Metagenome Family F079357

Basic Information
Family ID	F079357
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	69 residues
Representative Sequence	LDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Number of Associated Samples	105
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.45 %
% of genes near scaffold ends (potentially truncated)	95.69 %
% of genes from short scaffolds (< 2000 bps)	90.52 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (99.138 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (7.759 % of family members)
Environment Ontology (ENVO)	Unclassified (21.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.207 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 53.03% Coil/Unstructured: 46.97%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00496	SBP_bac_5	64.66
PF07883	Cupin_2	1.72
PF12697	Abhydrolase_6	1.72
PF13378	MR_MLE_C	1.72
PF00528	BPD_transp_1	1.72
PF12911	OppC_N	0.86
PF02746	MR_MLE_N	0.86
PF01379	Porphobil_deam	0.86
PF01411	tRNA-synt_2c	0.86
PF04055	Radical_SAM	0.86
PF10518	TAT_signal	0.86
PF00005	ABC_tran	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.72
COG0013	Alanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.86
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.03 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %
Unclassified	root	N/A	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100434670	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300000955\|JGI1027J12803_104067794	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300001431\|F14TB_100581760	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300004157\|Ga0062590_102883920	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005178\|Ga0066688_10052598	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300005332\|Ga0066388_107979579	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005353\|Ga0070669_101858139	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005406\|Ga0070703_10429287	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005441\|Ga0070700_100508292	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005446\|Ga0066686_10993211	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005467\|Ga0070706_100073558	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300005468\|Ga0070707_100097680	All Organisms → cellular organisms → Bacteria → Proteobacteria	2845	Open in IMG/M
3300005507\|Ga0074259_10685694	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005518\|Ga0070699_100810926	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005518\|Ga0070699_101577626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300005529\|Ga0070741_10981448	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005540\|Ga0066697_10151784	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300005544\|Ga0070686_101932501	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005569\|Ga0066705_10877072	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005569\|Ga0066705_10969731	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005577\|Ga0068857_101927107	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005713\|Ga0066905_102170599	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005764\|Ga0066903_107784622	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005844\|Ga0068862_100880888	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300006049\|Ga0075417_10737559	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006797\|Ga0066659_10303240	Not Available	1220	Open in IMG/M
3300006845\|Ga0075421_100567505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1339	Open in IMG/M
3300006845\|Ga0075421_101582238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300006871\|Ga0075434_101875584	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006903\|Ga0075426_10071007	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300006918\|Ga0079216_11582292	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300009012\|Ga0066710_102504012	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300009038\|Ga0099829_10705618	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300009081\|Ga0105098_10823231	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009088\|Ga0099830_11840264	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009089\|Ga0099828_11940433	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300009094\|Ga0111539_10593235	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300009137\|Ga0066709_100195980	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300009137\|Ga0066709_104605602	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009162\|Ga0075423_13099553	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009162\|Ga0075423_13169832	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009168\|Ga0105104_10926247	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009444\|Ga0114945_10963230	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009812\|Ga0105067_1049333	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300009815\|Ga0105070_1025958	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300009820\|Ga0105085_1096630	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009822\|Ga0105066_1010589	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300009836\|Ga0105068_1090099	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010046\|Ga0126384_10470278	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300010046\|Ga0126384_11710653	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010047\|Ga0126382_10612305	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300010303\|Ga0134082_10077760	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300010333\|Ga0134080_10564778	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010358\|Ga0126370_12651708	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010359\|Ga0126376_12399582	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010362\|Ga0126377_10873625	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300010366\|Ga0126379_11054990	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300010398\|Ga0126383_11282700	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300010400\|Ga0134122_11819924	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012189\|Ga0137388_11183928	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012206\|Ga0137380_11735312	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012685\|Ga0137397_10697148	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012929\|Ga0137404_11482566	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012971\|Ga0126369_10645866	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300014884\|Ga0180104_1112986	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300015374\|Ga0132255_100140725	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300016387\|Ga0182040_10763404	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300017944\|Ga0187786_10074696	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300018482\|Ga0066669_10323710	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300021073\|Ga0210378_10216229	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300024347\|Ga0179591_1084190	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300025901\|Ga0207688_10693037	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300025922\|Ga0207646_10143877	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300025927\|Ga0207687_11505576	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300025935\|Ga0207709_10452689	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300025972\|Ga0207668_10317279	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300026116\|Ga0207674_11607301	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026325\|Ga0209152_10257213	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300026334\|Ga0209377_1235858	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300026499\|Ga0257181_1102332	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300027646\|Ga0209466_1001987	All Organisms → cellular organisms → Bacteria → Proteobacteria	4159	Open in IMG/M
3300027961\|Ga0209853_1022655	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300028380\|Ga0268265_10861532	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300028705\|Ga0307276_10188993	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300028792\|Ga0307504_10171772	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300028814\|Ga0307302_10313688	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300028828\|Ga0307312_10947378	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031170\|Ga0307498_10371129	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031226\|Ga0307497_10510460	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031562\|Ga0310886_10977350	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031740\|Ga0307468_100083388	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300031747\|Ga0318502_10352231	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031770\|Ga0318521_10191260	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300031820\|Ga0307473_10961590	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031820\|Ga0307473_11379180	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031847\|Ga0310907_10062399	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300031854\|Ga0310904_11206543	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031860\|Ga0318495_10222639	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031908\|Ga0310900_10440735	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300032003\|Ga0310897_10167876	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300032003\|Ga0310897_10582081	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300032009\|Ga0318563_10553052	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300032013\|Ga0310906_10563045	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300032041\|Ga0318549_10230871	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300032055\|Ga0318575_10253786	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300032068\|Ga0318553_10292409	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300032076\|Ga0306924_10052581	All Organisms → cellular organisms → Bacteria → Proteobacteria	4500	Open in IMG/M
3300032090\|Ga0318518_10714319	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300032174\|Ga0307470_10438798	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300032180\|Ga0307471_101149007	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300032180\|Ga0307471_101666185	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300032180\|Ga0307471_102444278	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032180\|Ga0307471_103507977	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300032782\|Ga0335082_11011428	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300033158\|Ga0335077_10001931	All Organisms → cellular organisms → Bacteria	24724	Open in IMG/M
3300034176\|Ga0364931_0089889	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.62%
Host-Associated	Host-Associated	16.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.31%
Plants	Host-Associated → Plants	16.38%
Aquatic	Environmental → Aquatic	4.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.03%
Freshwater	Environmental → Aquatic → Freshwater	2.59%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.62%
Loam	Environmental → Terrestrial → Soil → Loam	12.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.62%
Sand	Environmental → Terrestrial → Soil → Sand	5.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.03%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.17%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.86%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1004346701	3300000559	Soil	HTHYLDYTTVVVEGDLVERPNADGTVDRIEVQPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
JGI1027J12803_1040677941	3300000955	Soil	VEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
F14TB_1005817601	3300001431	Soil	DYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0062590_1028839202	3300004157	Soil	DYTTVVVEGDLVERPNGDGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR*
Ga0066688_100525983	3300005178	Soil	HYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0066388_1079795791	3300005332	Tropical Forest Soil	LDYTSIVVEGDVVERPNADGSVDRIEVTPGQIMRWNQGTLRHALRNIGAKRFRNVIIEVKGRHTGA*
Ga0070669_1018581391	3300005353	Switchgrass Rhizosphere	IDLAPGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
Ga0070703_104292871	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	WGLGGHIGAPMFIVERPNGDGSVDRIEVTPGQIMRWNQGTLRHALRNIGTKRFRNVIVEVKGRRTGA*
Ga0070700_1005082921	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	HLDYTSIVVEGDVVERPNADGSVDRIEVAPGQIMRWNQGTLRHALRNIGTKHFRNVIIEVKGRQTGA*
Ga0066686_109932111	3300005446	Soil	VERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0070706_1000735581	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEGDVVERPNADGSVDRIEVTPGQIMRWNQGTLRHALRNIGTKRFRNVIVEVKGRRTGV*
Ga0070707_1000976803	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFIVERPNGDGSVDRIEVTPGQIMRWNQGTLRHALRNIGTKRFRNVIVEVKGRRTGV*
Ga0074259_106856942	3300005507	Arabidopsis Rhizosphere	THYLDYTTVVVEGELVERPNADGTVDRIEVKPGAIMRWNQGDLAAALRNIGTKTFRNVIVEVKGRKTGA*
Ga0070699_1008109261	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MFIVERPNGDGSVDRIEVTPGQIMRWNQGTLRHALRNIGTKRFRNVIVEVKGRRTGA*
Ga0070699_1015776262	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0070741_109814481	3300005529	Surface Soil	HYLDYTTVTLEGDVVERANADGTVDRIEVRPGRVMRWYQSTRTHGLRNVGTRRFRNVIVEIKGAQADFDAAKGAHGR*
Ga0066697_101517842	3300005540	Soil	GWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0070686_1019325011	3300005544	Switchgrass Rhizosphere	VERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
Ga0066705_108770722	3300005569	Soil	QVRIWRIELEPGEEAAFHTHYLDYTSIIVEGDVVERCNADGTRERLEVHPGAITRWYQSTQRHGLKNSGTQRFRNVIVEVKQLPADFAGRPTEG*
Ga0066705_109697311	3300005569	Soil	WHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0068857_1019271072	3300005577	Corn Rhizosphere	HHLDYTSVVVEGDVVERPNGDGTVDRIEVTPGTIMRWNQGSLRHALRNIGTKRFRNVIVEVKGRQTGA*
Ga0066905_1021705991	3300005713	Tropical Forest Soil	VERPNADGSVDRIEVKPGAIMRWNQGTLRHALKNIGTKTFRNVIVEVKGRRTGA*
Ga0066903_1077846221	3300005764	Tropical Forest Soil	VERPNADGTVDRIEVTPGAIMRWNQGTLRHALKNVGTKTFRNVIVELKGRRIGA*
Ga0068862_1008808882	3300005844	Switchgrass Rhizosphere	HYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR*
Ga0075417_107375591	3300006049	Populus Rhizosphere	YLDYTTVVVEGDMVERPNADGTVDRIEVKPGAIMRWQQGTLRHALKNVGTKTFRNVIVEVKGRRTGA*
Ga0066659_103032402	3300006797	Soil	IELEPGEEAAFHTHYLDYTSIIVEGDVVERCNVDGTRDRLEVHPGAITRWYQSTQRHGLKNSGTQRFRNVIVEVKQLPADFAGRPTKG*
Ga0075421_1005675052	3300006845	Populus Rhizosphere	GFHTHILDYTTVVVDGDMVERPNADGSVDSIPVKPGQLMRWYDGPLGHSLKNSGTKPFRNVIVEIKGLVADPEKAAGK*
Ga0075421_1015822382	3300006845	Populus Rhizosphere	APGQEAGFHTHILDYTTVVVDGDMVERPNADGSVDSIPVKPGQLMRWYDGPLGHSLKNSGTKPFRNVIVEIKGLVADPEKAAGN*
Ga0075434_1018755841	3300006871	Populus Rhizosphere	LDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
Ga0075426_100710071	3300006903	Populus Rhizosphere	YLDYTTVVVEGDLVERPNADGTVDQIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRRTGA*
Ga0079216_115822921	3300006918	Agricultural Soil	THELDYTTVVIDGDMVERPNADGTVDSIPVKPGQLMRWYDGPLGHSLKNSGAKPFRNVIVEIKGLPADFEARAGEQ*
Ga0066710_1025040121	3300009012	Grasslands Soil	LDYTTVVVEGDVVERPNADGSVDRIEVKPGAIMRWNQGTLRHALKNVGTKTFRNVIVEVKGRRTGA
Ga0099829_107056181	3300009038	Vadose Zone Soil	IELAPGEMAGWHTHYLDYTTVVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0105098_108232311	3300009081	Freshwater Sediment	DYTSIVIEGDVVERPNGDGTVDRIEVTPGTIMRWHQGTLRHALQNVGTKRFRNVIVEVKGRQTGAREERP*
Ga0099830_118402642	3300009088	Vadose Zone Soil	VVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0099828_119404331	3300009089	Vadose Zone Soil	YLDYTTVVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0111539_105932351	3300009094	Populus Rhizosphere	VVVEGDVVERPNGDGTVDRIEVTPGTIMRWNQGSLRHALRNIGTKRFRNVIVEVKGRQTGA*
Ga0066709_1001959801	3300009137	Grasslands Soil	HYLDYTTVVVEGDLVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNIGSKTFRNVIVEVKGRRTGAREAPAGA*
Ga0066709_1046056022	3300009137	Grasslands Soil	APGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0075423_130995531	3300009162	Populus Rhizosphere	ETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
Ga0075423_131698321	3300009162	Populus Rhizosphere	HTHHLDYTSIVVEGDVVERPNADGSADRIEVTPGQIMRWNQGTLRHALRNIGAKRFRNVIIEVKGRHTGA*
Ga0105104_109262472	3300009168	Freshwater Sediment	ELAPGETAGWHTHYLDYTTVVVDGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
Ga0114945_109632302	3300009444	Thermal Springs	LEPGQEARWHTHYLDYTSIVIEGDVVERPNADGTVDRIEVTPGNFMRWHQGTLRHALRNVGTKRFRNVIVEIKNTSTGA*
Ga0105067_10493332	3300009812	Groundwater Sand	YLDYTSIVVEGDVVERPNGDGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0105070_10259581	3300009815	Groundwater Sand	HTHYLDYTTVVVEGDVVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0105085_10966301	3300009820	Groundwater Sand	DVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0105066_10105892	3300009822	Groundwater Sand	DVVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRQTGA*
Ga0105068_10900991	3300009836	Groundwater Sand	VVVEGDVVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0126384_104702782	3300010046	Tropical Forest Soil	EGDVVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0126384_117106532	3300010046	Tropical Forest Soil	WHTHHLDYTSIVIEGDVVERPNGDGSVDRIEVSPGTIMRWHQGTLRHALQNVGTKRFRNVIVEVKGRQTGA*
Ga0126382_106123051	3300010047	Tropical Forest Soil	TVVVEGDVVERPNADGSVDRIEVKPGAIMRWNQGTLRHALKNIGTKTFRNVIVEVKGRRTGA*
Ga0134082_100777602	3300010303	Grasslands Soil	WRIELAPGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNIGSKTFRNVIVEVKGRRTGAREAPAGA*
Ga0134080_105647782	3300010333	Grasslands Soil	IELAPGETAGWHTHYLDYTTVVVEGDVVERPNADGSVDRIEVKPGAIMRWNQGTLRHALKNVGTKTFRNVIVEVKGRRTGA*
Ga0126370_126517081	3300010358	Tropical Forest Soil	GETAGWHTHYLDYTTVVVEGDLVERPNDDGSVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRRTGA*
Ga0126376_123995821	3300010359	Tropical Forest Soil	EVAGWHTHYLDYTTVVVEGDMVERPNADGTVDRIEVKPGAIMRWNQGTLRHALKNIGTKTFRNVIVEIKGRRTGA*
Ga0126377_108736252	3300010362	Tropical Forest Soil	HTHYLDYTTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRKTGA*
Ga0126379_110549902	3300010366	Tropical Forest Soil	GETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRRTGA*
Ga0126383_112827002	3300010398	Tropical Forest Soil	DLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRRTGA*
Ga0134122_118199241	3300010400	Terrestrial Soil	YLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA*
Ga0137388_111839281	3300012189	Vadose Zone Soil	MVDEAAPEGESDRTELVFEDDSVRLWRIDLAPREKAGWHTHRLDYTSIVIEGDVVERPNGDGTVDRIEVTPGTIMRWNQGTLRHALRNIGAKRFRNVIVE
Ga0137380_117353122	3300012206	Vadose Zone Soil	VVERPNADGTVDRIEVKPGQLMRWYQGPLRHVLRNVGTKTFRNVIVELKNSSTGA*
Ga0137397_106971482	3300012685	Vadose Zone Soil	LAPGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRRTGAGEESR*
Ga0137404_114825661	3300012929	Vadose Zone Soil	LDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA*
Ga0126369_106458661	3300012971	Tropical Forest Soil	DSVRVWRIELRPGEMAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRRTGA*
Ga0180104_11129861	3300014884	Soil	YLDYTSVVIEGDVVERPNGDGTVDRIEVTPGTIMRWNQGTLRHALRNIWTKRFRNVIVEVKGRQTGA*
Ga0132255_1001407251	3300015374	Arabidopsis Rhizosphere	PGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRKTGA*
Ga0182040_107634041	3300016387	Soil	LDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALKNIGTKTFRNVIVEVKGRRTGA
Ga0187786_100746962	3300017944	Tropical Peatland	VEGDLVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0066669_103237102	3300018482	Grasslands Soil	WRIELEPGEEAAFHTHYLDYTSIIVEGDVVERCNADGTRERLEVHPGAITRWYQSTQRHGLKNSGTQRFRNVIVEVKQLPADFAGRPTEG
Ga0210378_102162291	3300021073	Groundwater Sediment	PGEMAGWHTHYLDYTTVVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0179591_10841903	3300024347	Vadose Zone Soil	HHGRRRGDVVERPNADGSVDRIEVKPGAIMRWNQGTLRHALKNVGTKTFRNVIVEVKGRRTGA
Ga0207688_106930371	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRVWRIELAPGEVAGWHTHYLDYTTVVVEGDMVERPNADGTVDRIEVKPGAIMRWQQGTLRHALKNVGTKT
Ga0207646_101438773	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFIVERPNGDGSVDRIEVTPGQIMRWNQGTLRHALRNIGTKRFRNVIVEVKGRRTGA
Ga0207687_115055761	3300025927	Miscanthus Rhizosphere	IVGLLAPGETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR
Ga0207709_104526892	3300025935	Miscanthus Rhizosphere	TAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0207668_103172792	3300025972	Switchgrass Rhizosphere	YTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR
Ga0207674_116073012	3300026116	Corn Rhizosphere	AGWHTHHLDYTSVVVEGDVVERPNGDGTVDRIEVTPGTIMRWNQGSLRHALRNIGTKRFRNVIVEVKGRQTGA
Ga0209152_102572131	3300026325	Soil	GDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0209377_12358581	3300026334	Soil	GETAGWHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0257181_11023322	3300026499	Soil	DYTTVVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0209466_10019873	3300027646	Tropical Forest Soil	VVERPNGDGSVDRIEVKPGAIMRWNQGTLRHALKNIGTKTFRNVIVEVKGRRTGA
Ga0209853_10226551	3300027961	Groundwater Sand	EGDVVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0268265_108615321	3300028380	Switchgrass Rhizosphere	HYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR
Ga0307276_101889932	3300028705	Soil	HELDYTTIVVDGDVVERPNDDGTVDRITVAPGQIMRWYDGTQRHALKNAGTRPFRNVIVEVKSLPADFESRA
Ga0307504_101717722	3300028792	Soil	TVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0307302_103136882	3300028814	Soil	SIVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0307312_109473781	3300028828	Soil	SIVVEGDVVERSNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0307498_103711292	3300031170	Soil	WHTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0307497_105104602	3300031226	Soil	HTHYLDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR
Ga0310886_109773502	3300031562	Soil	TTVVVDGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0307468_1000833881	3300031740	Hardwood Forest Soil	DYTTVVVEGDMVERPNADGTVDRIEVKPGAIMRWQQGTLRHALKNVGTKTFRNVIVEVKGRRTGA
Ga0318502_103522312	3300031747	Soil	HTHYLDYMTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0318521_101912602	3300031770	Soil	DYTTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0307473_109615902	3300031820	Hardwood Forest Soil	EGDVVERPNADGTVDRIEVKPGAIMRWNQGTLRHALKNVGTKTFRNVIVEVKGRRTGA
Ga0307473_113791802	3300031820	Hardwood Forest Soil	ELAPGEVAGWHTHYLDYTTVVVEGDVVERPNADGTVDRIEVKPGAIMRWQQGTLRHALKNVGTKTFRNVIVEVKGRRTGA
Ga0310907_100623991	3300031847	Soil	IELAPGETAGWHTHYLDYTTVVVDGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0310904_112065432	3300031854	Soil	ERPNGDGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR
Ga0318495_102226392	3300031860	Soil	DLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0310900_104407352	3300031908	Soil	VERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0310897_101678762	3300032003	Soil	VVDGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0310897_105820812	3300032003	Soil	RPNGDGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRTTGAREETR
Ga0318563_105530522	3300032009	Soil	RIELAPGETAGWHTHYLDYTTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0310906_105630451	3300032013	Soil	LDYTTVVVDGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0318549_102308712	3300032041	Soil	THYLDYTTVVVEGDLVERPNADGSVDRIEVKPGATMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0318575_102537862	3300032055	Soil	HYLDYMTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0318553_102924092	3300032068	Soil	LDYMTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0306924_100525815	3300032076	Soil	THYLDYMTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0318518_107143191	3300032090	Soil	MTVVVEGDLVERPNADGSVDRIEVKPGAIMRWNQGTLRHALRNIGTRTFRNVIVEVKGRRTGA
Ga0307470_104387982	3300032174	Hardwood Forest Soil	DLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNIGTKTFRNVIVEVKGRQTGA
Ga0307471_1011490071	3300032180	Hardwood Forest Soil	DLVPGEKAGWHTHYLDYTSVVIEGDVVERPNGDGTVDRIEVTPGTIMRWNQGTLRHALRNIGTKRFRNVIVEVKGRQTGA
Ga0307471_1016661851	3300032180	Hardwood Forest Soil	VEGDVVESPNADGTVDRIEVKPGAIMRWNQGTLRHALKNVGTKTFRNVIVEVKGRRTGA
Ga0307471_1024442781	3300032180	Hardwood Forest Soil	VVVEGDVVERPNADGSVDRIEVKPGAIMRWNQGTLRHALKNVGTKTFRNVIVEVKGRRTG
Ga0307471_1035079772	3300032180	Hardwood Forest Soil	LDYTTVVVEGDLVERPNADGTVDRIEVKPGAIMRWNQGTLRHALRNVGTKTFRNVIVEVKGRRTGA
Ga0335082_110114281	3300032782	Soil	DYTTVVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGSLRHALKNVGTKTFRNVIVELKGRRIGA
Ga0335077_100019311	3300033158	Soil	EGDVVERPNDDGTVDRIEVTPGAIMRWNQGSLRHALKNVGTKTFRNVIVELKGRRIGA
Ga0364931_0089889_759_962	3300034176	Sediment	YLDYTSIVVEGDVVERPNADGTVDRIEVTPGAIMRWNQGTLRHALRNVGTRPFRNVIVEVKGRRTGA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079357

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign