NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F079925

Metagenome Family F079925

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079925
Family Type Metagenome
Number of Sequences 115
Average Sequence Length 41 residues
Representative Sequence MAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTG
Number of Associated Samples 86
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Viruses
% of genes with valid RBS motifs 72.17 %
% of genes near scaffold ends (potentially truncated) 98.26 %
% of genes from short scaffolds (< 2000 bps) 89.57 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (35.652 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(43.478 % of family members)
Environment Ontology (ENVO) Unclassified
(58.261 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.087 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 27.50%    Coil/Unstructured: 72.50%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF13884Peptidase_S74 67.83
PF11962Peptidase_G2 2.61
PF16778Phage_tail_APC 0.87
PF00386C1q 0.87



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.09 %
UnclassifiedrootN/A33.04 %
unclassified Hyphomonasno rankunclassified Hyphomonas0.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10215200All Organisms → Viruses → environmental samples → uncultured Mediterranean phage606Open in IMG/M
3300005512|Ga0074648_1062779All Organisms → Viruses → Predicted Viral1512Open in IMG/M
3300005821|Ga0078746_1087200Not Available709Open in IMG/M
3300006025|Ga0075474_10052168Not Available1382Open in IMG/M
3300006026|Ga0075478_10005258All Organisms → Viruses → Predicted Viral4514Open in IMG/M
3300006026|Ga0075478_10106707All Organisms → Viruses891Open in IMG/M
3300006029|Ga0075466_1026044All Organisms → Viruses → Predicted Viral1856Open in IMG/M
3300006029|Ga0075466_1114651All Organisms → Viruses → environmental samples → uncultured Mediterranean phage719Open in IMG/M
3300006752|Ga0098048_1228682Not Available546Open in IMG/M
3300006793|Ga0098055_1109544All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300006802|Ga0070749_10272857All Organisms → cellular organisms → Bacteria → Proteobacteria953Open in IMG/M
3300006802|Ga0070749_10386391All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes774Open in IMG/M
3300006810|Ga0070754_10096058All Organisms → Viruses → Predicted Viral1470Open in IMG/M
3300006867|Ga0075476_10024974All Organisms → Viruses → Predicted Viral2547Open in IMG/M
3300006867|Ga0075476_10096657Not Available1139Open in IMG/M
3300006868|Ga0075481_10031445All Organisms → Viruses → Predicted Viral2068Open in IMG/M
3300006869|Ga0075477_10170693Not Available901Open in IMG/M
3300006916|Ga0070750_10065007All Organisms → Viruses → Predicted Viral1738Open in IMG/M
3300006919|Ga0070746_10193607Not Available971Open in IMG/M
3300006920|Ga0070748_1100985All Organisms → Viruses → Predicted Viral1099Open in IMG/M
3300007344|Ga0070745_1083806All Organisms → cellular organisms → Bacteria → Proteobacteria1263Open in IMG/M
3300007345|Ga0070752_1133138All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300007538|Ga0099851_1054517All Organisms → Viruses → Predicted Viral1567Open in IMG/M
3300007538|Ga0099851_1173714Not Available794Open in IMG/M
3300007539|Ga0099849_1293034All Organisms → Viruses589Open in IMG/M
3300007540|Ga0099847_1033686All Organisms → Viruses → Predicted Viral1640Open in IMG/M
3300007540|Ga0099847_1070024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1086Open in IMG/M
3300007540|Ga0099847_1092597Not Available924Open in IMG/M
3300007542|Ga0099846_1214789All Organisms → Viruses675Open in IMG/M
3300007640|Ga0070751_1380796Not Available511Open in IMG/M
3300007778|Ga0102954_1207173All Organisms → Viruses577Open in IMG/M
3300007960|Ga0099850_1226963Not Available726Open in IMG/M
3300008012|Ga0075480_10516142Not Available574Open in IMG/M
3300009000|Ga0102960_1074122All Organisms → Viruses → Predicted Viral1246Open in IMG/M
3300009001|Ga0102963_1009260All Organisms → Viruses → Predicted Viral4222Open in IMG/M
3300009001|Ga0102963_1040941All Organisms → Viruses → Predicted Viral1925Open in IMG/M
3300009001|Ga0102963_1069035All Organisms → Viruses → Predicted Viral1452Open in IMG/M
3300009027|Ga0102957_1264865Not Available624Open in IMG/M
3300009124|Ga0118687_10092830Not Available1039Open in IMG/M
3300009418|Ga0114908_1240903Not Available551Open in IMG/M
3300009435|Ga0115546_1352848All Organisms → Viruses500Open in IMG/M
3300010149|Ga0098049_1237806Not Available554Open in IMG/M
3300010150|Ga0098056_1098704All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300010299|Ga0129342_1126684Not Available944Open in IMG/M
3300010318|Ga0136656_1177583Not Available720Open in IMG/M
3300010368|Ga0129324_10411002All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300017710|Ga0181403_1067610All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300017824|Ga0181552_10085378All Organisms → Viruses → Predicted Viral1777Open in IMG/M
3300017985|Ga0181576_10099193All Organisms → Viruses → Predicted Viral1959Open in IMG/M
3300018036|Ga0181600_10385109Not Available684Open in IMG/M
3300018041|Ga0181601_10708823Not Available506Open in IMG/M
3300018048|Ga0181606_10121632All Organisms → Viruses → Predicted Viral1609Open in IMG/M
3300018416|Ga0181553_10150646All Organisms → Viruses → Predicted Viral1384Open in IMG/M
3300018416|Ga0181553_10243334All Organisms → Viruses → Predicted Viral1021Open in IMG/M
3300018416|Ga0181553_10323280Not Available853Open in IMG/M
3300018420|Ga0181563_10071747All Organisms → Viruses → Predicted Viral2348Open in IMG/M
3300018420|Ga0181563_10309481Not Available921Open in IMG/M
3300018876|Ga0181564_10776262Not Available502Open in IMG/M
3300019765|Ga0194024_1077965Not Available748Open in IMG/M
3300019765|Ga0194024_1164408All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes524Open in IMG/M
3300020053|Ga0181595_10171249Not Available979Open in IMG/M
3300020173|Ga0181602_10349989All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes595Open in IMG/M
3300020191|Ga0181604_10157508All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300020194|Ga0181597_10093164All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1691Open in IMG/M
3300021368|Ga0213860_10402316All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300021373|Ga0213865_10426732Not Available582Open in IMG/M
3300021373|Ga0213865_10453101All Organisms → Viruses → environmental samples → uncultured Mediterranean phage557Open in IMG/M
3300021379|Ga0213864_10192581All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300021957|Ga0222717_10043177All Organisms → Viruses → Predicted Viral2941Open in IMG/M
3300021957|Ga0222717_10401468unclassified Hyphomonas → Hyphomonas sp.758Open in IMG/M
3300021958|Ga0222718_10045830All Organisms → Viruses → Predicted Viral2812Open in IMG/M
3300021958|Ga0222718_10151418All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae1309Open in IMG/M
3300021958|Ga0222718_10156176All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1283Open in IMG/M
3300021959|Ga0222716_10190793All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300021959|Ga0222716_10552080Not Available638Open in IMG/M
3300021964|Ga0222719_10113934All Organisms → Viruses1958Open in IMG/M
3300021964|Ga0222719_10178737All Organisms → Viruses → Predicted Viral1471Open in IMG/M
3300021964|Ga0222719_10270741All Organisms → Viruses → Predicted Viral1117Open in IMG/M
3300021964|Ga0222719_10372807All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes897Open in IMG/M
3300022168|Ga0212027_1051351Not Available516Open in IMG/M
3300022178|Ga0196887_1052834Not Available1030Open in IMG/M
3300022183|Ga0196891_1015476All Organisms → Viruses → Predicted Viral1474Open in IMG/M
3300022183|Ga0196891_1027240Not Available1079Open in IMG/M
3300022187|Ga0196899_1063286All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1173Open in IMG/M
3300022200|Ga0196901_1035849All Organisms → Viruses1914Open in IMG/M
3300022923|Ga0255783_10078501All Organisms → Viruses → Predicted Viral1836Open in IMG/M
3300022928|Ga0255758_10021481All Organisms → Viruses → Predicted Viral4294Open in IMG/M
3300022929|Ga0255752_10215185All Organisms → cellular organisms → Bacteria884Open in IMG/M
(restricted) 3300024059|Ga0255040_10299960All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae671Open in IMG/M
3300024262|Ga0210003_1192544All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes842Open in IMG/M
3300024301|Ga0233451_10126434All Organisms → Viruses → Predicted Viral1213Open in IMG/M
3300025084|Ga0208298_1042064All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300025098|Ga0208434_1017967All Organisms → Viruses → Predicted Viral1810Open in IMG/M
3300025098|Ga0208434_1057307Not Available838Open in IMG/M
3300025108|Ga0208793_1117249All Organisms → Viruses730Open in IMG/M
3300025543|Ga0208303_1113391Not Available556Open in IMG/M
3300025645|Ga0208643_1013967All Organisms → Viruses → Predicted Viral2972Open in IMG/M
3300025652|Ga0208134_1064060All Organisms → Viruses → Predicted Viral1115Open in IMG/M
3300025671|Ga0208898_1041655All Organisms → Viruses → Predicted Viral1752Open in IMG/M
3300025671|Ga0208898_1064779Not Available1245Open in IMG/M
3300025687|Ga0208019_1008098All Organisms → Viruses → Predicted Viral4648Open in IMG/M
3300025687|Ga0208019_1078628Not Available1060Open in IMG/M
3300025759|Ga0208899_1042073All Organisms → Viruses → Predicted Viral2027Open in IMG/M
3300025759|Ga0208899_1057196All Organisms → Viruses → Predicted Viral1634Open in IMG/M
3300025759|Ga0208899_1098867Not Available1094Open in IMG/M
3300025769|Ga0208767_1036027All Organisms → Viruses → Predicted Viral2480Open in IMG/M
3300025769|Ga0208767_1114862All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1046Open in IMG/M
3300025828|Ga0208547_1101466Not Available885Open in IMG/M
3300025840|Ga0208917_1160458Not Available775Open in IMG/M
3300025853|Ga0208645_1104419All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1165Open in IMG/M
3300025853|Ga0208645_1117404All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1068Open in IMG/M
3300025870|Ga0209666_1302328All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes632Open in IMG/M
3300031565|Ga0307379_11535335Not Available529Open in IMG/M
3300032257|Ga0316205_10338894Not Available519Open in IMG/M
3300034418|Ga0348337_040602All Organisms → Viruses → Predicted Viral1995Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous43.48%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh16.52%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water9.57%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine6.96%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water4.35%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.48%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.61%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.74%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.74%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.87%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.87%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.87%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.87%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.87%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.87%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.87%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.87%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005821Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020194Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022923Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaGEnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024301Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300032257Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyriteEnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1021520023300000116MarineMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDXXW*
Ga0074648_106277923300005512Saline Water And SedimentMENKMAVTWTIANMERDLVQGDNTDIVTILHWRATDEDAD
Ga0078746_108720013300005821Marine SedimentMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDDNGN
Ga0075474_1005216813300006025AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTVGV
Ga0075478_1000525833300006026AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTVG
Ga0075478_1010670713300006026AqueousMAITWAIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGT
Ga0075466_102604433300006029AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNTGSAYG
Ga0075466_111465123300006029AqueousMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDDNGNTGSAYGT
Ga0098048_122868223300006752MarineMAVTWTIGNMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGV
Ga0098055_110954423300006793MarineMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGV
Ga0070749_1027285733300006802AqueousMAVTWTITNMERDLVQGDNTDIVTILHWRASDEDSDGNT
Ga0070749_1038639113300006802AqueousMAITWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAY
Ga0070754_1009605823300006810AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDS
Ga0075476_1002497423300006867AqueousMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTVGVT
Ga0075476_1009665723300006867AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDN
Ga0075481_1003144523300006868AqueousMENKMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDDNGNTGSAYGTV
Ga0075477_1017069323300006869AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSD
Ga0070750_1006500723300006916AqueousMENKMAVTWTIGTMERDLVQGDNTDIVTTLHWRAS
Ga0070746_1019360723300006919AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRATDEDDNGNIGSAYGTVGVT
Ga0070748_110098513300006920AqueousMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDDN
Ga0070745_108380643300007344AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDAN
Ga0070752_113313823300007345AqueousMASQIKENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDG
Ga0099851_105451713300007538AqueousMEYKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTG
Ga0099851_117371423300007538AqueousMEYKMAVTWTIANMERDLVQGDNTDIVTILHWRASD
Ga0099849_129303423300007539AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTG
Ga0099847_103368623300007540AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYG
Ga0099847_107002423300007540AqueousMEYKMAVTWTIANMERDLVQGDNTDIVTILHWRASDE
Ga0099847_109259713300007540AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASD
Ga0099846_121478923300007542AqueousMEYKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNTGSAYGT
Ga0070751_138079613300007640AqueousMAVTWTITNMERDLVQGDNTDIVTILHWRASDEDSDG
Ga0102954_120717313300007778WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTV
Ga0099850_122696313300007960AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSA
Ga0075480_1051614233300008012AqueousMAITWAIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTV
Ga0102960_107412213300009000Pond WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRATDSDADGNTG
Ga0102963_100926013300009001Pond WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDAD
Ga0102963_104094123300009001Pond WaterMEYKMAVTWTIANMERDLVQGDNTDIVTILHWRAS
Ga0102963_106903523300009001Pond WaterMASQIKENKMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDG
Ga0102957_126486513300009027Pond WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTGS
Ga0118687_1009283013300009124SedimentMAVTWTIGTMERDLVQGDNTDIVTVLHWRATDEDADGN
Ga0114908_124090323300009418Deep OceanMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDLDGN
Ga0115546_135284813300009435Pelagic MarineMAVTWKIENMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTVGVT
Ga0098049_123780623300010149MarineMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTGSAY
Ga0098056_109870423300010150MarineMENKMAVTWTIGTMERDLVQGDNTDIVTTLHWRATDSDADGNTGSA*
Ga0129342_112668423300010299Freshwater To Marine Saline GradientMAVTWTIVNMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAY
Ga0136656_117758323300010318Freshwater To Marine Saline GradientMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYG
Ga0129324_1041100213300010368Freshwater To Marine Saline GradientMENKMAVTWTIANMERDLVQGDNTDIVTVLHWTASDEDSD
Ga0181403_106761023300017710SeawaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDGNT
Ga0181552_1008537813300017824Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDAD
Ga0181576_1009919313300017985Salt MarshMENKMAVTWTIANMERDLVQGDNTDIVTILHWRAS
Ga0181600_1038510913300018036Salt MarshMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDAD
Ga0181601_1070882313300018041Salt MarshMENKMAVTWTIANMERDLMQGDNTDIVTILHWRASDEDSDGNTGSAY
Ga0181606_1012163213300018048Salt MarshMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSA
Ga0181553_1015064613300018416Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTG
Ga0181553_1024333423300018416Salt MarshMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDG
Ga0181553_1032328023300018416Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDG
Ga0181563_1007174723300018420Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADG
Ga0181563_1030948113300018420Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSD
Ga0181564_1077626223300018876Salt MarshMVVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSA
Ga0194024_107796523300019765FreshwaterMAVTWNIVNMERDLVQGDNTDIVTILHWTAKDEDADGNTGSNYGTVSVTLV
Ga0194024_116440813300019765FreshwaterMAVTWTITNMERDLVQGDNTDIVTILHWRASDEDSDGNTGAS
Ga0181595_1017124923300020053Salt MarshMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGV
Ga0181602_1034998913300020173Salt MarshMENKMAVTWTIANMERDLMQGDNTDIVTILHWRASDEDSDGNTGSAYGT
Ga0181604_1015750813300020191Salt MarshMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDGNTGS
Ga0181597_1009316413300020194Salt MarshMAVTWTIANMERDLMQGDNTDIVTILHWRASDEDS
Ga0213860_1040231623300021368SeawaterMAVTWTIANMERDLVQGDHTDIVTILHWRASDEDADGNTGS
Ga0213865_1042673223300021373SeawaterMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDDGNTG
Ga0213865_1045310113300021373SeawaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYG
Ga0213864_1019258113300021379SeawaterMAVTWTIANMERDLVQGDHTDIVTILHWRASDEDADGNTGSAYG
Ga0222717_1004317723300021957Estuarine WaterMENKMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGN
Ga0222717_1040146823300021957Estuarine WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDG
Ga0222718_1004583013300021958Estuarine WaterMAVTWTIGTMERDLVQGDNTDIVTILHWTAKDEDA
Ga0222718_1015141823300021958Estuarine WaterMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTV
Ga0222718_1015617613300021958Estuarine WaterMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGT
Ga0222716_1019079313300021959Estuarine WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGN
Ga0222716_1055208023300021959Estuarine WaterMAVTWTITNMERDLVQGDNTDIVTILHWRASDEDSDGNTGASY
Ga0222719_1011393433300021964Estuarine WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNT
Ga0222719_1017873723300021964Estuarine WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSD
Ga0222719_1027074123300021964Estuarine WaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTGSA
Ga0222719_1037280713300021964Estuarine WaterMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGAT
Ga0212027_105135113300022168AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNG
Ga0196887_105283413300022178AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNT
Ga0196891_101547613300022183AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNT
Ga0196891_102724013300022183AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGN
Ga0196899_106328623300022187AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNTGSAYGTVGVT
Ga0196901_103584913300022200AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDN
Ga0255783_1007850113300022923Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGV
Ga0255758_1002148143300022928Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGN
Ga0255752_1021518513300022929Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGVT
(restricted) Ga0255040_1029996023300024059SeawaterMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGVTLV
Ga0210003_119254413300024262Deep SubsurfaceMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAYGTVGVT
Ga0233451_1012643413300024301Salt MarshMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGVTL
Ga0208298_104206413300025084MarineMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTGSAYGTVGVT
Ga0208434_101796713300025098MarineMAVTWTIGNMERDLVQGDNTDIVTILHWRASDEDADGNT
Ga0208434_105730723300025098MarineMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDADGNTG
Ga0208793_111724923300025108MarineMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDA
Ga0208303_111339113300025543AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAY
Ga0208643_101396713300025645AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGS
Ga0208134_106406023300025652AqueousMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDDNGNTG
Ga0208898_104165513300025671AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNT
Ga0208898_106477933300025671AqueousMAVTWNIATMERDLVQGDNTDIVTILHWTAKDEDADGNTGSAYGAVG
Ga0208019_100809813300025687AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNAGSAYGTV
Ga0208019_107862813300025687AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDA
Ga0208899_104207323300025759AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGN
Ga0208899_105719613300025759AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNT
Ga0208899_109886713300025759AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRAT
Ga0208767_103602713300025769AqueousMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDE
Ga0208767_111486223300025769AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGN
Ga0208547_110146633300025828AqueousMAITWAIANMERDLVQGDNTDIVTILHWRASDEDSDGNTGSAY
Ga0208917_116045813300025840AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDD
Ga0208645_110441913300025853AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDSDGNT
Ga0208645_111740413300025853AqueousMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNTGS
Ga0209666_130232813300025870MarineMAVTWTIGTMERDLVQGDNTDIVTTLHWRASDEDSD
Ga0307379_1153533523300031565SoilMENKMAVTWTIANMERDLVQGDNTDIVTILHWRASDEDDNGNTGS
Ga0316205_1033889423300032257Microbial MatMENKMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDDNGNT
Ga0348337_040602_1868_19933300034418AqueousMAVTWTIGTMERDLVQGDNTDIVTILHWRASDEDSDGNTGSA


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