Metagenome Family F079940

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079940
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	40 residues
Representative Sequence	MTNFTEIAIISLAFGVSLGYLIGIIKHLADNGWRLDSMDIV
Number of Associated Samples	65
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.04 %
% of genes near scaffold ends (potentially truncated)	8.70 %
% of genes from short scaffolds (< 2000 bps)	85.22 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (50.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (71.304 % of family members)
Environment Ontology (ENVO)	Unclassified (98.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.783 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1JGI25133J35611_100077212 2JGI25134J35505_100221604 3JGI25130J35507_10087122 4PicViral_10063527 5Ga0066837_102330652 6Ga0098033_100195616 7Ga0098033_10112228 8Ga0098033_10174862 9Ga0098033_10563422 10Ga0098033_11377622 11Ga0098033_11782301 12Ga0098033_11860841 13Ga0098035_100022638 14Ga0098035_10795592 15Ga0098035_10801672 16Ga0098035_10881142 17Ga0098058_10964182 18Ga0098058_11765271 19Ga0098040_10613242 20Ga0098040_11198902 21Ga0098039_11184673 22Ga0098039_11832341 23Ga0098039_12097161 24Ga0098044_11540921 25Ga0098054_11183172 26Ga0098054_12331752 27Ga0098054_13467812 28Ga0098053_10237221 29Ga0098057_10698911 30Ga0098034_10464982 31Ga0098034_12245192 32Ga0098052_10422071 33Ga0098052_11660231 34Ga0098052_12288631 35Ga0114898_10315372 36Ga0114898_10371533 37Ga0114905_10882202 38Ga0114905_12018162 39Ga0114910_10942512 40Ga0114996_102722914 41Ga0114993_102190072 42Ga0114902_11759561 43Ga0114908_11405572 44Ga0114994_103311712 45Ga0114997_105883272 46Ga0114911_10794582 47Ga0115000_107666552 48Ga0115002_106671051 49Ga0114999_105439972 50Ga0098056_10838092 51Ga0098059_13686841 52Ga0098047_101988882 53Ga0133547_1026863310 54Ga0181374_10364912 55Ga0181367_10003751 56Ga0181367_10063843 57Ga0181367_10835901 58Ga0181371_10513432 59Ga0181371_10526972 60Ga0181372_10443652 61Ga0181372_10681381 62Ga0181370_10136512 63Ga0181370_10268612 64Ga0181375_10288601 65Ga0181375_10794121 66Ga0181420_12117872 67Ga0181420_12147612 68Ga0181432_10073172 69Ga0181432_10194702 70Ga0181432_10212632 71Ga0181432_10282572 72Ga0181432_10306601 73Ga0181432_10563811 74Ga0181432_10752623 75Ga0181432_11237631 76Ga0181432_11241371 77Ga0181432_11320711 78Ga0181432_11441352 79Ga0181432_11673242 80Ga0181432_12353302 81Ga0181432_12538951 82Ga0211640_102969572 83Ga0255048_106721521 84Ga0208920_100119813 85Ga0208920_10949271 86Ga0208668_10576321 87Ga0208156_10270811 88Ga0208156_10428761 89Ga0208156_11013341 90Ga0208013_11125471 91Ga0208553_10538612 92Ga0209349_10067628 93Ga0209349_10632822 94Ga0209349_10715562 95Ga0209349_10793202 96Ga0208433_10590972 97Ga0208433_10919022 98Ga0208790_10199883 99Ga0208790_11250162 100Ga0209434_10736121 101Ga0209434_11997412 102Ga0209644_11588872 103Ga0208299_10089136 104Ga0208299_11275891 105Ga0209756_10200827 106Ga0208182_10264193 107Ga0207894_10939421 108Ga0208450_10702992 109Ga0209757_102580481 110Ga0209089_103675091 111Ga0256382_11236962 112Ga0302119_103243191 113Ga0302120_100526742 114Ga0315318_107157861 115Ga0315334_116879161
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1JGI25133J35611_100077212 2JGI25130J35507_10087122 3PicViral_10063527 4Ga0066837_102330652 5Ga0098033_100195616 6Ga0098033_10563422 7Ga0098033_11377622 8Ga0098040_10613242 9Ga0098040_11198902 10Ga0098052_12288631 11Ga0114905_12018162 12Ga0114996_102722914 13Ga0114994_103311712 14Ga0181370_10268612 15Ga0181375_10288601 16Ga0181432_10073172 17Ga0181432_10563811 18Ga0209349_10715562 19Ga0256382_11236962
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40. 1Ga0181432_10194702 2JGI25133J35611_100077212 3PicViral_10063527 4Ga0098033_11782301 5Ga0098035_100022638 6Ga0098039_11184673 7Ga0098039_12097161 8Ga0098054_11183172 9Ga0098054_12331752 10Ga0098054_13467812 11Ga0098034_10464982 12Ga0098034_12245192 13Ga0114898_10315372 14Ga0114996_102722914 15Ga0114993_102190072 16Ga0114908_11405572 17Ga0114994_103311712 18Ga0115002_106671051 19Ga0098056_10838092 20Ga0133547_1026863310 21Ga0181374_10364912 22Ga0181367_10003751 23Ga0181367_10063843 24Ga0181371_10513432 25Ga0181372_10443652 26Ga0181372_10681381 27Ga0181370_10136512 28Ga0181375_10794121 29Ga0181420_12117872 30Ga0181432_10073172 31Ga0181432_10212632 32Ga0181432_10282572 33Ga0181432_10563811 34Ga0181432_10752623 35Ga0181432_11241371 36Ga0181432_11320711 37Ga0181432_11441352 38Ga0181432_12353302 39Ga0211640_102969572 40Ga0255048_106721521 41Ga0208920_10949271 42Ga0208156_10270811 43Ga0208156_10428761 44Ga0208156_11013341 45Ga0209349_10715562 46Ga0208790_11250162 47Ga0209434_10736121 48Ga0209644_11588872 49Ga0208182_10264193 50Ga0209089_103675091 51Ga0256382_11236962 52Ga0315334_116879161
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.03% β-sheet: 0.00% Coil/Unstructured: 57.97%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04542	Sigma70_r2	46.09
PF13203	DUF2201_N	1.74
PF01510	Amidase_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	46.09
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	46.09
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	46.09
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	46.09

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.91 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.43 %
Unclassified	root	N/A	46.09 %
Viruses	superkingdom	All Organisms → Viruses	3.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %
unclassified Nitrospinota	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota	45.22 %

Name	Rank	Taxonomy	Distribution
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.87 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Alteromonas/Salinimonas group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group	0.87 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Alteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas	0.87 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Alteromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas australica	0.87 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.48 %
Unclassified	root	N/A	46.09 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300024518\|Ga0255048_10672152	Not Available	500	Open in IMG/M
3300002514\|JGI25133J35611_10007721	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	4919	Open in IMG/M
3300002518\|JGI25134J35505_10022160	All Organisms → Viruses → Predicted Viral	1919	Open in IMG/M
3300002519\|JGI25130J35507_1008712	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	2611	Open in IMG/M
3300003690\|PicViral_1006352	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	4120	Open in IMG/M
3300005593\|Ga0066837_10233065	Not Available	653	Open in IMG/M
3300006736\|Ga0098033_1001956	Not Available	8130	Open in IMG/M
3300006736\|Ga0098033_1011222	All Organisms → cellular organisms → Bacteria	2885	Open in IMG/M
3300006736\|Ga0098033_1017486	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	2243	Open in IMG/M
3300006736\|Ga0098033_1056342	Not Available	1149	Open in IMG/M

Showing 1 to 10 of 115 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.87%
Inlet	Environmental → Aquatic → Marine → Inlet	0.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.74%
Oceanic	Environmental → Aquatic → Marine → Oceanic	80.87%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.87%
Strait	Environmental → Aquatic → Marine → Strait	13.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.87%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	80.87%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	13.91%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	71.30%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.87%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.87%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	13.91%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.74%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.87%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.87%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 65 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25133J35611_100077212	3300002514	Marine	MNFTELAIISLASGIALGYLIGIIQHLADHNWRLDSMDWL*
JGI25134J35505_100221604	3300002518	Marine	MNFTEIAIITLASGFAXGYLIGIIQHLADHNWRLDSMDWL*
JGI25130J35507_10087122	3300002519	Marine	MAAEITEIAIFSLTFGVSLGYLIGIIKHLAANGWRLDSMDLI*
PicViral_10063527	3300003690	Marine, Hydrothermal Vent Plume	MTTQITELAIISLAFGVSLGYLVGIIKHLADNGWRFDEWV*
Ga0066837_102330652	3300005593	Marine	MTFTELVIMSVAFGVSLGYLIGIIDYLADNGWRFDELA*
Ga0098033_100195616	3300006736	Marine	MTEITEIAIITLAFGVSLGYLIGIINHLANNGWRFDQDAN*
Ga0098033_10112228	3300006736	Marine	MTEITEIAIISLAFGITLGYLIGIINYLASNGQRFDELA*
Ga0098033_10174862	3300006736	Marine	MAAEITEIAIFSLTFGVSLGYLIGIIKHLADHGWRLDSMDLI*
Ga0098033_10563422	3300006736	Marine	MTQFAELAIISVAFGVTLGYLIGIIKHLADHGWRFDNVDIT*
Ga0098033_11377622	3300006736	Marine	MTNFTELAIISLASGFAVGYLIGIVKHLIDNGGRFDLEAL*
Ga0098033_11782301	3300006736	Marine	MTEITEIAIITLAFGVSLGYLIGIIKHLIDNGGRFDLEAL*
Ga0098033_11860841	3300006736	Marine	MNFTEIAIITLASGFALGYLIGIIQHLADHNWRLDSMDWL*
Ga0098035_100022638	3300006738	Marine	MTEITEIAIISIAFGITLGYLIGIINYLASNGWCFDELA*
Ga0098035_10795592	3300006738	Marine	MTNFTEIAIITLASGFALGYLIGIIQHLADHNWRFDSMDLL*
Ga0098035_10801672	3300006738	Marine	MTEIAIISLAFGVSLGYLIGIIKHLANNGWRLDSMDII*
Ga0098035_10881142	3300006738	Marine	MTFTELVIMSVAFGVSLGYLIGIIDYLADNGWRFDDLA*
Ga0098058_10964182	3300006750	Marine	MTFTELAIMSVAFGVSLGYLIGIIDYLADNGWRFDSLDII*
Ga0098058_11765271	3300006750	Marine	MTNFTEIAIITLASGFALGYLIGIIQHLADHNWRLDSMDWL*
Ga0098040_10613242	3300006751	Marine	MTELTEIAIISLASGIAIGYLIGIVKHFADHNWRLDCIDLF*
Ga0098040_11198902	3300006751	Marine	MTEIAIISLAFGVTLGYLIGIINHLARNDWRFDELA*
Ga0098039_11184673	3300006753	Marine	MTEITEIVIITLAFGVSLGYLTGITKYLANNGWRFDELA*
Ga0098039_11832341	3300006753	Marine	MTAQITELAIISLAFGAALGYLIGIVKHLIDNGGRFDLEAL*
Ga0098039_12097161	3300006753	Marine	TELAIISLAFGTALGYLIGIVKHLADHGWRFDSMDLL*
Ga0098044_11540921	3300006754	Marine	MTEITEIAIISIAFGITLGYLIGIINYLASNGWRFDELA*
Ga0098054_11183172	3300006789	Marine	MTEIAIISLAFGITLGYLIGIINHLARNDWRFDELA*
Ga0098054_12331752	3300006789	Marine	MTQYTELAIISVAFGVSLGYLIGILKHLGDHGWRFDSLDVI*
Ga0098054_13467812	3300006789	Marine	MNFTELAIISLAFGVSLGYLIGIIQHLADHNWRLDSMDLL*
Ga0098053_10237221	3300006923	Marine	MNFTELAIISLAFGVSLGYLIGIIQHLADHNWRLDSMDWL*
Ga0098057_10698911	3300006926	Marine	MNFTEIAIISLASGFALGYLIGIIQHLADHNWRLDSMDWL*
Ga0098034_10464982	3300006927	Marine	MTAQITELAIISLASGFAVGYLIGIIQHLADHNWRLDSMDWL*
Ga0098034_12245192	3300006927	Marine	MTEITELSIITLAFGVSLGYLIGIIKHLADNGWRFDSMDII*
Ga0098052_10422071	3300008050	Marine	MTFTELAIMSVAFGVSLGYLIGIIDYLAENGWRFDELV*
Ga0098052_11660231	3300008050	Marine	MTAQITELAIISLASGFAVGYLIGIVQHLADHNWCLDSMDWL*
Ga0098052_12288631	3300008050	Marine	MTPEFVEIAIISVAFGVTLGYLIGIVHHLANHNWRFDSMDLL*
Ga0114898_10315372	3300008216	Deep Ocean	MTFTELAIMSVAFGVSLGYLIRIIDYLADNGWRFDELV*
Ga0114898_10371533	3300008216	Deep Ocean	MNFTELAIISLAFGVSLGYLIGIVKHLIDNGGRFNLERM*
Ga0114905_10882202	3300008219	Deep Ocean	MTFTELVIMSVAFGFSLGYLIGIIDYLADNGWRFDELA*
Ga0114905_12018162	3300008219	Deep Ocean	MTNFTEIAIISLAFGVSLGYLIGIVKHLADNGWRLDSLDVI*
Ga0114910_10942512	3300008220	Deep Ocean	MTFTELAIMSVAFGVSLGYLIRIIDYLADNGWRFDELA*
Ga0114996_102722914	3300009173	Marine	MTAQITELAIISLAFGTALGYLIGIVQHLADNGWRFDSVDFI*
Ga0114993_102190072	3300009409	Marine	MTTQITELAIISLAFGTALGYLIGIIQHLADYGWRFDSMDIL*
Ga0114902_11759561	3300009413	Deep Ocean	MTNFTEIAIISLAFGVSLGYLIGIVKHLADNGWRLDSLD
Ga0114908_11405572	3300009418	Deep Ocean	MTEITELSIISLAFGVSLGYLIGIIKHLASHGWRLDSMDLL*
Ga0114994_103311712	3300009420	Marine	MTTQITELAIISLAFGTVLGYLIGIVKHIIGNGGRFDVEAL*
Ga0114997_105883272	3300009425	Marine	MTTQITELAIISLAFGTALGYLIGIVKHIIGNGGRFDVEAL*
Ga0114911_10794582	3300009603	Deep Ocean	MTFTELVIMSVAFGFSLGYLIGIIDYLADNGWRFDELV*
Ga0115000_107666552	3300009705	Marine	MTAQITELAIISLAFGTVLGYLIGIVKHIIGNGGRFDVEAL*
Ga0115002_106671051	3300009706	Marine	MTTQITELAIISLAFGTALGYLIGIVKHLADNGWRFDEWA*
Ga0114999_105439972	3300009786	Marine	MTAQITELAIISLAFGTALGYLIGIIQHLADNGWRFDSMDIL*
Ga0098056_10838092	3300010150	Marine	MTEIAIISLAFGITLGYLIGIINYLASNGQRFDELA*
Ga0098059_13686841	3300010153	Marine	EIAIISLAFGITLGYLIGIIQHLADHNWRLDSMDWL*
Ga0098047_101988882	3300010155	Marine	MTEITEIAIISLAFGITLGYLIGIINYLASNGWCFDELA*
Ga0133547_1026863310	3300010883	Marine	MIQFTEIAIISLAFGVSLGYLIGIIKHLADHGWRLDNMDIL*
Ga0181374_10364912	3300017702	Marine	MTAQITELAIISLAFGAALGYLIGIVKHLIDNGGRFDLEAL
Ga0181367_10003751	3300017703	Marine	MTAQITELAIISLAFGAALGYLIGIINYLTSNGWRFDELA
Ga0181367_10063843	3300017703	Marine	MAAEITEIAIFSLTFGVSLGYLIGIIKHLAANGWRLDSMDLI
Ga0181367_10835901	3300017703	Marine	MNFTEIAIISLASGFALGYLIGIIQHLADHNWRLDSMDWL
Ga0181371_10513432	3300017704	Marine	MTQFAELAIISVAFGVTLGYLIGIIKHLADHGWRFDNVDIT
Ga0181371_10526972	3300017704	Marine	MTNFTEIAIITLASGFALGYLIGIIQHLADHNWRLDS
Ga0181372_10443652	3300017705	Marine	MTNFTEIAIITLASGFALGYLIGIIQHLADHNWRLDSMDWL
Ga0181372_10681381	3300017705	Marine	MTPEFVEIAIISVAFGVTLGYLIGIVHHLANHNWRFDSMDLL
Ga0181370_10136512	3300017715	Marine	MTNFTELAIISLASGFAVGYLIGIIQHLADHNWRFDSMDLL
Ga0181370_10268612	3300017715	Marine	MTEITELSIITLAFGVSLGYLVGIIKHLAGHGWRFDSLDII
Ga0181375_10288601	3300017718	Marine	ELSIITLAFGVSLGYLIGIIKHLADHGWRLDMDWI
Ga0181375_10794121	3300017718	Marine	MTNFTELAIMSVAFGVSLGYLIGIIDYLADNGWRFDDVA
Ga0181420_12117872	3300017757	Seawater	MTDLTEIAIISLASGVAIGYLIGIIQHLADHNWRLDCIDLF
Ga0181420_12147612	3300017757	Seawater	MTAQITELAIISLAFGVSLGYLIGIVKHLADHGWRF
Ga0181432_10073172	3300017775	Seawater	MTELAIISVAFGVSLGYLIGIIKHLVDHNWRFDSLDII
Ga0181432_10194702	3300017775	Seawater	MTNFTEIAIISLAFGVSLGYLIGIIKHLADNGWRLDSMDIV
Ga0181432_10212632	3300017775	Seawater	MTEIAIISLAFGVSLGYLIGIINYLAGNGWRFDELV
Ga0181432_10282572	3300017775	Seawater	MNFTEIAIITLAFGVSLGYLIGIIHYLAGNGWRFDELA
Ga0181432_10306601	3300017775	Seawater	MTFTELAIMSVAFGVSLGYLIGIIDYLADNGWRFDDLA
Ga0181432_10563811	3300017775	Seawater	MTYTELAIMSVAFGFSVGYLIKIIDYLADNGWNFDGGAS
Ga0181432_10752623	3300017775	Seawater	MASITELAIISLAFGVSLGYLIGITKYLADHGWRLDSMDLI
Ga0181432_11237631	3300017775	Seawater	ITELAIISLAFGVSLGYLIGITKYLADNGWRLDSMDLI
Ga0181432_11241371	3300017775	Seawater	MNFTELAIISIAFGVSLGYLIGIINYLADNGWRFDRGAN
Ga0181432_11320711	3300017775	Seawater	MAAQITELSIFSLAFGVSVGYLIGIIKHLANNDWRFDSMDLL
Ga0181432_11441352	3300017775	Seawater	MTEIAIISLASGVSLGYLIGIIKHLANNGWRLDSMDII
Ga0181432_11673242	3300017775	Seawater	MTEITELAIISLAFGVSLGYLIGIIQHLAAHNWRLDSMDLL
Ga0181432_12353302	3300017775	Seawater	VTEIVIISLAFGVSLGYLIGIIKHLADNGWRFDSMDII
Ga0181432_12538951	3300017775	Seawater	MTNFTELAIISLAFGVSLGYLIGIIKHLAANGWRLDSMDLI
Ga0211640_102969572	3300020465	Marine	MTPEFTEIAIITVAFGFTLGYLIGIIRQLADCGWRFDNMDLL
(restricted) Ga0255048_106721521	3300024518	Seawater	MTDFTEIAIISLAFGVSLGYLIGIIGYLVDNGWRFDELA
Ga0208920_100119813	3300025072	Marine	MTEITEIAIISIAFGITLGYLIGIINYLASNGWRFDELA
Ga0208920_10949271	3300025072	Marine	MTFTELVIMSVAFGVSLGYLIGIIDYLADNGWRFDSLDII
Ga0208668_10576321	3300025078	Marine	MNFTEIAIITLASGFALGYLIGIIQHLADHNWRLDSMDWL
Ga0208156_10270811	3300025082	Marine	MTNFTELAIISLASGFAVGYLIGIVKHLIDNGGRFDLEAL
Ga0208156_10428761	3300025082	Marine	MTEITEIAIITLAFGVSLGYLIGIINHLANNGWRFYQDAN
Ga0208156_11013341	3300025082	Marine	MAAEITEIAIFSLTFGVSLGYLIGIIKHLIDNGGRFDLEAL
Ga0208013_11125471	3300025103	Marine	MNFTELAIISLAFGVSLGYLIGIIQHLADHNWRLDSMDWL
Ga0208553_10538612	3300025109	Marine	MAAEITEIAIFSLTFGVSLGYLIGIIKHLADHGWRLDSMDLI
Ga0209349_10067628	3300025112	Marine	MTFTELVIMSVAFGVSLGYLIGIIDYLADNGWRFDELA
Ga0209349_10632822	3300025112	Marine	EIAIITLASGFALGYLIGIIQHLADHNWRLDSMDWL
Ga0209349_10715562	3300025112	Marine	LTPEIVEIAIISLAFGTVLGYLIGIVKHIIDNGGRLNMDWI
Ga0209349_10793202	3300025112	Marine	MTEITEIAIITLAFGVSLGYLIGIINHLANNGWRFDQDAN
Ga0208433_10590972	3300025114	Marine	MTFTELVIMSVAFGVSLGYLIGIIDYLADNGWRFDDLA
Ga0208433_10919022	3300025114	Marine	MTEIAIISLAFGVSLGYLIGIIKHLANNGWRLDSMDII
Ga0208790_10199883	3300025118	Marine	MTEITEIAIISLAFGITLGYLIGIINYLASNGWCFDELA
Ga0208790_11250162	3300025118	Marine	MTELTEIAIISLASGIAIGYLIGIVKHFADHNWRLDCIDLF
Ga0209434_10736121	3300025122	Marine	MNFTEIAIISVAFGVSLGYLIGIIDYLAENGWRFDELV
Ga0209434_11997412	3300025122	Marine	MTFTELAIISLASGFALGYLIGIIQHLADHNWRLDSMDLL
Ga0209644_11588872	3300025125	Marine	MTAEITELAIISLAFGVSLGYLIGIVKHLADNGWRFDSLDII
Ga0208299_10089136	3300025133	Marine	MTEIAIISLAFGVTLGYLIGIINHLARNDWRFDELA
Ga0208299_11275891	3300025133	Marine	MTQYTELAIISVAFGVSLGYLIGILKHLGDHGWRFDSLDVI
Ga0209756_10200827	3300025141	Marine	MNFTELAIISLASGIALGYLIGIIQHLADHNWRLDSMDWL
Ga0208182_10264193	3300025251	Deep Ocean	MNFTELAIISLAFGVSLGYLIGIVKHLIDNGGRFNLERM
Ga0207894_10939421	3300025268	Deep Ocean	MAAEITEIAIFSLTFGVSLGYLIGIIKHLAANGWRLDSMDL
Ga0208450_10702992	3300025301	Deep Ocean	MTFTELAIMSVAFGVSLGYLIRIIDYLADNGWRFDELA
Ga0209757_102580481	3300025873	Marine	DPMNFTEIAIITLAFGVSLGYLIGIIHYLADNGWRFDEWA
Ga0209089_103675091	3300027838	Marine	MTTQITELAIISLAFGTALGYLIGIISYLADNGWRFDELA
Ga0256382_11236962	3300028022	Seawater	MTDFAEIAIISLASGVAIGYSIGIIKHLADHGWRLDSMEWL
Ga0302119_103243191	3300031606	Marine	MTTQITELAIISLAFGTALGYLIGIVKHLADNGWRFDSMDIL
Ga0302120_100526742	3300031701	Marine	MTVQITELAIISLAFGTVLGYLIGIVKHIIGNGGRFDVETL
Ga0315318_107157861	3300031886	Seawater	MNFTELAIISLASGFALGYLIGIIQHLADHNWRLDSMDWL
Ga0315334_116879161	3300032360	Seawater	MIDFTEIAIISIAFGVSLGYLIGITKYLADHGWRLDSMDLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters