NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080390

Metagenome / Metatranscriptome Family F080390

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080390
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 121 residues
Representative Sequence MILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSI
Number of Associated Samples 104
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(13.913 % of family members)
Environment Ontology (ENVO) Unclassified
(39.130 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.130 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.
1NODE_06490532
2AL9A1W_11207281
3C688J18823_108983961
4Ga0058862_118700382
5Ga0066812_10059141
6Ga0066823_101013042
7Ga0066684_109265352
8Ga0070680_1000264494
9Ga0068868_1000639893
10Ga0070689_1000461083
11Ga0070691_106222932
12Ga0070687_1004977812
13Ga0070668_1003100711
14Ga0070709_113920291
15Ga0070714_1014080512
16Ga0070710_104442662
17Ga0070711_1014667431
18Ga0070705_1001887611
19Ga0070700_1015543572
20Ga0070694_1014836312
21Ga0070678_1008303892
22Ga0070679_1017843311
23Ga0070704_1017341041
24Ga0068855_1013747451
25Ga0068857_1010387011
26Ga0068864_1008489362
27Ga0066903_1078625991
28Ga0075275_10916072
29Ga0066656_110441572
30Ga0070716_1009123401
31Ga0070716_1013663971
32Ga0070716_1015681961
33Ga0070712_1005373762
34Ga0097621_1008687122
35Ga0068871_1013243482
36Ga0079222_116606712
37Ga0079221_110757411
38Ga0075431_1007243832
39Ga0099827_107648572
40Ga0105245_124000812
41Ga0105245_124964342
42Ga0105243_106040762
43Ga0105237_111305171
44Ga0105238_117275991
45Ga0105238_123355942
46Ga0134128_101450693
47Ga0134128_110887742
48Ga0134128_118666891
49Ga0134122_128898182
50Ga0105246_110811191
51Ga0120134_10018371
52Ga0137378_102876681
53Ga0150985_1161607701
54Ga0137370_108975861
55Ga0164300_100564871
56Ga0164300_101516731
57Ga0164300_110626361
58Ga0164298_104759011
59Ga0164301_110259702
60Ga0164304_102062641
61Ga0164304_111485771
62Ga0164306_100788821
63Ga0157369_118054431
64Ga0157374_101091563
65Ga0120172_11546692
66Ga0120149_12196581
67Ga0163163_109239192
68Ga0157380_119840942
69Ga0120104_10047873
70Ga0157379_104348862
71Ga0132255_1057281952
72Ga0184608_101664522
73Ga0184621_103048631
74Ga0066655_108312712
75Ga0193705_10609651
76Ga0193728_12021621
77Ga0222622_107301681
78Ga0207656_106889071
79Ga0208076_10192821
80Ga0207692_109822571
81Ga0207680_110433271
82Ga0207647_102607951
83Ga0207707_100666283
84Ga0207707_109344712
85Ga0207695_108231841
86Ga0207671_107682171
87Ga0207693_114018611
88Ga0207660_101277941
89Ga0207649_107592231
90Ga0207652_107718622
91Ga0207709_113524682
92Ga0207665_109905622
93Ga0207691_108090822
94Ga0207711_109106262
95Ga0207661_101588652
96Ga0207661_115242962
97Ga0207667_118471771
98Ga0207651_109076782
99Ga0207640_100980932
100Ga0207639_111767112
101Ga0207708_112235581
102Ga0207698_127488182
103Ga0209027_11404132
104Ga0209265_12129322
105Ga0208889_10065231
106Ga0208520_10040351
107Ga0207983_10401582
108Ga0307311_102180352
109Ga0307296_101467302
110Ga0307312_103207312
111Ga0247826_115572022
112Ga0307499_101670062
113Ga0308175_1004408441
114Ga0307472_1001098371
115Ga0373959_0216668_195_512
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.84%    β-sheet: 18.92%    Coil/Unstructured: 43.24%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110MILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSISequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains




 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Agricultural Soil
Arctic Peat Soil
Permafrost
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Rice Paddy Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Host-Associated
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Sugar Cane Bagasse Incubating Bioreactor
12.2%4.3%3.5%4.3%13.9%7.0%7.0%4.3%4.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
NODE_064905323300000156Sugar Cane Bagasse Incubating BioreactorMTLIILAIGLFGAATYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGVIVLISGMVPAAMGMLVALGGGAIGYIAPD
AL9A1W_112072813300000878PermafrostMMLIIFAIGLFGAAAYLLLTGLTVRQREVAGTLRKAKRYGLQSQREVETRRSVNDRVFGPLTAKVAAVTLRLLPRTDQNVVANRLVAAGLARSMSPQMYLAIKGGLVMISIAFGFV
C688J18823_1089839613300001686SoilMIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADVTQKLLPKADPNEIHARLMA
Ga0058862_1187003823300004803Host-AssociatedMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQMYLALKGGLV
Ga0066812_100591413300005105SoilMIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVATALVLGVL
Ga0066823_1010130423300005163SoilMIIILAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADVTQKLLPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGL
Ga0066684_1092653523300005179SoilMILIILAIGLFGAATYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLIVLVSGMVPA
Ga0070680_10002644943300005336Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQNQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGLIVLV
Ga0068868_10006398933300005338Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMS
Ga0070689_10004610833300005340Switchgrass RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGL
Ga0070691_1062229323300005341Corn, Switchgrass And Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQM
Ga0070687_10049778123300005343Switchgrass RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQNQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLLVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINARTRGRREMMQME
Ga0070668_10031007113300005347Switchgrass RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLS
Ga0070709_1139202913300005434Corn, Switchgrass And Miscanthus RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREVAVSLGKAKRYGVQSQREVETRRSVNDRIVGPLTQKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLIVLVSGLVPAAMGMLVALGGAAIGYIAPDFFINSRTRARREMMQMELPN
Ga0070714_10140805123300005435Agricultural SoilMILIVLAIGMFAAATFMLLSGLTVRQREVAVTLRKAKRYGVQSQREVETRRSVNDRLVGPLTAKVAGVTQRLLPRTDPNLIANRLMAAGLA
Ga0070710_1044426623300005437Corn, Switchgrass And Miscanthus RhizosphereMILIVLAIGLFGAATYVLLTGLTVRQREVAVTLRKAKRYGIQSQREVETRRSVNDRLVGPLTAKVAAITQRFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLIFTAIAFGGIVLVSGAVSPVIGLLVALGGAAIGYIAPDFFINS
Ga0070711_10146674313300005439Corn, Switchgrass And Miscanthus RhizosphereMILIVLAIGLFGAATYVLLTGLTVRQREVAVTLRKAKRYGMQSQREVETRRSVNERLVGPLTAKLAAVTQRFMPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMAVALGGVVLVSGALPPAMGMLVALGG
Ga0070705_10018876113300005440Corn, Switchgrass And Miscanthus RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMS
Ga0070700_10155435723300005441Corn, Switchgrass And Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGL
Ga0070694_10148363123300005444Corn, Switchgrass And Miscanthus RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSVAFGLMVLVSGLVPAAMGMLVALGGA
Ga0070678_10083038923300005456Miscanthus RhizosphereMTLIILAVGLFGAATYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNVIANRLMAAGLARSMSP
Ga0070679_10178433113300005530Corn RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGL
Ga0070704_10173410413300005549Corn, Switchgrass And Miscanthus RhizosphereMLIVLGIGFFCSAVYVLLTGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGLIVLVSGLVPAAM
Ga0068855_10137474513300005563Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQNQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGLIVLVSGLVPA
Ga0068857_10103870113300005577Corn RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINA
Ga0068864_10084893623300005618Switchgrass RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKG
Ga0066903_10786259913300005764Tropical Forest SoilMILIIIAIGLLGAATYLLLSGLTVRQREVAVSLGKAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLIVLISGLVPAAMGLLVALGGAAIGYIAPDFFINARTRGRREMMQMELPNILDLL
Ga0075275_109160723300005892Rice Paddy SoilMTLIILAIGLFGAAAYLLLTGLTVRQREVAVSLGKAKRYGAQTQREVETRRSVNDRIVGPLTAKVAGVTQRVLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFMSVALGFLLVISGIPPAMGMLTALGGGAIGYIAPDFF
Ga0066656_1104415723300006034SoilMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAAM
Ga0070716_10091234013300006173Corn, Switchgrass And Miscanthus RhizosphereMILIIIAVGLLGAATYLLLSGLTVRQREVAVSLGKAKRYGVQTQREAETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNEIANKLMAAGLARSMSPQMYLALKGGLVFTAIAFGLLVLVSGLVPAAMGMLVALGGGA
Ga0070716_10136639713300006173Corn, Switchgrass And Miscanthus RhizosphereMTLIILAVALFGAAAYLLISGLTVRQREVAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTAKVAGVTQRVLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFLSIAFGGVLMITGLPPAMGMLIGLGGGAIGYIAPDFFINARTRGRRELMQSDLPNVLD
Ga0070716_10156819613300006173Corn, Switchgrass And Miscanthus RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQMYLALKGGLVTTALVVGILMAA
Ga0070712_10053737623300006175Corn, Switchgrass And Miscanthus RhizosphereMILIVLAIGMFAAATFMLLSGLTVRQREVAVTLRKAKRYGVQSQREVETRRSVNDRLVGPLTAKVAGVTQRLLPRTDPNLIANRLMAAGLARSMSPQMYLAIKGGL
Ga0097621_10086871223300006237Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAAMGMLVALGGAAIGYIAPDFFINSRTRGRREMMQMELPN
Ga0068871_10132434823300006358Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAAMGMLVALGG
Ga0079222_1166067123300006755Agricultural SoilMIIVLAIGMFCASVYMLLSGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHARLMAAGL
Ga0079221_1107574113300006804Agricultural SoilMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTQKVAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGL
Ga0075431_10072438323300006847Populus RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQMYLALKGGLVTT
Ga0099827_1076485723300009090Vadose Zone SoilMIIVLAIGLFCASIYMLLSGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHGRLMAAGLSRSMSPQMYLALKGGLVAIALLLGIVVA
Ga0105245_1240008123300009098Miscanthus RhizosphereMIIVLAIGMFCASVYMLLSGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHARLMAAGLSRS
Ga0105245_1249643423300009098Miscanthus RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAAMGMLVALGGAAIGYIAP
Ga0105243_1060407623300009148Miscanthus RhizosphereMTLIILAVGLFGAATYLLLTGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAI
Ga0105237_1113051713300009545Corn RhizosphereMILIILAIGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGL
Ga0105238_1172759913300009551Corn RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAAMGMLVALGGAAIGYIAPDFFINAKVRGRREMMQMELPNVLD
Ga0105238_1233559423300009551Corn RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSI
Ga0134128_1014506933300010373Terrestrial SoilMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSR
Ga0134128_1108877423300010373Terrestrial SoilMILIILAIGLFGAAAYLLLSGLTVRQRQVAVALGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAVVFGAIVLISGMVPAAMVMLVALGGGAIGYIAPDFFINSRTRGRREMMQM*
Ga0134128_1186668913300010373Terrestrial SoilMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQM
Ga0134122_1288981823300010400Terrestrial SoilMILIILAIGLFGAATFLLLSGLTVRQRAVAVALRRAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLIVLVSGMVPAAMGMLVALGGGAIG
Ga0105246_1108111913300011119Miscanthus RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLAIKGGLVFMSVAFGLIVLVSGMV
Ga0120134_100183713300012004PermafrostMMLIIFAIGLFGAAAYLLLTGLTVRQREVAGTLRKAKRYGLQSQREVETRRSVNDRVFGPLTAKVAAVTLRLLPRTDQNVVANRLVAAGLARSMSPQMYLAIKGGLVMISIAFGFVVMVSGALSPAIGILVALGGAAIGYIAPDFYINSRT
Ga0137378_1028766813300012210Vadose Zone SoilMTLIILAIALFGAATYLLLTGLTVRQREVAVTLRKAQRYGLQSQRDVETRKSVNDRIVGPLTSKVAAVTQKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVVVSILLGLMVLVSGAVPPAMGMLVALGGSAIGYIAPDFFINARTRGRRELMQME
Ga0150985_11616077013300012212Avena Fatua RhizosphereMIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADVTQKLLPKADPNEIHARLMAAGLSRSM
Ga0137370_1089758613300012285Vadose Zone SoilMIIVLAIGMFCASVYMLLSGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPLTSKVAGVTQKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVVVSILLGVLVLVSGAVPPA
Ga0164300_1005648713300012951SoilMIIILAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHGRLMAAGLSRSMSPQMYLARKGGLVTTALVLGIISAA
Ga0164300_1015167313300012951SoilMILIILAIGLFGAATFLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLIVLVSGMVPAAMGMLVALGGADEDLLVARERPIVL
Ga0164300_1106263613300012951SoilMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKLLPKADPNEIHARLMAAGLSRSM
Ga0164298_1047590113300012955SoilMILIILAIGLFGAATFLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLIVLVSGMVPAAMGMLVALGGGAIGYIAPDF
Ga0164301_1102597023300012960SoilMILIILAIGLFGAATFLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLAIKGGLVFTAIAFGLIVLVSGLVPAAMGMLVALGGGAIG
Ga0164304_1020626413300012986SoilMILIIIAVGLLGAATYLLLSGLTVRQREVAVSLGKAKRYGVQTQREAETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNEIANKLMAAGLARSMSPQMYLALKGGLVFTAIAFGLLVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINARTRGRREMMQMELPNIL
Ga0164304_1114857713300012986SoilMTLIILAIGLFGAATYVLLTGLTVRQREVAVTLRKAKRYGMQSQREVETRRSVNERLVGPLTAKLAAVTQRFMPRTDQNLIANRLMAAGLARSMSPQMYLALKGGL
Ga0164306_1007888213300012988SoilMTLIILAIGLFGAATYLLLSGLTVRQREVAVTLRKAKRYGMQSQREVETRRSVNERLVGPLTAKLAAVTQRFMPRTDQNLIANRLMAAGLARSMSPQMYLALKGGLIFTAIAFGVIMLVSGAVPPA
Ga0157369_1180544313300013105Corn RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFMAVVFGAIVLVSGMVPAAMGMLVALGGGAIGYIAPDFFINS
Ga0157374_1010915633300013296Miscanthus RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKCLPRTDRNVIANRLMAAGLARSMSPQ
Ga0120172_115466923300013765PermafrostMMLIIFAIGLFGAAAYLLLTGLTVRQREVAVTLRKAKRYGMQSQREVETRRSVNERVFGPLTARVAAVTLRVLPRTDQNVIANRLVAAGLARSMSPQMYLAIKGGLVMISVVFGVLVMVSGAMPPA
Ga0120149_121965813300014058PermafrostMMLIIFAIGLFGAATYLLLTGLTVRQREVAGNLRKAKRYGMQSRREVETRRSVNDRVFGPLTAKVAAVTLRVLPRTDQNVVANRLVAAGLARSMSPQMYLAIKGGLVMVSVAFGVLVMVSGAMPPAIGILVALG
Ga0163163_1092391923300014325Switchgrass RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSP
Ga0157380_1198409423300014326Switchgrass RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQMYLALKGGLVTTALVVGIL
Ga0120104_100478733300014829PermafrostMMLIIFAIGLFGAAAYLLLTGLTVRQREVAGTLRKAKRYGLQSQREVETRRSVNDRVFGPLTAKVAAVTLRMLPRTDQNVVANRLVAAGLARSMSPQMYLAIKGGLVT
Ga0157379_1043488623300014968Switchgrass RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQM
Ga0132255_10572819523300015374Arabidopsis RhizosphereMTLIILAVGLLAAATYLLLSGLTVRQREVAVALRKAKRYGVQNQREIETRRSVNDRIVGPMTAKVAAVSARFLPRTDPNDIANRLMAGGLARSMSPQM
Ga0184608_1016645223300018028Groundwater SedimentMIIVLAIGMFCASIYMLLSGLTVRQREIAISLRKAKRYGTRDQREIETRRSVNERLVGPLTQQIADVTQKILPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVA
Ga0184621_1030486313300018054Groundwater SedimentMIIVLAIGMFCASIYMLLSGLTVRQREIAISLRKAKRYGTRDQREIETRRSVNERLVGPLTQQIADVTQKILPKSDPNEIHARLMAAGLSRSMSPQ
Ga0066655_1083127123300018431Grasslands SoilMILIILAIGLFGAATYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVSDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLIVLVSGMVPAAMG
Ga0193705_106096513300019869SoilMIIVLAIGMFCASIYMLLSGLTVRQREIAISLRKAKRYGTRDQREIETRRSVNERLVGPLTQQIADVTQKILPKSDPNEIHARLMAAGLSRSM
Ga0193728_120216213300019890SoilMMLIIFAIGLFGAAAYLLLTGLTVRQREVAGTLRKAKRYGLQSQREVETRRSVNDRVFGPLTAKVAAVTLRVLPRTDQNVVANRLVAAGLARSMSPQMYLAIKGGLVMISIAFGFVVMVSGALS
Ga0222622_1073016813300022756Groundwater SedimentMIIVLAIGMFCASIYMLLSGLTVKQREIAISLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHGRLMA
Ga0207656_1068890713300025321Corn RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSV
Ga0208076_101928213300025464Arctic Peat SoilMTLIILAFGLFGAATYLLLTGLTVRQREVAGTLRKAKRYGMQSQREVETRRSVNDRIFGPLTARVAAVTLRVLPRTDQNVVANRLVAAGLARSMSPQMYLAIKGGMVMIAIAVGAIVMVSGAVPPAIG
Ga0207692_1098225713300025898Corn, Switchgrass And Miscanthus RhizosphereMILIVLAIGMFAAATFMLLSGLTVRQREVAVTLRKAKRYGVQSQREVETRRSVNDRLVGPLTAKVAGVTQRLLPRTDPNLIANRLMAAGLARSMSPQMYLAIKGGLVGASVLLGILVLASGAVPPAIGLL
Ga0207680_1104332713300025903Switchgrass RhizosphereMTLIILAVGLFGAATYLLLTGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSVAFG
Ga0207647_1026079513300025904Corn RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSVAFGLMVLVSGLVPAAMGMLVALG
Ga0207707_1006662833300025912Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQNQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGLIVLVSGL
Ga0207707_1093447123300025912Corn RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGLIVLVSGL
Ga0207695_1082318413300025913Corn RhizosphereMILIILAIGLFGAAAYLLLSGLTVRQRQVAVALGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAVVFGAIVLVSGMVPAAMGMLVALGGGAIGYIAPD
Ga0207671_1076821713300025914Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQNQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVF
Ga0207693_1140186113300025915Corn, Switchgrass And Miscanthus RhizosphereMILIVLAIGMFAAATFMLLSGLTVRQREVAVTLRKAKRYGVQSQREVETRRSVNDRLVGPLTAKVAGVTQRLLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLLVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINARTRG
Ga0207660_1012779413300025917Corn RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGG
Ga0207649_1075922313300025920Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLALKGGLVFTAIGFGLIVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINAKVRGRREMMQMELPNV
Ga0207652_1077186223300025921Corn RhizosphereMTLIILAVGLFGAAAYLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRRSVNDRIVGPMTHKIAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIGVGLIVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINAKVRG
Ga0207709_1135246823300025935Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMYLAL
Ga0207665_1099056223300025939Corn, Switchgrass And Miscanthus RhizosphereMILIILAIGLFGAATFLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLAIKGGLVFTAIAFGLIVLVSGMVPAAMGMLVALGGGAI
Ga0207691_1080908223300025940Miscanthus RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQMYLALKGGLVTTA
Ga0207711_1091062623300025941Switchgrass RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMAAGLSRSMSPQMYLA
Ga0207661_1015886523300025944Corn RhizosphereMILIIIAVGLLGAATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMY
Ga0207661_1152429623300025944Corn RhizosphereMILIILAIGLFGAAAYLLLSGLTVRQRQVAVALGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAVVFGAIVLISGMVPAAMGMLVALGGG
Ga0207667_1184717713300025949Corn RhizosphereMILIIIAIGLFGAAAYLLLSGLTVRQRQVAVALGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAVAFGAIVLVS
Ga0207651_1090767823300025960Switchgrass RhizosphereMIIVLAIGLFCASIYMLLGGLTVKQREIALTLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADITQKILPKADPNEIHARLMA
Ga0207640_1009809323300025981Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAVVFGAIVLVSGMVPAAMGMLVALGGGAIGYIAPDFFINSRTRGRREMMQMELPNILD
Ga0207639_1117671123300026041Corn RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQNQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNVIANRLMAAGLARSMSPQMY
Ga0207708_1122355813300026075Corn, Switchgrass And Miscanthus RhizosphereMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVPAA
Ga0207698_1274881823300026142Corn RhizosphereMILIIIAIGLFGAAAYLLLSGLTVRQRQVAVALGKAKRYGVQTQREVETRRSVNDRIVGPLTHKLAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAVAFGAIVLVSGVVPAAMGMLVALGGGA
Ga0209027_114041323300026300Grasslands SoilMILIILAIGLFGAATYLLLSGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMS
Ga0209265_121293223300026308SoilMILIVIAVGLLGVATYLLLTGLTVRQREIAVSLGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNLIANRLMAAGLARSMSPQMYLALKGGLVFMSIAFGLMVLVSGLVP
Ga0208889_100652313300026891SoilMIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVATAL
Ga0208520_100403513300026912SoilMIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKSDPNEIHARLMAAGLSRSMSP
Ga0207983_104015823300027310SoilMIIILAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADVTQKLLPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVVTALVLGVLVAAS
Ga0307311_1021803523300028716SoilMIIVLAIGMFCASIYMLLSGLTVRQREIAISLRKAKRYGTRDQREIETRRSVNERLVGPLTQQIADVTQKILPKSDPNEIHARLMAAGLSRSMSPQMYLALK
Ga0307296_1014673023300028819SoilMIIVLAIGMFCASIYMLLSGLTVRQREIAISLRKAKRYGTRDQREIETRRSVNERLVGPLTQQIADVTQKILPKSDPNEIHARLMAAGL
Ga0307312_1032073123300028828SoilMILIILAIGLLGAATYLLLSGLTVRQREVAVSLGKAKRYGVQTQREAETRRSVNDRIVGPLTHKVAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAIAFGVIVLISGLVPAAMGMLVALGGGAIGYIAPDFFI
Ga0247826_1155720223300030336SoilMIIVLAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPMTQQIADVTQKLLPKSDPNEIHARLMAAGLSRSMSPQMYLALKGGLVAAALGLGVIVA
Ga0307499_1016700623300031184SoilMIIVLAIGMFCASIYMLLSGLTVKQREIAMTLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHGRLMAAGLSRSMSPQMYL
Ga0308175_10044084413300031938SoilMILIIIAIGLFGAAAYLLLSGLTVRQRQVAVALGKAKRYGVQTQREVETRRSVNDRIVGPLTHKIAAVTSKFLPRTDPNEIANRLMAAGLARSMSPQMYLALKGGLVFMAIAFGAIVLVSGLVPAAMGMLVALGGGAIGYIAPDFFINART
Ga0307472_10010983713300032205Hardwood Forest SoilMILIILAIGLFGAATFLLLSGLTVRQREVAVALRRAKRYGVQTQREVETRKSVNDRIVGPLTHKVAAVTSKFLPRTDPNQIANRLMAAGLARSMSPQMYLALKGGLVFTAIAFGLIVLVSGMVPAAMGMLVALGGGAIGYIAPDFFINSRTRGRREIMQMELPNI
Ga0373959_0216668_195_5123300034820Rhizosphere SoilMIIILAIGMFCASIYMLLSGLTVKQREIAITLRKAKRYGTRDQREIETRRSVNDRIVGPLTQQIADITQKILPKADPNEIHGRLMAAGLSRSMSPQMYLALKGGLV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.