Metagenome / Metatranscriptome Family F080332

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080332
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	125 residues
Representative Sequence	VNTSFFANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNS
Number of Associated Samples	106
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.61 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	93.04 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.522 % of family members)
Environment Ontology (ENVO)	Unclassified (28.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.783 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.14% β-sheet: 20.34% Coil/Unstructured: 41.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01345	DUF11	14.78
PF01699	Na_Ca_ex	6.96
PF08239	SH3_3	5.22
PF00069	Pkinase	1.74
PF08541	ACP_syn_III_C	0.87
PF14329	DUF4386	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	6.96
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.96
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	6.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	95.65 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.65 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	16.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.43 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	16.52 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.57 %
Unclassified	root	N/A	1.74 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.87 %

Name	Rank	Taxonomy	Distribution
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	13.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.57 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	2.61 %
Unclassified	root	N/A	1.74 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	13.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.57 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	2.61 %
Unclassified	root	N/A	1.74 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.87 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	12.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.57 %
Patulibacter minatonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	2.61 %
Unclassified	root	N/A	1.74 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.87 %
Frankia alni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia alni	0.87 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.87 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	12.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.57 %
Patulibacter minatonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	2.61 %
Unclassified	root	N/A	1.74 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.87 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.87 %
Frankia alni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia alni	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1047506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0861049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300000550\|F24TB_11848402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1026682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10018999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1889	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1006448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1662	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1005953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2308	Open in IMG/M
3300002568\|C688J35102_118814665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	600	Open in IMG/M
3300005180\|Ga0066685_11132758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	510	Open in IMG/M
3300005181\|Ga0066678_10453127	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300005367\|Ga0070667_101407853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	654	Open in IMG/M
3300005438\|Ga0070701_11376991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia alni	506	Open in IMG/M
3300005440\|Ga0070705_100449827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300005444\|Ga0070694_100519763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300005445\|Ga0070708_102155331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	515	Open in IMG/M
3300005467\|Ga0070706_100308305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1477	Open in IMG/M
3300005471\|Ga0070698_100308028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1515	Open in IMG/M
3300005545\|Ga0070695_100101155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1941	Open in IMG/M
3300005549\|Ga0070704_100493387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300005553\|Ga0066695_10531592	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005558\|Ga0066698_10452620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300005560\|Ga0066670_10600468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300005563\|Ga0068855_100898991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300005566\|Ga0066693_10377903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300005574\|Ga0066694_10368944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300005587\|Ga0066654_10474503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300005598\|Ga0066706_10364817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300006031\|Ga0066651_10224745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300006031\|Ga0066651_10600046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300006034\|Ga0066656_10163296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300006034\|Ga0066656_11148905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300006046\|Ga0066652_100679169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300006058\|Ga0075432_10461720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300006175\|Ga0070712_100075088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2430	Open in IMG/M
3300006175\|Ga0070712_101170145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300006806\|Ga0079220_11234401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	620	Open in IMG/M
3300006880\|Ga0075429_100982610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300009098\|Ga0105245_10629692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300009176\|Ga0105242_12522493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300009545\|Ga0105237_10709532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300009553\|Ga0105249_10783559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300010073\|Ga0127429_141996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	532	Open in IMG/M
3300010120\|Ga0127451_1049371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300010121\|Ga0127438_1069579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	556	Open in IMG/M
3300010333\|Ga0134080_10086445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1276	Open in IMG/M
3300010337\|Ga0134062_10156157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300010337\|Ga0134062_10662222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	544	Open in IMG/M
3300010364\|Ga0134066_10030548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1270	Open in IMG/M
3300010366\|Ga0126379_13411991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300010371\|Ga0134125_10064506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4078	Open in IMG/M
3300010373\|Ga0134128_12311743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300010375\|Ga0105239_13037033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300010398\|Ga0126383_12851115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300010400\|Ga0134122_11360407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300010401\|Ga0134121_10951339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300012198\|Ga0137364_10814385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300012208\|Ga0137376_11545553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300012350\|Ga0137372_10626972	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300012354\|Ga0137366_10763830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300012392\|Ga0134043_1221440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300012404\|Ga0134024_1354553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	579	Open in IMG/M
3300012409\|Ga0134045_1317167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	547	Open in IMG/M
3300012532\|Ga0137373_10097111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2586	Open in IMG/M
3300012941\|Ga0162652_100082434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300012955\|Ga0164298_10729871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300012960\|Ga0164301_10838132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300012975\|Ga0134110_10487845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	559	Open in IMG/M
3300012977\|Ga0134087_10477015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300012986\|Ga0164304_10372120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300012987\|Ga0164307_10732617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300013100\|Ga0157373_11058304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300014150\|Ga0134081_10078720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1016	Open in IMG/M
3300018027\|Ga0184605_10380864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	633	Open in IMG/M
3300018431\|Ga0066655_11339067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300018433\|Ga0066667_10436999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300018433\|Ga0066667_10765639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	816	Open in IMG/M
3300018468\|Ga0066662_11220368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300018482\|Ga0066669_11296820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	659	Open in IMG/M
3300019279\|Ga0184642_1150298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300019356\|Ga0173481_10605889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	577	Open in IMG/M
3300019886\|Ga0193727_1153737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	622	Open in IMG/M
3300022694\|Ga0222623_10126163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300022756\|Ga0222622_10101055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300025899\|Ga0207642_10596598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300025914\|Ga0207671_11211074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	590	Open in IMG/M
3300025915\|Ga0207693_10091303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2388	Open in IMG/M
3300025915\|Ga0207693_10130605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1975	Open in IMG/M
3300025915\|Ga0207693_10964342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	652	Open in IMG/M
3300025922\|Ga0207646_10173566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1947	Open in IMG/M
3300025922\|Ga0207646_10219333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300025929\|Ga0207664_10066631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2887	Open in IMG/M
3300025930\|Ga0207701_10886615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	748	Open in IMG/M
3300025942\|Ga0207689_10731020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300025961\|Ga0207712_10811955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300025972\|Ga0207668_11235056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300026089\|Ga0207648_10589757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300026118\|Ga0207675_100353417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300027907\|Ga0207428_10362645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1065	Open in IMG/M
3300027909\|Ga0209382_11688519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300028380\|Ga0268265_10509248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300028711\|Ga0307293_10175512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300028714\|Ga0307309_10124183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300028716\|Ga0307311_10054098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300028719\|Ga0307301_10170607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300028791\|Ga0307290_10037724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1726	Open in IMG/M
3300028807\|Ga0307305_10095642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1372	Open in IMG/M
3300028828\|Ga0307312_10750872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300028876\|Ga0307286_10260917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	636	Open in IMG/M
3300028884\|Ga0307308_10338495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300031938\|Ga0308175_101674542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300031996\|Ga0308176_11268689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300033412\|Ga0310810_10738384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300033475\|Ga0310811_10533902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.61%
Host-Associated	Host-Associated	17.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.13%
Plants	Host-Associated → Plants	17.39%
Aquatic	Environmental → Aquatic	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Sediment	Environmental → Aquatic → Sediment	2.61%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.61%
Loam	Environmental → Terrestrial → Soil → Loam	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010073	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010121	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_10475062	2228664021	Soil	VIDRDRGTSVNTSFFANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILP
ICChiseqgaiiDRAFT_08610493	3300000033	Soil	VNTSFLANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVXTTLPAGTTDGTQNDVLVL
F24TB_118484021	3300000550	Soil	VKTSALENRRALFLTIALAGVLGIAVLALASAAHGGGTAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRIVTTLPTGTTDGTQNIVLVLSRVDISPRHSWYRVRLPILPNNKVGFVQARDLSSLFKVNTHLYIYKSSYTAVLKRNGKTVFKTR
AP72_2010_repI_A01DRAFT_10266822	3300000579	Forest Soil	MKTSALENRRTLLLTLALAGALGIALLALASAANGGAKARGLYPRTIKLTDDKIAHWAVLMRPAVVRTKPGLASRIITKLPAGTTDGTQNDVLVLSRIDISPRQSWYRVRLPILPNN
AF_2010_repII_A1DRAFT_100189991	3300000597	Forest Soil	MKTSALENRRTLLLTLALAGALGIALLALASAANGGAKARGLYPRTIKLTDDKIAHWAVLMRPAVVRTKPGLASRIITKLPAGTTDGTQNDVLVLSRIDISPRQSWYRVRLPILP
AP72_2010_repI_A100DRAFT_10064482	3300000837	Forest Soil	MKTSALENRRTLLLTLALAGALGIALLALASAANGGAKARGLYPRTIKLTDDKIAHWAVLMRPAVVRTKPGLASRIITKLPAGTTDGTQNDVLVLSRIDISPRQSWYRVRL
AP72_2010_repI_A001DRAFT_10059532	3300000893	Forest Soil	MKTSALENRRTLLLTLALAGALGIALLALASAANGGAKARGLYPRTIKLTDDKIAHWAVLMRPAVVRTKPGLASRIITKLPAGTTDGTQNDVLVLSRIDISPRQSWYRVRLPILPNNTLGYIQ
C688J35102_1188146651	3300002568	Soil	MLGASIALAGALVVALLSLASSAHGSANTGALYPRTIKLTDAKIAHWAVVMRPAVVRARPGLAERVITKLPTGTTDGTQNDVLVLSRTDISPSKSWYRVRLPILPNNS
Ga0066685_111327581	3300005180	Soil	VKTSALENRRALLLTIALAGALGIAVLALASAAHGGGKVQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVRPRDLSALFK
Ga0066678_104531272	3300005181	Soil	VTDRETGGVNKLNKSVSEHRPVLLSSIALAGAFAALMVLLLLAPAAHGGPATGALYPRTIKLTDAKVAHWAGVMKRAVVRAKPGLAAGIVTTLPTGTTDGTQNIVLVLARVDISPRQSWYRVRLPILPNNKIGYVQPRYLSSLFVVHT
Ga0070667_1014078531	3300005367	Switchgrass Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSAT
Ga0070701_113769911	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VNTPIVESRRTILACIALAGAVAIALLSLASVARGGDAKAQGAKTDALYPHSIKLTDGKTAHWAVLMRRTVVRAKPGLASRVITTLPTGTTDGTQNDVLVLSRIDLSPTSSWY
Ga0070705_1004498272	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNTSAFENRRKTLASIALAGALVLALLSLASAAHGGARTAALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLGARIVTTLPTGTTDGTQNDVLVLSRIDISPRQSWYLVRLPILPNNSTGFVRKSDLSPLFTVHTHLYINRGA
Ga0070694_1005197631	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VIDRDRGTSVNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQN
Ga0070708_1021553311	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VIDRDRGTSVNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNS
Ga0070706_1003083051	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VNTFVFENRRKTLASIALAGALVLALFSLASAAHGGARTAALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLGARIVTTLPTGTTDGTQNDVLVLS
Ga0070698_1003080281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGT
Ga0070695_1001011553	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VIDRDRGTSVNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISP
Ga0070704_1004933871	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VIDRDRGTSVNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGF
Ga0066695_105315921	3300005553	Soil	VTDRETGGVNKLNKSVSEHRPVLLSSIALAGAFAALMVLLLLAPAAHGGPATGALYPRTIKLTDAKVAHWAGVMKRAVVRAKPGLAAGIVTTLPTGTTDGTQNIVLVLARVDISPRQSWYRVRLPILPNNKIGYVQPRYLSSLFV
Ga0066698_104526201	3300005558	Soil	VKTSALENRRALLLTIALAGALGIGVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRILTTPPTGTTDRTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQSRDLSSLFKVNTHLYIYKNSYT
Ga0066670_106004681	3300005560	Soil	MLLLLLAPSARGGPATAALYPRTIKLTDGKVAHWAGVMKRAVVRAKPGLAARTVTTLPTGTTDGTQNIVLVLARVDISPHQSWYRVRLPILPNNKTGYVQPRYLSSLFVVNTHLYVDRGSLTATL
Ga0068855_1008989911	3300005563	Corn Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRS
Ga0066693_103779032	3300005566	Soil	VKTSALENRRALLLTIALAGVLGIAVLALASAAHGGGKVQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVRPRDLSALFKVNTHLYIYKSSYTAVLKRNGK
Ga0066694_103689442	3300005574	Soil	VNTSFFANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNS
Ga0066654_104745032	3300005587	Soil	VKTSALENRRALLLTIALAGALGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRILTTLPTGTTDRTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQSRDLSSLFKVNTHLYIYKNSY
Ga0066706_103648171	3300005598	Soil	VNTFVFENRRKTLASIALVGALALGLLSLASAAHGGARTAALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLGARIVTTLPTGTTDGTQNDVLVLSRIDISPRQSWYQ
Ga0066651_102247451	3300006031	Soil	LNTSVFEKRRMLVASIALAGAFGVALLSLASSAHGSANTAALYPRTTKLTDEKIAHWAVLMRPAIVRARPGLAERVITKLPKGTTDGTQNDVLVL
Ga0066651_106000461	3300006031	Soil	VKTSALENRRALRVTIYIAGALGIAVLALASAAHGGGKAQGVYPRTIKLTDDKVAHWGAVMRRAVVRTKPGLASSIVTTLPTGTTDGTQNIVLVLSRVDISPRQSWY
Ga0066656_101632961	3300006034	Soil	VKTSALENRRALLLTIALAGVLGIAVLALASAAHGGGKVQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVRPRDLSALFKVNTHLYIYKNSYTAVLKRNGKTVF
Ga0066656_111489052	3300006034	Soil	MNTSVFENRRTLLAGLSLAGALAVALLSLASAAHGSDNAAALYPRTIKLTDAKIAHWAVVMRPAVVRAKPGLASRVITKLPTGTTDGTQNDVLVLSRI
Ga0066652_1006791691	3300006046	Soil	VKTSALENRRALLLTIALAGALGIAVLALASAAHGGGKAQALYPRTIKLTDDKVAHWGAVMRRAVVRTNPGLASRIVTTLPTGTTDDTQNIVLVLSRVDISPRQSWYRVR
Ga0075432_104617201	3300006058	Populus Rhizosphere	LKTSALENRRALLVTIALAGLLGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFV
Ga0070712_1000750882	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSVSEHRPVLLSSIALAGAFAALVVLLLLAPAAQGGSAGAALYPRTIKLTDAKIARWAGVMKRAVVRTKPGLAAPIVTTLPTGTTDGTQNIVLVLARVDISPRQSWYEVRLPILPNNKIGYVQPRYLSGLFVVHTHLYVNRGSMTAT
Ga0070712_1011701452	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIDRDRGTSVNTSFFANRRALLALITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRS
Ga0079220_112344011	3300006806	Agricultural Soil	LKTSALENRRALLVTIALAGLLGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRASVYAQPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVRPRDLSALFKVNTHLYIYRSSYTAVLKRNGKTV
Ga0075429_1009826101	3300006880	Populus Rhizosphere	VKTSALESRRAFVAIIFLAGTLGIAVLALASAAHGGGKAQSLYPRTIKLTDDKVAHWGAVMRRAVVRTKPGLASRIVTTLPTGTGDGTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQTRDLSALFKVNTHLYIYKSSYTAVLKRNG
Ga0105245_106296922	3300009098	Miscanthus Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATLKRDGKVVFKTR
Ga0105242_125224931	3300009176	Miscanthus Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRS
Ga0105237_107095322	3300009545	Corn Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAHGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATLKRDGKVVF
Ga0105249_107835592	3300009553	Switchgrass Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAHGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHL
Ga0127429_1419961	3300010073	Grasslands Soil	LTIALAGALGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRILTTLPTGTTDRTQNIVLVLSRVDISPRQSWYRVRLPILPNNKIGFVQGRDLSSLFKVNTHLYIYKNSYTAVLKRNGKTVFKTRVGIGK
Ga0127451_10493711	3300010120	Grasslands Soil	LQVKTSALENRRRALLLTIALAGALGIAVLALASAAHGGGKTQGLYPRTIKLTDDKVAHWGAVMRRAVVRTKPGLGSSIVTTLPTGTTDDTQNIVLVLSRVDISPRQSWYQVRLPILPNNKIGFVQARDLSSLYKVNTHLYIYKSSYTAVLKRNGKTVFKTRVGIGKSYWPTPRGEYYI
Ga0127438_10695791	3300010121	Grasslands Soil	LQVKTSALENRRAFLLTIVLAGALGIAVLALASAAHGGGKAQALYPRTIKLTDDKVAHWGAVMRRAVVRTNPGLASRIVTTLPTGTTDGTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQSRELSSLFKVNTHLYIYKNSYTAVLKRNGKTVFKTRVGIGKSYWPTPRGEYYIRDKLTNF
Ga0134080_100864453	3300010333	Grasslands Soil	VNTSFFANRRALLASITLAGALAVAVLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVMTTLPAGTTDGT*
Ga0134062_101561571	3300010337	Grasslands Soil	VNTSFFANRGALLASITLAGALAVALLSLASAAHGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVL
Ga0134062_106622221	3300010337	Grasslands Soil	LTIALAGALGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLGSSIVTTLPTGTTDGTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQTRDLSSLYKVNTHLYIYKNSYTAVLKR
Ga0134066_100305482	3300010364	Grasslands Soil	VTIYIAGALGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRILTTLPTGTTDRTQNIVLVLSRVDISPRQSWYRV
Ga0126379_134119912	3300010366	Tropical Forest Soil	VNTSALENRRAFLLTIALAGALGIALLALASAAHGGSKAQGLYPRTIKLTDDKIAHWAVLMRPAVVHAKPGLASRVITTLPTGTTDGTQNNVLVLSRTDISPRQSWYQVRLPILPNNTI
Ga0134125_100645066	3300010371	Terrestrial Soil	VNTPIVESRRTILACIALAGAVAIALLSLASVARGGDAKAQGVKTDALYPHSVKLTDGKTAHWAVLMRRTVVRAKPGLASRVITTLPTGTTDGTQNDVLVLSRIDLSPTSSWYWVRLPIL
Ga0134128_123117431	3300010373	Terrestrial Soil	VNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRV
Ga0105239_130370331	3300010375	Corn Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDIS
Ga0126383_128511152	3300010398	Tropical Forest Soil	LLLLAGAAQGGARTAALYPRTIKLTDDKIAHWAVLMRPAMVYAKPVLSSRVITKLPTGTTDGTQNDVLVLSRTDISPRLSWYRVRLPILPNNTIGYIQTRDLSPLYSVN
Ga0134122_113604071	3300010400	Terrestrial Soil	VNTSFFANRRALLALITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNST
Ga0134121_109513392	3300010401	Terrestrial Soil	VNTSFFANRRALLALITLSGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGT
Ga0137364_108143852	3300012198	Vadose Zone Soil	MNTSVFENRKTLLAGLSLAGALAVALLSLASAAHGSDKAAALYPRTIKLTDAKIAHWAVVMRPAVVRAKPGLASRVITKLPTGTTDGTQNDVL
Ga0137376_115455532	3300012208	Vadose Zone Soil	LNKSISEHRPALLSSIALTGAFVVLMLLLLLAPSARGGPATAALYPRTIKLTDGKVAHWAGVMKRAVVRAKPGLAARTVTTLPTGTTDGTQNIVLVLARVDISPHQSWYRVRLPILPNNKTGYVQPRYLSTLFVVNTHLYVDR
Ga0137372_106269722	3300012350	Vadose Zone Soil	MNKSVSENRPILLSSIALAGAFAALVVALLSLAPPARGGCGSAALYPRTIKLTDDKIAHWAGVMRRAVVRSKPGLASRIVTTLPTGTTDGTQNIVLVLSRVDISPHQSWYRVRLPILPNNKVGYVQGR
Ga0137366_107638301	3300012354	Vadose Zone Soil	MNTSAFQNRRTLLTSIALAGAFAVALLTLASVAHGGGKAATLYPRSTKLTDDKIAHWAVLMRRTVVYAKPGLASRVVTTLPTGTTDGTQNDVLVLSRIDISPRSSWYWVRLPILPNNSTGWVQ
Ga0134043_12214401	3300012392	Grasslands Soil	VNTSFFANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTIVRAKPGLASRVMTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTS
Ga0134024_13545531	3300012404	Grasslands Soil	VTIYIAGALGIAVLALASAAHGGGKVQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVQTRDLSSLYKVNTHLYIYKNSYTAVLKRNGKTIFKTRVGIGKSYWPTPRGEYYIRDKL
Ga0134045_13171671	3300012409	Grasslands Soil	SDRVGGLQVKTSALENRRRALLLTIALAGALGIAVLALASAAHGGGKTQGLYPRTIKLTDDKVAHWGAVMRRAVVRTKPGLGSSIVTTLPTGTTDDTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQTRDLSSLYKVNTHLYIYKNSYSRPEAKREDDLQDAGRHRQELLADAAR
Ga0137373_100971115	3300012532	Vadose Zone Soil	VIDKDRGTSVNTSFFANRRALLASITLAGALAVAVLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVMTTLPAGTTDGTQNDVLVLSRIDI
Ga0162652_1000824342	3300012941	Soil	VNTSFFANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLY
Ga0164298_107298713	3300012955	Soil	LAGALTVALLSLASAAQGGSRASGLYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSRWYRVPLPLLPNNSTGFV*
Ga0164301_108381322	3300012960	Soil	VNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWHRVRLPILPNNS
Ga0134110_104878451	3300012975	Grasslands Soil	RVRGLQVKTSALENRRALLLTIALAGALGIGVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRILTTLPTGTTDRTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQSRDLSSLFKVNTHLYIYKNSYTAVLKRNGKTVFKTRVGIGKSYWPTPRGEYYIRDK
Ga0134087_104770151	3300012977	Grasslands Soil	LTIALAGVLGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRAVVRTKPGLASRILTTLPTGTTDRTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFVQSRDLSSL
Ga0164304_103721201	3300012986	Soil	VNTSFFANRRALIASITLAGALTVALLSLASAAQGGSRASGLYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATLKRDGKVVF
Ga0164304_114180642	3300012986	Soil	MNKSAADNRPTLLTSIALAGAFAALVVTLLSLAPPARGGSDSAALYPRTIKLTDDKIAHWAGVMKRAGVRSKPGLASSIVTTLPTGTSDDTQNIVLVLSRVDISPRQSWYRVRLPILPNNKV
Ga0164307_107326172	3300012987	Soil	VNTSFFANRRALIASITLAGALTVALLSLASAAQGGSRASGLYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLS
Ga0164305_102209402	3300012989	Soil	MNKSAAENRPTLLTSIALAGAFAALVVTLLSLAPPARGGSDSAALYPRTIKLTDNKIAHWAGVMKRAVVRSKPGLAASIVTTLPTGTTDDTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVG
Ga0157373_110583041	3300013100	Corn Rhizosphere	VNTPIVESRRTILACIALAGAVAIAVLSLASVALGGDAKAQGAKTDALYPRSIKLTDGKTAHWAVLMRRTVVRAKPGLASRVITTLPTGTTDGTQNDVLVLSRIDLSPSSSRCRVRLPLLPNDTTGFVRKRDLSPLFTVHTHLFINRGALTATLQRYGKVV
Ga0134081_100787201	3300014150	Grasslands Soil	MNTSVFENRRTLLAGLSLAGALAVALLSLASAAHGSDNAAALYPRTIKLTDAKIAHWAVVMRPAVVRAKPGLASRVITKLPTGTTDGTQNDVL
Ga0184605_103808641	3300018027	Groundwater Sediment	KLHWGGPVRGPPQATDRRPGDQMNKSASENRSILLASIALAGAVAALVVALLSLAPTARGGAGTSALYPRTIKLTDAKVAHWAGVMRRAVVRTKPSLASRIVTTLPTGTTDGTQNIVLVLSRVDISPHQSWYRVRLPILPNNKTGYVQRRNLSSLFIVHTHLYVNRGSLTATLKRNGKTVFKTRVGIGKSYWPTPPGEYYIRDKLTSFNNP
Ga0066655_113390671	3300018431	Grasslands Soil	VKTSALENRRALLLTIALAGVLGIAVLALASAAHGGGKVQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVRPRDLSA
Ga0066667_104369992	3300018433	Grasslands Soil	MLLLLLAPSARGGPATAALYPRTIKLTDGKVAHWAGVMKRAVVRAKPGLAARTVTTLPTGTTDGTQNILLVLARVDISPHQSWYRVRLPILPNNKTGYVQPRYLSSLFAVNTHLYV
Ga0066667_107656392	3300018433	Grasslands Soil	MNTSVFENRRTLLAGLSLAGALAVALLSLASAAHGSDNAAALYPRTIKLTDAKIAHWAVVMRPAVVRAKPGLASRVITKLPTGTTDGTQNDVLVLSRIDISPHQ
Ga0066662_112203682	3300018468	Grasslands Soil	VTDRETGGVNKLNKSVSEHRPVLLSSIALAGAFAALMVLLLLAPAAHGGPATGALYPRTIKLTDAKVAHWAGVMKRAVVRAKPGLAAGIVTTLPTGTTDGTQNIVLVLARVDISPHQSWYRVRLPILPNNKTGYVQPRDLSSLFVVNTHLYVDRGSLTATLKRNGKTVFKTS
Ga0066669_112968201	3300018482	Grasslands Soil	LNTSVFEKRRMLVASIALAGAFGVALLSLASSAHGSANTAALYPRTTKLTDEKIAHWAVLMRPAIVRARPGLAERVITKLPKGTTDGTQNDVLVLSRTDISPSKSWYRVRLPILPNNSVGYVQKRDLSPLFTVKTHLYIDRGRLTATLKRSGKVVFKTRVG
Ga0184642_11502981	3300019279	Groundwater Sediment	VIDRDRGTSVNTSFFVNRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYR
Ga0173481_106058891	3300019356	Soil	VIDRDRGTSVNTSFFANRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATLKRDGKVVFKTR
Ga0193727_11537371	3300019886	Soil	VNTSFFANRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVH
Ga0222623_101261632	3300022694	Groundwater Sediment	VNTSFFANRRVLLASITLAGVLAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVR
Ga0222622_101010553	3300022756	Groundwater Sediment	VNTSFFANRRVLLASITLAGVLAVALLSLASAAQGGSRAGALYPRSTKLTNDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPIL
Ga0207642_105965982	3300025899	Miscanthus Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSS
Ga0207671_112110741	3300025914	Corn Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAHGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLF
Ga0207693_100913032	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSVSEHRPVLLSSIALAGAFAALVVLLLLAPAAQGGSAGAALYPRTIKLTDAKIARWAGVMKRAVVRTKPGLAAPIVTTLPTGTTDGTQNIVLVLARVDISPRQSWYEVRLPILPNNKIGYVQPRYLSGLFVVHTHLYVN
Ga0207693_101306052	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNESASVNRPTLLTSIALAGAFAALVVALLSLAPPARGGSGSAALYPRTIKLTDSKIAHWAGVMRRAVVRSKPGLASRIVTTLPTGTTDDTQNIVLVLSRVDISPHQSWYRVRLPILPNNKVGYVQS
Ga0207693_109643421	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VNTSFFANRRALLALITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDL
Ga0207646_101735663	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNST
Ga0207646_102193331	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VNTSAFENRRKTLASIALAGALVLALLSLASAAHGGARTAALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLGARIVTTLPTGTTDGTQNDVLVLSRIDISPRQSWYLVR
Ga0207664_100666314	3300025929	Agricultural Soil	VNTPIVESRRTILACIALAGAVAIALLSLASVARGGDAKAQGVKTDALYPHSVKLTDGKTAHWAVLMRRTVVRAKPGLASRVITTLPTGTTDGTQNDVLVLSRIDLSPTS
Ga0207701_108866151	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VIDRDRGTSVNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATDARRVPSRSGAAGPARRRTGSGMDT
Ga0207689_107310201	3300025942	Miscanthus Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTD
Ga0207712_108119552	3300025961	Switchgrass Rhizosphere	VNTSFFANRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATLKR
Ga0207668_112350561	3300025972	Switchgrass Rhizosphere	VNTSFFGNRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLP
Ga0207648_105897571	3300026089	Miscanthus Rhizosphere	VNTSFFANRRALLALITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLF
Ga0207675_1003534171	3300026118	Switchgrass Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAHGGSRASALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVL
Ga0207428_103626451	3300027907	Populus Rhizosphere	VTIALAGLLGIAVLALASAAHGGGKAQGLYPRTIKLTDDKVAHWAGVMRRASVYAKPGLASRVITKLPTGTSDSTQNIVLVLSRVDVSPRQSWYQVRLPILPNNKVGFVRPRDL
Ga0209382_116885192	3300027909	Populus Rhizosphere	VKTSALESRRAFVAIIFLAGTLGIAVLALASAAHGGGKAQSLYPRTIKLTDDKVAHWGAVMRRAVVRTKPGLASRIVTTLPTGTGDGTQNIVLVLSRVDISPRQSWYRVRLPILPNNKVGFV
Ga0268265_105092482	3300028380	Switchgrass Rhizosphere	VNTAFFANRRALLASITLAGALTVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSR
Ga0307293_101755121	3300028711	Soil	VNTSFFVNRRALLASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHTHLYINRGATSATLKRDGKVVFKTRV
Ga0307309_101241831	3300028714	Soil	VIDRDRGTSVNTSFFANRRALLASITLAGALAVALLSVASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWY
Ga0307311_100540982	3300028716	Soil	VNTSFFANRRVLLASITLAGVLAVALLSLASAAQGGSRAGALYPRSTKLTNDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFV
Ga0307301_101706071	3300028719	Soil	VIDRDRGTSVNTSFFANRRVLLASITLAGVLAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSLIDISPRSSWYRVRLPILPNNSTGFVRK
Ga0307290_100377243	3300028791	Soil	VNTSFFANRRALLASITLAGALAVALLSVASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTV
Ga0307305_100956421	3300028807	Soil	VIDRDRGTSVNTSFFANRRALLASITLAGALAVALLSVASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILP
Ga0307312_107508721	3300028828	Soil	VIDRDRGTSVNTSFFANRRALLASITLAGALTVALLSLASAAQGGSRAGALYPRSTKLTDEKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRL
Ga0307286_102609171	3300028876	Soil	VNTSFFANRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDISPRSSWYRVRLPILPNNSTGFVRKRDLSPLFTVHT
Ga0307308_103384952	3300028884	Soil	VNTSFFANRRALASITLAGALAVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRVVTTLPAGTTDGTQNDVLVLSRIDIS
Ga0308175_1016745422	3300031938	Soil	LNTSVFEKHRMLVASIALAGAFGVALLSLASSAHGSANTAALYPRTTKLTDDKIAHWAVLMRPAIVRARPGLAERAITKLPTGTTDGTQNDVL
Ga0308176_112686892	3300031996	Soil	LNTSVFEKHRMLVASIALAGAFGVALLSLASSAHGSANTAALYPRTTKLTDEKIAHWAVLMRPAIVRARPGLAERVITKLPKGTTDG
Ga0310810_107383841	3300033412	Soil	VNTSFFANRRALLASITLAGALTVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSRIDISPRSSW
Ga0310811_105339022	3300033475	Soil	VIDRDRGTSVNTSFFANRRALLASITLAGALTVALLSLASAAQGGSRAGALYPRSTKLTDDKVAHWAVLMRRTVVRAKPGLASRIVTTLPAGTTDGTQNDVLVLSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080332

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences