Metagenome / Metatranscriptome Family F079617

Basic Information
Family ID	F079617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	58 residues
Representative Sequence	MKKEETTAAVAAPATDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Number of Associated Samples	78
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	27.83 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (86.087 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.565 % of family members)
Environment Ontology (ENVO)	Unclassified (69.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.739 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1NpDRAFT_101124962 2Ga0068876_1000096035 3Ga0068876_101617693 4Ga0068876_103968702 5Ga0068876_106590201 6Ga0049081_101520514 7Ga0049080_102105641 8Ga0078894_103474882 9Ga0102880_11437184 10Ga0102918_12348983 11Ga0102865_11494644 12Ga0105746_10151772 13Ga0114341_103001612 14Ga0114341_103001635 15Ga0114344_10060891 16Ga0114346_10070102 17Ga0114346_10734687 18Ga0114363_11096561 19Ga0114876_102506411 20Ga0114880_10634747 21Ga0114880_11544243 22Ga0114880_12051772 23Ga0102831_11337283 24Ga0114973_105317944 25Ga0114973_106555521 26Ga0114973_106660191 27Ga0114962_101984313 28Ga0114963_101195183 29Ga0114977_100808284 30Ga0114970_104566184 31Ga0105096_102925853 32Ga0114972_104010091 33Ga0114967_105021631 34Ga0129333_100755765 35Ga0133913_126396114 36Ga0151517_152017 37Ga0164293_103622831 38Ga0164293_107950832 39Ga0181350_11245873 40Ga0181352_11275852 41Ga0181344_12334282 42Ga0181356_10122932 43Ga0181356_11678322 44Ga0181343_11492051 45Ga0181343_11672533 46Ga0181343_11686641 47Ga0181343_12032863 48Ga0181343_12038142 49Ga0181357_12840822 50Ga0181349_12438232 51Ga0181346_12560932 52Ga0181346_12797681 53Ga0181348_12194593 54Ga0181348_12575942 55Ga0181355_11780312 56Ga0181355_13834901 57Ga0181359_10207853 58Ga0181359_11095371 59Ga0181359_11922221 60Ga0181359_11922983 61Ga0207193_11567701 62Ga0211726_102445841 63Ga0211729_101439293 64Ga0214163_10515491 65Ga0222714_1001786612 66Ga0222712_105098872 67Ga0222712_105325041 68Ga0181353_10301102 69Ga0181353_11039892 70Ga0181353_11407151 71Ga0181354_100148115 72Ga0181351_11893911 73Ga0214917_102031332 74Ga0214921_101480765 75Ga0214923_105756401 76Ga0247724_10000082 77Ga0244775_105370673 78Ga0208974_11733843 79Ga0209297_11072372 80Ga0209085_12893462 81Ga0209189_11345994 82Ga0209990_1000229732 83Ga0209990_101326085 84Ga0209401_100240233 85Ga0256335_10649081 86Ga0315907_103789402 87Ga0315907_105965204 88Ga0315907_109450243 89Ga0315907_109511873 90Ga0315899_103430984 91Ga0315908_113758243 92Ga0315900_103418811 93Ga0315909_101049407 94Ga0315909_103650584 95Ga0315909_107534581 96Ga0315901_112123583 97Ga0315906_111853802 98Ga0315905_100890505 99Ga0315905_101016762 100Ga0315905_101545394 101Ga0315905_109074152 102Ga0315905_113590122 103Ga0334994_0521581_260_454 104Ga0334979_0400825_266_433 105Ga0334979_0433181_3_161 106Ga0334986_0319154_510_704 107Ga0334995_0591986_2_160 108Ga0334995_0712387_339_539 109Ga0335025_0376172_124_318 110Ga0335030_0900101_20_217 111Ga0335036_0268535_207_374 112Ga0335036_0809644_1_177 113Ga0335007_0476444_541_741 114Ga0335013_0174534_529_696 115Ga0335039_0512522_363_557
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1NpDRAFT_101124962 2Ga0068876_101617693 3Ga0114346_10734687 4Ga0114880_11544243 5Ga0114973_106555521 6Ga0181357_12840822 7Ga0207193_11567701 8Ga0256335_10649081 9Ga0315909_103650584 10Ga0315909_107534581 11Ga0315906_111853802
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1NpDRAFT_101124962 2Ga0068876_101617693 3Ga0114346_10734687 4Ga0114880_11544243 5Ga0114973_106555521 6Ga0181357_12840822 7Ga0207193_11567701 8Ga0256335_10649081 9Ga0315909_103650584 10Ga0315909_107534581 11Ga0315906_111853802
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.44% β-sheet: 4.69% Coil/Unstructured: 71.88%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF10269	Tmemb_185A	4.35
PF01381	HTH_3	3.48
PF06414	Zeta_toxin	2.61
PF01844	HNH	2.61
PF06067	DUF932	1.74
PF07068	Gp23	0.87
PF10544	T5orf172	0.87
PF07514	TraI_2	0.87
PF00149	Metallophos	0.87
PF00237	Ribosomal_L22	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0091	Ribosomal protein L22	Translation, ribosomal structure and biogenesis [J]	0.87

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	13.91 %
Unclassified	root	N/A	86.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.61 %
Unclassified	root	N/A	86.09 %
Viruses	superkingdom	All Organisms → Viruses	11.30 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	11.30 %
Unclassified	root	N/A	86.09 %

Name	Rank	Taxonomy	Distribution
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.87 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	11.30 %
Unclassified	root	N/A	86.09 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.87 %
Candidatus Heimdallarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota	0.87 %
Unclassified	root	N/A	86.09 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	11.30 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
Candidatus Heimdallarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon	0.87 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11.30 %
Unclassified	root	N/A	86.09 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
Candidatus Heimdallarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon	0.87 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.87 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	6.96 %
Unclassified	root	N/A	86.09 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
Candidatus Heimdallarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon	0.87 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.87 %
Podoviridae sp. ct8Lf7	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ct8Lf7	2.61 %
Unclassified	root	N/A	86.09 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.96 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000929\|NpDRAFT_10112496	Not Available	1982	Open in IMG/M
3300005527\|Ga0068876_10000960	Not Available	22861	Open in IMG/M
3300005527\|Ga0068876_10161769	Not Available	1312	Open in IMG/M
3300005527\|Ga0068876_10396870	Not Available	770	Open in IMG/M
3300005527\|Ga0068876_10659020	Not Available	562	Open in IMG/M
3300005581\|Ga0049081_10152051	Not Available	847	Open in IMG/M
3300005582\|Ga0049080_10210564	Not Available	641	Open in IMG/M
3300005662\|Ga0078894_10347488	Not Available	1343	Open in IMG/M
3300007550\|Ga0102880_1143718	Not Available	625	Open in IMG/M
3300007593\|Ga0102918_1234898	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.13%
Terrestrial	Environmental → Terrestrial	0.87%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.87%
Freshwater	Environmental → Aquatic → Freshwater	89.57%
Marine	Environmental → Aquatic → Marine	9.57%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.48%
Lake	Environmental → Aquatic → Freshwater → Lake	40.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.04%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.87%
River	Environmental → Aquatic → Freshwater → River	0.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	14.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	39.13%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	32.17%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	14.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.87%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.48%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.87%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.61%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.65%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	14.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.61%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.87%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.87%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.57%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	12.17%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.48%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.87%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.87%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.87%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.22%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M

Showing 1 to 10 of 78 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NpDRAFT_101124962	3300000929	Freshwater And Marine	MQKEETTKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0068876_1000096035	3300005527	Freshwater Lake	MQKEETTAAVTAPATEKSKGRPVVATSKRQQRLAEKAARAAVNGGVVKLGRPSTKKVETAPTEA*
Ga0068876_101617693	3300005527	Freshwater Lake	MKNVEVKKQKGRPVTEGSARQKRLAEKAARAAANGGVVKRGRPSTKKTETTEA*
Ga0068876_103968702	3300005527	Freshwater Lake	MQKEETTKQKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA*
Ga0068876_106590201	3300005527	Freshwater Lake	MKKEETTTTKQKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTKKVETATEA*
Ga0049081_101520514	3300005581	Freshwater Lentic	MQKEETTKGKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0049080_102105641	3300005582	Freshwater Lentic	KIKVMQKEETTKGKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0078894_103474882	3300005662	Freshwater Lake	MKKEETTAAVAAPASDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0102880_11437184	3300007550	Estuarine	MKKEETTTAAAATAAPTTDKTKSRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0102918_12348983	3300007593	Estuarine	MKKEETAAATAAPATDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0102865_11494644	3300007639	Estuarine	MKKEETTKQKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSAKKVETAPTEA*
Ga0105746_10151772	3300007973	Estuary Water	MKKEETTTAAAATAAPTTDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0114341_103001612	3300008108	Freshwater, Plankton	MKYLVKAIVPATEKSKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA*
Ga0114341_103001635	3300008108	Freshwater, Plankton	MKKEETTTTKQKGRPVVAASKRQQRLVEKAARAAANGGVVKRGRPSTKKVETATE
Ga0114344_10060891	3300008111	Freshwater, Plankton	MNTEIKETTAAVAAPSSEKVKGRPVVATSKRQQRLAEKAARAAVNGGVVKLGRPSTKKVETAPTEA*
Ga0114346_10070102	3300008113	Freshwater, Plankton	MQKEETTAAVTAPATEKSKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA*
Ga0114346_10734687	3300008113	Freshwater, Plankton	MNNLEVKTTKRGRPVVTTSARQQRLQERAVRAAANNGVVKRGRPATKKVEAPTEA*
Ga0114363_11096561	3300008266	Freshwater, Plankton	MNNLEVKTTKRGRPVVTTSARQQRLQERAVRAAANNGVVKRGRPATKKVEASTEA*
Ga0114876_102506411	3300008448	Freshwater Lake	MKKEETTKQKGRPVVATSKRQQLLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA*
Ga0114880_10634747	3300008450	Freshwater Lake	KGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTKKVETATEA*
Ga0114880_11544243	3300008450	Freshwater Lake	MKKEETTTTKQKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTK
Ga0114880_12051772	3300008450	Freshwater Lake	MKKEETTTAATAATVKSKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTK
Ga0102831_11337283	3300008996	Estuarine	MINSEETTKQKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA*
Ga0114973_105317944	3300009068	Freshwater Lake	AAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0114973_106555521	3300009068	Freshwater Lake	MKKEETTAAAIAAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRG
Ga0114973_106660191	3300009068	Freshwater Lake	MKKEKTTAAATAAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRG
Ga0114962_101984313	3300009151	Freshwater Lake	MNTEETTAAVAAPVSEKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA*
Ga0114963_101195183	3300009154	Freshwater Lake	MNTEIKETTVTASDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA*
Ga0114977_100808284	3300009158	Freshwater Lake	MKTEETTAAVAAPASDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA*
Ga0114970_104566184	3300009163	Freshwater Lake	MKKEETTAAATAAPTADKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0105096_102925853	3300009170	Freshwater Sediment	MNTEETTAAVAAPASDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0114972_104010091	3300009187	Freshwater Lake	MKKEETTAAAIAAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA*
Ga0114967_105021631	3300010160	Freshwater Lake	MQKEETAKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA*
Ga0129333_100755765	3300010354	Freshwater To Marine Saline Gradient	MNNLEVKTAKRGRPVVTTSARQQRLQERAVRAAANNGVVKRGRPATKKVEASTEA*
Ga0133913_126396114	3300010885	Freshwater Lake	MNTEIKETTVTASDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETA
Ga0151517_152017	3300011113	Freshwater	MNNSETTTKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKQVETATEA*
Ga0164293_103622831	3300013004	Freshwater	MQKEETAKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKV
Ga0164293_107950832	3300013004	Freshwater	MKTEETTTSATAENKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKV
Ga0181350_11245873	3300017716	Freshwater Lake	MNTEIKETTVTVADKSKRRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181352_11275852	3300017747	Freshwater Lake	MQKEETTKGKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181344_12334282	3300017754	Freshwater Lake	MKTEETTAAVAAPASDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181356_10122932	3300017761	Freshwater Lake	MKKEETTAAVAAPTTNKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSAKKVETAPAEA
Ga0181356_11678322	3300017761	Freshwater Lake	MKKEETTAAATAAPSSDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181343_11492051	3300017766	Freshwater Lake	MKKEETTTKQKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0181343_11672533	3300017766	Freshwater Lake	MKTEKTTPAVTTAPASEKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRP
Ga0181343_11686641	3300017766	Freshwater Lake	MKTEKTTPAVTTVPASEKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRP
Ga0181343_12032863	3300017766	Freshwater Lake	MQKEETTKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVE
Ga0181343_12038142	3300017766	Freshwater Lake	MNTEIKETTTTVAAPASDKSKGRPVVATSKRQQRLAEKAARAAANGGVVK
Ga0181357_12840822	3300017777	Freshwater Lake	MNTEIKETTVTVADKSKGRPVVATSKRQQRLAEKAARAAANGGVV
Ga0181349_12438232	3300017778	Freshwater Lake	MNNSETTTAAVTAPATEKSKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA
Ga0181346_12560932	3300017780	Freshwater Lake	MNTEIKETTAAVAAPASEKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181346_12797681	3300017780	Freshwater Lake	MNTEIKETTVTVADKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEAS
Ga0181348_12194593	3300017784	Freshwater Lake	MKKEETTAAATAAPSSDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPST
Ga0181348_12575942	3300017784	Freshwater Lake	MKKEETTVAPASDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPST
Ga0181355_11780312	3300017785	Freshwater Lake	MNTEIKETTVTASDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181355_13834901	3300017785	Freshwater Lake	MKKETTPAAVTTAPASEKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0181359_10207853	3300019784	Freshwater Lake	MNNLEVKTTKRGRPVVTTSARQQRLQERAVRAAANNGVVKRGRPATKKVETAPTEA
Ga0181359_11095371	3300019784	Freshwater Lake	MKTEETTAAVAAPVSDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181359_11922221	3300019784	Freshwater Lake	MKKEETTTAATAAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181359_11922983	3300019784	Freshwater Lake	MKKEETTAAATAAPSSDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRG
Ga0207193_11567701	3300020048	Freshwater Lake Sediment	MITVVEIKKPKGRPVVEGSARQKRLAERAARAAANGGVIKRGRPIAKKAVVTTEV
Ga0211726_102445841	3300020161	Freshwater	KQKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA
Ga0211729_101439293	3300020172	Freshwater	MKKEETTVAVATPATTKQKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSIKQVETATEA
Ga0214163_10515491	3300021141	Freshwater	MKKEETTAAATAAPTTDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0222714_1001786612	3300021961	Estuarine Water	MKNVEVKESKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0222712_105098872	3300021963	Estuarine Water	MKKEETTKQKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0222712_105325041	3300021963	Estuarine Water	MKKEKTTPAVTTAPASDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKR
Ga0181353_10301102	3300022179	Freshwater Lake	MKNVEVKKQKGRPVTEGSARQKRLAEKAARAAANGGVVKRGRPSTKKTETTEA
Ga0181353_11039892	3300022179	Freshwater Lake	MKNVEVKTGKKGRPVTEGSARQKRLAEKAARAAANGGVIKRGRPSTKKAEAEPAA
Ga0181353_11407151	3300022179	Freshwater Lake	MQKEETTKGKGRPVVATSKRQQRLAEKAARAAANGGVVKRGR
Ga0181354_100148115	3300022190	Freshwater Lake	IKETTVTVADKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0181351_11893911	3300022407	Freshwater Lake	MKKEETTAAATAAPSSDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA
Ga0214917_102031332	3300022752	Freshwater	MKKETTPAATAAPVENKTKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0214921_101480765	3300023174	Freshwater	MKKEETTTSATAENKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0214923_105756401	3300023179	Freshwater	MKKEETAKTKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0247724_10000082	3300024239	Deep Subsurface Sediment	MKTEETTAAVAAPASEKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0244775_105370673	3300024346	Estuarine	MINSEETTKQKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA
Ga0208974_11733843	3300027608	Freshwater Lentic	KIKVMQKEETTKGKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0209297_11072372	3300027733	Freshwater Lake	MKTEETTAAVAAPASDKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA
Ga0209085_12893462	3300027741	Freshwater Lake	MKTEETTAETTAAPASDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0209189_11345994	3300027747	Freshwater Lake	MNTEETTAAVAAPVSEKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0209990_1000229732	3300027816	Freshwater Lake	MQKEETTAAVTAPATEKSKGRPVVATSKRQQRLAEKAARAAVNGGVVKLGRPSTKKVETAPTEA
Ga0209990_101326085	3300027816	Freshwater Lake	QKGRPVTEGSARQKRLAEKAARAAANGGVVKRGRPSTKKTETTEA
Ga0209401_100240233	3300027971	Freshwater Lake	MKKEETTAAAIAAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0256335_10649081	3300028112	Freshwater	MKKVKVEETKKGKGRPITEGSARQKRLAERAARAQANGGVIKRGRPASKKTDTVAEAAPAEA
Ga0315907_103789402	3300031758	Freshwater	MQKEETTKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0315907_105965204	3300031758	Freshwater	MKKEETTTTKQKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTKKVETATEA
Ga0315907_109450243	3300031758	Freshwater	MKKEETTKQKGRPVVATSKRQQLLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA
Ga0315907_109511873	3300031758	Freshwater	MQKEETTKQKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA
Ga0315899_103430984	3300031784	Freshwater	MNTEIKETTAAVAAPSSEKVKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0315908_113758243	3300031786	Freshwater	MKKEETTTAATVAPATVKSKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTKKVETATEA
Ga0315900_103418811	3300031787	Freshwater	MKKEETTKQKGRPVVATSKRQQRLAEKAARAAVNGGVVKRGRPSTKKVETAPTEA
Ga0315909_101049407	3300031857	Freshwater	MQKEETTAAVAAPASEKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0315909_103650584	3300031857	Freshwater	ETTTAATAATVKSKGRPVVAASKRQQRLIEKAARAAANGGVVKRGRPSTKKVETATEA
Ga0315909_107534581	3300031857	Freshwater	MKKEETTVAVATPTTTKQKGRPVVAASKRQQRLIEKATRAAANGGV
Ga0315901_112123583	3300031963	Freshwater	IKVMNTEIKETAKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0315906_111853802	3300032050	Freshwater	MQKEETTKTKGRPVVATSKRQQRLAEKAARAAANGG
Ga0315905_100890505	3300032092	Freshwater	MKKEETPAATAAPTTDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0315905_101016762	3300032092	Freshwater	MNTEIKETTAAVAAPASDKTKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPAEA
Ga0315905_101545394	3300032092	Freshwater	MKKEETTAAVAAPATDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0315905_109074152	3300032092	Freshwater	MKKEETTAAATAAPTTDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0315905_113590122	3300032092	Freshwater	MKKEETTAAVTAAPAPDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRG
Ga0334994_0521581_260_454	3300033993	Freshwater	MKTEETTAAVAAPSSDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0334979_0400825_266_433	3300033996	Freshwater	MQKEETAKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0334979_0433181_3_161	3300033996	Freshwater	MKTEETTTSATAENKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTK
Ga0334986_0319154_510_704	3300034012	Freshwater	MNTEETTAAVAAPVSDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0334995_0591986_2_160	3300034062	Freshwater	EETTKQKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0334995_0712387_339_539	3300034062	Freshwater	MKKEETTTAAATAAPASDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0335025_0376172_124_318	3300034096	Freshwater	MNTEETTAAVAAPVSDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0335030_0900101_20_217	3300034103	Freshwater	MKKETTPAAATAAPASDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPTEA
Ga0335036_0268535_207_374	3300034106	Freshwater	MKTEETTKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA
Ga0335036_0809644_1_177	3300034106	Freshwater	MKTEETTTSATAENKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAP
Ga0335007_0476444_541_741	3300034283	Freshwater	MKKEETTTAAATAAPTTDKSKGRPVVATSKRQQRLAEKAARAARNGGVVKRGRPSTKKVETAPTEA
Ga0335013_0174534_529_696	3300034284	Freshwater	MQKEETAKTKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA
Ga0335039_0512522_363_557	3300034355	Freshwater	MNTEETTAAVAAPVSDKSKGRPVVATSKRQQRLAEKAARAAANGGVVKRGRPSTKKVETAPAEA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences