NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080156

Metagenome / Metatranscriptome Family F080156

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080156
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 50 residues
Representative Sequence MNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIP
Number of Associated Samples 69
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 67.83 %
% of genes near scaffold ends (potentially truncated) 93.91 %
% of genes from short scaffolds (< 2000 bps) 93.04 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (62.609 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean
(41.739 % of family members)
Environment Ontology (ENVO) Unclassified
(84.348 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(78.261 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.39%    β-sheet: 0.00%    Coil/Unstructured: 48.61%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF137592OG-FeII_Oxy_5 1.74
PF01521Fe-S_biosyn 0.87
PF136402OG-FeII_Oxy_3 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 0.87
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 0.87


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A62.61 %
All OrganismsrootAll Organisms37.39 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000947|BBAY92_10077353Not Available893Open in IMG/M
3300000947|BBAY92_10113271Not Available719Open in IMG/M
3300000973|BBAY93_10152078Not Available582Open in IMG/M
3300002231|KVRMV2_100230541Not Available663Open in IMG/M
3300002231|KVRMV2_100366725All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium846Open in IMG/M
3300002231|KVRMV2_100664122All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium668Open in IMG/M
3300002511|JGI25131J35506_1011995Not Available1194Open in IMG/M
3300006308|Ga0068470_1049941Not Available876Open in IMG/M
3300006318|Ga0068475_1142695All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium546Open in IMG/M
3300006324|Ga0068476_1137431Not Available1008Open in IMG/M
3300006324|Ga0068476_1404068Not Available585Open in IMG/M
3300006336|Ga0068502_1525700All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium680Open in IMG/M
3300006336|Ga0068502_1560076Not Available615Open in IMG/M
3300006738|Ga0098035_1122687All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300006753|Ga0098039_1198482Not Available680Open in IMG/M
3300006753|Ga0098039_1321309Not Available516Open in IMG/M
3300006754|Ga0098044_1288136Not Available630Open in IMG/M
3300006924|Ga0098051_1174728Not Available564Open in IMG/M
3300006926|Ga0098057_1030596Not Available1339Open in IMG/M
3300006927|Ga0098034_1187602Not Available578Open in IMG/M
3300007283|Ga0066366_10567669Not Available506Open in IMG/M
3300007758|Ga0105668_1011311All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium727Open in IMG/M
3300007963|Ga0110931_1212811All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium576Open in IMG/M
3300008216|Ga0114898_1025264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED82028Open in IMG/M
3300008216|Ga0114898_1035923Not Available1635Open in IMG/M
3300008216|Ga0114898_1042614All Organisms → Viruses → Predicted Viral1473Open in IMG/M
3300008217|Ga0114899_1018873All Organisms → Viruses → Predicted Viral2697Open in IMG/M
3300008217|Ga0114899_1069302Not Available1225Open in IMG/M
3300008217|Ga0114899_1131795Not Available824Open in IMG/M
3300008217|Ga0114899_1145440Not Available774Open in IMG/M
3300008217|Ga0114899_1231975Not Available575Open in IMG/M
3300008218|Ga0114904_1105751Not Available682Open in IMG/M
3300008219|Ga0114905_1072987Not Available1225Open in IMG/M
3300008219|Ga0114905_1165460Not Available729Open in IMG/M
3300008219|Ga0114905_1279452Not Available517Open in IMG/M
3300008220|Ga0114910_1023264All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris2148Open in IMG/M
3300008220|Ga0114910_1119074Not Available773Open in IMG/M
3300008417|Ga0115363_10077859Not Available519Open in IMG/M
3300009173|Ga0114996_10888274All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium639Open in IMG/M
3300009173|Ga0114996_11063911All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium572Open in IMG/M
3300009409|Ga0114993_11148585All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium548Open in IMG/M
3300009409|Ga0114993_11305772All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium508Open in IMG/M
3300009414|Ga0114909_1044523All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris1333Open in IMG/M
3300009418|Ga0114908_1074994All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon1165Open in IMG/M
3300009418|Ga0114908_1100465Not Available968Open in IMG/M
3300009418|Ga0114908_1219262Not Available586Open in IMG/M
3300009481|Ga0114932_10785094Not Available552Open in IMG/M
3300009602|Ga0114900_1074697Not Available975Open in IMG/M
3300009602|Ga0114900_1103870Not Available776Open in IMG/M
3300009604|Ga0114901_1055445All Organisms → Viruses → Predicted Viral1351Open in IMG/M
3300009604|Ga0114901_1055765All Organisms → Viruses → Predicted Viral1346Open in IMG/M
3300009604|Ga0114901_1135773Not Available748Open in IMG/M
3300009605|Ga0114906_1062332All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris1396Open in IMG/M
3300009605|Ga0114906_1083231Not Available1168Open in IMG/M
3300009619|Ga0105236_1055324Not Available534Open in IMG/M
3300009620|Ga0114912_1131171Not Available590Open in IMG/M
3300009703|Ga0114933_10291155All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1085Open in IMG/M
3300009786|Ga0114999_10043855All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED1234157Open in IMG/M
3300010150|Ga0098056_1225739Not Available623Open in IMG/M
3300010155|Ga0098047_10345406Not Available559Open in IMG/M
3300010155|Ga0098047_10382500Not Available528Open in IMG/M
3300010883|Ga0133547_10062284All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium8594Open in IMG/M
3300011013|Ga0114934_10342381All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium670Open in IMG/M
3300011013|Ga0114934_10468671Not Available558Open in IMG/M
3300011013|Ga0114934_10558277All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium505Open in IMG/M
3300017775|Ga0181432_1183702Not Available652Open in IMG/M
3300017775|Ga0181432_1202090Not Available623Open in IMG/M
3300017775|Ga0181432_1281961All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium526Open in IMG/M
3300020444|Ga0211578_10385963Not Available582Open in IMG/M
3300020447|Ga0211691_10282679All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium654Open in IMG/M
3300021087|Ga0206683_10464358All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium627Open in IMG/M
3300021791|Ga0226832_10144004Not Available901Open in IMG/M
3300021791|Ga0226832_10280470All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium674Open in IMG/M
3300021791|Ga0226832_10539110Not Available507Open in IMG/M
(restricted) 3300024517|Ga0255049_10109954All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1251Open in IMG/M
(restricted) 3300024518|Ga0255048_10228527All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium905Open in IMG/M
(restricted) 3300024520|Ga0255047_10004962All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium7959Open in IMG/M
(restricted) 3300024520|Ga0255047_10443209Not Available654Open in IMG/M
(restricted) 3300024520|Ga0255047_10568464All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium568Open in IMG/M
3300025052|Ga0207906_1029428All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium757Open in IMG/M
3300025066|Ga0208012_1067725Not Available503Open in IMG/M
3300025109|Ga0208553_1041499Not Available1157Open in IMG/M
3300025109|Ga0208553_1082360Not Available761Open in IMG/M
3300025251|Ga0208182_1010795Not Available2560Open in IMG/M
3300025251|Ga0208182_1055812Not Available803Open in IMG/M
3300025251|Ga0208182_1060862All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris754Open in IMG/M
3300025251|Ga0208182_1062023Not Available743Open in IMG/M
3300025251|Ga0208182_1066212Not Available709Open in IMG/M
3300025264|Ga0208029_1008882All Organisms → Viruses → Predicted Viral2919Open in IMG/M
3300025264|Ga0208029_1077582Not Available636Open in IMG/M
3300025264|Ga0208029_1103305Not Available514Open in IMG/M
3300025267|Ga0208179_1033406Not Available1267Open in IMG/M
3300025267|Ga0208179_1097325Not Available585Open in IMG/M
3300025270|Ga0208813_1076194Not Available698Open in IMG/M
3300025274|Ga0208183_1080401Not Available613Open in IMG/M
3300025277|Ga0208180_1040630All Organisms → Viruses → Predicted Viral1250Open in IMG/M
3300025277|Ga0208180_1103952Not Available627Open in IMG/M
3300025282|Ga0208030_1030536All Organisms → Viruses → Predicted Viral1674Open in IMG/M
3300025282|Ga0208030_1064496All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon998Open in IMG/M
3300025286|Ga0208315_1034220All Organisms → Viruses → Predicted Viral1447Open in IMG/M
3300025286|Ga0208315_1116847Not Available619Open in IMG/M
