Metagenome / Metatranscriptome Family F079469

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079469
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	80 residues
Representative Sequence	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVPNGSGSIALVKHSDSVSAKPRRRVTLDEILEGIPEGADMEKIDWGPDRGAEIW
Number of Associated Samples	83
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.57 %
% of genes near scaffold ends (potentially truncated)	61.74 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (27.826 % of family members)
Environment Ontology (ENVO)	Unclassified (47.826 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.34% β-sheet: 17.24% Coil/Unstructured: 72.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02452	PemK_toxin	28.70
PF01148	CTP_transf_1	15.65
PF00571	CBS	5.22
PF01380	SIS	3.48
PF02670	DXP_reductoisom	3.48
PF13288	DXPR_C	2.61
PF00587	tRNA-synt_2b	1.74
PF00665	rve	0.87
PF02789	Peptidase_M17_N	0.87
PF12728	HTH_17	0.87
PF13313	DUF4082	0.87
PF01255	Prenyltransf	0.87
PF04073	tRNA_edit	0.87
PF01370	Epimerase	0.87
PF08436	DXP_redisom_C	0.87
PF16657	Malt_amylase_C	0.87
PF03061	4HBT	0.87
PF04461	DUF520	0.87
PF13620	CarboxypepD_reg	0.87
PF02163	Peptidase_M50	0.87
PF05015	HigB-like_toxin	0.87
PF11412	DsbC	0.87
PF12158	DUF3592	0.87
PF05016	ParE_toxin	0.87
PF00196	GerE	0.87
PF02812	ELFV_dehydrog_N	0.87
PF03693	ParD_antitoxin	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	28.70
COG0743	1-deoxy-D-xylulose 5-phosphate reductoisomerase	Lipid transport and metabolism [I]	4.35
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.87
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	0.87
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.87
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	0.87
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.87
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.87
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.87
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.87
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.87
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	28.70 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.74 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	27.83 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.74 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.87 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27.83 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	1.74 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2.61 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	1.74 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.87 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.87 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.87 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2.61 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.74 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.87 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.87 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.87 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2.61 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.74 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.87 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.87 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.87 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009633\|Ga0116129_1000412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	28374	Open in IMG/M
3300009637\|Ga0116118_1176273	Not Available	680	Open in IMG/M
3300009643\|Ga0116110_1009664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4049	Open in IMG/M
3300009665\|Ga0116135_1072348	Not Available	1219	Open in IMG/M
3300009665\|Ga0116135_1121840	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300014151\|Ga0181539_1095860	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300014151\|Ga0181539_1223011	Not Available	715	Open in IMG/M
3300014158\|Ga0181521_10405097	Not Available	671	Open in IMG/M
3300014160\|Ga0181517_10252439	Not Available	943	Open in IMG/M
3300014160\|Ga0181517_10444839	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300014160\|Ga0181517_10666983	Not Available	518	Open in IMG/M
3300014164\|Ga0181532_10305706	Not Available	899	Open in IMG/M
3300014167\|Ga0181528_10275936	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300014169\|Ga0181531_10111463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1640	Open in IMG/M
3300014169\|Ga0181531_10538175	Not Available	722	Open in IMG/M
3300014199\|Ga0181535_10010412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8729	Open in IMG/M
3300014199\|Ga0181535_10124294	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300014199\|Ga0181535_10297310	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300014201\|Ga0181537_10247703	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300014201\|Ga0181537_11066455	Not Available	546	Open in IMG/M
3300014489\|Ga0182018_10652159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	550	Open in IMG/M
3300014491\|Ga0182014_10390359	Not Available	696	Open in IMG/M
3300014492\|Ga0182013_10007883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11594	Open in IMG/M
3300014492\|Ga0182013_10422134	Not Available	710	Open in IMG/M
3300014493\|Ga0182016_10000184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	76109	Open in IMG/M
3300014493\|Ga0182016_10000557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	46531	Open in IMG/M
3300014493\|Ga0182016_10322154	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300014493\|Ga0182016_10399374	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300014493\|Ga0182016_10584526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	637	Open in IMG/M
3300014658\|Ga0181519_10885168	Not Available	553	Open in IMG/M
3300014839\|Ga0182027_10006460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17530	Open in IMG/M
3300014839\|Ga0182027_10105732	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300016700\|Ga0181513_1209987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	597	Open in IMG/M
3300017931\|Ga0187877_1189035	Not Available	812	Open in IMG/M
3300017938\|Ga0187854_10272753	Not Available	729	Open in IMG/M
3300017941\|Ga0187850_10439609	Not Available	567	Open in IMG/M
3300017988\|Ga0181520_10010700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12229	Open in IMG/M
3300017988\|Ga0181520_10026201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	6335	Open in IMG/M
3300018023\|Ga0187889_10478572	Not Available	532	Open in IMG/M
3300018030\|Ga0187869_10165201	Not Available	1093	Open in IMG/M
3300018046\|Ga0187851_10297950	Not Available	935	Open in IMG/M
3300018046\|Ga0187851_10864779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	508	Open in IMG/M
3300018047\|Ga0187859_10305969	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300018047\|Ga0187859_10326687	Not Available	833	Open in IMG/M
3300018047\|Ga0187859_10921657	Not Available	503	Open in IMG/M
3300022849\|Ga0224531_1030375	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300022849\|Ga0224531_1050668	Not Available	648	Open in IMG/M
3300022872\|Ga0224526_1025357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1313	Open in IMG/M
3300022872\|Ga0224526_1077355	Not Available	616	Open in IMG/M
3300023068\|Ga0224554_1001908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11884	Open in IMG/M
3300023091\|Ga0224559_1179136	Not Available	741	Open in IMG/M
3300025460\|Ga0208562_1020034	Not Available	1609	Open in IMG/M
3300025463\|Ga0208193_1000305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30661	Open in IMG/M
3300025469\|Ga0208687_1085152	Not Available	688	Open in IMG/M
3300027889\|Ga0209380_10548983	Not Available	672	Open in IMG/M
3300028087\|Ga0255354_1095132	Not Available	528	Open in IMG/M
3300028090\|Ga0255349_1098691	Not Available	527	Open in IMG/M
3300028560\|Ga0302144_10047972	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300028560\|Ga0302144_10089223	Not Available	990	Open in IMG/M
3300028560\|Ga0302144_10199483	Not Available	647	Open in IMG/M
3300028574\|Ga0302153_10194026	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300028745\|Ga0302267_10124416	Not Available	1225	Open in IMG/M
3300028748\|Ga0302156_10369991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	629	Open in IMG/M
3300028766\|Ga0302269_1232014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	513	Open in IMG/M
3300028800\|Ga0265338_10020817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6876	Open in IMG/M
3300028808\|Ga0302228_10299272	Not Available	721	Open in IMG/M
3300028860\|Ga0302199_1133794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	781	Open in IMG/M
3300028867\|Ga0302146_10176069	Not Available	853	Open in IMG/M
3300028873\|Ga0302197_10000725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33054	Open in IMG/M
3300028882\|Ga0302154_10057414	Not Available	2198	Open in IMG/M
3300028909\|Ga0302200_10270251	Not Available	824	Open in IMG/M
3300029817\|Ga0247275_1022319	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300029882\|Ga0311368_10105303	Not Available	2398	Open in IMG/M
3300029883\|Ga0311327_10367226	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300029907\|Ga0311329_10818608	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300029911\|Ga0311361_11520350	Not Available	503	Open in IMG/M
3300029913\|Ga0311362_10359131	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300029913\|Ga0311362_10690417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	877	Open in IMG/M
3300029915\|Ga0311358_10440145	Not Available	1038	Open in IMG/M
3300029916\|Ga0302148_1031636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1538	Open in IMG/M
3300029917\|Ga0311326_10072117	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300029922\|Ga0311363_11499656	Not Available	541	Open in IMG/M
3300029952\|Ga0311346_10321926	Not Available	1569	Open in IMG/M
3300029952\|Ga0311346_11341391	Not Available	546	Open in IMG/M
3300029953\|Ga0311343_10485638	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300029953\|Ga0311343_10993541	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300029992\|Ga0302276_10387622	Not Available	580	Open in IMG/M
3300030007\|Ga0311338_10198608	Not Available	2316	Open in IMG/M
3300030053\|Ga0302177_10569172	Not Available	581	Open in IMG/M
3300030053\|Ga0302177_10663981	Not Available	529	Open in IMG/M
3300030503\|Ga0311370_10882699	Not Available	1016	Open in IMG/M
3300030506\|Ga0302194_10289506	Not Available	652	Open in IMG/M
3300030520\|Ga0311372_11227418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	957	Open in IMG/M
3300030617\|Ga0311356_10998153	Not Available	782	Open in IMG/M
3300031027\|Ga0302308_10340863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	914	Open in IMG/M
3300031259\|Ga0302187_10270514	Not Available	848	Open in IMG/M
3300031524\|Ga0302320_10246141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2466	Open in IMG/M
3300031524\|Ga0302320_10925196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	939	Open in IMG/M
3300031524\|Ga0302320_11355363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	713	Open in IMG/M
3300031525\|Ga0302326_13365863	Not Available	535	Open in IMG/M
3300031708\|Ga0310686_118195183	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300031788\|Ga0302319_10876336	Not Available	876	Open in IMG/M
3300031788\|Ga0302319_11729656	Not Available	544	Open in IMG/M
3300032515\|Ga0348332_14000997	Not Available	547	Open in IMG/M
3300032562\|Ga0316226_1336534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	568	Open in IMG/M
3300032665\|Ga0316221_1233890	Not Available	597	Open in IMG/M
3300032676\|Ga0316229_1181950	Not Available	832	Open in IMG/M
3300033402\|Ga0326728_10002796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	56903	Open in IMG/M
3300033402\|Ga0326728_10631501	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300033405\|Ga0326727_10025209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11171	Open in IMG/M
3300033405\|Ga0326727_10105677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3657	Open in IMG/M
3300033405\|Ga0326727_10120607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3291	Open in IMG/M
3300033755\|Ga0371489_0092512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1795	Open in IMG/M
3300034065\|Ga0334827_055080	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300034282\|Ga0370492_0001281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	9680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.35%
Aquatic	Environmental → Aquatic	34.78%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	50.43%
Freshwater	Environmental → Aquatic → Freshwater	34.78%
Soil	Environmental → Terrestrial → Soil	13.04%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	50.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.43%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.74%
Loam	Environmental → Terrestrial → Soil → Loam	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	50.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.22%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.96%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	27.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	15.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.22%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.61%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116129_100041226	3300009633	Peatland	MTTQIVRVGNTLTVEIPDELAAQAELTPGQAVEWVSNGSGSISLVKQSNVSSKPRKRKTLEELLEGVPEGTRIPENDWGSPRGAEVW*
Ga0116118_11762732	3300009637	Peatland	TVEIPEELVAQASLPVGEPVEWVSTGSGGIALVKQADIASVNPRKRKTLEEILEGIPERASMEEIDWGPPRGAEVW*
Ga0116110_10096641	3300009643	Peatland	VEIPEELLIQASLPVGEPLEWVSNGNGSITLVKPSATVNPRKRKTLEELLEGIPEGTCIPEYDWGPPRGVEVW*
Ga0116135_10723481	3300009665	Peatland	MIYQGVGPITTRIVRVGNTLTVEIPEQLAAEAALPVGEPMEWVANGVGSIALVKQSDVVSANPRKRKTLDEILEGIPEGASIPEFDWGATRGVEFW*
Ga0116135_11218401	3300009665	Peatland	EELVAQAALPVGEPVEWVLHGNGSIALVKQSNSPAKPRKRMTLEELLEGIPEGADMEEIDWGPPRGAEVW*
Ga0181539_10958603	3300014151	Bog	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVPNGSGSLVLVKKAEAAAAKPRRRITLDEILEGIPEGAEMEKIDWGPDRGAEVW*
Ga0181539_12230111	3300014151	Bog	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVASGNGSITLVKQSTSTRPRKRKTLEELLEGIPEGTRIPEYDWSPPRGVEVW*
Ga0181521_104050971	3300014158	Bog	IPEELVAQASLPVGEPVEWVSTGSGGIALVKQADIASVNPRKRKTLEEILEGIPERASMEEIDWGPPRGAEVW*
Ga0181517_102524392	3300014160	Bog	MTTQIVRVGNTLTVEIPEELVAQAALPVGEPVEWVANGAGSIALVKQSDGAAKPRKRKTLDEILEGIPDGAEMEKIDWGPDRGAEAW*
Ga0181517_104448391	3300014160	Bog	TLTVEIPEQLAAEAALPVGEPMEWVANGVGSIALVKQSDVVSANPRKRKTLDEILEGIPEGASIPEFDWGATRGVEFW*
Ga0181517_106669832	3300014160	Bog	MISIGVDPMTTRIMRVGNTLTVEIPEEMVAQASLPIGEPVEWVSNGSGGIALVKSSGQSPAIAPAR
Ga0181532_103057061	3300014164	Bog	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVTTGSGGIALVKYSGQSPAIPPTRM
Ga0181528_102759362	3300014167	Bog	MTTQIVRVGNTLTVEIPEELLAQTALPVGEPLEWVPNGSGGITLVSSQKSPAMKGPATMTLVELLEGIPEGAEMEKIDWGPDRGAEVW*
Ga0181531_101114632	3300014169	Bog	MTTRIVRVGNTLTVEIPEELVAQAALAVGEPLQCVPNGNGSIALVKTTAAKPHRRVTLDEILESIPEDAEMEKIEWGADRGAEVW*
Ga0181531_105381752	3300014169	Bog	MTTQIVRVGNTLTVDIPEELVAQAALPVGEPVEWVPNGSGGITLVKKLSTSAKPRKRKTLEEILQGIPEGAEMENIEWGPDRGAEVW*
Ga0181535_1001041213	3300014199	Bog	MTTRIIRVGNTLTVEIPEELVAQAALSVGEPVEWVSNGSGGLALVRPSDSTAAKPRMRKTLDEILEGTPEGARMPEIDWGQPRGVEFW*
Ga0181535_101242943	3300014199	Bog	MTTRIVRVGNTLTVEIPEELVTQASLPVGEPVEWVSNGSGSIALVKKFESSSASPRKRKTLDEILEGIPEGAHMEEVDWGSPRGAEFW*
Ga0181535_102973102	3300014199	Bog	MTTQIVRVGNSLTVEIPEELAAQAKLAPGEPVEWVANGSGSIALVKQSNSPAKMRKRKTLEELLDGIPEGAEMEKIDWGPVRGAEVW*
Ga0181537_102477033	3300014201	Bog	VRVGNSLTVEIPEELAAQAKLAPGEPVEWVANGSGSIALVKQSNSPAKMRKRKTLEELLDGIPEGAEMEKIDWGPVRGAEVW*
Ga0181537_110664552	3300014201	Bog	GVSPMTTHIVRVGNALTVEIPEDLAAQAELAPGEPVSWVLNGSGSIALVKQSDPAAKPRRRMTLEELLEGIPEGAKMEKIDWGPDRGAEVW*
Ga0182018_106521592	3300014489	Palsa	LPVGEPVEWVPNEGGGIALVKKSDAAPAVPRKRMTLEALLEGLPENAQMEEIDWGPPRGAEVW*
Ga0182014_103903591	3300014491	Bog	RIVRVGNTLTVEIPEELVAQASLPVGEPVEWVSNGSGGIALVKQTGIASANPRKRKTLEEILEGIPEGASMEEIDWGPPRGAEVW*
Ga0182013_100078831	3300014492	Bog	MTTQIVRVGNTLTVEIPEELVAQASLPVGEPLEWVSNGNGSIALVKQSTSTRPRKRRTLEELLEGIPEGTRIPEYDGGPPRGVEVW*
Ga0182013_104221342	3300014492	Bog	EELVAQAELPVGEPVEWVANGNGSLALVSTSKSLNPKNPADMTIEELLDGIPEGAEMEKIDWGPDRGAEVW*
Ga0182016_1000018428	3300014493	Bog	MTTQIVRVGNTLTVEIPEELVAQAELPVGEPVEWVANGNGSLALVSTSKSLNPKNPADMTIEELLDGIPEGAEMEKIDWGPDRGAEVW*
Ga0182016_100005573	3300014493	Bog	MTTRIVRVGNTLTVEIPEELVTQAALPVGDPVEWVPNGSGSIALVKQSNSPSKPRKPKTLDEILEGIPEGAEMERIDWGPDRGAEVW*
Ga0182016_103221541	3300014493	Bog	AIRAMIPTGVCQMTTQIVRVGNTLTVEIPEELVAQADLPVGEPVEWMANGSGSLALVKPTAAKPRRRITLDQILESIPDNAEMEKIDWGSDRGAEVW*
Ga0182016_103993741	3300014493	Bog	VRVENTLTVEIPEELAMQAELTPGELVEWVPNGSGSLALVKQSNPPGKPRKRITLEELLDSIPEGAEMEKIEWGADRGAEVW*
Ga0182016_105845262	3300014493	Bog	MTTQIVRIGNTLTVEIPEELLAQSSLPVGEPVEWIPNGFGSLTLVKTTAAKPHQRITLNEILESIPEGAELEKIEWGPDR
Ga0181519_108851682	3300014658	Bog	MTTQIVRVGNTLTVEIPEKLVTEAALPVGEPVEWVRNGNGSIALIRPSEAPIRPKQITLDELLEGIPEGAVM
Ga0182027_1000646016	3300014839	Fen	MTTRIVRVGNTLTVEIPEELVAQASLPVGEPVEWVSNGRGSLALVKSFASAPANPRKRKTLDEILEGIPEGACMQEIDWGPARGAEVW*
Ga0182027_101057327	3300014839	Fen	MTTRIVRVGNTLTVEIPEELAAEAALPVGEPVEWVRNGNNGIALVKHSDSVTVNRRKRKTLEEILEGIP
Ga0181513_12099872	3300016700	Peatland	SRMTTRIVRVGNTLTVEIPEELVTQASLPVGEPVEWVSNGSGSIALVKKFESSSASPRKRKTLDEILEGIPEGAHMEEVDWGSPRGAEFW
Ga0187877_11890351	3300017931	Peatland	MTTRIVRVRNTLTVEIPEELLIQASLPVGEPLEWVSNGNGSITLVKPSATVNPRKRKTLEELLEGIPEGNCIPEYDWGPPRGVEVW
Ga0187854_102727532	3300017938	Peatland	MTTQISRVGNTLTVEIPEELLIQASLPVGEPLEWVSNGNGSITLVKPSATVNPRKRKTLEEPLEGIPEGTCIPEYDWGPPRGVEVW
Ga0187850_104396092	3300017941	Peatland	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVPNGSGSIALVKHSDSVSAKPRRRVTLDEILEGIPEG
Ga0181520_1001070016	3300017988	Bog	MTTRIIRVGNTLTVEIPEELVAQAALSVGEPVEWVSNGSGGLALVRPSDSTAAKPRMRKTLDEILEGTPEGARMPEIDWGQPRGVEFW
Ga0181520_100262014	3300017988	Bog	MTTRIVRVGNTLTVEIPEELVTQASLPVGEPVEWVSNGSGSIALVKKFESSSASPRKRKTLDEILEGIPEGAHMEEVDWGSPRGAEFW
Ga0187889_104785721	3300018023	Peatland	MTTQISRVGNTLTVEIPEELLIQASLPVGEPLEWVSNGNGSITLVKPSATVNPRKRKTLEELLEGIPEGT
Ga0187869_101652012	3300018030	Peatland	MTTRIVRVGNTLTVEIPEELVAQASLPVGEPVEWVSTGSGGIALVKQADIASVNPRKRKTLE
Ga0187851_102979503	3300018046	Peatland	MTTQIVRVGNSLTVEIPEELAAQAKLAPGEPVEWVANGSGSIALVKQSNSPAKMRKRKTLEELLDGIPEGAEMEKIDWGPVRGAEVW
Ga0187851_108647792	3300018046	Peatland	MNVTTHETLTVSDEELAVLAELAPGEPVEWVPNGSGSIALVKQSNPSAKPRKRKTLEELLEGIPEGAEMEKINWGPDRGAEVW
Ga0187859_103059693	3300018047	Peatland	GNTLTVEIPEELVAQASLPVGEPVEWVSTGSGGIALVKQADIASVNPRKRKTLEEILEGIPERASMEEIDWGPPRGAEVW
Ga0187859_103266871	3300018047	Peatland	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVPNGSGSIALVKHSDSVSAKPRRRVTLDEILEGIPEGADMEKIDWGPDRGAEIW
Ga0187859_109216572	3300018047	Peatland	MTTQIVRVGNTLTVEIPEELAVLAELAPGEPVEWVPNGSGSIALVKQSNPSAKPRKRKTLEELLEGIPEGAEMEKINWGPDRGAEVW
Ga0224531_10303751	3300022849	Soil	MTTRIVRVGNTLTVEIPEALVAQASLPVGEPVEWVTNGSGGIALVKQSDSAPSNPRKRKTLDEILEGIPEDARMEEINWGPPRGVEFW
Ga0224531_10506682	3300022849	Soil	MTTRIVRVGNTLTVEIPEKLAAEASLPVGEPVEWVSNGIGSIALVKQSGVASTNSRKRKTLEE
Ga0224526_10253572	3300022872	Soil	MTTQIVRVGNTLTVEIPEELVAQASLPVGEPLEWVSNGNGSIALVKQSTSTRPRKRRTLEELLEGIPEGTRIPEYDGGPPRGVEVW
Ga0224526_10773552	3300022872	Soil	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVSSGNGSITLVKQSTFTHTRKRKTLEELLEGIPEGTRIPEYDWGPPR
Ga0224554_10019089	3300023068	Soil	MTTRIVRVGNTLTVEIPEELVAEAALPVGEPVEWVLNGSGSIALVKKSESSAATPRKRKTLDEILEGIPEGAHMEEIDWDPPRGAEFW
Ga0224559_11791361	3300023091	Soil	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVSSGNGSIMLVKQSNVTRPHKRKTLEELLEGLEEG
Ga0208562_10200341	3300025460	Peatland	EELVAQAALPVGEPVEWVPNESGGIALIKSAQSAPANPRKRKTLEEILEGIPEGASMQEIDWGPPRGVEFW
Ga0208193_100030527	3300025463	Peatland	MTTQIVRVGNTLTVEIPDELAAQAELTPGQAVEWVSNGSGSISLVKQSNVSSKPRKRKTLEELLEGVPEGTRIPENDWGSPRGAEVW
Ga0208687_10851521	3300025469	Peatland	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVPNESGGIALIKSAQSAPANPRKRKTLEEILEGIPEGASMQE
Ga0209380_105489831	3300027889	Soil	MTTRIMRVGNTLIVEIPEELVMRAALPVGEPVEWVPNEGGGIALVKKLDSAVAVPRKRITLAELLEGLPEHAQMEEIDWGP
Ga0255354_10951321	3300028087	Soil	AQASLPVGEPVEWVANGSGGIALVKSSDSTSANPRRRKTLEAILAGIPEEARMEEIDWGSPRGVEFW
Ga0255349_10986912	3300028090	Soil	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVSSGNGSITLVKQSTFTHTRKRKTLEELLE
Ga0302144_100479721	3300028560	Bog	TEASLPVGEPLQWVPNGSGSIVLVKSSEPVSATARKRMTLDEILEGIPENASMEDVDWGPPRGAEIW
Ga0302144_100892232	3300028560	Bog	MTTQIVRVGNTLTVEIPEELVAQADLPVGEPVEWMANGSGSLALVKPTAAKPRRRITLDQILESIPDNAEMEKIDWGSDRGAEVW
Ga0302144_101994831	3300028560	Bog	MTTQIVRVGNTLTVEIPEELVAQASLPVGEPLEWVSNGNGSIALVKQSTSTRPRKRRTLEELLEGIPEGTRIPEYDW
Ga0302153_101940261	3300028574	Bog	RIVRVGNTLTVEIPEELVAEASLPVGEPVEWVSNGSGGIALVKSSQSTPANPRKRKTLEDILEGIPEGATMEEMDWGPPRGVEVW
Ga0302267_101244162	3300028745	Bog	MTTQIVRVGNTLTVEIPEELVAQASLPVGEPLEWVSNGNGSIALVKQSTSTRPRKRRTLEELLEGIPEGTRIPEYDWG
Ga0302156_103699912	3300028748	Bog	EELVAQAALPVGEPLEWVANGQGSIALVSSSKSPARKNPADMTIEELMEGIPEGAEMEKIDWGPDRGAEVW
Ga0302269_12320142	3300028766	Bog	MTTRIVRVGNTLMVEIPEELVTEASLPVGEPLQWVPNGSGSIVLVKSSEPVSATARKRMTLDEILEG
Ga0265338_100208173	3300028800	Rhizosphere	MTTRIVRIGNTLTVEIPEELVAQAALPVGEPVEWVSNGTGSIALIKKPVGAAAGHRRRMTLEQLLEGIPDGAEMEKIDWGPDRGAEIW
Ga0302228_102992722	3300028808	Palsa	MTTRIVRVGSTLSVEIPEELVAQAALPVGEPVEWVSNGSGGIALVKSAGKSPANHPTRMTLEELMEGLE
Ga0302199_11337941	3300028860	Bog	MTTRIVRVGNTLTVEVPEELVAQASLRVGEPVEWVPNGAGGLSLVSKSEASVKPRRRMTLDKLLEG
Ga0302146_101760691	3300028867	Bog	TLMVEIPEELVTEASLPVGEPLQWVPNGSGSIVLVKSSEPVSATARKRMTLDEILEGIPENASMEDVDWGPPRGAEIW
Ga0302197_100007251	3300028873	Bog	MTTRIVRVGNTLTVEVPEELVAQASLRVGEPVEWVPNGAGGLSLVSKSEASVKPRRRMTLDKLLEGIPEGA
Ga0302154_100574143	3300028882	Bog	MTTQIVRVGNTLTVEIPEELVAQASLPVGEPLEWVSNGNGSIALVKQSTSTRPRKRRTLEELLEGIPEGTRIP
Ga0302200_102702512	3300028909	Bog	MTTRIVRVGNTLTVEVPEELVAQASLRVGEPVEWVPNGAGGLSLVSKSEASVKPRRRMTLDKLLEGIPEGAEMERIDWGPDRG
Ga0247275_10223192	3300029817	Soil	MTTRIVRVRNTLTVEIPEELLIQASLPVGEPLEWVSNGNGSITLVKPSATVNPRKRKTLEELLEGIPEGTCIPEYDWGPPRGVEVW
Ga0311368_101053034	3300029882	Palsa	VGPMTTRIVRVGNTLSVEIPEELVVQAALPVGEPVEWISNGTGGIALVRQADSAPANPRKRMTLEELLEGIPEGATMEEIDWGLPRGVEFW
Ga0311327_103672263	3300029883	Bog	MTTQIIRVGNTLTVEIPEHLVAQASLPVGEPVEWVANEFGSLSLVKTTAAKPRRRITLDEILKSIPEGAE
Ga0311329_108186082	3300029907	Bog	MTTQIIRVGNTLTVEIPEHLVAQASLPVGEPVEWVANEFGSLSLVKTTAAKPRRRITLDEILKSIPEGAEMEKIEWGVDRGAEVW
Ga0311361_115203501	3300029911	Bog	MTTRIVRVGNTLTVEIPEELVARAGLPVGEPLEWIVDGVGSISLVRTSELGSANRRDRMTLEELLEGLPDNAELGEY
Ga0311362_103591313	3300029913	Bog	MTTQIIRVGNTLTVEIPEELAAQAELAPGEPVEWVLHGSGSIALVRQSNPPAKPRKRKTLEELLEG
Ga0311362_106904171	3300029913	Bog	MIAVGANPMTTRIVREGSTLTVEIPEELALQAEIAPGEPVEWVPNGSGSIALVKQSNPPAKLRKRKTLEELLEGIPEDAEMEKVNWGPDRGAEV
Ga0311358_104401451	3300029915	Bog	EIPEELVAQAALPVGEPVEWVSSGNGSITLITQSTSTRPRKRKTLEELLEGIPEGTRIPEYDWGPPCGVEVW
Ga0302148_10316362	3300029916	Bog	MTTRIVRVGNTLMVEIPEELVTEASLPVGEPLQWVPNGSGSIVLVKSSEPVSATARKRMTLDEILEGIPEN
Ga0311326_100721172	3300029917	Bog	RVGNTLMVEIPEELVTEASLPVGEPLQWVPNGSGSIALVKSSDAVTANPRKRLTLDEILEGMPENAPMEEIDWGPPRGAEIW
Ga0311363_114996561	3300029922	Fen	IIRVGNSLLVEIPEELVTQSGLQVGEPLEWVANGSGSISLVGPPRRSVPKKPADMTLEELLEEIPEGAEMERIDWGPDRGAEVW
Ga0311346_103219261	3300029952	Bog	MTPRIVRVGNSLLVEIPEELVTQSGLQVGEPLEWVANGSGSISLVGPPRRSVPKKPADMTLEELLEGIPEGAEMERIDWGPDRGAEVW
Ga0311346_113413911	3300029952	Bog	MTTQIVRVGNTLTVEIPEELVAQAGLPVGELLEWVATGVGSLALVSLSKPPTRKNPADMTLEELLEGIPESAEMEKIDWGLT
Ga0311343_104856381	3300029953	Bog	TQIIRVGNTLTVEIPEHLVAQASLPVGEPVEWVANEFGSLSLVKTTAAKPRRRITLDEILKSIPEGAEMEKIEWGVDRGAEVW
Ga0311343_109935412	3300029953	Bog	NTLTVAIPEELVAQAELPVGEPLEWIVDGAGSISLMKASEPGSTKPRNRMTLEELLEGLPENAELGEIDWGPPQGAEVW
Ga0302276_103876222	3300029992	Bog	IPEELVTEASLPVGEPLQWVPNGSGSIALVKSSDAVTANPRKRLTLDEILEGMPENAPMEEIDWGPPRGAEIW
Ga0311338_101986081	3300030007	Palsa	MTTRIVRVGSTLSVEIPEELVAQAALPVGEPVEWVSNGSGGIALVKSAGKSPANHPTRMTLEELMEG
Ga0302177_105691721	3300030053	Palsa	MTTRIVRVGSTLSVEIPEELVAQAALPVGEPVEWVSNGSGGIALVKSAGKSPANHPTRMTLEELME
Ga0302177_106639812	3300030053	Palsa	MTTRIVRVGSTLTVEIPEELVVQAALPVGEPVEWVPNASGGIALVRQADAVLASPRKRMTLDELLKGIPEEAAMEEIDWGPPR
Ga0311370_108826991	3300030503	Palsa	LTVEIPEELVVQAALPVGEPVEWVPNASGGIALVRQADAVLASPRKRMTLDELLKGIPEEAAMEEIDWGPPRGVEVW
Ga0302194_102895061	3300030506	Bog	EPLQWVPNGSGSIVLVKSSEPVSATARKRMTLDEILEGIPENASMEDVDWGPPRGAEIW
Ga0311372_112274183	3300030520	Palsa	MTTRIVRVGNTLTVEIPEELVAQAELPVGEPVEWVANGAGSISLVKTSEPGSSAARKRMTLEELLEGIPDNADMEEID
Ga0311356_109981533	3300030617	Palsa	TLTVEIPEELVSQASLPVGEPVEWVPNGFGSLALVKTTAAKPHRRITLDEILESIPEGAEMEKIEWGADRGTEVW
Ga0302308_103408632	3300031027	Palsa	MTTQIVRVGNTLTVEIPEELVAQASLPVGEPVEWVASGSGSITLVKKSELDSAIPRKRITLEELLEGIPDGASMEEIDWGPPRGAEI
Ga0302187_102705141	3300031259	Bog	MTTRIVRVGNTLTVEIPEALVAQASLPVGEPVEWVSNPSGGIALVRPAGQSPALPHKRMTLDE
Ga0302320_102461414	3300031524	Bog	MTTRIVRIGNTLMVEIPEELAAQALLPVGEAVEWVSNGSGSIALVKQLDGLSSNPRKRKSLDKILEGIPQGASMPESDWGSPRGVEFW
Ga0302320_109251962	3300031524	Bog	MTTQIVRVGNTLTVEIPEELVAQAGLPVGELLEWVATGVGSLALVSLSKPPTRKNPADMTLEELLEGIPESAEMEKIDWGLTGELRFREPLHAHKC
Ga0302320_113553632	3300031524	Bog	MSTQIVRVGNTLTVEIPEKLVAQAALAVGEPLEWVANGTGSIALVSSSKLSAPRKNPADMTLEELMEGIPEGAEMEKIDWGPDRGAEVW
Ga0302326_133658632	3300031525	Palsa	MTIRIVRVGSTLTVEIPEELVVQAALPVGEPVEWVPNASGGIALVRQADAVLASPRKRMTLDELLKGIPEEAAME
Ga0310686_1181951833	3300031708	Soil	MTTQIVRVGNTLTVETPEELAAQAKLAPGEPVEWVANGSGSIALVKQSNSPAKMRKRKTLEELLDGIPEGAEMEKIEWGPDRGAEVW
Ga0302319_108763362	3300031788	Bog	MTTRIVRVGNTLTVEIPEELVAQAELPVGEPLEWIADGAGSISLVKTSESGSAAPRKRMTLEELLEGLPDNADMEEIDWGPPRGAEV
Ga0302319_117296562	3300031788	Bog	MTTQIVRVGNTLTVEIPEELVAQAALPVGEPVEWVANGAGSIALVKQSDGAAKPRKRKTLDEILEGIPDGAEMEKIDWGPDRGA
Ga0348332_140009972	3300032515	Plant Litter	TTQIVRVGNTLTVEIPEELAAQAKLAPGEPVEWVANGSGSIALVKQSNSPAKMRKRKTLEELLDGIPEGSEMEKIEWGPDRGAEVW
Ga0316226_13365341	3300032562	Freshwater	EELVAQASLPVGEPVEWVATGSGGIALVKKSDVASANPRKRKTLEEILEGIPEGAVMEEIDWGPPRGAEFW
Ga0316221_12338901	3300032665	Freshwater	MTTRIVRVGNTLTVEIPEELVAQASLPVGEPVEWVATGSGGIALVKKSDVASANPRKRKTLEEILEGIPEGVVMEEIDWGP
Ga0316229_11819501	3300032676	Freshwater	MTTRIVRVGNTLTVEIPEELVAQASLPVGEPVEWVATGSGGIALVKKSDVASANPRKRKTLE
Ga0326728_100027967	3300033402	Peat Soil	VGVGPLTTQIVRLGNTLTVEIPEELVTQAALPVGEPLEWVSNGSGSIALVKPSTLVSQRKRKTLEELLEGIPEGTCIPEYDWGPPRGVEVW
Ga0326728_106315012	3300033402	Peat Soil	MTTRIVRVGNTLTVEIPEELAAQAELAPGEPVEWVPNGSGSIALVKHSDSLSAKPRRRITLDEILEGIPEGAEMEKIEWGPDRGAEIW
Ga0326727_100252097	3300033405	Peat Soil	MTTRIVRVGNTLTVEIPEELLAQASLPVGEPLEWVANGSGGISLVKSSDSAPATPRKRKTLEEILEGIPEGTCIPEYDWGSPHGVEFW
Ga0326727_101056772	3300033405	Peat Soil	MTTRIVRVGNTLTVEIPEQLAAAAALPVGEPMEWVANGVGSIALVKQSDIASANPRKRKTLDEILEGIPEGASIPEFDWGAARGVEFW
Ga0326727_101206071	3300033405	Peat Soil	MTTQIVRVGNTLTVEIPEELAAQAELAPGQQVEWVPNGTGSIALVRQSNPPARTRKRKTLEELLEGIPEDAEMEKIEWGPDRGAEVW
Ga0371489_0092512_1584_1793	3300033755	Peat Soil	MTTRIVRVGNTLTVEIPEELVAQAALPVGEPVEWVSNGNGSITLVKQSTSTQLRKRKTLEELLEGIPEGT
Ga0334827_055080_1001_1267	3300034065	Soil	MTTQIVRVGNTLTVEIPEELVAQAELPVGEPVEWVANGNGSLALVSTSKSLNPKNPADMTIEELLDGIPEGAEMEKIDWGPDRGAEVW
Ga0370492_0001281_2230_2493	3300034282	Untreated Peat Soil	MTTRIVRVGNILTVEIPEELVAQASLPVDEPVEWIANGAGSLALVTKTAAATKPRRPITLDEILQSIPEGAAMEKIDWGPDRGAEVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079469

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences