Metagenome / Metatranscriptome Family F079747

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079747
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	48 residues
Representative Sequence	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRP
Number of Associated Samples	100
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.565 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.435 % of family members)
Environment Ontology (ENVO)	Unclassified (31.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.304 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.33% β-sheet: 34.67% Coil/Unstructured: 56.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF07690	MFS_1	13.91
PF02511	Thy1	7.83
PF00248	Aldo_ket_red	6.09
PF00043	GST_C	4.35
PF14497	GST_C_3	4.35
PF02515	CoA_transf_3	4.35
PF02798	GST_N	2.61
PF01243	Putative_PNPOx	1.74
PF12697	Abhydrolase_6	1.74
PF09084	NMT1	1.74
PF13776	DUF4172	1.74
PF00496	SBP_bac_5	1.74
PF00717	Peptidase_S24	0.87
PF09587	PGA_cap	0.87
PF13417	GST_N_3	0.87
PF01381	HTH_3	0.87
PF01715	IPPT	0.87
PF02900	LigB	0.87
PF02771	Acyl-CoA_dh_N	0.87
PF07859	Abhydrolase_3	0.87
PF02423	OCD_Mu_crystall	0.87
PF08239	SH3_3	0.87
PF06941	NT5C	0.87
PF04255	DUF433	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	7.83
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	4.35
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	4.35
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	4.35
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.74
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.74
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	0.87
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.87
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.87
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.87
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.87
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.57 %
Unclassified	root	N/A	9.57 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.35 %
Unclassified	root	N/A	9.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.61 %
Unclassified	root	N/A	9.57 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.61 %
Unclassified	root	N/A	9.57 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	21.74 %
Unclassified	root	N/A	9.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.13 %
Unclassified	root	N/A	9.57 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Ustilaginomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.13 %
Unclassified	root	N/A	9.57 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Exobasidiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina → Exobasidiomycetes	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.13 %
Unclassified	root	N/A	9.57 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Microstromatales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina → Exobasidiomycetes → Microstromatales	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.13 %
Unclassified	root	N/A	9.57 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Microstromatales incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina → Exobasidiomycetes → Microstromatales → Microstromatales incertae sedis	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.13 %
Unclassified	root	N/A	9.57 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Pseudomicrostroma	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina → Exobasidiomycetes → Microstromatales → Microstromatales incertae sedis → Pseudomicrostroma	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	19.13 %
Unclassified	root	N/A	9.57 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.74 %
Pseudomicrostroma glucosiphilum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina → Exobasidiomycetes → Microstromatales → Microstromatales incertae sedis → Pseudomicrostroma → Pseudomicrostroma glucosiphilum	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8793110	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
2228664021\|ICCgaii200_c0543117	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300001989\|JGI24739J22299_10183062	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300003997\|Ga0055466_10254316	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	530	Open in IMG/M
3300004156\|Ga0062589_101449163	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004266\|Ga0055457_10176207	Not Available	619	Open in IMG/M
3300004281\|Ga0066397_10112315	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300004480\|Ga0062592_101813015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300004480\|Ga0062592_102015298	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005218\|Ga0068996_10048932	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005294\|Ga0065705_10184925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1547	Open in IMG/M
3300005294\|Ga0065705_11019606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300005295\|Ga0065707_10193162	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300005332\|Ga0066388_103761527	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005332\|Ga0066388_103872339	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005332\|Ga0066388_104598878	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005332\|Ga0066388_108318271	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Ustilaginomycotina → Exobasidiomycetes → Microstromatales → Microstromatales incertae sedis → Pseudomicrostroma → Pseudomicrostroma glucosiphilum	517	Open in IMG/M
3300005440\|Ga0070705_100624603	Not Available	837	Open in IMG/M
3300005441\|Ga0070700_100032935	All Organisms → cellular organisms → Bacteria	3119	Open in IMG/M
3300005545\|Ga0070695_100072826	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300005615\|Ga0070702_100411640	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005764\|Ga0066903_105985536	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006845\|Ga0075421_100470864	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300006845\|Ga0075421_100910687	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300006845\|Ga0075421_102279715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300006846\|Ga0075430_100811634	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006852\|Ga0075433_10362532	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300006918\|Ga0079216_10662084	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300007076\|Ga0075435_100076803	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300009012\|Ga0066710_104010998	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009053\|Ga0105095_10311122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
3300009087\|Ga0105107_10100827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2034	Open in IMG/M
3300009100\|Ga0075418_11550419	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300009100\|Ga0075418_13060492	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300009156\|Ga0111538_11572204	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300009156\|Ga0111538_14034685	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300009162\|Ga0075423_10294232	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300009166\|Ga0105100_10898701	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009176\|Ga0105242_10035002	All Organisms → cellular organisms → Bacteria	4027	Open in IMG/M
3300009285\|Ga0103680_10626731	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300009553\|Ga0105249_11484413	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010043\|Ga0126380_11742816	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010046\|Ga0126384_10592964	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300010047\|Ga0126382_10231741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1339	Open in IMG/M
3300010047\|Ga0126382_10613581	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300010304\|Ga0134088_10076353	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300010359\|Ga0126376_11197237	Not Available	774	Open in IMG/M
3300010359\|Ga0126376_12609780	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010359\|Ga0126376_12628163	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010360\|Ga0126372_13024478	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010362\|Ga0126377_10640010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1111	Open in IMG/M
3300010399\|Ga0134127_10068508	All Organisms → cellular organisms → Bacteria	3005	Open in IMG/M
3300011429\|Ga0137455_1108536	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300011443\|Ga0137457_1128701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M
3300012034\|Ga0137453_1118862	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012228\|Ga0137459_1246246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300012884\|Ga0157300_1045377	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012948\|Ga0126375_12052343	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300014270\|Ga0075325_1021239	Not Available	1222	Open in IMG/M
3300014745\|Ga0157377_11739584	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300014877\|Ga0180074_1083346	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300015170\|Ga0120098_1016460	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300015201\|Ga0173478_10756350	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300015258\|Ga0180093_1072826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300015374\|Ga0132255_102349944	Not Available	813	Open in IMG/M
3300017936\|Ga0187821_10307034	Not Available	632	Open in IMG/M
3300018054\|Ga0184621_10259773	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018083\|Ga0184628_10228258	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300018084\|Ga0184629_10378513	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300018422\|Ga0190265_10295787	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300019263\|Ga0184647_1188071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300021082\|Ga0210380_10299154	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300025002\|Ga0209001_1042947	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300025155\|Ga0209320_10099435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1334	Open in IMG/M
3300025159\|Ga0209619_10444917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300025159\|Ga0209619_10463422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300025165\|Ga0209108_10351995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300025173\|Ga0209824_10291041	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300025313\|Ga0209431_10972700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300025925\|Ga0207650_10557525	Not Available	961	Open in IMG/M
3300025961\|Ga0207712_10638377	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300026014\|Ga0208776_1001284	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2188	Open in IMG/M
3300026023\|Ga0207677_12116775	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026062\|Ga0208654_1005633	All Organisms → cellular organisms → Bacteria → Proteobacteria	1609	Open in IMG/M
3300026067\|Ga0207678_10111506	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300026075\|Ga0207708_10020150	All Organisms → cellular organisms → Bacteria	5029	Open in IMG/M
3300026095\|Ga0207676_10714626	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300026095\|Ga0207676_11068573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	797	Open in IMG/M
3300026116\|Ga0207674_10293026	Not Available	1576	Open in IMG/M
3300026118\|Ga0207675_102663286	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300027360\|Ga0209969_1054048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	631	Open in IMG/M
3300027639\|Ga0209387_1107672	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300027647\|Ga0214468_1187514	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300027787\|Ga0209074_10083556	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300027909\|Ga0209382_10941865	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300028379\|Ga0268266_11016540	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1178052	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031562\|Ga0310886_10459719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M
3300031716\|Ga0310813_10456058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1110	Open in IMG/M
3300031716\|Ga0310813_10937333	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031858\|Ga0310892_10359952	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300031901\|Ga0307406_10391105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1099	Open in IMG/M
3300031903\|Ga0307407_11498525	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031941\|Ga0310912_11127121	Not Available	599	Open in IMG/M
3300032144\|Ga0315910_11164833	Not Available	602	Open in IMG/M
3300032157\|Ga0315912_10043743	All Organisms → cellular organisms → Bacteria	3557	Open in IMG/M
3300032180\|Ga0307471_104349193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300032261\|Ga0306920_101185744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1104	Open in IMG/M
3300032421\|Ga0310812_10141355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1017	Open in IMG/M
3300033289\|Ga0310914_10806837	Not Available	837	Open in IMG/M
3300033417\|Ga0214471_11015381	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300033480\|Ga0316620_12355394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	529	Open in IMG/M
3300033814\|Ga0364930_0264043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300034090\|Ga0326723_0612190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	505	Open in IMG/M
3300034164\|Ga0364940_0022615	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.78%
Host-Associated	Host-Associated	25.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.39%
Plants	Host-Associated → Plants	25.22%
Aquatic	Environmental → Aquatic	17.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.26%
Sediment	Environmental → Aquatic → Sediment	7.83%
Freshwater	Environmental → Aquatic → Freshwater	6.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.96%
Marine	Environmental → Aquatic → Marine	2.61%
Floodplain	Environmental → Terrestrial → Floodplain	1.74%
Peat	Environmental → Terrestrial → Peat	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.65%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%
Sand	Environmental → Terrestrial → Soil → Sand	0.87%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.74%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.87%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.87%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.87%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.87%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.87%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004266	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025002	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 2 (SPAdes)	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025173	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03032140	2088090015	Soil	MEWKEALPLLQENHTGVATSXXXXTVVSTAVLDGKVGFASRPRTIKLKNIQRTGRATLTVIKLDNR
ICCgaii200_05431171	2228664021	Soil	MEWQEALPLLRENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASR
JGI24739J22299_101830621	3300001989	Corn Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDXLGFASRPRTVKLKNIQRTGR
Ga0055466_102543161	3300003997	Natural And Restored Wetlands	MDWKEALPLLQENHTGVAISVTPKGRAQSTVVSTAVLDGKVGFASRPRTVKLKNIDR
Ga0062589_1014491631	3300004156	Soil	MEWQEALPLLRENHTGVAISVTPKGRAQSTIVSTAVLDGKLG
Ga0055457_101762071	3300004266	Natural And Restored Wetlands	MEWKEALPLLQENHTGVAATVSSKGRAQSTIVSTAVLDGKVGVATRPRTVK
Ga0066397_101123152	3300004281	Tropical Forest Soil	MEWKEALPLLQDNHTGIAISVTPKGRAQSTVVSTALLDGKVGFAS
Ga0062592_1018130152	3300004480	Soil	MNWQEALPLLQGNHTGVASTITAKGRVQSTIVSTAVLDGKVGVAARPRTVKEKNIGRTGR
Ga0062592_1020152982	3300004480	Soil	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFAS
Ga0068996_100489321	3300005218	Natural And Restored Wetlands	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKVGFASRPRTVKLKNIE
Ga0065705_101849252	3300005294	Switchgrass Rhizosphere	MEWKEALPLLQENHSAVAISVTPKGRAQATVVSTALLDGKLGFASRP
Ga0065705_110196062	3300005294	Switchgrass Rhizosphere	MNWQEALPLLQGNHTGVASTITAKGRVQSTIVSTAVLDGKVGVA
Ga0065707_101931622	3300005295	Switchgrass Rhizosphere	MEWKKALPLLQENHSAVAISVTPKGRAQATVVSTALLDGKLGFASRPHTVKVKNIQRTGR
Ga0066388_1037615273	3300005332	Tropical Forest Soil	MEWKEALPLLQDNHTGVAISVTPKGHAHSTIVSTAVLDGKVGFASRSRTVKLKNIQRT
Ga0066388_1038723391	3300005332	Tropical Forest Soil	MEWKEALPLLQDNHTGVAISVTPKGRAQSTVVSTALLDGKLAFASRPHTVKVKNIQK
Ga0066388_1045988781	3300005332	Tropical Forest Soil	MEWKEALPLLQNNHTGVAISVTPKGRAQSTVVSTALLDGKVGFASRSHTVKL
Ga0066388_1083182711	3300005332	Tropical Forest Soil	MEWKEALPLLRANHTGIAISITAKGHAQSTVVSTAVLDDKLGFASRPRTVKLKNIQ
Ga0070705_1006246031	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEWKEVLPLLRANHTGIAISITAKGHAQSTVVSTAVLDDKLG
Ga0070700_1000329354	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPMGYAQSTIVSTALLDDKLGF
Ga0070695_1000728263	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKL
Ga0070702_1004116401	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFASRPRTVKL
Ga0066903_1059855361	3300005764	Tropical Forest Soil	MEWKEALPLLQNNHTGVAISVTPKGRAQSTVVSTALLDGKVGFASRS
Ga0075421_1004708641	3300006845	Populus Rhizosphere	MEWKKALPLLQENHSAVAISVTPKGRAQATVVSTALLDGKLGFASRP
Ga0075421_1009106871	3300006845	Populus Rhizosphere	MEWKEALPLLQENHTGVAISITPKGRAQSTIVSTAVLDGKLGFAS
Ga0075421_1022797152	3300006845	Populus Rhizosphere	MEWKEAFPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRPRTVK
Ga0075430_1008116342	3300006846	Populus Rhizosphere	MEWKEALPLLRENHAGVAISVTPNGHAQSTVVSTAVLDDKLGFAS
Ga0075433_103625321	3300006852	Populus Rhizosphere	MEWKEALPLLQENHSGVAISITARGHAQSTVVSTAVLDDKLGFASRPR
Ga0079216_106620842	3300006918	Agricultural Soil	MEWKEALPLLQENHTGVAISVMPNGRAQSTVVSTAVLDGKVGFASRGWTVNIKNIQRTGR
Ga0075435_1000768034	3300007076	Populus Rhizosphere	MEWKEALPLLRENHCGVAISVTPRGHAQSTVVSTAVLDDKLGFASRPRTVKL
Ga0066710_1040109981	3300009012	Grasslands Soil	MEWKEALPLLQGNHTGVAIAVTPMGRAQATDVSTAVLDGKVGFASRGYTVK
Ga0105095_103111222	3300009053	Freshwater Sediment	MDWKQALPLLQDNHTGVAVSVTPKGRAQATVVSTAVLDGK
Ga0105107_101008275	3300009087	Freshwater Sediment	MEWKEALPLLQENHTGVATSVTPNGRAQSTIVSTAVLDGKVGFASRPRTVKLKNI
Ga0075418_115504192	3300009100	Populus Rhizosphere	MEWKEALPLLRENHAGVAISVTPKGHAQSTVVSTAVLDDKLGFASRPR
Ga0075418_130604921	3300009100	Populus Rhizosphere	MEWQEALPLLRENHTGVAISVTPKGRAQSTIVSTAVLDGKLGF
Ga0111538_115722042	3300009156	Populus Rhizosphere	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRPR
Ga0111538_140346852	3300009156	Populus Rhizosphere	MEWKEALPLLQENHTGVAISVTPKGCAQSTVVSTAVLDGKVGFASRPHTVKVKNIQRTG
Ga0075423_102942321	3300009162	Populus Rhizosphere	MEWKEALPLLRENHCGVAISVTPRGHAQSTVVSTAVL
Ga0105100_108987011	3300009166	Freshwater Sediment	MEWKEALPLLQKNHTGVAVSVTPKGRAQATIVSTAVLDGKVGVATRPLTVKAKNIE
Ga0105242_100350025	3300009176	Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPMGYAQSTIVSTALLDDKLG
Ga0103680_106267311	3300009285	Groundwater	MEWNKALPLLQESHTGVAVTITAKGRAQSTIVSTAVLDGKLGFASRRH
Ga0105249_114844132	3300009553	Switchgrass Rhizosphere	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRPRTVKVKNIQ
Ga0126380_117428161	3300010043	Tropical Forest Soil	MEWKEALPLLQNNHTGVAISVTPKGRAQSTVVSTALL
Ga0126384_105929642	3300010046	Tropical Forest Soil	MEWKEALPLLQNNHTGVAISVTPKGHAQSTVVSTALLDGKLAFA
Ga0126382_102317413	3300010047	Tropical Forest Soil	MEWKEALPLLQDNHTGIAISVTPKGRAQSTVVSTALLDGKVGFASRS
Ga0126382_106135811	3300010047	Tropical Forest Soil	MEWKEALPLLQNNHTGVAISVTPKGRAQSTVVSTALLDGKVGFASRSH
Ga0134088_100763531	3300010304	Grasslands Soil	MEWKEALPLLQGNHTGVAISVTPKGRAQATVVSTA
Ga0126376_111972372	3300010359	Tropical Forest Soil	MEWKEALPLLQDNHTGVAISVTPKGRAQSTVVSTALLDGKLAFASRPHTVKVKNIQ
Ga0126376_126097801	3300010359	Tropical Forest Soil	MEWKEAFPLLQDNHTGVAISVTPKGHAHSTVVSTAVLDGKVGFASRSHTV
Ga0126376_126281631	3300010359	Tropical Forest Soil	MEWKEALPLLQANHTGVAISVTPKGRAQSTIVSTAVLEGKV
Ga0126372_130244781	3300010360	Tropical Forest Soil	MEWKEAFPLLQDNHTGVAISVTPEGRAQSTVVSTALLDGKVGFASRSHTVKLKNIQ
Ga0126377_106400101	3300010362	Tropical Forest Soil	MEWKEALPLLQNNHTGVAISVTPKGRAQSTVVSTALLDGKVGFASRSHTVK
Ga0134127_100685081	3300010399	Terrestrial Soil	MDWKEALPLLQENHTGVAISVTPKGRAQATIVSTAVLDGKVGFASRDYTVKVKNIQRTGR
Ga0137455_11085363	3300011429	Soil	MDWKEVLPLLQDNHTGVAISVTPKGRAQSTIVSTAVLD
Ga0137457_11287011	3300011443	Soil	MEWKEALPLLQENHTGVAATVTAKGRAQATIVSTA
Ga0137453_11188621	3300012034	Soil	MEWKEALPLLQENHTGVAISVTSKGRAQSTIISTAVLDDKLGFASRGYTVKV
Ga0137459_12462461	3300012228	Soil	MEWKEALPLLQENHTGVAISVTPKGRAQATVVSTAVLDGKVGFASRG
Ga0157300_10453772	3300012884	Soil	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFASRPRTVKLKNIQ
Ga0126375_120523432	3300012948	Tropical Forest Soil	MEWKEALPLLQDNHTGVAISVTPKGHAQSTVVSTAV
Ga0075325_10212393	3300014270	Natural And Restored Wetlands	MDWKEALPLLQNNHTGVAVSVTPQGRAHSTIVSTAVL
Ga0157377_117395841	3300014745	Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTAL
Ga0180074_10833461	3300014877	Soil	MEWKEALPLLQENHTGVAISVTPKGRAQSTVVSTAVLD
Ga0120098_10164602	3300015170	Fossill	MEWKEALPLLQENHTGVAISVTPKGRAQATVVSTALLDGKLGFASRGYTVKVKNI
Ga0173478_107563501	3300015201	Soil	MEWKEALPLLQENHTGVATSITRDGRAQSTVVSTAV
Ga0180093_10728262	3300015258	Soil	MEWKEALPLLQGNHTGVAASVTPKGRAQATIVSTALL
Ga0132255_1023499442	3300015374	Arabidopsis Rhizosphere	MEWKAALPLLRENHTGVAISVTPKGYAQSTIVSTALLDDKLGFASRPRTV
Ga0187821_103070341	3300017936	Freshwater Sediment	MEWKAALPLLRENHTGVAISVTPKGHAQSTIVSTALLDDK
Ga0184621_102597732	3300018054	Groundwater Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKVGFASRPRTVKLKNIQR
Ga0184628_102282582	3300018083	Groundwater Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRPRTVKVKNIQWTGRATIT
Ga0184629_103785131	3300018084	Groundwater Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTVVSTAVLDGKLGFASRGYTVKVKNI
Ga0190265_102957872	3300018422	Soil	MEWKEALPLLQENHTGVATSVTANGRAQSTVVSTAVLDDKVGFASRPR
Ga0184647_11880711	3300019263	Groundwater Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRP
Ga0210380_102991542	3300021082	Groundwater Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDG
Ga0209001_10429472	3300025002	Soil	MEWKEALPLLQENHTGVAISVTPKGRAQATVVSTAVLDGKVGFASRGYTVKVKN
Ga0209320_100994351	3300025155	Soil	MEWKEALPLLQENHTGVAISVTPRGRAQATVVSTAV
Ga0209619_104449172	3300025159	Soil	MEWKEALPLLQENHTGVAISVTPKGRAQSTVVSTAVLDGKLGFASRGYTAKV
Ga0209619_104634221	3300025159	Soil	MEWSEALPLLQENHTGVAISVTPKGRAQATVVSTAVLDGKVGFASR
Ga0209108_103519951	3300025165	Soil	MEWSEALPLLQENHTGVAISVTPKGRAQATVVSTAVLDGKVGF
Ga0209824_102910411	3300025173	Wastewater	MEWKEALPLLQKNHTGVAISVTPKGRAQATVVSTAVLDGKVGFASRGY
Ga0209431_109727002	3300025313	Soil	MEWKEALPLLQENHTGVAISVTSKGRAQATVVSTAVLDGKVGFASRGYTVKVKNI
Ga0207650_105575251	3300025925	Switchgrass Rhizosphere	MEWKEVLPLLRANHTGIAISITAKGHAQSTVVSTAVLDDKLGFASRPR
Ga0207712_106383771	3300025961	Switchgrass Rhizosphere	MEWKEAIPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRPRTVKVK
Ga0208776_10012841	3300026014	Rice Paddy Soil	MEWKEALPLLQENHTGVATSVTPNGRAQSTIVSTAVLDGKVGFASRPRTVK
Ga0207677_121167751	3300026023	Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDD
Ga0208654_10056333	3300026062	Natural And Restored Wetlands	MEWKEALPLLQENHTGVAISVTAKGRAQATVVSTAVLDGKVG
Ga0207678_101115063	3300026067	Corn Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFASRPRT
Ga0207708_100201506	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFASRPRTVKLKNIQRTGR
Ga0207676_107146262	3300026095	Switchgrass Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFASRPRTVKLKNI
Ga0207676_110685731	3300026095	Switchgrass Rhizosphere	MNWQEALPLLQGNHTGVASTITAKGRVQSTIVSTAVLDGKV
Ga0207674_102930261	3300026116	Corn Rhizosphere	MEWKEVLPLLRANHTGIAISITAKGHAQSTVVSTAVLDDKLGFA
Ga0207675_1026632862	3300026118	Switchgrass Rhizosphere	MEWKEALPLLRENHTGVAISVTPKGHAQSTIVSTALLDDKLGFA
Ga0209969_10540481	3300027360	Arabidopsis Thaliana Rhizosphere	MEWKEALPLLQENHTGVAVSVTPKGRAQSTIVSTAVLDGKVGFASRPRTVKLKNIQRT
Ga0209387_11076721	3300027639	Agricultural Soil	MEWKEALPLLQENHTGVAISVTPKGRAQATIVSTAVLDGKVGFAS
Ga0214468_11875142	3300027647	Soil	MEWKEALPLLQESHTGVAISVTPKGRAQSTIVSTAVLDGKVGFASRGYTVKVKNI
Ga0209074_100835561	3300027787	Agricultural Soil	MEWKAALPLLRENHTGVAISVTPKGHAQSTIVSTALLDDKLGFASRPRTVKLKNIQRTG
Ga0209382_109418652	3300027909	Populus Rhizosphere	MEWKEAFPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKLGFASRPRTVKVKNIQRTG
Ga0268266_110165402	3300028379	Switchgrass Rhizosphere	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLG
(restricted) Ga0255312_11780521	3300031248	Sandy Soil	MEWKEALPLLQDNHTGIAISVTPKGRAQSTVVSTAVLDGKVGFASRGHTVKVKNIQRT
Ga0310886_104597192	3300031562	Soil	MNWQEALPLLQQNHTGVASTITPKGRVQSTIVSTAVLDGKVGVAARPRTVKEKNIGRTGRAT
Ga0310813_104560582	3300031716	Soil	MEWKEALPLLKDHHTGVAISVTSQGRAQSTIVSTAVLDDKIGFALRPR
Ga0310813_109373332	3300031716	Soil	MEWKAALPLLRENHTGVAISITPKGYAQSTIVSTALLDDKLGFASR
Ga0310892_103599522	3300031858	Soil	MEWKAALPLLRENHTGVAISVTPKGHAQSTIVSTALLDD
Ga0307406_103911051	3300031901	Rhizosphere	MNWQEALPLLQQNHTGVASTITPKGRVQSTIVSTAVLDGKVGVAA
Ga0307407_114985252	3300031903	Rhizosphere	MEWKEALPLLQENHTGVVTSITSDGRAQSTVVSTAVLDGK
Ga0310912_111271212	3300031941	Soil	MEWKEALPLLRANHTGIAISITAKGHAQSTVVSTAVLDDKLGFAS
Ga0315910_111648331	3300032144	Soil	MNWQEALPLLQQNHTGVASTITPKGRVQSTIVSTAVLDGKVGVAARPRTVKEKNIGRTGRATIT
Ga0315912_100437434	3300032157	Soil	MNWQEALPLLQNNHTGVAATVTAKGRAQATIVSTAVLDDKV
Ga0307471_1043491931	3300032180	Hardwood Forest Soil	MEWKEALPLLQGNHSGVAISVTPKGRAQSTVVSTAVLDGKVGFASRPHTVKVKNIQRTG
Ga0306920_1011857442	3300032261	Soil	MEWKEALPLLQENHTGVAISVTPKGRAQSTVVSTAVLDGKLGFA
Ga0310812_101413552	3300032421	Soil	MEWKEALPLLKDHHTGVAISVTSQGRAQSTIVSTAVLDDKIGFASRPRT
Ga0310914_108068372	3300033289	Soil	MEWKEALPLLRANHTGIAISITAKGHAQSTVVSTAVLDYKLGFASRPRT
Ga0214471_110153811	3300033417	Soil	MEWKEAFPLLQANHTGVAISVTPKGRAQSTIVSTAVLDGKVGFASRP
Ga0316620_123553942	3300033480	Soil	MDWKEALPLLQENHTGVAISVTPKGRAQSTIVSTAVLDGKI
Ga0364930_0264043_2_136	3300033814	Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTVVSTAVLDGKLGFAS
Ga0326723_0612190_2_163	3300034090	Peat Soil	MNWQEALPLLQGHHTGVASTITPKGRVQSTIVSTAVLDGKVGVAARPRTVKEKN
Ga0364940_0022615_1_105	3300034164	Sediment	MEWKEALPLLQENHTGVAISVTPKGRAQSTIVSTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters