NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080020

Metagenome / Metatranscriptome Family F080020

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080020
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 110 residues
Representative Sequence MAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPESRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Number of Associated Samples 107
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.96 %
% of genes near scaffold ends (potentially truncated) 31.30 %
% of genes from short scaffolds (< 2000 bps) 92.17 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.913 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(31.304 % of family members)
Environment Ontology (ENVO) Unclassified
(32.174 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.217 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142
1KansclcFeb2_02026990
2JGI10213J12805_103524161
3JGI10216J12902_1046047102
4soilL2_101391172
5Ga0062593_1017456041
6Ga0062590_1007221382
7Ga0062595_1005253622
8Ga0066809_100676092
9Ga0070670_1012407472
10Ga0070678_1007588461
11Ga0081455_102351323
12Ga0074055_108374081
13Ga0074050_111336563
14Ga0075428_1022972131
15Ga0079217_100829292
16Ga0079215_105902772
17Ga0079218_106064952
18Ga0114129_1001783011
19Ga0105104_108461251
20Ga0105084_10432211
21Ga0105062_10506882
22Ga0105072_11409542
23Ga0126305_102445722
24Ga0126304_102775052
25Ga0126304_105462202
26Ga0126309_100075415
27Ga0126309_102845772
28Ga0134125_114643242
29Ga0134123_112754512
30Ga0137424_11161942
31Ga0137455_10319803
32Ga0136621_10583804
33Ga0136619_101944771
34Ga0137367_108676701
35Ga0157353_10296202
36Ga0136633_10165511
37Ga0136613_102818222
38Ga0157281_10574422
39Ga0157285_100547452
40Ga0157282_100472511
41Ga0157295_102691411
42Ga0157290_102091891
43Ga0157308_100340554
44Ga0157301_100557651
45Ga0157302_104418392
46Ga0137394_104856712
47Ga0162650_1000866191
48Ga0182001_103199952
49Ga0173480_107014741
50Ga0132256_1007095802
51Ga0132255_1001833782
52Ga0136617_101633911
53Ga0190266_100538623
54Ga0184634_100464723
55Ga0184625_102861202
56Ga0184628_100071298
57Ga0190265_117629552
58Ga0190272_118789052
59Ga0190269_103157452
60Ga0190268_106609542
61Ga0190268_117985462
62Ga0190270_100993163
63Ga0190270_116276131
64Ga0190270_131639721
65Ga0190274_115469211
66Ga0190271_137296412
67Ga0190273_102786252
68Ga0180112_10150562
69Ga0184647_11707601
70Ga0173481_100984242
71Ga0173479_105206562
72Ga0190264_113485891
73Ga0190267_104015191
74Ga0190267_106797922
75Ga0193739_10833801
76Ga0193697_11165941
77Ga0180113_12080622
78Ga0196964_101693402
79Ga0210380_100164482
80Ga0222622_102736722
81Ga0247786_11051161
82Ga0247745_10894652
83Ga0207669_110023701
84Ga0207640_102424672
85Ga0209896_10119183
86Ga0209879_10112373
87Ga0209818_10569422
88Ga0247828_102564491
89Ga0247822_117986571
90Ga0247821_104284612
91Ga0307295_101331812
92Ga0307299_101296543
93Ga0307287_100304383
94Ga0307294_100773342
95Ga0247825_103378563
96Ga0247825_109785852
97Ga0247825_112987402
98Ga0307286_103344052
99Ga0299907_103126772
100Ga0308183_10480622
101Ga0310887_103611071
102Ga0310886_102243142
103Ga0310900_108314772
104Ga0310884_104278491
105Ga0214473_100449383
106Ga0326597_117604301
107Ga0310902_113005942
108Ga0310906_110004461
109Ga0214472_100866974
110Ga0247829_104797042
111Ga0247830_112202261
112Ga0364927_0102175_175_510
113Ga0364935_0062419_809_1102
114Ga0364940_0182233_83_418
115Ga0373948_0213729_199_507
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.60%    β-sheet: 26.95%    Coil/Unstructured: 57.45%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110MAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPESRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
73.9%26.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Polar Desert Sand
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Serpentine Soil
Unplanted Soil
Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Soil
Groundwater Sand
Soil
Sediment
Soil
Arabidopsis Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
3.5%4.3%31.3%3.5%4.3%3.5%12.2%4.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_020269902124908045SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRYTADSFENASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDV
JGI10213J12805_1035241613300000858SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRQTCETFIDAVEYAFDFLDEHDPDREGRVSALEIVRVGPGSSQTVWRYEHDGSLDGHQDPVDLWGFDIVRWRGPQHPAAHPA*
JGI10216J12902_10460471023300000956SoilMAESHSHAAGQSSYEVHEGLKSHPGLDLGLRATFGDNMDAFEYAIEFLDEHDPHREGKVSALEIVKVGPGWRETVWRYEHDGSPAGHQDPKQIWGFDVTSWRGPNTAAFRG*
soilL2_1013911723300003319Sugarcane Root And Bulk SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRQTCETFIDAVEYAFDFLDEHDPDREGRVSALEIVRVGPGSSQTVWRYEHDGSLDGHQDPVDLWGFDIVKWRGPQHPAAHPA*
Ga0062593_10174560413300004114SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPDPESRETVWRYEYNGSQSGHQDPKEFWGFDVTAWRGPDRAAYPAQ
Ga0062590_10072213823300004157SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAAHPA*
Ga0062595_10052536223300004479SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSALEIVRVGPGSSQMVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAAHPA*
Ga0066809_1006760923300005168SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ*
Ga0070670_10124074723300005331Switchgrass RhizosphereMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPDPESRETVWRYEYNGSHSGHQDPKEFWGFDVTAWRGPDRAAYPAQ*
Ga0070678_10075884613300005456Miscanthus RhizosphereMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPDPESRETVWRYEYNGSHGGHQDPREFWGFDVT
Ga0081455_1023513233300005937Tabebuia Heterophylla RhizosphereMAESQSHAAGQSYAVRESLKRHPGLDLGLRQTCETFIDAVEFAFDFLDEHDPDREGRVSALEIVRVGPGSSQTVWRYEHDGSLDGHQDPVDLWGFDIVRWRGPQHPAAHPA*
Ga0074055_1083740813300006573SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSQSGHQDP
Ga0074050_1113365633300006577SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSQSGHQDPREF
Ga0075428_10229721313300006844Populus RhizosphereMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAA
Ga0079217_1008292923300006876Agricultural SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRYTCNSFTDATEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEHNSSPSGHQEPKERWGFEANAWRGPDRAAFPAR*
Ga0079215_1059027723300006894Agricultural SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRFTSDSFLEASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ*
Ga0079218_1060649523300007004Agricultural SoilMAESQSHAAMESRFLVRESMKRHPGLDLGVRHTCETFLDAAEFAIEFLDEHDPHREGRVGALEIVRESPEPSETVWRYEHDGSRSGHQDGRSIWGFDANAWKGPVRAAYPA*
Ga0114129_10017830113300009147Populus RhizosphereMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGPSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAAHPA*
Ga0105104_1084612513300009168Freshwater SedimentMAESQSHAAGQPYAVRESLKRHPGLDLGLRYTCETFIDAVEYAFDFLDEHDPQREGRVSALEIVRVARESSETVWRYEHDGSQSGHQDPKELWGFDIVK
Ga0105084_104322113300009811Groundwater SandMAERERDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVDGEQRETVWRYDHNGSQDGHQDPKEIWGFDANAWRGPDRAASRA*
Ga0105062_105068823300009817Groundwater SandMAERERDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVEGKQREAVWRYDHDGSPKGHQDP
Ga0105072_114095423300009818Groundwater SandMAERERDLCHAAGQPVYEVHEGLKHHPGLDLGLLFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVDGEQRETVWRYDHN
Ga0126305_1024457223300010036Serpentine SoilMAESQSHAAGQSYAVHESMKLHPGLDLGIRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPGARETVWRYEYNGSHSGHQDPREFWGFDVNSWRGPERAAYPAQ*
Ga0126304_1027750523300010037Serpentine SoilMAENPSHAAGQTYAVHESMKLHPGLDLGLRYTSDSFLEASDFAFEFLNEHDPNREGRVSALEILRIGPDSREIVWRYAYDGSPSGHQDPVEVWGFDVTTWRGPDRAAYPAP*
Ga0126304_1054622023300010037Serpentine SoilMAESQSHAAGQSYAVHESMKLHPGLDLGIRHTADSFENASEFAFEFLDEHDPKREGRVSALEIVRVGPEPGARETVWRYEYNGSHSGHQDPREFWGFDVNSWRGPERAAYPAQ*
Ga0126309_1000754153300010039Serpentine SoilMAEPNSHAAAQSSYEVHEGLKSHPGLDLGLRATCESSTDALDFAFDFLDEHDPEREGRVSALEIVKVHPGQRETVWRYEHDGSHRGHQDPTEVWGFDITRWRGPDRAAFRA*
Ga0126309_1028457723300010039Serpentine SoilMAERHDLCHAAGQPVYEVHEGLKHHPGLDLGLRFASPSFLDSADYALEFLDEHDPRREGRVSALEILRVEGERRETVWRYDHDGSPAGHQDPKEMWGFDANSWRGPDRAASRA*
Ga0134125_1146432423300010371Terrestrial SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPNSRETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ*
Ga0134123_1127545123300010403Terrestrial SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREFWGFDVNTWRGPDRAAYPAQ*
Ga0137424_111619423300011412SoilDAALKAAPYAQSRKENSMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFVFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAP*
Ga0137455_103198033300011429SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPDSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ*
Ga0136621_105838043300012092Polar Desert SandMAETQSHAAGQSYAVHESMKLHPGLDLGLRHTSDSFLEASEFALEFLDEHDPNREGRVSALEIVRIGPESCETVWRYEYNGSQSGHQDPRELWGFDVNAWRGPDRAAYPGR*
Ga0136619_1019447713300012185Polar Desert SandMAETQSHAAGQSYAVHESMKLHPGLDLGLRHTSDSFLEASEFALEFLDEHDPNREGRVSALEIVRIGPESCETVWRYEYNGSQSGHQDP
Ga0137367_1086767013300012353Vadose Zone SoilMGDAARSAASYAEPGKEQGMAESHSHAAGQSYQVHEGLKSHPGLDLGLRATFEDNMDAFEFAVEFLDEHDPQREGRVSALEIVKVGPGWREIVWRYEHDGSPRGHQDPKQIWGFDVTSWRGPDSAAFRA*
Ga0157353_102962023300012496Unplanted SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVKWRGPQHPAAHPA*
Ga0136633_101655113300012527Polar Desert SandSHAAGQSYAVHESMKLHPGLDLGLRHTSDSFLEASEFALEFLDEHDPNREGRVSALEIVRIGPESCETVWRYEYNGSQSGHQDPRELWGFDVNAWRGPDRAAYPGR*
Ga0136613_1028182223300012681Polar Desert SandMAETQSHAAGLSYAVHESMKLHPGLDLGLRHTSDSFLEASEFAFEFLDEHDPNREGRVSALEIVRIGPESRETVWRYEYNGSQSGHQDHRKVWGFDVNAWRGPDRAAYPTR*
Ga0157281_105744223300012883SoilNSVTRSGDAALKAAPYAQGRKENSMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPDPESRETVWRYEYNGSQSGHQDPKEFWGFDVTAWRGPDRAAYPAQ*
Ga0157285_1005474523300012897SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPKEFWGFDVTAWRGPDRAAYPAQ*
Ga0157282_1004725113300012904SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSQNGHQDPREFWGFDVNAWRGPDRAAYPAQ*
Ga0157295_1026914113300012906SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ
Ga0157290_1020918913300012909SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSHNGHQDPRELWGFDVNAWRGPERAAYPAP*
Ga0157308_1003405543300012910SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGP
Ga0157301_1005576513300012911SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ*
Ga0157302_1044183923300012915SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVQVGPEPEARETVWRYEYNGSHGGHQDPREFWGFDVTTWRGPDRAAYPAQ*
Ga0137394_1048567123300012922Vadose Zone SoilMAETHSHAAGKSSFEVHEGLKSHPGLDLGLRATFEDTMDAFEFALEFLDEHDPEREGRVSALEVVKVGPGSRETVWRYEHDGSRSGHQDSKQIWGFDASSWRGPDPAAFSK*
Ga0162650_10008661913300012939SoilMAESQSHAAGQPYAVRESLKRHPGLDLGLRATCETFIDAVEYAFDFLDEHDPQREGRVSALEIVRVARESSETVWRYEHDGSQDGHQDPKELWGFDIVKWRGPRHPAAHPA*
Ga0182001_1031999523300014488SoilMAERHSDLCHAAGQPVYEVHEGLKSHPGLDLGLRATFEDSMDAFEFAMEFLDEHDPEREGRVSALEIVKVGPGWRESVWRYEHDGSRTGHQDPKEIWGFDVKSWRGPDPAAFAS*
Ga0173480_1070147413300015200SoilTRSGDAALKAAPYAQGRKENSMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ*
Ga0132256_10070958023300015372Arabidopsis RhizosphereMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPEREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVKWRGPQHPAAHPA*
Ga0132255_10018337823300015374Arabidopsis RhizosphereMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPEREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAAHPA*
Ga0136617_1016339113300017789Polar Desert SandMAETQSHAAGLSYAVHESMKLHPGLDLGLRHTSDSFLEASEFAFEFLDEHDPNREGRVSALEIVRIGPESCETVWRYEYNGSQSGHQDPRTVWGFDVNAWRGPDRAAYPGR
Ga0190266_1005386233300017965SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ
Ga0184634_1004647233300018031Groundwater SedimentMDGTNPLRHAAGQPAYEVHESLKHHLGLDLGIRFTCDSFLDASDYALDFLDEHDPQREGKVSALEIVRVTSERRESVWRYEHNGSQGGHQDPKEIWGFDVTTWRGPQRVA
Ga0184625_1028612023300018081Groundwater SedimentMAESQSHAAGQPYAVRESLKRHPGLDLGLRYTCETFIDAVEYAFDFLDEHDPQREGRVSALEIVRVARESSETVWRYEHDGSQSGHQDPKELWGFDIVKWRGPRHPAAHPA
Ga0184628_1000712983300018083Groundwater SedimentMAETQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0190265_1176295523300018422SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTCNSFMDATEFAIEFLDEHDPNREGRVSALEIVRVGPEPESRETVWRYEYNGSPSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0190272_1187890523300018429SoilQSHAAGQSYAVHESMKLHPGLDLGLRHTSDTFEDASEFAFEFLDEHDPKREGRVSALEIVRIGPESRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0190269_1031574523300018465SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEHNGSPDGHQEPRERWGFDVNAWRGPDRAAYPAR
Ga0190268_1066095423300018466SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEYNGSHSGHQGPREIWGFDVNSWRGPDRAAYPTH
Ga0190268_1179854623300018466SoilMAERDSDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVDGEQRETVWRYDHDGSQKGHQDPKEIWGFDANS
Ga0190270_1009931633300018469SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRYTCNSFTDATEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEHNSSPSGHQEPKERWGFDANAWRGPDRAAFPAR
Ga0190270_1162761313300018469SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLNEHDPNREGRVSALEIVRVGPESRETVWRYEHNSSPSGHQEPKERWGFE
Ga0190270_1316397213300018469SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRYTADSFENASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ
Ga0190274_1154692113300018476SoilYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ
Ga0190271_1372964123300018481SoilQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPESRETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ
Ga0190273_1027862523300018920SoilMAESQSHAAGQSYAVHESMKLHPALDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSQSGHQDPREFWGFDVNSWRGPDRAAYPAQ
Ga0180112_101505623300019238Groundwater SedimentMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSPSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0184647_117076013300019263Groundwater SedimentQSHAAGQSYAVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0173481_1009842423300019356SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSHSGHQDPREFWGFDVTTWRGPDRAAYPAQ
Ga0173479_1052065623300019362SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPDPESRETVWRYEYNGSQSGHQDPKEFWGFDVNAWRGPDRAAYPAQ
Ga0190264_1134858913300019377SoilMAGTSHSHAAGQPAYEVHESLKHHLGLDLGLRHTCNSFLDASDYALDFLTEHDPKREGRVSALEIVRVTAERRETVWRYEYDGSARGHQDPKELW
Ga0190267_1040151913300019767SoilSMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPDPESRETVWRYEYNGSHSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0190267_1067979223300019767SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTCDSFMDATEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEYNGSQSGHQDPREYWGFDVNTWRGPDRAAYAAP
Ga0193739_108338013300020003SoilHAAGQSYAVHESMKLHPGLDLGLRYTSDSFMEASEFALEFLEEHDPNREGRVSALEIVRVGPESRETVWRYEYNGSPRGHQDPRELWGFDVTTWRGPDRAAYPAR
Ga0193697_111659413300020005SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPDSRQTVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0180113_120806223300020065Groundwater SedimentMAETQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVRPEPGSRETVWRYEYNGSPSGHQDPREVWGFDVNAWRGPDRAAYPAQ
Ga0196964_1016934023300020202SoilMVERTSDLCRAAGQPEYEVHEGLKHHPGLDLGLRFSSSSFLDSADFALEFLEEHDPLREGRVSALEIVRVDGEHRRTVWRYDHDGSRDGHQDPKELWGFDANSWRGPDRAATRA
Ga0210380_1001644823300021082Groundwater SedimentMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPGSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0222622_1027367223300022756Groundwater SedimentMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0247786_110511613300022883SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNSEGRVSALEIVRVGPDPESRETVWRYEYNGSHSGHQDPKEFW
Ga0247745_108946523300022898SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRFGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAAHPA
Ga0207669_1100237013300025937Miscanthus RhizosphereMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPNSRETVWRYEYNGSQSGHQDPREFWGFDVNAWRGPDRAAYPAQ
Ga0207640_1024246723300025981Corn RhizosphereMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGPQHPAAHPA
Ga0209896_101191833300027006Groundwater SandMAERERDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVDGEQRETVWRYDHNGSQDGHQDPKEIWGFDANAWRG
Ga0209879_101123733300027056Groundwater SandMAERERDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVDGEQRETVWRYDHNGSQDGHQDPKEIWGFDANAWRGPDRAASRA
Ga0209818_105694223300027637Agricultural SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRYTCNSFTDATEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEHNSSPSGHQEPKERWGFEANAWRGPDRAAFPAR
Ga0247828_1025644913300028587SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSHNGHQDPRELWGFDVNAWRGPERAAYPAP
Ga0247822_1179865713300028592SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPDSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPD
Ga0247821_1042846123300028596SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFVFEFLDEHDPKREGRVSALEIVRVGPDSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0307295_1013318123300028708SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0307299_1012965433300028793SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPESRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0307287_1003043833300028796SoilMAETQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0307294_1007733423300028810SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPERAAYPAQ
Ga0247825_1033785633300028812SoilMAERDSDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVEGEQRETVWRYDYDGSQKGLQDPKEIWGFDVNAWRGPDRAASRA
Ga0247825_1097858523300028812SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPDSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0247825_1129874023300028812SoilVHESMKLHPGLDLGLRHTAGSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0307286_1033440523300028876SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPEPEARETVWRYEYNGSPSGHQDPREFWGFDVNTWRGPDRAAYPAQ
Ga0299907_1031267723300030006SoilMAESQSHAAMEPRYAVRESMKRHPGLDLGLRQRCTTFLDAAEFAIEFLDEHDPHREGRVSALEIVRELPEPSEVVWRYEHDGSRTGHQDPREVWGFDANAWRGPDRAAYPA
Ga0308183_104806223300030988SoilMAENQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPESRETVWRYEYNGSHSGHQDPREFWGFDVNSWRGPERAAYPAQ
Ga0310887_1036110713300031547SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPENSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0310886_1022431423300031562SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSQSGHQDPREFWGFDVNSWRGPDRAAYPAQ
Ga0310900_1083147723300031908SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSQSGHQDPREFWGFD
Ga0310884_1042784913300031944SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPKREGRVSALEIVRVGPEPEARETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0214473_1004493833300031949SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTSDTFLDASDFALEFLDEHDPNREGRVSALEIVRIGPESRETVWRYEYNGSQSGHQDPKEVWGFDVNAWRGPDRAAYRAR
Ga0326597_1176043013300031965SoilMAEMQSHAAGQSYAVHESMKLHPGLDLGLRHTSDSFMEASEFALEFLEEHDPNREGRVSALEIVRIGPESRETVWRYEYNGSPRGHQDPREVWGFDVNTWRGPDRAAYPAR
Ga0310902_1130059423300032012SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSSDGHQDPVDLWGFDIVRWRGPQHPAAHPA
Ga0310906_1100044613300032013SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDL
Ga0214472_1008669743300033407SoilMDGTNPLRHAAGQPAYEVHESLKHHFGLDLGIRFTCDSFLDASDYALDFLDEHDPQREGKVSALEVVRVTAERRETVWRYEHDGSQGGHQDPKEIWGFDVMTWRGPDRAAFRD
Ga0247829_1047970423300033550SoilMAERDSDLCHAAGQPVYEVHEGLKHHPGLDLGLRFSSSSFLDSAEYALEFLDEHDPKREGRVSALEILRVEGKQRETVWRYDYDGSQKGLQDPKEIWGFDVNAWRGPDRAASRA
Ga0247830_1122022613300033551SoilMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTSDSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPDSRETVWRYEYNGSQSGHQDPREFWGFDVNTWRGPDRAAYPAP
Ga0364927_0102175_175_5103300034148SedimentMAETQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFDFLDEHDPNREGRVSALEIVRVGPESRETVWRYEYNGSHSGHQGPREIWGFDVNSWRGPDRAAYPTR
Ga0364935_0062419_809_11023300034151SedimentMAESQSHAAGQSYAVHESMKLHPGLDLGLRHTADSFEDASEFAFEFLDEHDPNREGRVSALEIVRVGPESRETVWRYEYNGSHSGHQGPREIWGFDVN
Ga0364940_0182233_83_4183300034164SedimentMAESHSHAAGQSYEVHESMKLHPGLDLGLRHTSDSFLDASDFAFEFLDEHDPNRDGRVSALEIVRIGPESRETVWRYEYDGSQSGHQDPIEVWGFDVTTWRGPDRAAYPAR
Ga0373948_0213729_199_5073300034817Rhizosphere SoilMAESQSHAAGQSYAVRESLKRHPGLDLGLRHTCETFIDAVEYAFDFLDEHDPDREGRVSAIEIVRVGPGSSQTVWRYEHDGSPDGHQDPVDLWGFDIVRWRGP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.