Basic Information | |
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Family ID | F079878 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 115 |
Average Sequence Length | 71 residues |
Representative Sequence | RNASSRPGGKAGVDHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ |
Number of Associated Samples | 106 |
Number of Associated Scaffolds | 115 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.87 % |
% of genes near scaffold ends (potentially truncated) | 98.26 % |
% of genes from short scaffolds (< 2000 bps) | 95.65 % |
Associated GOLD sequencing projects | 95 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (89.565 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (6.957 % of family members) |
Environment Ontology (ENVO) | Unclassified (49.565 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (61.739 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 21.87% β-sheet: 15.62% Coil/Unstructured: 62.50% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 115 Family Scaffolds |
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PF12804 | NTP_transf_3 | 12.17 |
PF13360 | PQQ_2 | 6.96 |
PF00483 | NTP_transferase | 4.35 |
PF13620 | CarboxypepD_reg | 2.61 |
PF00072 | Response_reg | 1.74 |
PF13570 | PQQ_3 | 1.74 |
PF07589 | PEP-CTERM | 1.74 |
PF12704 | MacB_PCD | 1.74 |
PF11954 | DUF3471 | 0.87 |
PF05685 | Uma2 | 0.87 |
PF00326 | Peptidase_S9 | 0.87 |
PF02597 | ThiS | 0.87 |
PF13442 | Cytochrome_CBB3 | 0.87 |
PF13649 | Methyltransf_25 | 0.87 |
PF07638 | Sigma70_ECF | 0.87 |
PF10282 | Lactonase | 0.87 |
PF11903 | ParD_like | 0.87 |
PF07676 | PD40 | 0.87 |
PF02371 | Transposase_20 | 0.87 |
PF15919 | HicB_lk_antitox | 0.87 |
PF00034 | Cytochrom_C | 0.87 |
PF01436 | NHL | 0.87 |
PF00190 | Cupin_1 | 0.87 |
COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
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COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 0.87 |
COG1977 | Molybdopterin synthase sulfur carrier subunit MoaD | Coenzyme transport and metabolism [H] | 0.87 |
COG2104 | Sulfur carrier protein ThiS (thiamine biosynthesis) | Coenzyme transport and metabolism [H] | 0.87 |
COG3547 | Transposase | Mobilome: prophages, transposons [X] | 0.87 |
COG4636 | Endonuclease, Uma2 family (restriction endonuclease fold) | General function prediction only [R] | 0.87 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 89.57 % |
Unclassified | root | N/A | 10.43 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000550|F24TB_11145573 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 935 | Open in IMG/M |
3300000559|F14TC_100241737 | All Organisms → cellular organisms → Bacteria | 1499 | Open in IMG/M |
3300004052|Ga0055490_10156409 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 672 | Open in IMG/M |
3300004156|Ga0062589_101369327 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 688 | Open in IMG/M |
3300004480|Ga0062592_100392149 | All Organisms → cellular organisms → Bacteria | 1100 | Open in IMG/M |
3300005186|Ga0066676_10017396 | All Organisms → cellular organisms → Bacteria | 3687 | Open in IMG/M |
3300005290|Ga0065712_10176753 | Not Available | 1214 | Open in IMG/M |
3300005293|Ga0065715_10100504 | All Organisms → cellular organisms → Bacteria | 3296 | Open in IMG/M |
3300005293|Ga0065715_10894472 | Not Available | 577 | Open in IMG/M |
3300005328|Ga0070676_11494629 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 520 | Open in IMG/M |
3300005332|Ga0066388_103624843 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 788 | Open in IMG/M |
3300005333|Ga0070677_10244966 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 887 | Open in IMG/M |
3300005343|Ga0070687_101260125 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 547 | Open in IMG/M |
3300005354|Ga0070675_101277639 | All Organisms → cellular organisms → Bacteria | 676 | Open in IMG/M |
3300005364|Ga0070673_100581575 | All Organisms → cellular organisms → Bacteria | 1020 | Open in IMG/M |
3300005444|Ga0070694_101118548 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 658 | Open in IMG/M |
3300005445|Ga0070708_101482979 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 632 | Open in IMG/M |
3300005446|Ga0066686_10871062 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium | 594 | Open in IMG/M |
3300005447|Ga0066689_10326463 | All Organisms → cellular organisms → Bacteria | 955 | Open in IMG/M |
3300005459|Ga0068867_100204816 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1581 | Open in IMG/M |
3300005467|Ga0070706_101968611 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 530 | Open in IMG/M |
3300005518|Ga0070699_100251734 | All Organisms → cellular organisms → Bacteria | 1578 | Open in IMG/M |
3300005546|Ga0070696_100463053 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1002 | Open in IMG/M |
3300005546|Ga0070696_101540802 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 570 | Open in IMG/M |
3300005578|Ga0068854_101098972 | All Organisms → cellular organisms → Bacteria | 708 | Open in IMG/M |
3300005614|Ga0068856_100692892 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1039 | Open in IMG/M |
3300005840|Ga0068870_11155552 | All Organisms → cellular organisms → Bacteria | 559 | Open in IMG/M |
3300005843|Ga0068860_102305294 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 559 | Open in IMG/M |
3300005844|Ga0068862_101917558 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 602 | Open in IMG/M |
3300006794|Ga0066658_10070268 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1566 | Open in IMG/M |
3300006806|Ga0079220_11866440 | Not Available | 532 | Open in IMG/M |
3300006844|Ga0075428_100345281 | All Organisms → cellular organisms → Bacteria | 1598 | Open in IMG/M |
3300006904|Ga0075424_101850722 | All Organisms → cellular organisms → Bacteria | 638 | Open in IMG/M |
3300006954|Ga0079219_10211371 | Not Available | 1112 | Open in IMG/M |
3300007076|Ga0075435_100965291 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 744 | Open in IMG/M |
3300009012|Ga0066710_101181676 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1185 | Open in IMG/M |
3300009090|Ga0099827_11829700 | Not Available | 529 | Open in IMG/M |
3300009094|Ga0111539_12986123 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 547 | Open in IMG/M |
3300009147|Ga0114129_10123073 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 3568 | Open in IMG/M |
3300009162|Ga0075423_12422762 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 572 | Open in IMG/M |
3300009174|Ga0105241_12210190 | Not Available | 546 | Open in IMG/M |
3300009176|Ga0105242_10811464 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium | 927 | Open in IMG/M |
3300009176|Ga0105242_11640853 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 678 | Open in IMG/M |
3300009177|Ga0105248_10169285 | All Organisms → cellular organisms → Bacteria | 2462 | Open in IMG/M |
3300009177|Ga0105248_10207850 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2206 | Open in IMG/M |
3300009177|Ga0105248_10418530 | All Organisms → cellular organisms → Bacteria | 1509 | Open in IMG/M |
3300010040|Ga0126308_10599351 | All Organisms → cellular organisms → Bacteria | 751 | Open in IMG/M |
3300010043|Ga0126380_10673476 | Not Available | 827 | Open in IMG/M |
3300010047|Ga0126382_10725760 | Not Available | 837 | Open in IMG/M |
3300010303|Ga0134082_10043961 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1704 | Open in IMG/M |
3300010336|Ga0134071_10337865 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 760 | Open in IMG/M |
3300010337|Ga0134062_10104065 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1221 | Open in IMG/M |
3300010366|Ga0126379_11902020 | All Organisms → cellular organisms → Bacteria | 698 | Open in IMG/M |
3300010373|Ga0134128_12688057 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 548 | Open in IMG/M |
3300010400|Ga0134122_12292363 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b | 585 | Open in IMG/M |
3300011271|Ga0137393_10990461 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 716 | Open in IMG/M |
3300011416|Ga0137422_1073847 | Not Available | 820 | Open in IMG/M |
3300012199|Ga0137383_11251024 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 531 | Open in IMG/M |
3300012200|Ga0137382_10360430 | All Organisms → cellular organisms → Bacteria | 1021 | Open in IMG/M |
3300012207|Ga0137381_10331337 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1326 | Open in IMG/M |
3300012469|Ga0150984_116613953 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 632 | Open in IMG/M |
3300012923|Ga0137359_11525823 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29 | 556 | Open in IMG/M |
3300012948|Ga0126375_10469449 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 930 | Open in IMG/M |
3300012951|Ga0164300_10869216 | All Organisms → cellular organisms → Bacteria | 567 | Open in IMG/M |
3300012955|Ga0164298_10843569 | All Organisms → cellular organisms → Bacteria | 660 | Open in IMG/M |
3300013308|Ga0157375_11496273 | All Organisms → cellular organisms → Bacteria | 797 | Open in IMG/M |
3300014326|Ga0157380_11460301 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 736 | Open in IMG/M |
3300014745|Ga0157377_10138078 | All Organisms → cellular organisms → Bacteria | 1495 | Open in IMG/M |
3300015241|Ga0137418_10803136 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 705 | Open in IMG/M |
3300015255|Ga0180077_1042843 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 | 882 | Open in IMG/M |
3300015371|Ga0132258_12413915 | All Organisms → cellular organisms → Bacteria | 1317 | Open in IMG/M |
3300015374|Ga0132255_101560158 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1000 | Open in IMG/M |
3300015374|Ga0132255_106161461 | All Organisms → cellular organisms → Bacteria | 507 | Open in IMG/M |
3300017943|Ga0187819_10601264 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 623 | Open in IMG/M |
3300018476|Ga0190274_13778530 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 512 | Open in IMG/M |
3300019212|Ga0180106_1248294 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium | 636 | Open in IMG/M |
3300019228|Ga0180119_1334205 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 | 758 | Open in IMG/M |
3300019279|Ga0184642_1701681 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 522 | Open in IMG/M |
3300021080|Ga0210382_10286365 | All Organisms → cellular organisms → Bacteria | 724 | Open in IMG/M |
3300022195|Ga0222625_1193949 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 | 774 | Open in IMG/M |
3300025893|Ga0207682_10335270 | All Organisms → cellular organisms → Bacteria | 711 | Open in IMG/M |
3300025899|Ga0207642_11034674 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 529 | Open in IMG/M |
3300025907|Ga0207645_11146143 | Not Available | 523 | Open in IMG/M |
3300025908|Ga0207643_10242375 | All Organisms → cellular organisms → Bacteria | 1109 | Open in IMG/M |
3300025911|Ga0207654_11423563 | Not Available | 505 | Open in IMG/M |
3300025921|Ga0207652_11468859 | All Organisms → cellular organisms → Bacteria | 586 | Open in IMG/M |
3300025925|Ga0207650_11777805 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 522 | Open in IMG/M |
3300025926|Ga0207659_10467756 | All Organisms → cellular organisms → Bacteria | 1064 | Open in IMG/M |
3300025934|Ga0207686_10753246 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 778 | Open in IMG/M |
3300025936|Ga0207670_10994465 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 705 | Open in IMG/M |
3300025936|Ga0207670_11724245 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 533 | Open in IMG/M |
3300025937|Ga0207669_11828578 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 519 | Open in IMG/M |
3300025941|Ga0207711_11261413 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 681 | Open in IMG/M |
3300025942|Ga0207689_10419836 | All Organisms → cellular organisms → Bacteria | 1116 | Open in IMG/M |
3300025942|Ga0207689_11462737 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 571 | Open in IMG/M |
3300025945|Ga0207679_11828232 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 555 | Open in IMG/M |
3300025960|Ga0207651_10511615 | All Organisms → cellular organisms → Bacteria | 1039 | Open in IMG/M |
3300025986|Ga0207658_10191249 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1701 | Open in IMG/M |
3300026035|Ga0207703_11098687 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium | 764 | Open in IMG/M |
3300026078|Ga0207702_12262740 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 532 | Open in IMG/M |
3300026088|Ga0207641_10221149 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1756 | Open in IMG/M |
3300026088|Ga0207641_12078942 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 569 | Open in IMG/M |
3300026313|Ga0209761_1132732 | Not Available | 1195 | Open in IMG/M |
3300028381|Ga0268264_10169202 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1975 | Open in IMG/M |
3300028536|Ga0137415_10825050 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 737 | Open in IMG/M |
3300031184|Ga0307499_10318216 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 518 | Open in IMG/M |
3300031716|Ga0310813_10438156 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1131 | Open in IMG/M |
3300031720|Ga0307469_11019329 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 774 | Open in IMG/M |
3300031740|Ga0307468_101467700 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 630 | Open in IMG/M |
3300031908|Ga0310900_10558928 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 898 | Open in IMG/M |
3300032179|Ga0310889_10233760 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 864 | Open in IMG/M |
3300032421|Ga0310812_10578086 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 504 | Open in IMG/M |
3300032770|Ga0335085_11504615 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 701 | Open in IMG/M |
3300034667|Ga0314792_056916 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 | 877 | Open in IMG/M |
3300034674|Ga0314799_031037 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium | 602 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.96% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 6.09% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.22% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.22% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 5.22% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.22% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.22% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 4.35% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.48% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.48% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.48% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 2.61% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.61% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.61% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.61% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.61% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.61% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.74% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.74% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.74% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.74% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.74% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.74% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.74% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.74% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.74% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.87% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.87% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.87% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.87% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.87% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.87% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.87% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.87% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.87% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000550 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly | Environmental | Open in IMG/M |
3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
3300004052 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
3300005447 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 | Environmental | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010303 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015 | Environmental | Open in IMG/M |
3300010336 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015 | Environmental | Open in IMG/M |
3300010337 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
3300011416 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2 | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015255 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300019212 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019228 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019279 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026313 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
3300034667 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034674 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
F24TB_111455732 | 3300000550 | Soil | TFGDNILIPRNASSRPGGKVGVDHIAYTLANWDSDKAVKPAVEAELKRRGLNIRVTEGSFHVQDXXXXXXXMGGKKQ* |
F14TC_1002417372 | 3300000559 | Soil | PGGKMGVDHIAYTLANWDTDSKVKPAVEAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKNQ* |
Ga0055490_101564091 | 3300004052 | Natural And Restored Wetlands | PRTASSRPGGRVSIDHIAYTLANWDTDKSVRSSMEAELKRRNLEIRSTEGGFHVKDPDGFEVQMGGKKQ* |
Ga0062589_1013693272 | 3300004156 | Soil | IPRNAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEVELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKEQ* |
Ga0062592_1003921492 | 3300004480 | Soil | SREGGKVSIDHIAYTLANWDTDKSVRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKDQ* |
Ga0066676_100173961 | 3300005186 | Soil | LTFGDNILIPRNASSRPGGKVGVDHIAYTLASWDTDKTVKPAVEAELKRRGLKIRATEGSFHVQDPDGFEVQMGGKTQ* |
Ga0065712_101767532 | 3300005290 | Miscanthus Rhizosphere | ARNAAARPGGKVGVDHIAYTLAGWDTDPKIKAAMDAELKRRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0065715_101005041 | 3300005293 | Miscanthus Rhizosphere | PGGKAGVDHIAYTLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0065715_108944722 | 3300005293 | Miscanthus Rhizosphere | RNAAARPGGKVGVDHIAYTLAGWDADPKIKAAMDAELKRRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0070676_114946291 | 3300005328 | Miscanthus Rhizosphere | RNAASRPGGKVGIDHIAYTLAGWDTDKSVKPAVEAELKKRGLNIRTTEGSFHVQDPDGFEVQMGGKNQ* |
Ga0066388_1036248432 | 3300005332 | Tropical Forest Soil | SRPGGKVGVDHIAYTLANWDSDKTVKPAVEAELKKRGLNIRVTEGSFHVADPDGFEVQMGGKKQ* |
Ga0070677_102449661 | 3300005333 | Miscanthus Rhizosphere | GVDHIAYTLANWDTDKTVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ* |
Ga0070687_1012601251 | 3300005343 | Switchgrass Rhizosphere | GGKAGVDHIAYTLANWDTDKTVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ* |
Ga0070675_1012776391 | 3300005354 | Miscanthus Rhizosphere | GGKPGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0070673_1005815752 | 3300005364 | Switchgrass Rhizosphere | EDNGKTECTLAFGQNTIIARNAAGRPGGKAGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0070694_1011185482 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | CRLTFGDNIIIPRNAAARPGGKVGIDHIAYTLAGWDTDKSVKPAVEAELKRRGLMIRTTEGSFHVADPDGFEVQMGGKNQ* |
Ga0070708_1014829792 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | DNIVIARNAGSRPGGKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLQIRVTEGSFHVPDPDGFEVQMGGKNQ* |
Ga0066686_108710622 | 3300005446 | Soil | CRLTFGDNILIARNAGSRPGGKVEIDHIAYTLANWDTDKTVKPAVEAELKRRGLKIRATEGSFHVQDPDGFEVQMGGKTQ* |
Ga0066689_103264632 | 3300005447 | Soil | AGKVDHIAYTIAGWDTDKSVKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ* |
Ga0068867_1002048163 | 3300005459 | Miscanthus Rhizosphere | LIPRNASSRPGGKVGVDHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ* |
Ga0070706_1019686112 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | ARNASSRPGGKVGVDHIAYTLANWDTDKTVRPAVEAELNRRGLKIRVTEGSFHVQDPDGFEVQMGGKTQ* |
Ga0070699_1002517343 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | VDHIAYTLENWDTDNKSVRPAMEAELKRRGLKGTSNEGGFHVTDPDGIGVQMGGKKQ* |
Ga0070696_1004630532 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | PGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKQQ* |
Ga0070696_1015408021 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | GVDHIAYTLENWDTDNKSVRPAMEAELKRRGLKMTSNEGGFHVTDPDGLGVQMGGKKQ* |
Ga0068854_1010989722 | 3300005578 | Corn Rhizosphere | RPGGKPGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0068856_1006928921 | 3300005614 | Corn Rhizosphere | GMKVEEDNGKTECTLAFGQNTIIARNAAGRPGAKIGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0068870_111555522 | 3300005840 | Miscanthus Rhizosphere | RNASSRPGGKAGVDHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0068860_1023052942 | 3300005843 | Switchgrass Rhizosphere | CRLSFGDNIVIARNASSRPGGKVGVDHIAYTLAGWDTDKSVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKQQ* |
Ga0068862_1019175581 | 3300005844 | Switchgrass Rhizosphere | RLTFGDNILIPRNASSRPGGKAGVDHIAYTLANWDTDKSVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ* |
Ga0066658_100702681 | 3300006794 | Soil | ASRPGAKVGVDHIAYTLANWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0079220_118664402 | 3300006806 | Agricultural Soil | CTLGFGNNTIIARNAAGRPGGKVGVDHIAYTLAGWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0075428_1003452811 | 3300006844 | Populus Rhizosphere | ILIPRNASSRPGGKPGVDHIAYTLANWDTDKSVKPAVEAELKRRKLTIRVTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0075424_1018507222 | 3300006904 | Populus Rhizosphere | FGDNILIPRNASSRPGGKRGVDHIAYTLANWDSDPKVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0079219_102113712 | 3300006954 | Agricultural Soil | GVDHIAYTLAGWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0075435_1009652911 | 3300007076 | Populus Rhizosphere | PGGKLGVDHIAYTLANWDTDKKVRPAVEAELKRRGLNIRTTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0066710_1011816763 | 3300009012 | Grasslands Soil | GVDHIAYSLANWDTDKTVKPAVEAELKRRGLKIRTTEGSFHIEDPDGFEVQMGGKTQ |
Ga0099827_118297001 | 3300009090 | Vadose Zone Soil | NASSRPSDTKGVDHIAYSIANWDTDKKVKEAVGAELKRRGLEVRETTGSFHIKDPGGFEVQMGGKDQ* |
Ga0111539_129861231 | 3300009094 | Populus Rhizosphere | TATSRPGGKVGVDHIAYTLENWDTDNKSVRPAMEAELKRRGLKMTSNEGGFHVTDPDGLGVQMGGKKQ* |
Ga0114129_101230734 | 3300009147 | Populus Rhizosphere | RNASSRPGGKVGIDHVAYSLANWDTDKTVKPAVEAELKRRGLMIRATEGSFHVQDPDGFEVQMGGKTQ* |
Ga0075423_124227621 | 3300009162 | Populus Rhizosphere | NASSRPGGKVGVDHIAYTLANWDTDKTVRPAVEAELNRRGLKIRVTEGSFHVQDPDGFEVQMGGKTQ* |
Ga0105241_122101901 | 3300009174 | Corn Rhizosphere | TLAFGQNTIIARNAAGRPGGKMGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0105242_108114642 | 3300009176 | Miscanthus Rhizosphere | GMKVSNDDGKQCRLTFGDNILIARNASERPGAKVGIDHIAYTLAGGDTDKSVKPAVEAELKRRGLMIRTTEGSFHVADPDGFEVQMGGKNQ* |
Ga0105242_116408532 | 3300009176 | Miscanthus Rhizosphere | VDHIAYTLANWDTDKAVRPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0105248_101692851 | 3300009177 | Switchgrass Rhizosphere | NASSRPGGKAGVDHIAYTLANWDTDKSVKPAVEAELKKRGLNIRVTEGSFHVPDPDGLEVQMGGKKQ* |
Ga0105248_102078504 | 3300009177 | Switchgrass Rhizosphere | CNAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ* |
Ga0105248_104185301 | 3300009177 | Switchgrass Rhizosphere | GGKAGVDHIAYTLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0126308_105993512 | 3300010040 | Serpentine Soil | LGFGDNTIIARNAASRPGGKVGIDHIAYTLANWDTDKSIKAAMEAELKRRGLMIRVTNNSFHVQDPDGLEVQMGGKDQ* |
Ga0126380_106734761 | 3300010043 | Tropical Forest Soil | GKVDHIAYTIAGWDTDKNVKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ* |
Ga0126382_107257602 | 3300010047 | Tropical Forest Soil | NRPPAGKVDHIAYTIAGWDTDKNVKPDVEAELKRRGLQVRTTEGSFHVQDPEGFEVQMGGKEQ* |
Ga0134082_100439614 | 3300010303 | Grasslands Soil | NASSRPGGKVGVDHIAYTLANWDTDKTVKPAVEAELKRRGLKIRTTERSFHVQDPDGFEAQMGGKTQ* |
Ga0134071_103378651 | 3300010336 | Grasslands Soil | RPGGKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ* |
Ga0134062_101040651 | 3300010337 | Grasslands Soil | DHIAYTLANWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGFEVQMGGKTQ* |
Ga0126379_119020201 | 3300010366 | Tropical Forest Soil | DDGKTECTLRFGDNSIIARNAAGRPGGKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRVTGNSFHVQDPDGFEVQMGGKEQ* |
Ga0134128_126880571 | 3300010373 | Terrestrial Soil | DGKNECTLRFGDNTIIARNAAGRPGGKVGVDHIAYTLAGWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0134122_122923631 | 3300010400 | Terrestrial Soil | NLIIPRNAASRPGGKVGIDHIAYTLAGWDTDKNVKPAVEAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKKQ* |
Ga0137393_109904611 | 3300011271 | Vadose Zone Soil | FGDNILIARNAGSRPGGKVGVDHIAYTLANWDTDKTVKLTVEAELKRRGLKIRATEGSYHVQDPDGFEVQMGGKTQ* |
Ga0137422_10738472 | 3300011416 | Soil | VGVDHVAYSLANWDTDKTVKPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ* |
Ga0137383_112510241 | 3300012199 | Vadose Zone Soil | IARNASSRPGGKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFQVQMGGKTQ* |
Ga0137382_103604303 | 3300012200 | Vadose Zone Soil | IDHIAYTMANWDTDPKIKAAMDAELKKRGLMIRVTNNSFHVQDPDGNEVQMGGKEQ* |
Ga0137381_103313371 | 3300012207 | Vadose Zone Soil | SRPGGKVEIDHIAYTLANWDTDKTVKPAVEAELKRRGLKIRATEGSFHVQDPDGFEVQMGGKTQ* |
Ga0150984_1166139532 | 3300012469 | Avena Fatua Rhizosphere | MSLGDNIVIARNASSRPGGKVGVDHVAYTLAGWDTDKSIKPAVEAELKRRGLMIRSTEGSFHVQDPDGFEVQMGGKQQ* |
Ga0137359_115258232 | 3300012923 | Vadose Zone Soil | VIARNASSRPGGKIGVDHVAYTLANWDTDKAVKPAVEAELKRRGLKVRTTEPSAENRRAGEEPSFMVEDPDGFQVQMGGKEQ* |
Ga0126375_104694491 | 3300012948 | Tropical Forest Soil | NRPPAGKVDHIAYTIAGWDTDKNVKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ* |
Ga0164300_108692161 | 3300012951 | Soil | SSRPGGKPGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0164298_108435691 | 3300012955 | Soil | KTECTLAFGQNTIIARNAAGRPGGKAGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0157375_114962731 | 3300013308 | Miscanthus Rhizosphere | MKVEGDNGKTECTLAFGQNTIIARNAAGRPGGKMGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0157380_114603011 | 3300014326 | Switchgrass Rhizosphere | QCRLTFGNNIIIPRNAASREGGKVSIDHIAYTLANWDTDKSVRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKTQ* |
Ga0157377_101380781 | 3300014745 | Miscanthus Rhizosphere | NTIIARNAAARPGGKVGVDHIAYTLAGWDTDPKIKAAMDAELKRRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0137418_108031361 | 3300015241 | Vadose Zone Soil | DNLLVPRNASSRPGGKVGIDHIAYSLANWDTDKSVKPAVEAELKKRGLQIRTTEGSFHVQDPDGFEVQMGGKTQ* |
Ga0180077_10428431 | 3300015255 | Soil | ILIARTASSRPGGKMGIDHIAYTLENWDTDNKSVRPAMEAELKRRWLKMTSNEGGFHVTDPDGVGVQMGGKKQ* |
Ga0132258_124139153 | 3300015371 | Arabidopsis Rhizosphere | MGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0132255_1015601583 | 3300015374 | Arabidopsis Rhizosphere | GVNHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ* |
Ga0132255_1061614612 | 3300015374 | Arabidopsis Rhizosphere | MKVSGDNGKTECTLGFGNNTIIARNAASRPGAKVGVDHIAYTLANWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ* |
Ga0187819_106012641 | 3300017943 | Freshwater Sediment | GKQCRLSVGDSLLIPRNASSRSSGTKGVDHIAYTLANWDTDTKVREAVGAELKRRGLEIRETPGSFHIKDPDGFEVQMGGKEQ |
Ga0190274_137785302 | 3300018476 | Soil | FGPNILIARTASSRPGGKMGIDHIAYSLENWDADKTVRPAMEAELKRRGLKMTSNDNGFHVTDPDGIGVQMGGKKQ |
Ga0180106_12482941 | 3300019212 | Groundwater Sediment | MKVTDDNGKIQCRLAFGDNLLIPRTASSRPGGKVALDHVAYTLANWDTDKSVRSAVEAELKRRKLEIRTTEGGFHVKDPDGFEVQMGGKKQ |
Ga0180119_13342051 | 3300019228 | Groundwater Sediment | LEFGPNILIARTASSRPGGKMGIDHLAYSLENWDTDKSVRPAMEAELKRRGLKMTSNDNGFHVTDPDGIGVQMGGKKQ |
Ga0184642_17016811 | 3300019279 | Groundwater Sediment | NILIARTASSRPGGKVEIDHIAYTLANWDTDKSVKPAVEAELKRRGLTIRATEGSFHVQDPDGFEVQMGGKTQ |
Ga0210382_102863651 | 3300021080 | Groundwater Sediment | LTFGDNILIARNASSRAGGKVGVDHIAYTLANWDSDKTVKPTVEAELKRRGLNIRTTEGSFHVQDPDGFEVQMGGKTQ |
Ga0222625_11939491 | 3300022195 | Groundwater Sediment | GPNILIARTASSRPGGKMGIDHIAYSLENWDSDKSVRPAMEAELKRRGLKMTSNDGGFHVTDPDGIGVQMGGKKQ |
Ga0207682_103352701 | 3300025893 | Miscanthus Rhizosphere | RPGGKAGVDHIAYTLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ |
Ga0207642_110346742 | 3300025899 | Miscanthus Rhizosphere | PGGKVGVDHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ |
Ga0207645_111461431 | 3300025907 | Miscanthus Rhizosphere | ARNAAGRPGGKAGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207643_102423752 | 3300025908 | Miscanthus Rhizosphere | RNASSRPGGKAGVDHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ |
Ga0207654_114235631 | 3300025911 | Corn Rhizosphere | TLAFGQNTIIARNAAGRPGGKMGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207652_114688592 | 3300025921 | Corn Rhizosphere | VDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207650_117778052 | 3300025925 | Switchgrass Rhizosphere | IPRNAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ |
Ga0207659_104677563 | 3300025926 | Miscanthus Rhizosphere | GRPGGKPGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207686_107532462 | 3300025934 | Miscanthus Rhizosphere | GIDHIAYTLAGGDTDKSVKPAVEAELKRRGLMIRTTEGSFHVADPDGFEVQMGGKNQ |
Ga0207670_109944652 | 3300025936 | Switchgrass Rhizosphere | VNLEPASIIIPRNAASREGGKVSIDHIAYTLANWDTDKSVRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKDQ |
Ga0207670_117242451 | 3300025936 | Switchgrass Rhizosphere | NAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ |
Ga0207669_118285782 | 3300025937 | Miscanthus Rhizosphere | FGDNIIIPRNAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ |
Ga0207711_112614131 | 3300025941 | Switchgrass Rhizosphere | EEDNGKTECTLAFGQNTIIARNAAGRPGAKIGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207689_104198362 | 3300025942 | Miscanthus Rhizosphere | NIIIPRNAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ |
Ga0207689_114627371 | 3300025942 | Miscanthus Rhizosphere | SREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ |
Ga0207679_118282321 | 3300025945 | Corn Rhizosphere | LGFGNNTIIARNAAGRPGGKVGVDHIAYTLAGWDTDPKIKAAMDAELKRRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207651_105116152 | 3300025960 | Switchgrass Rhizosphere | SREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ |
Ga0207658_101912491 | 3300025986 | Switchgrass Rhizosphere | SRPGGKAGVDHIAYTLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ |
Ga0207703_110986871 | 3300026035 | Switchgrass Rhizosphere | CRLTFGDNIIIPRNAASREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ |
Ga0207702_122627402 | 3300026078 | Corn Rhizosphere | GMKVEEDNGKTECTLAFGQNTIIARNAAGRPGAKIGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0207641_102211491 | 3300026088 | Switchgrass Rhizosphere | GKGGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKEQ |
Ga0207641_120789422 | 3300026088 | Switchgrass Rhizosphere | VDHIAYTLANWDTDKAVKPAVEAELKRRGLTVRTTEGSFHVQDPDGFEVQMGGKTQ |
Ga0209761_11327322 | 3300026313 | Grasslands Soil | RNASSRPGGKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRRTEGSFHVQDPDGFEVQMGGKTQ |
Ga0268264_101692021 | 3300028381 | Switchgrass Rhizosphere | DNILIPRNASSRPGGKAGVDHIAYTLANWDTDKTVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ |
Ga0137415_108250501 | 3300028536 | Vadose Zone Soil | RPGGKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ |
Ga0307499_103182161 | 3300031184 | Soil | NASSRPGAKIGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ |
Ga0310813_104381561 | 3300031716 | Soil | FGMKVEGDNGKTECTLAFGQNTIIARNAAGRPGGKVGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0307469_110193293 | 3300031720 | Hardwood Forest Soil | CRLSFGDNIVIARNASSRPGGKVGVDHIAYTLAGWDTDKSVKPAVEAELKRRGLMIRTTEGSFHVPDPDGFEVQRGGKNQ |
Ga0307468_1014677002 | 3300031740 | Hardwood Forest Soil | GPNILIARTATSRPGGKVGVDHIAYTLENWDTDNKSVRPAMEAELKRRGLKMTSNEGGFHVTDPDGLGVQMGGKKQ |
Ga0310900_105589281 | 3300031908 | Soil | SREGGKVGIDHIAYSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKEQ |
Ga0310889_102337601 | 3300032179 | Soil | SSRPGGKVGVDHIAYTLANWDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ |
Ga0310812_105780862 | 3300032421 | Soil | KIEEDNGKTECTLAFGQNTIIARNAAGRPGGKAGVDHIAYTLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ |
Ga0335085_115046151 | 3300032770 | Soil | LIARNASSRPGGKVGVDHIAYTLANWDTDKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKNQ |
Ga0314792_056916_684_875 | 3300034667 | Soil | RPGGKPGVDHIAYSLENWDTDKTVRPAMEAELKRRGLKMTSNDNGFHVTDPDGIGVQMGGKKQ |
Ga0314799_031037_322_597 | 3300034674 | Soil | MKISVDDAKTLCRLTFGDNIIIPRNASSRRGGKAGVDHIAYTLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ |
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