3300025293|Ga0208934_1014747Not Available1663Open in IMG/M
3300025293|Ga0208934_1093133Not Available517Open in IMG/M
3300025301|Ga0208450_1034378Not Available1338Open in IMG/M
3300025305|Ga0208684_1127313Not Available614Open in IMG/M
3300025873|Ga0209757_10191161Not Available647Open in IMG/M
3300026115|Ga0208560_1015728Not Available680Open in IMG/M
3300026115|Ga0208560_1017611Not Available650Open in IMG/M
3300027838|Ga0209089_10669120All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium537Open in IMG/M
3300028022|Ga0256382_1169726Not Available522Open in IMG/M
3300031623|Ga0302123_10310068Not Available757Open in IMG/M
3300031886|Ga0315318_10771034Not Available537Open in IMG/M
3300032006|Ga0310344_10448246All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1107Open in IMG/M
3300032278|Ga0310345_11724615All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium611Open in IMG/M
3300032278|Ga0310345_12123130Not Available545Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean41.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine22.61%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine4.35%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater4.35%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface4.35%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.61%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic2.61%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids2.61%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment2.61%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.61%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface2.61%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.87%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater0.87%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.87%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300000973Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93Host-AssociatedOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006318Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0200mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008417Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12TEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020444Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300021087Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025293Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026115Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
BBAY92_1007735313300000947Macroalgal SurfaceMKIDAKFFGAILFLIAQTSGAIWWASSLSAEVERLAGIQ
BBAY92_1011327123300000947Macroalgal SurfaceMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGG
BBAY93_1015207813300000973Macroalgal SurfaceMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRMDQLSTELEKINDRND
KVRMV2_10023054123300002231Marine SedimentMLHLTSDGLNPKMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPAIEKAIEGLDVMGFRVDQLSKELERINDRNDAIEN
KVRMV2_10036672533300002231Marine SedimentMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGTAIPALEAAAKQCGIEI
KVRMV2_10066412213300002231Marine SedimentMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGTAIPAL
JGI25131J35506_101199513300002511MarineMNIDGKFFGAILFLVAQTSGAIWWASSLSAEVERVANVQA
Ga0068470_104994113300006308MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPAIEKAIEGLD
Ga0068475_114269513300006318MarineMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGTAIPALEAEAKQCG
Ga0068476_113743113300006324MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGSAI
Ga0068476_140406823300006324MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPAIEKAIEGLDVMGFRVDQLSKELERINDRNDAI
Ga0068502_152570023300006336MarineMNIDAKFFGAIIFVVVQTCGAIWWASGLSAEVERLAGIQGRAIPA
Ga0068502_156007613300006336MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEG
Ga0098035_112268733300006738MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLGGIQGSSIPAIEKAIEGLDVMG
Ga0098039_119848213300006753MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMG
Ga0098039_132130923300006753MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGSSIPAIEKAIEGLDVMG
Ga0098044_128813623300006754MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGIQGSSIPAIEKAIEGLDVMG
Ga0098051_117472823300006924MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGVQGSSI
Ga0098057_103059633300006926MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGVQGSSIPAIEKAIEGLDVMGFRMDQLSTELEKINDRNDS
Ga0098034_118760223300006927MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLGGIQGSSIPAIEKAIEGLDVMGFRVEQLSKELERINDRNDAIEN
Ga0066366_1056766923300007283MarineMNIDAKFFGAILFLIAQTSGAIWWASGLSAEVERLAGIQDKAIPALEEEAV
Ga0105668_101131113300007758Background SeawaterMNIDAKFFSAIMFLLVQTIGAIWWASSLTSEVERLAGI
Ga0110931_121281123300007963MarineMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGRAIP
Ga0114898_102526443300008216Deep OceanMNIDAKFFGAILFLVAQTSGAIWWASSLSAEVERLSG
Ga0114898_103592323300008216Deep OceanMNIDAKFFGAILFLIAQTGGAIWWASSLSSEVDRLAGIQGEAIPA*
Ga0114898_104261413300008216Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAI
Ga0114899_101887323300008217Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVDQISKSWKR*
Ga0114899_106930213300008217Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELE
Ga0114899_113179533300008217Deep OceanMNIDAKFFGAILFLIAQTGGAIWWASGLSSEVDRLAGIQG
Ga0114899_114544013300008217Deep OceanMNIDAKFFGVIIFLVSQTAAGIWWAASLSSEVDRIGGIQGTSI
Ga0114899_123197513300008217Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVM
Ga0114904_110575113300008218Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLAGIQG
Ga0114905_107298733300008219Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGSAIPAIEKAIEGLDVMGFRVDQLSKELERI
Ga0114905_116546033300008219Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELER
Ga0114905_127945233300008219Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIP
Ga0114910_102326453300008220Deep OceanVDEPMNIPTYLLGAIIFVVAQTSAGIWWASGWSSEVERLAGIQGTAIPALQ*
Ga0114910_111907433300008220Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELERINDRNDAIE
Ga0115363_1007785913300008417SedimentMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSI
Ga0114996_1088827433300009173MarineMNIDAKFFSAIIFLVVQTSGAIWWASDISAEVERLA
Ga0114996_1106391113300009173MarineMNIDAKFFSAIIFLLVQTIGAIWWASGLTSEVERLAGIQGRAIPALE
Ga0114993_1114858513300009409MarineMNIDAKFFSAIIFLVVQTSGAIWWASDISAEVERLAGIQGVAIPALQAEAKN
Ga0114993_1130577213300009409MarineMNIDAKFFSAIIFLLVQTVGAIWWASGLTSEVERLAGIQGRAIPA
Ga0114909_104452323300009414Deep OceanMNIPTYLLGAIIFVVAQTSAGIWWASGLSSEVERLAGIQGTAIPALQ*
Ga0114908_107499453300009418Deep OceanMNIDAKFFGAILFLVAQTSGAIWWASSLSSEVQRLSGIQGEAI
Ga0114908_110046513300009418Deep OceanMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLA
Ga0114908_121926213300009418Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPAIEKAIEGLDVMGFRV
Ga0114932_1078509413300009481Deep SubsurfaceLNIDAKFFGAILFLIAQTSGAIWWASSLDAEVERVAGI
Ga0114900_107469713300009602Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELERINDRN
Ga0114900_110387013300009602Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLD
Ga0114901_105544543300009604Deep OceanMNIDAKFFGILIFLVSQTAARIWWSASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRV
Ga0114901_105576543300009604Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSI
Ga0114901_113577313300009604Deep OceanMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERL
Ga0114906_106233223300009605Deep OceanMNIPTYLLGAIIFVVAQTSAGIWWASGLSSGVERLAGIQGTAVPALQ*
Ga0114906_108323153300009605Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIE
Ga0105236_105532433300009619Marine OceanicMNVDAKFFGAILFLIAQTGGAIWWASGLSSEVDRLAGIQ
Ga0114912_113117113300009620Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELERMNDRNDAI
Ga0114933_1029115513300009703Deep SubsurfaceMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAG
Ga0114999_1004385513300009786MarineMNIDAKFLGAILFLVAQTSGAIWWASSLSAEVQRLSGIQGT
Ga0098056_122573923300010150MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPAIEKAIEGLDVMGFRVDQLSKELE
Ga0098047_1034540613300010155MarineMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLAGIQGTSIPALEEAIEGLDVMGFR
Ga0098047_1038250013300010155MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKE
Ga0133547_10062284143300010883MarineMNIDAKFFSAIIFLVVQTSGAIWWASGLSAEVERL
Ga0114934_1034238113300011013Deep SubsurfaceMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGRA
Ga0114934_1046867123300011013Deep SubsurfaceMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPSIEKAIEG
Ga0114934_1055827723300011013Deep SubsurfaceMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERL
Ga0181432_118370223300017775SeawaterMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLVGIL
Ga0181432_120209033300017775SeawaterMKVDAKFFGAILFLVAQTSGAIWWASSLSSEVERLAGIQGTSIPALEEA
Ga0181432_128196123300017775SeawaterVKIDSKFFGVMLFIIAQTCGAIWWASGLSAEVERLAGIQGRAMSALEAEAK
Ga0211578_1038596323300020444MarineMNIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLSGIQGNAIPALEAEAQK
Ga0211691_1028267933300020447MarineMNIDAKFFGAIIFLIVQTCGAIWWASGLSAEVERLAGIQGRAIPALEAEAKQC
Ga0206683_1046435833300021087SeawaterMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGRAIPALEA
Ga0226832_1014400413300021791Hydrothermal Vent FluidsMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGT
Ga0226832_1028047013300021791Hydrothermal Vent FluidsMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGTAIP
Ga0226832_1053911013300021791Hydrothermal Vent FluidsMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPSIEKA
(restricted) Ga0255049_1010995433300024517SeawaterMKIDPKFFGFMLFIIAQTGSAIWWASDISSEVERLAGIQG
(restricted) Ga0255048_1022852723300024518SeawaterMNIDAKFFGAIIFLIVQTCGAIWWASGLSAEVERLADIQGRAIPALE
(restricted) Ga0255047_1000496263300024520SeawaterMKIDPKFFGFMLFIIAQTGSAIWWASDISSEVERLAGIQGRAIPA
(restricted) Ga0255047_1044320913300024520SeawaterMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVSRLAG
(restricted) Ga0255047_1056846413300024520SeawaterLKVDPKFFGFMLFIIAQTGSAIWWASDISSEVERLAGIQGRAIPA
Ga0207906_102942833300025052MarineMNIDAKFFSAIIFLVVQTSGAIWWASDISAEVERLAGIQGV
Ga0208012_106772523300025066MarineMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGVQGTSIPSIEKAI
Ga0208553_104149933300025109MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLGGIQGSAIPAIEKA
Ga0208553_108236013300025109MarineMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGSSIPAIEKAIEGLDVMGFRMDQLSTELEKINDR
Ga0208182_101079513300025251Deep OceanMNIDAKFFGLIVFLVSQTAAGIWWAASLSSEVERLGGIQGTSI
Ga0208182_105581213300025251Deep OceanMNIDAKFFGAILFLVAQTSGAIWWASSLSAEVERLSGI
Ga0208182_106086223300025251Deep OceanMNIPTYLLGAIIFVVAQTSAGIWWASGLSSEVERLAGIQGTAIPALQ
Ga0208182_106202333300025251Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQ
Ga0208182_106621233300025251Deep OceanMNIDAKFFGAILFLIAQTGGAIWWASSLSSEVDRLAGIQGEAIPA
Ga0208029_100888243300025264Deep OceanMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLGGIQGTSIPALEEAIEGLDVMGFRVEQLS
Ga0208029_107758223300025264Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLA
Ga0208029_110330523300025264Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERL
Ga0208179_103340613300025267Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELERINDRNDAID
Ga0208179_109732513300025267Deep OceanMNIDAKFFGAILFLIAQTGGAIWWASSLSSEVDRLAGIQGEAIPALEAE
Ga0208813_107619433300025270Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIE
Ga0208183_108040133300025274Deep OceanMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLGGIQGTSI
Ga0208180_104063013300025277Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRVEQLSKELERINDRNDAIENQHSR
Ga0208180_110395213300025277Deep OceanMNIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLGGV
Ga0208030_103053643300025282Deep OceanMNIDAKFFGAILFLIAQTGGAIWWASSLSSEVDRLAGIQGEAIPAL
Ga0208030_106449653300025282Deep OceanMNIDAKFFGAILFLVAQTSGAIWWASSLSSEVQRLSGIQGEA
Ga0208315_103422043300025286Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLAGIQGTSIPSIEKAIEGLDVMGFRAEQLSKELERIN
Ga0208315_111684713300025286Deep OceanMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGTSIPAIEKAIEGLDVMGFRVEQLSKELEKISDRNDAIENQHS
Ga0208934_101474713300025293Deep OceanMNIDAKFFGILIFLVSQTAAGIWWAASLSSEVERLGGIQGSSIPAIEKAIEGLDVMGFRMDQLSTELE
Ga0208934_109313313300025293Deep OceanMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVSRLAGIQGIS
Ga0208450_103437843300025301Deep OceanMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLAGIQGTSIPALE
Ga0208684_112731323300025305Deep OceanMNIDPKFFGIILFLVSQTAAGIWWAASLSSEVGRL
Ga0209757_1019116133300025873MarineMNIDGKFLGATLFVIAQTSGAIWWASSISSEVDRLAGIQGTAIP
Ga0208560_101572813300026115Marine OceanicMKIDAKFFGAILFLVAQTSGAIWWASSLSSEVERLSGIQGTSIPALEEAIEGLDVMG
Ga0208560_101761133300026115Marine OceanicMNIDAKFFGIIIFLVSQTAAGIWWAASLSSEVERLGGIQGSA
Ga0209089_1066912023300027838MarineMNIDAKFFSAIIFLLVQTVGAIWWASGLTSEVERLAGIQGRAIPALE
Ga0256382_116972633300028022SeawaterMNIDAKFFGAILFLIAQTCAAIWWASGLSSEVDRLAGI
Ga0302123_1031006823300031623MarineMNIDSKFFSAIIFLVVQTIGAIWWASGISSEVDRLAGIQGSAIPA
Ga0315318_1077103413300031886SeawaterLKVDSKFFGFLLFLIAQTGSAIWWASDISSEVERLAGIQGR
Ga0310344_1044824613300032006SeawaterMNIDAKFFGAIIFVIVQTCGAIWWASGLSAEVERLAGIQGTAIPALEAEAKQC
Ga0310345_1172461513300032278SeawaterMNIDAKFFGAIIFLIVQTCGAIWWASGLSAEVERLAGIQGRAIP
Ga0310345_1212313013300032278SeawaterMNIDAKFFGVIIFLVSQTAAGIWWAASLSSEVDRIGG


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