Metagenome / Metatranscriptome Family F079761

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079761
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	81 residues
Representative Sequence	MANPGERSINIVKENKPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLPQGKASRKASR
Number of Associated Samples	105
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.74 %
% of genes near scaffold ends (potentially truncated)	32.17 %
% of genes from short scaffolds (< 2000 bps)	88.70 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.913 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.261 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.783 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13655	RVT_N	21.74
PF08388	GIIM	2.61
PF01844	HNH	2.61
PF04392	ABC_sub_bind	0.87
PF13359	DDE_Tnp_4	0.87
PF01047	MarR	0.87
PF12680	SnoaL_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.91 %
Unclassified	root	N/A	45.22 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.91 %
Unclassified	root	N/A	45.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.83 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.35 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	9.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9.57 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.35 %
Spirochaetes bacterium ADurb.Bin001	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	9.57 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	9.57 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.61 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.74 %
Spirochaetes bacterium ADurb.Bin001	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	9.57 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	5.22 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2.61 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.74 %
Spirochaetes bacterium ADurb.Bin001	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
unclassified Paraburkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia	9.57 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	5.22 %
Desulfonema	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema	1.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.74 %
Desulfobacula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula	0.87 %
Spirochaetes bacterium ADurb.Bin001	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Paraburkholderia sp. BL6665CI2N2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	9.57 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	5.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.74 %
Desulfobacula toluolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	0.87 %
Desulfonema limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	0.87 %
Spirochaetes bacterium ADurb.Bin001	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Paraburkholderia sp. BL6665CI2N2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	9.57 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	5.22 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.74 %
Desulfobacula toluolica Tol2	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica → Desulfobacula toluolica Tol2	0.87 %
Desulfonema limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	0.87 %
Spirochaetes bacterium ADurb.Bin001	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908021\|BSRL3_Contig_9935	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300001661\|JGI12053J15887_10307963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	773	Open in IMG/M
3300004463\|Ga0063356_101041041	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300004633\|Ga0066395_10094790	Not Available	1426	Open in IMG/M
3300005172\|Ga0066683_10353505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	912	Open in IMG/M
3300005180\|Ga0066685_10428411	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005187\|Ga0066675_10272594	Not Available	1216	Open in IMG/M
3300005332\|Ga0066388_102005452	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005332\|Ga0066388_105155152	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300005341\|Ga0070691_10697095	Not Available	609	Open in IMG/M
3300005556\|Ga0066707_10665702	Not Available	657	Open in IMG/M
3300005713\|Ga0066905_100044035	All Organisms → cellular organisms → Bacteria	2674	Open in IMG/M
3300005719\|Ga0068861_100049790	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300005719\|Ga0068861_101420194	Not Available	678	Open in IMG/M
3300005764\|Ga0066903_104289010	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	762	Open in IMG/M
3300006049\|Ga0075417_10016124	All Organisms → cellular organisms → Bacteria	2901	Open in IMG/M
3300006844\|Ga0075428_100500986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	1299	Open in IMG/M
3300006846\|Ga0075430_100175732	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300006904\|Ga0075424_100258958	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300006939\|Ga0081244_1536094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	760	Open in IMG/M
3300007258\|Ga0099793_10268812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	825	Open in IMG/M
3300007258\|Ga0099793_10448517	Not Available	638	Open in IMG/M
3300009089\|Ga0099828_11341434	Not Available	632	Open in IMG/M
3300009089\|Ga0099828_11951614	Not Available	514	Open in IMG/M
3300009094\|Ga0111539_10326479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1786	Open in IMG/M
3300009098\|Ga0105245_10470068	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300009100\|Ga0075418_11477001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	738	Open in IMG/M
3300009100\|Ga0075418_12357504	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium ADurb.Bin001	581	Open in IMG/M
3300009545\|Ga0105237_11670197	Not Available	644	Open in IMG/M
3300009803\|Ga0105065_1020917	Not Available	774	Open in IMG/M
3300009804\|Ga0105063_1010680	Not Available	972	Open in IMG/M
3300009810\|Ga0105088_1107946	Not Available	521	Open in IMG/M
3300009816\|Ga0105076_1004960	All Organisms → cellular organisms → Bacteria → Proteobacteria	2122	Open in IMG/M
3300009819\|Ga0105087_1108354	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009823\|Ga0105078_1057025	Not Available	530	Open in IMG/M
3300010029\|Ga0105074_1026402	Not Available	979	Open in IMG/M
3300010046\|Ga0126384_10455023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1094	Open in IMG/M
3300010084\|Ga0127461_1096257	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300010089\|Ga0127454_1112095	Not Available	655	Open in IMG/M
3300010115\|Ga0127495_1102209	Not Available	554	Open in IMG/M
3300010119\|Ga0127452_1157897	Not Available	537	Open in IMG/M
3300010132\|Ga0127455_1117856	Not Available	537	Open in IMG/M
3300010133\|Ga0127459_1073176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	642	Open in IMG/M
3300010142\|Ga0127483_1286353	Not Available	701	Open in IMG/M
3300010145\|Ga0126321_1404342	All Organisms → cellular organisms → Bacteria	3520	Open in IMG/M
3300010359\|Ga0126376_11327209	Not Available	741	Open in IMG/M
3300010359\|Ga0126376_12428073	Not Available	571	Open in IMG/M
3300010360\|Ga0126372_11124754	Not Available	805	Open in IMG/M
3300010362\|Ga0126377_10756540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1028	Open in IMG/M
3300010366\|Ga0126379_10117677	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300011269\|Ga0137392_10442002	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300012189\|Ga0137388_11587635	Not Available	590	Open in IMG/M
3300012198\|Ga0137364_10641436	Not Available	801	Open in IMG/M
3300012199\|Ga0137383_10508452	Not Available	882	Open in IMG/M
3300012201\|Ga0137365_10204553	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300012205\|Ga0137362_11732687	Not Available	512	Open in IMG/M
3300012210\|Ga0137378_10080603	All Organisms → cellular organisms → Bacteria → Proteobacteria	2968	Open in IMG/M
3300012351\|Ga0137386_10126040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1823	Open in IMG/M
3300012363\|Ga0137390_10302115	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300012363\|Ga0137390_10554817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1119	Open in IMG/M
3300012363\|Ga0137390_11568647	Not Available	597	Open in IMG/M
3300012382\|Ga0134038_1263309	Not Available	513	Open in IMG/M
3300012405\|Ga0134041_1055639	Not Available	617	Open in IMG/M
3300012922\|Ga0137394_11305936	Not Available	588	Open in IMG/M
3300012958\|Ga0164299_11460954	Not Available	531	Open in IMG/M
3300012989\|Ga0164305_11707479	Not Available	565	Open in IMG/M
3300015241\|Ga0137418_10121422	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300015372\|Ga0132256_103791372	Not Available	508	Open in IMG/M
3300016294\|Ga0182041_10360051	Not Available	1226	Open in IMG/M
3300016341\|Ga0182035_11967783	Not Available	531	Open in IMG/M
3300016422\|Ga0182039_10535192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300018056\|Ga0184623_10424557	Not Available	580	Open in IMG/M
3300018079\|Ga0184627_10385048	Not Available	731	Open in IMG/M
3300021307\|Ga0179585_1076564	Not Available	638	Open in IMG/M
3300025904\|Ga0207647_10641912	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300025913\|Ga0207695_10419599	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300026297\|Ga0209237_1070892	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300026547\|Ga0209156_10376921	Not Available	601	Open in IMG/M
3300027577\|Ga0209874_1044167	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300027577\|Ga0209874_1050706	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300027643\|Ga0209076_1010175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2394	Open in IMG/M
3300027846\|Ga0209180_10532008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	656	Open in IMG/M
3300027874\|Ga0209465_10200216	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300027907\|Ga0207428_10065463	All Organisms → cellular organisms → Bacteria	2867	Open in IMG/M
3300027909\|Ga0209382_10054473	All Organisms → cellular organisms → Bacteria	4758	Open in IMG/M
3300027961\|Ga0209853_1061805	Not Available	1012	Open in IMG/M
3300028536\|Ga0137415_10128370	All Organisms → cellular organisms → Bacteria	2379	Open in IMG/M
3300030574\|Ga0247648_1062440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica → Desulfobacula toluolica Tol2	746	Open in IMG/M
3300030608\|Ga0247651_10006140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema	1380	Open in IMG/M
3300030829\|Ga0308203_1014042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	968	Open in IMG/M
3300030829\|Ga0308203_1049185	Not Available	636	Open in IMG/M
3300030986\|Ga0308154_111013	Not Available	596	Open in IMG/M
3300030987\|Ga0308155_1029219	Not Available	545	Open in IMG/M
3300031058\|Ga0308189_10365313	Not Available	585	Open in IMG/M
3300031092\|Ga0308204_10306462	Not Available	533	Open in IMG/M
3300031099\|Ga0308181_1061065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	739	Open in IMG/M
3300031543\|Ga0318516_10664365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	593	Open in IMG/M
3300031719\|Ga0306917_11167765	Not Available	598	Open in IMG/M
3300031796\|Ga0318576_10451732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	607	Open in IMG/M
3300031892\|Ga0310893_10343348	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031910\|Ga0306923_11707355	Not Available	650	Open in IMG/M
3300031912\|Ga0306921_11085851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	898	Open in IMG/M
3300031944\|Ga0310884_10859516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	558	Open in IMG/M
3300031945\|Ga0310913_10405791	Not Available	967	Open in IMG/M
3300032013\|Ga0310906_10032355	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300032075\|Ga0310890_10249978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1247	Open in IMG/M
3300032091\|Ga0318577_10377108	Not Available	678	Open in IMG/M
3300032179\|Ga0310889_10659198	Not Available	544	Open in IMG/M
3300034661\|Ga0314782_093584	Not Available	670	Open in IMG/M
3300034664\|Ga0314786_027010	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300034667\|Ga0314792_220902	Not Available	541	Open in IMG/M
3300034668\|Ga0314793_029986	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300034675\|Ga0314800_014650	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300034678\|Ga0314803_061817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	670	Open in IMG/M
3300034680\|Ga0370541_002142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	1556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.22%
Host-Associated	Host-Associated	14.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.61%
Plants	Host-Associated → Plants	14.78%
Aquatic	Environmental → Aquatic	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%
Sediment	Environmental → Aquatic → Sediment	1.74%
Freshwater	Environmental → Aquatic → Freshwater	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.43%
Sand	Environmental → Terrestrial → Soil → Sand	8.70%
Loam	Environmental → Terrestrial → Soil → Loam	6.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.57%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.70%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908021	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010084	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010089	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010115	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030574	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034675	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BSRL3_00384910	2124908021	Switchgrass Rhizosphere	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL
JGI12053J15887_103079632	3300001661	Forest Soil	MDGMANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGIYATGGQSAPNPFVVTETEHGNPVCLPRGKVSRKASR*
Ga0063356_1010410411	3300004463	Arabidopsis Thaliana Rhizosphere	MANPGERLIHIVTENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKASRKASRRACGPGRMEEANAIL*
Ga0066395_100947902	3300004633	Tropical Forest Soil	MANPGERSINIVTENKPKVLPGLSQKGTVAGTRIPPLLVMDTNATGGQSAPNPFVVTETEHGNPVRLPQGKVSRKASR*
Ga0066683_103535052	3300005172	Soil	MANPGERSINIVKENKPKVLEGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0066685_104284111	3300005180	Soil	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0066675_102725942	3300005187	Soil	MANPGERSINIVNENKPKVLPGLSQKGTGAGTRIPPLLVMDTNATGGQSAPTPFVVTETEHGNPVRLPGGKANRKVSRQACGYGRLEEAKAILSWSG*
Ga0066388_1020054522	3300005332	Tropical Forest Soil	MANPGERSINIVTKNKPKVLKGLSQKGTVAGTRTLCFLVMGSNATGGQSAPTPFVVTKTEHGNPVRLPQGKVSRKASR*
Ga0066388_1051551522	3300005332	Tropical Forest Soil	RDGDGARMDGMANPGERSINIVTENKPKVLAGLSQNGTVVGTRSPRFLVMGSHATGGQSAPTPFVVTKAEHGNPVRLL*
Ga0070691_106970951	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MANPGERSINIVKENKPKVLEGLSQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLPQGKA
Ga0066707_106657021	3300005556	Soil	MANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0066905_1000440352	3300005713	Tropical Forest Soil	MANPGERSINIVTENKPKVLEGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP*
Ga0068861_1000497902	3300005719	Switchgrass Rhizosphere	MANPGERLINIVTENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRREEANAIL*
Ga0068861_1014201942	3300005719	Switchgrass Rhizosphere	MDGMANPGERSINIVIDNKPKVLAGLSQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLPQGKAN
Ga0066903_1042890101	3300005764	Tropical Forest Soil	MDGMANPGERSINIVTKNKPKVLKGLSQKGTVAGTRTLCFLVMGSNATGGQSAPTPFVVTKTEHGNPVRLPQGKVSRKASR*
Ga0075417_100161244	3300006049	Populus Rhizosphere	MDGRANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0075428_1005009862	3300006844	Populus Rhizosphere	MANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0075430_1001757322	3300006846	Populus Rhizosphere	MANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGK
Ga0075424_1002589582	3300006904	Populus Rhizosphere	MAPPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0081244_15360942	3300006939	Tropical Rainforest Soil	MANPGERSINIVRENKPKVLAGLGQKGTVAGTRILPFLVMGTHATGGQSAPNPFVVTATEHGNPVRLP*
Ga0099793_102688121	3300007258	Vadose Zone Soil	MANPGERSINIVIANKPKVLQGLSQKGTVAGTRISPFLVMGRNATGGQSAPTPFVVTETEHGNPVRLPQGKANRKAS*
Ga0099793_104485171	3300007258	Vadose Zone Soil	MANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGIYATGGQSAPNPFVVTETEHGNPVCLPRGKVSRKASR*
Ga0099828_113414341	3300009089	Vadose Zone Soil	MDGMANPGARWIHIVTENKPKVLAGLGHKGTGAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLPQGKASRKASRKACGKRRME
Ga0099828_119516141	3300009089	Vadose Zone Soil	MANPGERSINIVTKNKPKVLEGLSQKGTVAGTRTPRFLVMGSNATGGQSAPPPFVVTETEHGNPVR
Ga0111539_103264792	3300009094	Populus Rhizosphere	MANPGERSINIVKENKPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVIETEHGNPVRLPQGKASRKASR*
Ga0105245_104700681	3300009098	Miscanthus Rhizosphere	MANPGERSINIVKANKPKMLESLSQKGTVAGTRIPPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRREEANAIL*
Ga0075418_114770012	3300009100	Populus Rhizosphere	MANPGERLINIVKENKPKVLEGLGQKGTVAGPRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0075418_123575041	3300009100	Populus Rhizosphere	KPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVIETEHGNPVRLPQGKASRKASR*
Ga0105237_116701971	3300009545	Corn Rhizosphere	LINIVTENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0105065_10209171	3300009803	Groundwater Sand	MDGRANPGERLINIVTENKPKVLEGLRQKGKVAGTRILPFLVMGINATGGQSAPTPFVVTETEHGNPVRFPSGKASRKASR*
Ga0105063_10106802	3300009804	Groundwater Sand	LINIVTENKPKVLEGLGQKGTIAGTRTFPFLVMGSNATGGQSAPTPFIVTETEHGNPVRLP*
Ga0105088_11079461	3300009810	Groundwater Sand	MANPGERSINIVKANKPKVLAGLGQKGTGAGTRTFPFLVMGNNATGGQSAPTPFVVTETEHGNPVCLPQGKASRKASRKACG
Ga0105076_10049602	3300009816	Groundwater Sand	MDGRANPGERSINIVNENKPKVLEGLSQKGTVVGTRIPPFLVMGIPRYRWRERAYPIVVPETEHGNPVRLPRGKASRKASRKACGHRRMEEAKATL*
Ga0105087_11083541	3300009819	Groundwater Sand	INIVTDNKPKVLEGLSHKGKVAGTRILPFLVMGLNATGGQSAPTPFVVTETEHGNPVRLPQGKANRKASR*
Ga0105078_10570251	3300009823	Groundwater Sand	MDGRANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGNNATGGQSAPTPFVVTEAEHGNPVRFPLRGKAS
Ga0105074_10264022	3300010029	Groundwater Sand	MDGRANPGERSINIVNENKPKVLEGLSQKGTVVGTRIPPFLVMGIPRYRWRERAYPIVVPETEHGNPVRLP*
Ga0126384_104550231	3300010046	Tropical Forest Soil	GQRSINIVTENKPKVLEGLSQNGTVAGTRIPRFLVMGNNVTGGQSAPTPFVVTKAEHGNPVRLL*
Ga0127461_10962571	3300010084	Grasslands Soil	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGTVSREASRRACGQRRMEEANAIL*
Ga0127454_11120952	3300010089	Grasslands Soil	MANPGERSINIVTENKPKMLLGLSQKGTVAGTRTPPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGQRRMEEANAIL*
Ga0127495_11022091	3300010115	Grasslands Soil	MDGMANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGTVSRKASRRACGQR
Ga0127452_11578972	3300010119	Grasslands Soil	MDGRANPGERSINIDTENKPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP*
Ga0127455_11178561	3300010132	Grasslands Soil	ANPGERSINIVTENKPKVLPGLSQKGTGAGTRIPPLLVMDTNATGGQNAPTPFVVTETEHGNPVRLPGGKANRKVSRQACGYGRLEEAKAILSWSG*
Ga0127459_10731761	3300010133	Grasslands Soil	MANPGERSINIVKENKPKVLEGLSQNGIVAGTRTPRFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0127483_12863531	3300010142	Grasslands Soil	LINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASR*
Ga0126321_14043422	3300010145	Soil	MANPGERSINIVTENKPKVLEGLGQKGTVAGTRISPLLVMGNNATGGQSAPNPFLVTATEHGNPVCLP*
Ga0126376_113272092	3300010359	Tropical Forest Soil	MANPGERSINIVTANKPKVLPGLSQKGTVAGTRIPPLLVMDTNATGGQSAPTPFVVTETEHGNPVRLPQGKVSRKASR*
Ga0126376_124280732	3300010359	Tropical Forest Soil	MDGMANPGERSINIVTENKPKVLEGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP*
Ga0126372_111247542	3300010360	Tropical Forest Soil	GMANPGERSINIVTENKPKVLEGLGQKGTVAGTRIFPFLVMGNNATGRQSVPTPFVVTETEHGNPVRLPQGKANRNS*
Ga0126377_107565401	3300010362	Tropical Forest Soil	MDGMANPGERSINIVRENKPKVLAGLGQKGTVAGTRILPFLVMGTHATGGQSAPNPFVVTATEHGNPVRLP*
Ga0126379_101176772	3300010366	Tropical Forest Soil	MDGRANPGERSINIVTENKPKVLEGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP*
Ga0137392_104420021	3300011269	Vadose Zone Soil	MDGMANPGERLINIVTENKPKVLEGLGQKGTVAGTRTLGFLVMGIHATGGQSAPHPFVVTEAEHGNPVRSPLRGKVSRKASRRACGHRRMEEANAIL*
Ga0137388_115876351	3300012189	Vadose Zone Soil	LINIVTANKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGQRRMEEANAIL*
Ga0137364_106414362	3300012198	Vadose Zone Soil	MANPGERSINIVKENKPKVLPGLSQKGTGAGTRIPPLLVMDTNATGGQSAPNPFVVTETEHGNPVRLP
Ga0137383_105084521	3300012199	Vadose Zone Soil	MANPGERSINIVTENKPKVLAGLSQKGTVAGTRTLCFLVMGIDATGGQSAPTPFVVTETEHGNPVRLPQGK
Ga0137365_102045532	3300012201	Vadose Zone Soil	MANPGERSVNIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGIYATGGQSAPTPFVVTETEHGNPVRLLLGKASRKVSR*
Ga0137362_117326871	3300012205	Vadose Zone Soil	NIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGIYATGGQSAPNPFVVTETEHGNPVCLPRGKVSRKASR*
Ga0137378_100806032	3300012210	Vadose Zone Soil	MANPGERSINIVTENKPKVLAGLSQKGTVAGTRTLCFLVMGIDATGGQSAPTPFVVTETEHGNPVRLPQGKVSRKASR*
Ga0137386_101260401	3300012351	Vadose Zone Soil	MANPGERSINIVTENKPKVLAGLSQKGTVAGTRTLCFFVMGIDATGGQSAPTPFVVTETEHGNPVRLPQGKVSRKASR*
Ga0137390_103021152	3300012363	Vadose Zone Soil	MANPGERLINIVTANKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGQRRMEEANAIL*
Ga0137390_105548171	3300012363	Vadose Zone Soil	MANPGERSINIVNENKPKVLAGLSQKGTVVGTRTPPFLVMGNNATGGQSAPTPFVVTKTEHGNPVRLPQGNVSRKASR*
Ga0137390_115686471	3300012363	Vadose Zone Soil	SINIVNENKPKVLAGLSQNGTGAGTRISPFLVMGITRYRWIERAYPIVVTETEHGHAVRLP*
Ga0134038_12633091	3300012382	Grasslands Soil	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRSLPFLVMGDNATGGQSAPTPFVVTETEHGNPVRLPGGKANRKVSRQACGYGRME
Ga0134041_10556392	3300012405	Grasslands Soil	LINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTETEHGNPRTPPRRESEP*
Ga0137394_113059361	3300012922	Vadose Zone Soil	MANPGERSINIVIANKPKVLQGLSQKGTVAGTRIPPFLVMGRNATGGQSAPTPFVVTETEHGNPVRLPQGKANRKAS*
Ga0164299_114609541	3300012958	Soil	MANPGERLLNIVKENKPKVLEGLGQKGTVAGTRIFPCLVMGSNATGGQSAPTPFVVTETEHGNPVRLP*
Ga0164305_117074792	3300012989	Soil	MANPGERSINIVTENKPKVLEGLGQKGTVAGTRILPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP*
Ga0137418_101214221	3300015241	Vadose Zone Soil	MANPGERSINIVKENKPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLPQGKASRKASR*
Ga0132256_1037913721	3300015372	Arabidopsis Rhizosphere	MDGRANPGERSINIVTENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHGRMEEAKATL*
Ga0182041_103600512	3300016294	Soil	QTGITTVRGGYICQPRDGDGARMDGRANPGERSRNIVTKNTPQVLPGLSQKGTGAGARTLCFLVMGIDAPGGQSAPTPCVVTETEHGNPVRLP
Ga0182035_119677831	3300016341	Soil	MDGRANPGERSLNIVTENKPKVLAGLSQNGTVAGTRSPRFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0182039_105351921	3300016422	Soil	MANPGERSINIVTENKPKVLEGLSQKGTVAGTRIPQLLVMDTHATGGQSAPNPFVVTETEHGNPVCLPSGKASRKASR
Ga0184623_104245571	3300018056	Groundwater Sediment	MDGRANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGSNATGGQSAPTPFAVTETEHGNPVRLPQGKASRKASR
Ga0184627_103850482	3300018079	Groundwater Sediment	MGGTANPGERSIHIVTDTKPKVLEGLSPKGTVVGTRIPPFLVMDSNATGGQRAPTPRIVPETEHGNPVRLPRGKARRKASRE
Ga0179585_10765641	3300021307	Vadose Zone Soil	MANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGIYATGGQSAPNPFVVTETEHGNPVCLPRGKVSRKASR
Ga0207647_106419121	3300025904	Corn Rhizosphere	RANKPKVLEGLSQKGTVAGTRIPPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0207695_104195992	3300025913	Corn Rhizosphere	MANPGERLINIVTENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRREEANAIL
Ga0209237_10708921	3300026297	Grasslands Soil	MANPGERSINIVTENKPKVLAGLSQKGTVAGTRTPRFLVMGSNATGGQSASNPFVVTETEHGNPVCLPRGNVSRKASR
Ga0209156_103769212	3300026547	Soil	MANPGERSINIVNENKPKVLPGLSQKGTGAGTRIPPLLVMDTNATGGQSAPTPFVVTETEHGNPVRLPGGKANRKVSRQACGYGRLEEAKAILSWSG
Ga0209874_10441672	3300027577	Groundwater Sand	INIVKANKPKVLAGLGQKGTGAGTRTFPFLVMGNNATGGQSAPTPFVVTETEHGNPVCLPQGKASRKASRKACG
Ga0209874_10507061	3300027577	Groundwater Sand	MDGRANPGERSINIVKENKPKVLEGLGQKGIVVGTRTFPFLVMGSNTTGGQSAPTPFIVTETEHGNPVRLPRGKASRKA
Ga0209076_10101751	3300027643	Vadose Zone Soil	MANPGERSINIVKENKPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLPQGKASRKASR
Ga0209180_105320081	3300027846	Vadose Zone Soil	LINIVKANKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASR
Ga0209465_102002161	3300027874	Tropical Forest Soil	QTGITTVRGRCICQHRDGDGARMDGRANPGERSINIVTENKPKVLEGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0207428_100654631	3300027907	Populus Rhizosphere	MANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL
Ga0209382_100544733	3300027909	Populus Rhizosphere	MDGRANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL
Ga0209853_10618053	3300027961	Groundwater Sand	MDGRANPGERSINIVNENKPKVLEGLSQKGTVVGTRIPPFLVMGIPRYRWRERAYPIVVTETEHGNPVRLPRGKARRKACR
Ga0137415_101283706	3300028536	Vadose Zone Soil	MDGMANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGIYATGGQSAPNPFVVTETEHGNPVCLPRGKVSRKASR
Ga0247648_10624402	3300030574	Soil	MANPGERLINIVKANKPKVLEGLGQKGTVAGTRIFPFLVMGTHATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGHRRMEEANAIL
Ga0247651_100061401	3300030608	Soil	MANPGERLINIVTDNKPKVLEGLSQKGTVAGTRTPLFLVMDTNATGGQSAPTPFVVTETEHGNPVRLPQGKVSRKASRQACGHGRMEEANAIL
Ga0308203_10140421	3300030829	Soil	MDGMANPGERSINIVIANKPKVLQGLSQKGTVAGTRISPFLVMGRNATGGQSAPTPFVVTETEHGNPVRLPQGKANRKAS
Ga0308203_10491851	3300030829	Soil	MDGRANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGSNATGGQSAPPPFVVTEAEHGNPVRFPLRGKVSRKASRRV
Ga0308154_1110132	3300030986	Soil	MANPGERSINIVIANKPKVLQGLSQKGTVAGTRISPFLVMGRNATGGQSAPTPFVVTETEHGNPVRLP
Ga0308155_10292191	3300030987	Soil	LINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGNNATGGQSAPTPFVVTETEHGNPVRL
Ga0308189_103653131	3300031058	Soil	MDGRANPGERSINIVTENKPKVLEGLSQKGIVAGTRTPRFLVMGSNATGGQSAPTPFAVTETEHGNSVRLPQGKASRKASR
Ga0308204_103064622	3300031092	Soil	MDGRANPGERSINIVTENKPKVLEGLSQKGTVAGTRTPRFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKASRKASRRACGPRRMEEAN
Ga0308181_10610652	3300031099	Soil	MANPGERSINIVIANKPKVLQGLSQKGTVAGTRISPFLVMGRNATGGQSAPTPFVVTETEHGNPVRLPQGKANRKAS
Ga0318516_106643652	3300031543	Soil	DGDGARMDGMANPGERSINIVTENKPKVLAGLSQNGTVAGTRSPRFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0306917_111677651	3300031719	Soil	MDGRANLGERSINIVTENKPKVLAGLSQNGTVAGTRSPRFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0318576_104517321	3300031796	Soil	ARMDGRANLGERSINIVTENKPKVLAGLSQNGTVAGTRSPRFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0310893_103433482	3300031892	Soil	GMANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL
Ga0306923_117073551	3300031910	Soil	TDNKPKVLPGLSQKGTVAGTRIPPLLVMDTHATGGQSAPNPFVVTETEHGNPVRLPQGKVSRKASR
Ga0306921_110858512	3300031912	Soil	MANLGERSINIVTENKPKVLAGLSQNGTVAGTRSPRFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0310884_108595162	3300031944	Soil	GERSINIVKENKPKVLAGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0310913_104057911	3300031945	Soil	MANPGERSINIVTDNKPKVLTGLGQKGTVAGTRIPPLLVMDTNATGGQSAPTPFVVTETEHGNPVRLPGVKANRKVSRQ
Ga0310906_100323551	3300032013	Soil	MANPGERSINIVKENKPKVLAGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL
Ga0310890_102499782	3300032075	Soil	MANPGERSINIVTENKPKVLAGLGQKGTVAGTRTFPFLVMGSNATGGQSAPTPFVVIETEHGNPVRLPQGKASRKASR
Ga0318577_103771081	3300032091	Soil	MDGMANPGERSINIVTENKPKVLPGLSQKGTVAGTRIPQLLVMDTHATGGQSAPNPFVVTETEHGNPVRLPQGKASRKASR
Ga0310889_106591982	3300032179	Soil	MDGMANPGERSINIVKENKPKVLAGLGQKGTVVGTRTFPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0314782_093584_222_437	3300034661	Soil	MDGMANPGERSINIVKENKPKVLAGLGQKGTVVGTRTVPFLVMGSNATGGQSAPTPFVVTETEHGNPVRLP
Ga0314786_027010_663_956	3300034664	Soil	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL
Ga0314792_220902_269_541	3300034667	Soil	MANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEAN
Ga0314793_029986_277_570	3300034668	Soil	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRILPFLVMGNNATGGQSAPTPFVITEAEHGNPVRCPLRGKVSRKASRRACGHRRMEEANAIL
Ga0314800_014650_661_897	3300034675	Soil	MANLGERSINIVRENKPKVLEGLSQKGTVAGTRILPFLVMGSNATGGQSAPTPFVITEAEHGNPVRYPLRGKVSRKASR
Ga0314803_061817_195_488	3300034678	Soil	MDGMANPGERSINIVKENKPKVLAGLGQKGTVVDTRTFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGQRRMEEANAIL
Ga0370541_002142_183_476	3300034680	Soil	MDGMANPGERLINIVKENKPKVLEGLGQKGTVAGTRIFPFLVMGSNATGGQSAPTPFVVTEAEHGNPVRFPLRGKVSRKASRRACGQRRMEEANAIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079761

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences