIR |
Ga0105084_10730472 | 3300009811 | Groundwater Sand | VAALAAPGPQLLDLRVTNGSAPFAGDRPLLTTVSPNRDGFRDTAVVRFRLTRPATVRMEVVATNMVRAGKGGTTIVWQTSARL |
Ga0105074_10456101 | 3300010029 | Groundwater Sand | VAALAAPGPQLLDLRVTSGSAPFAGDRPLLTTVSPNRDGFRDTAVVRFRLTRPATVRMEVVATNMV |
Ga0126309_109367751 | 3300010039 | Serpentine Soil | VTALLLAALAVTPAVQNLHVSNGSAPFAGDRPLLTTVSPNGDGFRDTAILHFRLARPARVRLDAVATNMVRAGK |
Ga0134086_103963202 | 3300010323 | Grasslands Soil | VSAVLLAALALGPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDAAVVHFRLTQPARVRLDVVATNMVRAGRGGTSAVWHTSR |
Ga0134080_103796672 | 3300010333 | Grasslands Soil | VTAFLLAALALTPTLQDLHVTNGSAPFSGDRRLLTTESPNGDGFRDAAVVHFRLTRPVRVRLDVVATNMVR |
Ga0134122_114297022 | 3300010400 | Terrestrial Soil | VTALLLAAVSALATPGPALLDLHVSNGSAPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGEGG |
Ga0137391_106746653 | 3300011270 | Vadose Zone Soil | VVTAFVLAAAAMLTAPGPALLDLRVTNGSTPYLGDRRLLTTVSPNRDGFRDAAIVHFGLSRPATVRLEVVATNMVRAGKAGTTIVWRT |
Ga0120157_10443841 | 3300011994 | Permafrost | LLDLGVTNGSTLYLGDGRLLTTVSPNRDGFRDRAIVHFRLSHPATVRLEVVATNMIRAGKGGTTIVWRTAERFPARVSDTLAW |
Ga0137388_116709752 | 3300012189 | Vadose Zone Soil | VTVLLLATALLVGPGPRLQDLHVTNGATPFAGDSPLLTTVSPNRDGFRDRAIVHFTLTRPATVRMEVVATDLIRAGKTGTDVVWRTAR |
Ga0137364_104492981 | 3300012198 | Vadose Zone Soil | VSAVFLAALTLAPALHDLHVTNGSTPFAGDRRLLTTVSPNGDGFRDKAVVHFRLTRPARVALDVVATNIVRAGKGGTSTVWHTSRLFGTGPGTLIWRPA |
Ga0137383_106803522 | 3300012199 | Vadose Zone Soil | VTPLLLAAAAALTAPGPPLLDLRVTNGSTPYLDDRRLLTTVSPNRDGFRDAAFVHFRLRRPATVRLEV |
Ga0137376_100372141 | 3300012208 | Vadose Zone Soil | VTALFLAALALGPALQDLHVATGSAPFAGDRRLLTTVSPNGDGFRDRAIVHFRLTEPAHVRLDVVATNMVRAGKGGTSSIWHTSRSFGAGPGTLAW |
Ga0137367_107583252 | 3300012353 | Vadose Zone Soil | MSAVLLAALALGPALQDLHVTNGSAPFAGDRRVLTTVSPNGDGFRDAAIVHFRLTRPARVRLDVVATNMVRAGKGGTSSVWHT |
Ga0137366_107560562 | 3300012354 | Vadose Zone Soil | VTALLLAAAIVGSPQLTDVHVTNGSKPFAGDRRLLTTVSPNRDGFRDAASVHFRLTRAATVRMEVVATNMV |
Ga0137373_100108391 | 3300012532 | Vadose Zone Soil | VTAVFLAALALAPALQDLHVTNGDRPFARDRRLLTTVSPNGDGFRDAAFVHFRLTRPARVRLDVVATNMVRAGEGGTSSVWHTTQ |
Ga0137394_113356701 | 3300012922 | Vadose Zone Soil | VTPLVLAAAAALTAPGPALLDLHVTNGSTPYLGDRRLLTTVSPNRDGFRDAAVVHFRLLRRATVRLEVVATNMVRAGKGGTTIVWRTARQF |
Ga0164298_103297701 | 3300012955 | Soil | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYLGDRPLLTTVSPNRDGFRDVAVVHFRLLRPATVRLEV |
Ga0164303_111146281 | 3300012957 | Soil | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYLGDRPLLTTVSPNRDGFRDVAVVHFRLLRPATVRLEVVATNMVRAGKGGTTIV |
