Metagenome / Metatranscriptome Family F080058

Basic Information
Family ID	F080058
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	50 residues
Representative Sequence	MNEYKVELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEGEE
Number of Associated Samples	81
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.26 %
% of genes near scaffold ends (potentially truncated)	28.70 %
% of genes from short scaffolds (< 2000 bps)	73.91 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (60.870 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (14.783 % of family members)
Environment Ontology (ENVO)	Unclassified (51.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.130 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 12200110855 2JGI12547J11936_10550823 3B570J29032_1095522953 4B570J40625_10000277325 5B570J40625_1001512406 6B570J40625_1005723582 7B570J40625_1011868352 8JGI25919J51413_10217351 9JGI25928J51866_10126222 10Ga0065166_101879892 11Ga0066182_100142811 12Ga0070374_104684262 13Ga0049081_102300631 14Ga0049080_100922461 15Ga0049080_102723091 16Ga0049085_101903612 17Ga0049082_100182284 18Ga0078894_1002676213 19Ga0078894_104227363 20Ga0078894_106136154 21Ga0078894_116296283 22Ga0079957_10252327 23Ga0070743_100268311 24Ga0070744_1000066626 25Ga0070744_1000201810 26Ga0070744_100157485 27Ga0070744_100752061 28Ga0070744_101047822 29Ga0070744_102300632 30Ga0075464_106925502 31Ga0102817_11626671 32Ga0102895_11943963 33Ga0102868_10425461 34Ga0102910_10784603 35Ga0102859_11187212 36Ga0114340_11136423 37Ga0114344_10393125 38Ga0102891_10341903 39Ga0102854_11323381 40Ga0114980_100051965 41Ga0114980_100270284 42Ga0114974_107969932 43Ga0114982_12096952 44Ga0126448_100166210 45Ga0157210_10029505 46Ga0157210_10089417 47Ga0163199_11287043 48Ga0177922_112305732 49Ga0119960_10428951 50Ga0181357_11069191 51Ga0211732_10771502 52Ga0211732_11259632 53Ga0211732_148108910 54Ga0211732_15698322 55Ga0211736_101572442 56Ga0211736_101573992 57Ga0211736_107872692 58Ga0211733_101471013 59Ga0211733_111161734 60Ga0208483_10162591 61Ga0208235_10128813 62Ga0208487_10078745 63Ga0207939_10314062 64Ga0208231_10530161 65Ga0210301_11151853 66Ga0222713_1000269219 67Ga0212124_100586108 68Ga0244775_1000761732 69Ga0244775_100215648 70Ga0244775_100775465 71Ga0244775_104262493 72Ga0244775_107971313 73Ga0244776_102525454 74Ga0208797_100331610 75Ga0208554_10364033 76Ga0208557_10251261 77Ga0208025_10199094 78Ga0208442_10093316 79Ga0208808_10270001 80Ga0208444_10179121 81Ga0208805_10212811 82Ga0255103_10527093 83Ga0209552_10581761 84Ga0208966_10615702 85Ga0208966_11278441 86Ga0208133_10127094 87Ga0209443_10652001 88Ga0209443_11018044 89Ga0209599_101582862 90Ga0209596_11587892 91Ga0209088_1001624310 92Ga0209088_103269712 93Ga0209107_100199216 94Ga0209107_100361912 95Ga0209107_100477621 96Ga0209229_101548083 97Ga0209354_102194393 98Ga0209230_101228085 99Ga0209550_100740846 100Ga0209550_103340042 101Ga0209550_105844451 102Ga0209298_1000374910 103Ga0247723_10130932 104Ga0247723_10416564 105Ga0247722_1002355610 106Ga0334992_0081458_1455_1613 107Ga0334992_0275339_123_293 108Ga0334996_0514990_224_406 109Ga0335005_0372094_606_764 110Ga0334995_0223703_1159_1287 111Ga0335019_0293116_221_379 112Ga0335028_0184735_942_1100 113Ga0335037_0716249_2_145 114Ga0335055_0093635_1031_1213 115Ga0335055_0103524_1054_1212
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 12200110855 2B570J40625_10000277325 3B570J40625_1005723582 4Ga0066182_100142811 5Ga0070744_100752061 6Ga0119960_10428951 7Ga0211733_101471013 8Ga0208554_10364033 9Ga0208966_11278441 10Ga0334996_0514990_224_406
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 12200110855 2B570J40625_10000277325 3B570J40625_1005723582 4Ga0066182_100142811 5Ga0070744_100752061 6Ga0119960_10428951 7Ga0211733_101471013 8Ga0208554_10364033 9Ga0208966_11278441 10Ga0334996_0514990_224_406
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.92% β-sheet: 40.38% Coil/Unstructured: 32.69%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF14025	DUF4241	7.83
PF06067	DUF932	5.22
PF13640	2OG-FeII_Oxy_3	1.74
PF12849	PBP_like_2	0.87
PF13578	Methyltransf_24	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	39.13 %
Unclassified	root	N/A	60.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.74 %
Unclassified	root	N/A	60.87 %
Viruses	superkingdom	All Organisms → Viruses	37.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.74 %
Unclassified	root	N/A	60.87 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.43 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.43 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	10.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %

Name	Rank	Taxonomy	Distribution
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10.43 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10.43 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10.43 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.96 %
Unclassified	root	N/A	60.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10.43 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352005\|2199920127	Not Available	515	Open in IMG/M
3300000736\|JGI12547J11936_1055082	Not Available	793	Open in IMG/M
3300002408\|B570J29032_109552295	Not Available	865	Open in IMG/M
3300002835\|B570J40625_100002773	Not Available	32802	Open in IMG/M
3300002835\|B570J40625_100151240	Not Available	2648	Open in IMG/M
3300002835\|B570J40625_100572358	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
3300002835\|B570J40625_101186835	Not Available	640	Open in IMG/M
3300003488\|JGI25919J51413_1021735	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	506	Open in IMG/M
3300003616\|JGI25928J51866_1012622	All Organisms → Viruses → Predicted Viral	2427	Open in IMG/M
3300004112\|Ga0065166_10187989	Not Available	808	Open in IMG/M

Showing 1 to 10 of 115 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.65%
Terrestrial	Environmental → Terrestrial	4.35%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.35%
Freshwater	Environmental → Aquatic → Freshwater	66.96%
Marine	Environmental → Aquatic → Marine	27.83%
Unclassified	Environmental → Aquatic → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.78%
Lake	Environmental → Aquatic → Freshwater → Lake	27.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.65%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.74%
River	Environmental → Aquatic → Freshwater → River	0.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.17%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	7.83%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	14.78%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	27.83%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	25.22%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.17%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.87%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.74%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	2.61%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	14.78%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	11.30%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.43%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.61%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.74%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.87%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.61%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.74%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.09%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	6.09%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.74%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.87%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.87%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M

Showing 1 to 10 of 81 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200110855	2199352005	Freshwater	MNEYTVELIHEPSGAHMNFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEEE
JGI12547J11936_10550823	3300000736	Freshwater And Sediment	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAREIWADMSVVVLDYVEGEE*
B570J29032_1095522953	3300002408	Freshwater	MNKYEVEVIHEPSGAHMSFIMFSETNEDEIELAKEIWADMSVIVLDYVEGEE*
B570J40625_10000277325	3300002835	Freshwater	MNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE*
B570J40625_1001512406	3300002835	Freshwater	MNEYTVELIHEPSGAHMNFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEEE*
B570J40625_1005723582	3300002835	Freshwater	MNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYKEGVEE*
B570J40625_1011868352	3300002835	Freshwater	MNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVVVLDYKEGDE*
JGI25919J51413_10217351	3300003488	Freshwater Lake	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVXXYKEGDE*
JGI25928J51866_10126222	3300003616	Freshwater Lake	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVXDYKEGDE*
Ga0065166_101879892	3300004112	Freshwater Lake	MNEYTVELIHEPSGAYMNFVMFSDLKQDEVALAKEIWADMSVVVLDYVEGEE*
Ga0066182_100142811	3300004125	Freshwater Lake	YKIELIHELSGAYMNFSLFTEEEQDEVALAKEIWSDMSVVVLDSIKEED*
Ga0070374_104684262	3300005517	Freshwater Lake	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVLDYKEGDE*
Ga0049081_102300631	3300005581	Freshwater Lentic	MNQYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSV
Ga0049080_100922461	3300005582	Freshwater Lentic	MNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIV
Ga0049080_102723091	3300005582	Freshwater Lentic	MNQYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIV
Ga0049085_101903612	3300005583	Freshwater Lentic	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE*
Ga0049082_100182284	3300005584	Freshwater Lentic	MGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEE*
Ga0078894_1002676213	3300005662	Freshwater Lake	MNEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYVEGEE*
Ga0078894_104227363	3300005662	Freshwater Lake	MNEYTVELIHEPSGAYMNFVVFSDVKQDEVALAKEIWSDMSVVVLDYVEGEE*
Ga0078894_106136154	3300005662	Freshwater Lake	MNEYTVELIHEPSGAHMNFVVFSDLKEDEIQLSKEIWADMSVVVLDYVEGEE*
Ga0078894_116296283	3300005662	Freshwater Lake	VNEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEEEE*
Ga0079957_10252327	3300005805	Lake	MNEYKVELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEGEE*
Ga0070743_100268311	3300005941	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED*
Ga0070744_1000066626	3300006484	Estuarine	MIEYKIELIHEPSGAYMNFALFTEEEQDEVTLAKEIWSDMSVVVLDSIKEED*
Ga0070744_1000201810	3300006484	Estuarine	MNEYTVELIHEPSGAYMNFIVFSDVKQDEVALAKEIWSDMSVVVLDYVEGEE*
Ga0070744_100157485	3300006484	Estuarine	MHEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYVEGEE*
Ga0070744_100752061	3300006484	Estuarine	PSGAHMNFVMFSDTKEDEIELAREIWADMSVVVLDYVEGEE*
Ga0070744_101047822	3300006484	Estuarine	MNSYEIELIHEPSGAYMNFILFSELKQDDIKVAEEIWADMSVIVLDYKEGDE*
Ga0070744_102300632	3300006484	Estuarine	MNQYEVELIHEPSGAHMSFIMFTETSNDEIALAEEIWADMSVVVLDYKEGDE*
Ga0075464_106925502	3300006805	Aqueous	HEPSGAHMSFVMFSDVKQDEVALAKEIWADMSVVVLDYIEGEE*
Ga0102817_11626671	3300007555	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEEE*
Ga0102895_11943963	3300007629	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEE
Ga0102868_10425461	3300007653	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIRAEMSVVVLDYNEEEE*
Ga0102910_10784603	3300007667	Estuarine	VELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED*
Ga0102859_11187212	3300007708	Estuarine	MNSYEIELIHEPSGAYMNFILFSELKQDDIDVAEAVWADMSVIVLDYKEGDE*
Ga0114340_11136423	3300008107	Freshwater, Plankton	MNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYEEGVEE*
Ga0114344_10393125	3300008111	Freshwater, Plankton	EPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYIEGEE*
Ga0102891_10341903	3300008950	Estuarine	MNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEEE*
Ga0102854_11323381	3300009058	Estuarine	MGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEK*
Ga0114980_100051965	3300009152	Freshwater Lake	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDYKEGEE*
Ga0114980_100270284	3300009152	Freshwater Lake	MNEYKIELIHEPSGAYMNFTLFSETKEDEVALAKEIWADMSVVVLDYIEGEE*
Ga0114974_107969932	3300009183	Freshwater Lake	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADMSVVVLDYKEGDE*
Ga0114982_12096952	3300009419	Deep Subsurface	MSQYTVELIHEPSGAYMNFVMFSEIENDEVQLAKEIWSDMSVVVLDYVEGEE*
Ga0126448_100166210	3300009466	Meromictic Pond	MNQYEVELIHEPSGAHMSFIMFSETKEDEIKLSEEIWADMSVVVLDYIEEEE*
Ga0157210_10029505	3300012665	Freshwater	VNEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDCIEEEE*
Ga0157210_10089417	3300012665	Freshwater	MNEYTVELIHEPSGAYMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYKEGEE*
Ga0163199_11287043	3300013092	Freshwater	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDHKEGDE*
Ga0177922_112305732	3300013372	Freshwater	MNSYEIELIHEPSGAYMNFVLFSELKQDDIDVAETIWADMSVIVLDYKEGDE*
Ga0119960_10428951	3300014811	Aquatic	HCCFPVTIGGAYMNFVMFSEIENDEVQLAKEIWSDMSVVVLDYVEGEE*
Ga0181357_11069191	3300017777	Freshwater Lake	KDNMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE
Ga0211732_10771502	3300020141	Freshwater	VRIGKEMNEYTVELIHEPSGAYMNFVMFSEVEQDEVALAKEIWADMSVVVLDYIEGEE
Ga0211732_11259632	3300020141	Freshwater	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADMSVIVLDYKEGDE
Ga0211732_148108910	3300020141	Freshwater	MNEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYIEGEE
Ga0211732_15698322	3300020141	Freshwater	MNQYEIELIHEPSGAHMSFIMFTETSSDEIALAEEIWADMSVVVLDYKEGDE
Ga0211736_101572442	3300020151	Freshwater	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADMSVVVLDYKEGDE
Ga0211736_101573992	3300020151	Freshwater	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELSKEIWADMSVIVLDYKEGDE
Ga0211736_107872692	3300020151	Freshwater	MNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYVEGVEE
Ga0211733_101471013	3300020160	Freshwater	MMMNQYEIELIHEPSGAHMSFIMFTETSSDEIALAEEIWADMSVVVLDYKEGDE
Ga0211733_111161734	3300020160	Freshwater	MNEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYVEGEE
Ga0208483_10162591	3300020492	Freshwater	EYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYVEGEE
Ga0208235_10128813	3300020530	Freshwater	NMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE
Ga0208487_10078745	3300020531	Freshwater	MNKYEVEVIHEPSGAHMSFIMFSETNEDEIELAKEIWADMSVIVLDYVEGEE
Ga0207939_10314062	3300020536	Freshwater	MNQYEIELIHEPSGAYMNFILFSELKQDDIDVAESIWADMSVIVLDYKEGDE
Ga0208231_10530161	3300020557	Freshwater	DMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE
Ga0210301_11151853	3300021325	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0222713_1000269219	3300021962	Estuarine Water	MNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVVVLDYKEGDE
Ga0212124_100586108	3300022553	Freshwater	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDYKEGDE
Ga0244775_1000761732	3300024346	Estuarine	MIEYKIELIHEPSGAYMNFALFTEEEQDEVTLAKEIWSDMSVVVLDSIKEED
Ga0244775_100215648	3300024346	Estuarine	MNEYTVELIHEPSGAYMNFIVFSDVKQDEVALAKEIWSDMSVVVLDYVEGEE
Ga0244775_100775465	3300024346	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAREIWADMSVVVLDYVEGEE
Ga0244775_104262493	3300024346	Estuarine	MHEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYVEGEE
Ga0244775_107971313	3300024346	Estuarine	MNEYTVELIHEPSGAYMNFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEQD
Ga0244776_102525454	3300024348	Estuarine	MGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEK
Ga0208797_100331610	3300027186	Estuarine	MIEYKIELIHEPSGAYMNFALFTEEEQDEVTLAKEIWSDMSVVVLDS
Ga0208554_10364033	3300027212	Estuarine	HEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEK
Ga0208557_10251261	3300027221	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEEE
Ga0208025_10199094	3300027225	Estuarine	GAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0208442_10093316	3300027229	Estuarine	MNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEED
Ga0208808_10270001	3300027238	Estuarine	YTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0208444_10179121	3300027240	Estuarine	ELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0208805_10212811	3300027241	Estuarine	HMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0255103_10527093	3300027493	Freshwater	PSGAHMNFVVFSDLKEDEVQLSKEIWADMSVVILDYVEGEE
Ga0209552_10581761	3300027563	Freshwater Lake	MIEYKIELIHELSGAYMNFSLFTEEEQDEVALAKEIWSDMSVVVLDSIKEED
Ga0208966_10615702	3300027586	Freshwater Lentic	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVLDYKEGDE
Ga0208966_11278441	3300027586	Freshwater Lentic	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETI
Ga0208133_10127094	3300027631	Estuarine	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE
Ga0209443_10652001	3300027707	Freshwater Lake	YTYYLKDNMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVLDYKEGDE
Ga0209443_11018044	3300027707	Freshwater Lake	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWAD
Ga0209599_101582862	3300027710	Deep Subsurface	MSQYTVELIHEPSGAYMNFVMFSEIENDEVQLAKEIWSDMSVVVLDYVEGEE
Ga0209596_11587892	3300027754	Freshwater Lake	MNEYTVELIHEPSGAHMSFVMFSDVKQDEIELAKEIWAEMSVVVLDYVEEEE
Ga0209088_1001624310	3300027763	Freshwater Lake	MNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDYKEGEE
Ga0209088_103269712	3300027763	Freshwater Lake	MNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYEEGVEE
Ga0209107_100199216	3300027797	Freshwater And Sediment	MNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYKEGVEE
Ga0209107_100361912	3300027797	Freshwater And Sediment	MNQYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE
Ga0209107_100477621	3300027797	Freshwater And Sediment	MNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWAD
Ga0209229_101548083	3300027805	Freshwater And Sediment	MNEYKVELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEGEE
Ga0209354_102194393	3300027808	Freshwater Lake	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVI
Ga0209230_101228085	3300027836	Freshwater And Sediment	MNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYK
Ga0209550_100740846	3300027892	Freshwater Lake	MIEYKIELIHELSGAYMNFSLFTEEEQDEVTLAKEIWSDMSVVVLDSIKEED
Ga0209550_103340042	3300027892	Freshwater Lake	MGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEE
Ga0209550_105844451	3300027892	Freshwater Lake	YYLKDNMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE
Ga0209298_1000374910	3300027973	Freshwater Lake	MNEYKIELIHEPSGAYMNFTLFSETKEDEVALAKEIWADMSVVVLDYIEGEE
Ga0247723_10130932	3300028025	Deep Subsurface Sediment	VNEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDCIEEEE
Ga0247723_10416564	3300028025	Deep Subsurface Sediment	MNKYEVEVIHEPSGAHMNFVMFSETNEDEIELSKEIWADMSVVILDYEEGVEE
Ga0247722_1002355610	3300028027	Deep Subsurface Sediment	VNEYKIELIHEPSGAYMNFVMFSETKEDEVALSKEIWADMSVVVLDCIEEN
Ga0334992_0081458_1455_1613	3300033992	Freshwater	MNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVVVLDYKEGDE
Ga0334992_0275339_123_293	3300033992	Freshwater	MRKKMNKYEVEVIHEPSGAHMSFIMFSETNEDEIELAKEIWADMSVIVLDYVEGEE
Ga0334996_0514990_224_406	3300033994	Freshwater	MKQSNKYEVELVHETSGAHMSFIMYTDISNDEIALADEIWADISVVVLDYEEGKEYGSPN
Ga0335005_0372094_606_764	3300034022	Freshwater	MNQYEVELVHEPSGAHMSFIMFTETSSDEIALAEEIWADMSVVVLDYKEGDE
Ga0334995_0223703_1159_1287	3300034062	Freshwater	MNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVI
Ga0335019_0293116_221_379	3300034066	Freshwater	MNEYTVELIHEPSGAHMNFVVFSDLKEDEIQLSKEIWADMSVVVLDYVEGEE
Ga0335028_0184735_942_1100	3300034071	Freshwater	MNSYEIELIHEPSGAYMNFILFSELKQDDIDVAESIWADMSVIVLDYKEGDE
Ga0335037_0716249_2_145	3300034107	Freshwater	MNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVVVLDYK
Ga0335055_0093635_1031_1213	3300034110	Freshwater	MKQSNKYEVELVHEPSGAHMSFITYTDISNDEIALADEIWADISVVVLDYEEGKEYGSPN
Ga0335055_0103524_1054_1212	3300034110	Freshwater	MNEYTVELIHEPSGAHINFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEEE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080058

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences