Metagenome / Metatranscriptome Family F080202

Overview

Basic Information

• Family ID: F080202
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 115
• Average Sequence Length: 68 residues
• Representative Sequence: VTSAESDYLLRLAALSLSFVGFSSVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALVPTLLNL
• Number of Associated Samples: 103
• Number of Associated Scaffolds: 115

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 91.30 %
• % of genes near scaffold ends (potentially truncated): 98.26 %
• % of genes from short scaffolds (< 2000 bps): 93.91 %
• Associated GOLD sequencing projects: 98
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (91.304 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (12.174 % of family members)
• Environment Ontology (ENVO): Unclassified (42.609 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (32.174 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 58.95%
  β-sheet: 0.00%
  Coil/Unstructured: 41.05%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF05656	DUF805	8.70
PF09966	DUF2200	4.35
PF08450	SGL	3.48
PF12833	HTH_18	2.61
PF04392	ABC_sub_bind	1.74
PF03473	MOSC	1.74
PF01740	STAS	1.74
PF02321	OEP	1.74
PF05988	DUF899	0.87
PF02653	BPD_transp_2	0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	8.70
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	3.48
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	3.48
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	3.48
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.74
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.87
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.87
COG3545	Predicted esterase of the alpha/beta hydrolase fold	General function prediction only [R]	0.87
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.87

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.30 %
Unclassified	root	N/A	8.70 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.30 %
Unclassified	root	N/A	8.70 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.30 %
Unclassified	root	N/A	8.70 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.43 %
Unclassified	root	N/A	8.70 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	44.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.35 %
Unclassified	root	N/A	8.70 %

Level 6

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	40.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	8.70 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.74 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.61 %

Level 7

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	33.91 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	8.70 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.87 %

Level 8

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Luteimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas	0.87 %
Quisquiliibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium	0.87 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	0.87 %
Unclassified	root	N/A	8.70 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.87 %

Level 9

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Luteimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas	0.87 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	0.87 %
Rhodoferax ferrireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax ferrireducens	0.87 %
Unclassified	root	N/A	8.70 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.87 %

Level 10

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Luteimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas	0.87 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	0.87 %
Rhodoferax ferrireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax ferrireducens	0.87 %
Unclassified	root	N/A	8.70 %
Variovorax sp. KK3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. KK3	0.87 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001842|RCM30_1060463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1096
3300003994|Ga0055435_10271074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	503
3300004156|Ga0062589_100496751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1027
3300004157|Ga0062590_102290452	Not Available	568
3300004463|Ga0063356_105458138	Not Available	546
3300004780|Ga0062378_10210290	All Organisms → cellular organisms → Bacteria	545
3300005093|Ga0062594_100853963	All Organisms → cellular organisms → Bacteria → Proteobacteria	851
3300005206|Ga0068995_10098776	All Organisms → cellular organisms → Bacteria	591
3300005330|Ga0070690_101191772	All Organisms → cellular organisms → Bacteria	607
3300005344|Ga0070661_101192707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	636

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	5.22%
Environmental	Environmental	66.96%
Host-Associated	Host-Associated	27.83%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	19.13%
Bioremediation	Engineered → Bioremediation	0.87%
Plants	Host-Associated → Plants	27.83%
Terrestrial	Environmental → Terrestrial	47.83%
Wastewater	Engineered → Wastewater	4.35%

Category

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	4.35%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%
Freshwater	Environmental → Aquatic → Freshwater	13.04%
Marine	Environmental → Aquatic → Marine	1.74%
Metal	Engineered → Bioremediation → Metal	0.87%
Peat	Environmental → Terrestrial → Peat	1.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.26%
Roots	Host-Associated → Plants → Roots	0.87%
Sediment	Environmental → Aquatic → Sediment	4.35%
Soil	Environmental → Terrestrial → Soil	45.22%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.74%
Loam	Environmental → Terrestrial → Soil → Loam	1.74%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.22%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.09%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.74%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.87%

Habitat

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	2.61%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.61%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.74%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.61%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.74%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.74%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001842	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM30, ROCA_DNA203_0.2um_MCP-S_C_2b	Environmental
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM30_10604633	3300001842	Marine Plankton	MLAASNQDMIVPPAESDYLLRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGL
Ga0055435_102710741	3300003994	Natural And Restored Wetlands	VTSAESDYLLRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALIPTLLNLLHIPPTVTWPLS
Ga0062589_1004967512	3300004156	Soil	VTAADSDYLIRLASLSLSFVGFSSVVVTLRGALGGELSERHVRLVRLYIEGG
Ga0062590_1022904522	3300004157	Soil	VTPAESEYLLCLAALSLSFVGFSAIVVTLRGALGGELSPRHIRLVCLYIEGGLLVTVLSLAP
Ga0063356_1054581381	3300004463	Arabidopsis Thaliana Rhizosphere	VTPGESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSERHLRLVRLYIEGGFVVTALALVPAL
Ga0062378_102102901	3300004780	Wetland Sediment	VTSVESDYLLRLASLSLSFVGFSAVVVTLRGALGGELGDRHIRLVRLYIEGGFLVT
Ga0062594_1008539633	3300005093	Soil	VTPAESDYLLRLAALSLSFVGFSAVVVTLRGALGGKLSERHLRLVRLYIEGGLLVTALALVPTL
Ga0068995_100987762	3300005206	Natural And Restored Wetlands	VTSAESDYLLRLASLSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALVP
Ga0070690_1011917721	3300005330	Switchgrass Rhizosphere	VTPAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLITLLALVPALLNLLHVPDAVTWPLSSAA
Ga0070661_1011927071	3300005344	Corn Rhizosphere	VTTRLRRQPILNEHAFVTSTESDYLFHLSGLSLSFVGFSAIVVTLRGALEGKLSDRHLRLVRLYIEGGFLITALALVPSLLNL
Ga0070674_1020560102	3300005356	Miscanthus Rhizosphere	VTSVESDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGGFLVT
Ga0070685_114270812	3300005466	Switchgrass Rhizosphere	VTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALAPTMLDLLGVTPAVTWPLSSAI
Ga0068853_1016217062	3300005539	Corn Rhizosphere	VTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLDLLHIP
Ga0068857_1008498871	3300005577	Corn Rhizosphere	VTSNESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALAL
Ga0079037_1021953462	3300006224	Freshwater Wetlands	VTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVT
Ga0068871_1022932001	3300006358	Miscanthus Rhizosphere	VTSIESDYLLRLAGLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTL
Ga0074053_119207781	3300006575	Soil	VTPAESDFLLRLASLSLSFVGFSAVVVSLRGALGGELSDQHLRLVRLYIEGGLLVTALGLVPTLLNLLHISESVTW
Ga0075425_1011048902	3300006854	Populus Rhizosphere	VTAAESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALLPTLLNLL
Ga0075434_1019774951	3300006871	Populus Rhizosphere	VRGSAFCQADTAFRDGTIVTSAESGYLSSLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRFYIEGGLLLVALALVPRLLELLHFTDIVAWRV
Ga0079216_110778491	3300006918	Agricultural Soil	VTSPEYDYLLRLATLSLSFVGFSAVVVTLRGALGGELSERHLRLVRLYIEGGFIVTAL
Ga0079218_110398681	3300007004	Agricultural Soil	VTSAESDYLFRLATLSLSFVGFSAVVVTLRGALGGDLSDRHLRLVRLYIEGGLLVTALAL
Ga0079218_128408711	3300007004	Agricultural Soil	MFHEGTIVTPGESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEG
Ga0075435_1011925001	3300007076	Populus Rhizosphere	VTPTESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGMLVTALALVP
Ga0099777_14622532	3300007324	Activated Sludge	MAPAESGYILHLSSLSLTFVGFSALVVTLRSTLGGDLSDRHLRLVRLYIEGGLLLTALALVPT
Ga0105099_109767011	3300009082	Freshwater Sediment	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTAL
Ga0102851_129155961	3300009091	Freshwater Wetlands	VTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFL
Ga0105094_103672422	3300009153	Freshwater Sediment	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEG*
Ga0111538_125915592	3300009156	Populus Rhizosphere	VTSGESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLVVTALALVPALLHLLQVPDAITWPLSS
Ga0113563_109163391	3300009167	Freshwater Wetlands	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPA
Ga0073899_102080332	3300009540	Activated Sludge	VTPAESDYLFRLAALSLSFVGFSAIVVSLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNVLQVPGTVIWPLS*
Ga0105249_124892011	3300009553	Switchgrass Rhizosphere	VTSADSDYLIRPAALSLSCVGFSRVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALAL
Ga0105249_125295871	3300009553	Switchgrass Rhizosphere	VTSAESDYLVQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHIPDTVTWPLS
Ga0131092_101912301	3300009870	Activated Sludge	LTPAESDYLFRLASLSLSFVGFSAVVVTLRGALKGEIADRHLRLVRLYIEGGLLVTTLALVPTLLNLLHVP
Ga0131092_106984271	3300009870	Activated Sludge	VTPAESDYLLRLAALSLSFVGFSAVVVTLRGALRGELADRHLRLVRLYIEGGFLVTTLALVPTLLN
Ga0131092_111776321	3300009870	Activated Sludge	VTPPESDYLFRLASLSLSFVGFSAVVVTLRGALKGEIADRHLRLVRLYIEGGLLVTTLALVPTLLNLLHVPDAVTW
Ga0126377_115196672	3300010362	Tropical Forest Soil	VTSAESDYLLRLAALSLSFVGFSSVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALVPTLLNL
Ga0134121_100485161	3300010401	Terrestrial Soil	LIDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALAPTMLDLLGVTPAVTW
Ga0134121_108921341	3300010401	Terrestrial Soil	MSGHTYEHAIVTPAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGL
Ga0137313_10664561	3300011403	Soil	MTSGESDYLLRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLV
Ga0137425_11637392	3300011422	Soil	VTPAESDFLLRLAALSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALGLVPTLLNLLHVP
Ga0137429_12043342	3300011437	Soil	MTPAESDFLLRLAALSLSFVGFSAVVVTLRGALGGELSVRHLRLVRLYIEGGLLVTVLGLVPTLLDLLHVPESVMWRVA
Ga0157293_103233662	3300012898	Soil	SLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLDLLHIPDIVTWPLSSAAAASILPSYS*
Ga0157289_103146301	3300012903	Soil	LVDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVR
Ga0157282_101853091	3300012904	Soil	VTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALVPTMLDLLGVTPAVTWPL
Ga0157283_102164162	3300012907	Soil	LVDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTAL
Ga0163162_134141191	3300013306	Switchgrass Rhizosphere	MTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLV
Ga0157372_101344961	3300013307	Corn Rhizosphere	VTSTESDYLFHLSGLSLSFVGFSAIVVTLRGALEGKLSDRHLRLVRLYIEGGFLITALALVPSL
Ga0157375_102187861	3300013308	Miscanthus Rhizosphere	LVDPSRQEPAAVTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALV
Ga0157380_131088882	3300014326	Switchgrass Rhizosphere	LADPSRQEPAAVTSVESDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGGFLV
Ga0180078_10314811	3300014865	Soil	VTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELANRHLRLVRLYIEGGFLVTALALVPTLLNLLHIPDTVTWPL
Ga0157379_102226363	3300014968	Switchgrass Rhizosphere	VTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLDL
Ga0173483_107224072	3300015077	Soil	VTSPESDYLFRLATLSLSFVGFSAVVVTLRGALKGELADRHLRLVRLYIEGGLLVTALAVLPTLL
Ga0173480_104924971	3300015200	Soil	VTSAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRMYIEGGLLVTALALVPSLLNFL
Ga0132255_1003988464	3300015374	Arabidopsis Rhizosphere	VTPAESDFLLRLAALALSFVGFSAIVVTLRGALGGKLAERHLRFVRLYIEGGLVVTALGLVPTLLNLLHVPEPVI
Ga0190271_110068292	3300018481	Soil	VTPAESDYLLRLAALSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLRIPHTVT
Ga0210380_102402531	3300021082	Groundwater Sediment	VTSPESDYLFRLATLSLSFVGFSAVVVTLRGALKGELADRHLRLVRLYIEGGLLVTALAVLPTLLNLLHIR
Ga0182009_104870152	3300021445	Soil	VTPAESDYLARLASLALSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPSLLSL
Ga0194061_11934941	3300021601	Anoxic Zone Freshwater	VEPAESDYLFRLATLSLSFVGFSSVVVALRGALGGELSDRHLRLVRLYIEGGLLVTALAVFPTLLN
Ga0207649_103296393	3300025920	Corn Rhizosphere	VTAAESDYLLRLASLSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALIPTLLNLLHVAPPVTWPVSSAAA
Ga0207649_115255852	3300025920	Corn Rhizosphere	VTSTESDYLFHLSGLSLSFVGFSAIVVTLRGALEGKLSDRHLRLVRLYIEGGFLITALALVPSLLNL
Ga0207650_105624261	3300025925	Switchgrass Rhizosphere	MTSGESDYLLRLAGLSLSFVGFSVVVVTLRGALGGELSDRHLRLVRLYIEGGLLTTALA
Ga0207687_106196391	3300025927	Miscanthus Rhizosphere	VTPAESDYLGRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPSLLELLHVTETALWRSA
Ga0207701_103004671	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELSNRHLRLVRLYIEGGLLVTALA
Ga0207644_113490542	3300025931	Switchgrass Rhizosphere	VTSADSDYLIRLASLSLSFVGFSSVVVTLRGALGGALSERHVRLVRLYIEGGFLVTALALVPTMLDLLGVAPAVTW
Ga0207686_114463241	3300025934	Miscanthus Rhizosphere	MSGHTYEHAIVTPAESDYLSQLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLVTALALAPKLLNLLN
Ga0207669_112462232	3300025937	Miscanthus Rhizosphere	VTSVESDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGGFLVTALALAPTMLDLLGVTPAVTWP
Ga0207704_100520281	3300025938	Miscanthus Rhizosphere	VTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGALLVTA
Ga0207712_120508102	3300025961	Switchgrass Rhizosphere	VTSAEPDYLIRLASLSLSFVGFSSVVVTLRGALGGQLSERHVRLVRLYIEGG
Ga0207641_100294101	3300026088	Switchgrass Rhizosphere	VTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLDLLHIPDIVTWPLSSAA
Ga0207675_1006734493	3300026118	Switchgrass Rhizosphere	VTSTESDYLFRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLFNLV
Ga0207683_118776281	3300026121	Miscanthus Rhizosphere	VTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALALVPTLLNLLH
Ga0208637_10272771	3300027401	Soil	VTPAESDFLLRLASLSLSFVGFSTVVVSLRGALGGELSDQHLRLVRLYIEGGLLVTALGLVPTLLNLLHISESVTWPVSS
Ga0208685_11386261	3300027513	Soil	VTSAESDYLLRLASLSLSFVGFSAVVVTLRSALGGELANRHLRLVRLYIEGGFLVTALALVPTLLNLLHVPDTIT
Ga0209819_101864621	3300027722	Freshwater Sediment	MDTTAIDYLLRLAALSISFVGFATIVVTLRRGLGGELSPFHLLLVRVYIEIGLIVAVGAIIPTLLNLFTLPN
Ga0209261_101896462	3300027735	Wetland Sediment	VTSVESDYLLRLASLSLSFVGFSAVVVTLRGALGGELGDRHIRLVRLYIEGGFLVTTL
Ga0209397_105034311	3300027871	Wetland	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLV
Ga0209450_109600362	3300027885	Freshwater Lake Sediment	VTSADSDYLLRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNL
Ga0209496_102052672	3300027890	Wetland	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPAVLDLLRLSESLT
Ga0209253_104692361	3300027900	Freshwater Lake Sediment	VTSAESDFLLSLAALSLSFVGFSAVVVTLRGALGGEISDRHLRLVRLYIEGGLIV
Ga0209382_103492401	3300027909	Populus Rhizosphere	LPDEKGSPMVTPGESDYLLRLATLSLSFVGFSSVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALALIPTLLNLLHVRETVVWPLSS
Ga0268265_110337631	3300028380	Switchgrass Rhizosphere	VTSAESDYLFQLAGLSLSFVGFSAVVVTLRGALGGKLTDRHLRLVRLYIEGGLLVTALA
Ga0247818_112759061	3300028589	Soil	MTSAESDYLLRLAGLSFSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTTLAIVPTLLNLLHVPDTITWPLSS
Ga0247822_118589041	3300028592	Soil	MVPEYDYLLRLATLSLSFVGFSAVVVTLRGGLGGKLSARHLRLVRLYIEGGFIVTALALVPTLLNVLR
Ga0247824_103481612	3300028809	Soil	VTSPESDYLLRIATLSLSFVGFSAVVVTLRGALGGELSERHLRLVRLYIEGGFIVTALALLPT
Ga0247825_110280231	3300028812	Soil	VTSAESDYLFRLASLSLSFVGFSAVVVTLRGALGGKLSDRHLRLVRLYIEGGLLVTALAL
Ga0247825_114536351	3300028812	Soil	VTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGQLANRHLRLVRLYIEGGFLVTALAIVPAL
Ga0307498_103775291	3300031170	Soil	VTPAESDFLLRLASLSLSFVGFSAVVVSLRGALGGELSDQHLRLVRLYIEGGLLVTALGLVPTLLNLLHIPESV
Ga0307497_102964482	3300031226	Soil	VTSAESDYLFRLATLSLSFVGFSAVIVTLRGALGGELSDRHVRLVRLYIEGGLLVTALALFP
Ga0302323_1017494872	3300031232	Fen	VTSAESDYLFRVATLSLSFVGFSSVVVALRGALGGDLSDRHLRLVRLYIEGGLLVTALALVPTLLDILHVRDTVT
Ga0307505_105327451	3300031455	Soil	VTSAESDYLFRLATLSLSFVGFSAVVVTLRGALGGELSARHLRLVRLYIEGGFLV
Ga0310888_110335391	3300031538	Soil	MTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLL
Ga0310886_102539383	3300031562	Soil	VTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELANRHLRLVRLYIEGGFLVTTLAIVPTLLNLLHVPDTITWPLSSAI
Ga0302322_1027867081	3300031902	Fen	VTTAESDYLFHLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPT
Ga0310884_105404331	3300031944	Soil	MTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHIPDAVTWP
Ga0310903_102960511	3300032000	Soil	MRPNNSFTPREHAIMTSAESDYLMRLASLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPT
Ga0310897_107212041	3300032003	Soil	VTSAESDYLLRLASLSLSFVGFSAVVVSLRGALGGELANRHLRLVRLYIEGGFLVTTLAIVPTL
Ga0310906_106512651	3300032013	Soil	VTSTESDYLFRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLFNLVHVPGTVIWPLSSAA
Ga0315912_106772612	3300032157	Soil	VTPAESDYLLRLATLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHVPGTV
Ga0316604_101428051	3300033406	Soil	VTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPA
Ga0316604_104197352	3300033406	Soil	VTPAESDYLLRLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVP
Ga0316603_107819022	3300033413	Soil	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPAVLD
Ga0316603_121740571	3300033413	Soil	VTSAESDFLLCLAALALSFTGFSAVVVTLRSALGGEISDRHLRLVRLYIEGGLIVTALALIPTLLNVLHVSAFVIWTVSS
Ga0316619_115617832	3300033414	Soil	MTSAESDYLLHLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVP
Ga0316619_117419702	3300033414	Soil	VTSAESDYLFRLAALSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLDLLHVPDTVIWR
Ga0316622_1012689932	3300033416	Soil	VTPAESDYLLRLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLNLLHAPGTVTWPA
Ga0316622_1023818221	3300033416	Soil	VTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALTLMPAVLDLLRLSESL
Ga0316622_1031115851	3300033416	Soil	VTSAESAFLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVT
Ga0316625_1026006721	3300033418	Soil	MTPAESDYLLRLAGLSLSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFLVTALAL
Ga0316601_1004351011	3300033419	Soil	VTPAESDYLLRLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGRLVTALALVPTLLNLLHAPGTV
Ga0316627_1026409272	3300033482	Soil	VTSAESAYLLGLAGLSLSFVGFSSVVVTLRGALGGEISERHLRLVRLYIEGGFLVTALALMPAVLDLLRLSESLTWRLSSAA
Ga0316629_101687292	3300033483	Soil	MTSAESDYLLHLAALSLSLVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGLLVTALALVPTLLDLLQIPGAVTWPLSSGA
Ga0316616_1002436683	3300033521	Soil	VTSAESDFLLCLAALSLSFTGFSAVVVTLRSALGGEISDRHLRLVRLYIEGGLIVTALALIPTLLNVLHVSA
Ga0247830_102126133	3300033551	Soil	MTSAESDYLLRLAGLSFSFVGFSAVVVTLRGALGGELSDRHLRLVRLYIEGGFL
Ga0364927_0083032_3_191	3300034148	Sediment	MPRGREVTPAESDFLLRLAALSLSFVGFSAIVVTLRGALGGELSDRHLRLVRLYIEGGLLVTA
Ga0373916_0081990_289_510	3300034894	Sediment Slurry	MTSAESDYLLRLASLSLSFVGFSAVVVTLRGALGGELANRHLRLVRLYIEGGFLVTTLALVPTLLNLLHVPDTI