Ga0164299_100421761 | 3300012958 | Soil | VTALLLAAVSALATPGPALLDLNVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMV |
Ga0164299_108831372 | 3300012958 | Soil | MTAAVLAALALAPALQDLHVTNGSAPFAGDRPLLTTVSPNGDGFRDRAIVHFRLAQPARVQMDVLATNMVRAGKGGTSVVWHTS |
Ga0164301_100736781 | 3300012960 | Soil | MTAAVLAALALAPALQDLHVTNGSAPFAGDRPLLTTVSPNGDGFRDRAIVHFRLAQPARVQMDVLATN |
Ga0164305_109653421 | 3300012989 | Soil | VTALFLAALALAPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDSAIVHFSLARPARVSMDVVATNMIRAGKGGTSAVWHTSRLFGAGPG |
Ga0157374_105958513 | 3300013296 | Miscanthus Rhizosphere | VLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVR |
Ga0120149_10995831 | 3300014058 | Permafrost | VTPLVLAAAAALTAPAPALLDVRVTNGSTPYLGDRRLLTTVSPNRDGFRDAAFVHFRLLRPATVRLEVVATNMVRAGKGGTTIVWRTARHFASGAGT |
Ga0134081_101069391 | 3300014150 | Grasslands Soil | VTAVVLAALALASPALHGVHVTNGSAPFAGDRPLLTTVSPNGDGFRDRAIVHFVLTRSAKVDLDVLATNM |
Ga0163163_105188651 | 3300014325 | Switchgrass Rhizosphere | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVRAGKGGTTIVWKAA |
Ga0120170_10873251 | 3300014823 | Permafrost | VTPLVLAAAAALTAPAPALLDVRVTNGSTPYLGDRRLLTTVSPNRDGFRDAAFVHFRLLRPATVRLEVVATNMVRAGKGGTTIVWRTA |
Ga0134089_104832381 | 3300015358 | Grasslands Soil | VTPLVLAAAAALTAPGPALFDLRVTNGSTPYLGDRRLLTTVSPNRDGFRDAAFAHFRLLRPATVRLEVVATNMVRAGKGGTKIVWRTARQ |
Ga0132257_1004410561 | 3300015373 | Arabidopsis Rhizosphere | VTALFLAALALAPALQDLHVTNGSTPFAGDGRLLTTVSPNGDGFRDRAIVHFRLTRPARVELDVVATNMVRAGKTGTSVVWHSGHSFPAGPGTLT |
Ga0134069_12880861 | 3300017654 | Grasslands Soil | VIASVLVAAGALAAPSPALLDLHVSNGSAPFAGDTGLLTTVSPNHDGFRDAAVVRFRLTRAATVRLEIVATNMVRAGKGGTTVLWRTARYFDAGQGS |
Ga0134112_102391482 | 3300017656 | Grasslands Soil | VTPLVLAAAAALTAPGPALLDLRVTNGSTPYLGDGRLVTTVSPNRDGFRDAAFVHFRLLRPATVRLEVVATNMVRAGKGGTRIVWRTARQF |
Ga0184608_102186331 | 3300018028 | Groundwater Sediment | VTALFLAALALGPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDTAIVHFRLTQPARVRLDVVATNMVRAGKGGTSSVWHTSRLLAAGPRTL |
Ga0184608_104036002 | 3300018028 | Groundwater Sediment | VLTALVLTSAAVLTAPGPALLDLRVTNGSVPYLGDRRLLTTVSPNRDGFRDEAVVHFRLVRPATVRLEVVATNMVRAG |
Ga0184620_101408121 | 3300018051 | Groundwater Sediment | VVTALVLASAAALTAPAPALRDLRVTNGSVPYLGDWRLLTTVSPNRDGFRDEAVVHFRLQRPATVRLEVVATNMVRAGKGGTTIVWKTARHFAAGPG |
Ga0184621_100025461 | 3300018054 | Groundwater Sediment | VTALLLAAVSAFAAPGPALLDLRVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAPVQLEVVATNMVRAGK |
Ga0184617_11375702 | 3300018066 | Groundwater Sediment | VVTALVLASAAALTAPAPALRDLRVTNGSVPYLGDWRLLTTVSPNRDGFRDEAVVHFRLQRQATVRLEVVATNMV |
Ga0066667_103286531 | 3300018433 | Grasslands Soil | VTAAVLAALAFAPTLQNLHVTNGSAPFAGDRPLLTTVSPNGDGFRDAAYVHFRLARPARVSMDVVATNMVRAGKTGTSSVWH |
Ga0066669_116104711 | 3300018482 | Grasslands Soil | VTALLLSALALTPTLQDLHVTNGSAPFSGDRRLLTTVSPNGDGFRDRAIVHFRLTRPALVRMDVVATNMVRAGKGGTSVV |
Ga0173482_105738702 | 3300019361 | Soil | MLSGPAPALADLHVTNGSAPFAGDGRLLTTVSPNRDGFRDAAVVHFRLTRAATVVMEIVATNMVRAGKGGTTVLWRTARRFDAGRRSLTWRPAPS |
Ga0193705_10654811 | 3300019869 | Soil | VTALLLAAVSAFATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNDDGFRDSATVRFRLTRPAQVQLEVVATNMVRAGKGGTTVIWRTSRRFAAGPRSLTW |
Ga0193700_10159052 | 3300019873 | Soil | VTALLLAAVSALATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMVRAGKGGTAVI |
Ga0193722_10743482 | 3300019877 | Soil | VVAALVLTSAAALTAPAPALRDLRVTNGSVPYLGDWRLLTTVSPNRDGFRDEAVVHFRLQRPATVRLEVVATNMVRAGKGGTTIVWKTARHFAAGA |
Ga0193749_10669561 | 3300020010 | Soil | VTALVLAAAAVLTTPGPALLDLGVTNGSTAYLGDGRLLTTVSPNRDGFRDRAIVHFRLSRSATVRLEVVATNMIRAG |
Ga0193719_102364221 | 3300021344 | Soil | VVTALVLASAAALTAPAPVLRDLRVTNGSVPYLGDWRLLTTVSPNRDGFRDEAVVHFRLLRPATVRLEVVATNMVRA |
Ga0193714_10513571 | 3300023058 | Soil | VVTALVLTSAAALTAPAPALRDLRVTNGSVPYLGDWRLLTTVSPNRDGFRDEAVVHFRLQRPATVRLEV |
Ga0179589_100149544 | 3300024288 | Vadose Zone Soil | VTALLLAAVSAFATPGPALLDLHVSNGSVPFAADRPLLTTVSPNGDGFRDSATVRFRLTRPAAVQLEVVATNMIRAGKGGTTVVWRTSRRFAAGRAR |
Ga0207692_105993962 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | VTALLLAAVSAFTTPGPALLDLNVSNGSVPFAGDRQLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGK |
Ga0207688_100427294 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | VTALLLAAVSAFATPGPALLDLNVSNGSVPFAGDRQLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGKGGTTVVWRTSRRFRR |
Ga0207646_106164771 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | VTAVVLAALALGGGPVLQDISVTNGSIPFAGDRALLTTVSPNGDGFRDAAIVHFRLTAAARVQLDVVATNLVRAGQTGTSAVWHTARTFAAGPG |
Ga0207706_103803693 | 3300025933 | Corn Rhizosphere | MTALLLAALALSPALQDLHVTNGSAPFAGDRRLLTTVSPNGDGFRDAATVRFRLTRPARVQLDVVATNMIRAGKGGTSSVWHTSRLFGEGPGGFVVSG |
Ga0207669_112002453 | 3300025937 | Miscanthus Rhizosphere | VIGVLVAAAAVSASSPSPVVDLRVTNGSAPFAGDRRLLTTVSPNRDGFRDRAIVHFRLLRPARVRLEVLATNMVRAGVGGTT |
Ga0207702_112316072 | 3300026078 | Corn Rhizosphere | VTALFLAALALAPALQDLHVTNGSTPFAGDGRLLTTVSPNGDGFRDRAIVHFRLTRPARVELDVVATNMVRAGKTGTSVVWHSGRSFPAGAGTLTWRPAR |
Ga0207683_111305882 | 3300026121 | Miscanthus Rhizosphere | VTALVLAAAAVLTAPGPALHDLRVTNGSTPYFGDRPLLTTVSPNRDGFRDVAVVHFRLLHPATVRLEVVATNMVRAGKGGTTI |
Ga0207698_100331731 | 3300026142 | Corn Rhizosphere | VTALLLAAVSAFTTPGPALLDLNVSNGSVPFAGDRQLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMIRAGKGGTTVVWRTSRRFAA |
Ga0209027_12510362 | 3300026300 | Grasslands Soil | VTALFLAALALTPALQDLHVTNGSTPFAGDNRLLTTVSPNGDGFRDSAVVHFRLTRPARVELDVVATNMVRAGEGGTSTVWHTSRLFGRGPGTLTWRPARS |
Ga0209058_11091653 | 3300026536 | Soil | VTPLVLAAAAALTAPGPALLDLRVTNGSTPYLGDGRLVTTVSPNRDGFRDAAFVHFRLLRPTTVRLEVVATNMMRAGKGGTEI |
Ga0209056_104471142 | 3300026538 | Soil | VTAALLAALALAPGLQGLHVTNGSVPFAGDRRLLTTVSPNGDGFRDAAFVHFRLARPARVSMDVVATNMVRAGKTGTSSVWHT |
Ga0209474_105519642 | 3300026550 | Soil | VTAAVLAALALAPTLQNLHVTNGSAPFAGDRPLLTTVSPNGDGFRDAAYVHFRLARPARVSMDVVAT |
Ga0307293_1000086711 | 3300028711 | Soil | VTALLLAAVSAFATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNDDGFRDSATVRFRLTRPAQVQLEVVATNMVRAGKGGTAVIWRTSRRFAA |
Ga0307313_102513951 | 3300028715 | Soil | VTPLLLAAAAALTAPGSPLLDLRVTNGSTPYLGDRRLLTTVSPNRDGFRDAAFVHFRLRRPATVRLEVVA |
Ga0307313_102649232 | 3300028715 | Soil | VTALVLAAAAALTAPGPALLDLRVTNGGAPYLGDRRLLTTVSPNRDGFRDVAVVQFRLLRPATVRLEVVATKMVRAGKAGPTIVW |
Ga0307311_100843672 | 3300028716 | Soil | VLTALVLTSAAVLTAPGPALLDLRVTNGSAPYLGDRRLLTTVSPNSDGFRDEAVVHFRLLRPATVRLEVVATNMVRAGR |
Ga0307298_100009419 | 3300028717 | Soil | VTALLLAAVSAFATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNDDGFRDSATVRFRLTRPAQVQLEVVATNMVRAGKGGTAVIWRTS |
Ga0307318_103218031 | 3300028744 | Soil | VTALLLAAVSALATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMI |
Ga0307287_103010281 | 3300028796 | Soil | VLTALVLTSAAVLTAPGPALLDLRVTNGSAPYLGDRRLLTTVSPNSDGFRDEAVVHFRLLRPATVRLEVV |
Ga0307296_100022861 | 3300028819 | Soil | VTALLLAAVSAFATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNDDGFRDSATVRFRLTRPAQVQLEVVATNMVRAGKGGTAVI |
Ga0307289_102027832 | 3300028875 | Soil | VTALVLAAAAVLTAPGPALLDLRVTNGSTPYLGDRPLLTTVSPNRDGFRDVAIVHFRLLRPATVRLEVVATNMVSAGK |
Ga0307308_100072227 | 3300028884 | Soil | VTTLLLAAVSAFAAPGPALLDLRVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMVRAGKGGTAVIWR |
Ga0308194_100711621 | 3300031421 | Soil | VVTALVLTSAAALTAPAPALRDLRVTNGSVPYLGDRRLLTTVSPNRDGFRDEAVVHFRLQRPATVRLEVVATNMVRAGQGGTTIVWKTA |
Ga0307505_103436662 | 3300031455 | Soil | VTALLLAAVSALATPGPALLDLHVSNGSVPFAGDRPLLTTVSPNGDGFRDSATVRFRLTRPAQVQLEVVATNMVSAGKGGTTVIWRTSRR |
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