Metagenome Family F079331

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079331
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	64 residues
Representative Sequence	VKIAEAKRLAFGSTPAASLEEYHSAWQWLYDNDVELKQPDIDYLDKLICDGNVIPREDYFSTIDT
Number of Associated Samples	41
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	23.28 %
% of genes from short scaffolds (< 2000 bps)	87.93 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (52.586 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (45.690 % of family members)
Environment Ontology (ENVO)	Unclassified (97.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.793 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1GS313G0146KB_00114600 2JGI24006J15134_100430453 3JGI24006J15134_100510054 4JGI24006J15134_100539244 5JGI24006J15134_100580233 6JGI24006J15134_100621392 7JGI24006J15134_100721783 8JGI24006J15134_100852151 9JGI24006J15134_100909123 10JGI24006J15134_101243603 11JGI24006J15134_101308263 12JGI24006J15134_101338843 13JGI24003J15210_100106353 14Ga0073579_11839369 15Ga0073579_16708624 16Ga0098048_10303773 17Ga0098048_10947322 18Ga0098048_11628422 19Ga0098048_12340412 20Ga0098054_13429822 21Ga0098055_11578323 22Ga0098055_12210182 23Ga0098060_10777782 24Ga0098060_11218602 25Ga0098060_11972472 26Ga0098050_11407013 27Ga0105744_11033732 28Ga0181412_10116871 29Ga0181381_10135212 30Ga0181381_10458972 31Ga0181381_10672512 32Ga0181381_10854632 33Ga0181401_10679152 34Ga0181401_10915862 35Ga0181419_10138207 36Ga0181416_11696741 37Ga0187222_10326301 38Ga0187222_11191971 39Ga0187222_11243972 40Ga0181421_10967931 41Ga0181421_11182501 42Ga0181421_11649801 43Ga0181397_11965612 44Ga0181392_10081215 45Ga0181392_10141174 46Ga0181392_10227213 47Ga0181392_10269143 48Ga0181392_10822072 49Ga0181392_10914753 50Ga0181405_10932932 51Ga0181400_10557143 52Ga0181411_11399862 53Ga0181420_11037431 54Ga0181422_10449483 55Ga0181422_10619082 56Ga0181422_10629122 57Ga0181422_11104141 58Ga0181422_11483512 59Ga0181422_12230802 60Ga0181385_11195721 61Ga0181413_10836031 62Ga0181413_12072942 63Ga0187217_10257481 64Ga0187217_10508743 65Ga0187217_11272682 66Ga0187217_11424053 67Ga0187217_12308522 68Ga0181425_10313094 69Ga0181430_12064983 70Ga0181423_10935523 71Ga0181423_11377963 72Ga0181380_11186692 73Ga0181379_10459843 74Ga0181379_10634263 75Ga0181379_10900812 76Ga0181379_11483762 77Ga0181379_11505723 78Ga0181379_11905383 79Ga0181379_12560193 80Ga0181424_101119473 81Ga0211545_100106614 82Ga0233438_100134246 83Ga0233438_100766912 84Ga0233438_100861623 85Ga0233438_101016682 86Ga0233438_101144013 87Ga0233438_101391053 88Ga0233438_101512753 89Ga0233438_101784603 90Ga0233438_102497922 91Ga0208791_10388083 92Ga0208792_10506412 93Ga0208669_10484921 94Ga0209535_100096129 95Ga0209337_101262210 96Ga0209337_10529025 97Ga0209337_10543844 98Ga0209337_10734863 99Ga0209337_11080593 100Ga0209337_11142093 101Ga0209337_11149203 102Ga0209337_11182024 103Ga0209337_11272862 104Ga0209337_11411143 105Ga0209337_11476033 106Ga0209337_11488133 107Ga0209337_11621043 108Ga0209337_12244771 109Ga0209337_12432842 110Ga0209337_12794862 111Ga0209337_13018322 112Ga0209337_13457811 113Ga0315315_100987592 114Ga0315315_108405081 115Ga0315315_112322702 116Ga0315315_114496712
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1GS313G0146KB_00114600 2JGI24006J15134_100510054 3JGI24006J15134_100539244 4JGI24006J15134_100852151 5JGI24003J15210_100106353 6Ga0098060_11972472 7Ga0181381_10854632 8Ga0181423_10935523 9Ga0181379_12560193 10Ga0209337_13457811
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1Ga0181424_101119473 2GS313G0146KB_00114600 3JGI24006J15134_100510054 4JGI24006J15134_100621392 5JGI24006J15134_100852151 6JGI24006J15134_101243603 7Ga0073579_11839369 8Ga0098055_12210182 9Ga0098060_10777782 10Ga0098060_11972472 11Ga0105744_11033732 12Ga0181381_10854632 13Ga0181420_11037431 14Ga0181422_11483512 15Ga0181422_12230802 16Ga0187217_10508743 17Ga0187217_11272682 18Ga0187217_12308522 19Ga0181425_10313094 20Ga0233438_100766912 21Ga0233438_100861623 22Ga0233438_101391053 23Ga0233438_101512753 24Ga0208669_10484921
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.48% β-sheet: 0.00% Coil/Unstructured: 64.52%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.1.16: PBS lyase HEAT-like repeat	d1oyza_	1oyz	0.59865
a.102.4.2: Terpene synthases	d1w6ka2	1w6k	0.58033
a.118.1.1: Armadillo repeat	d1wa5c_	1wa5	0.56555
a.118.1.0: automated matches	d4xria_	4xri	0.56507
a.118.1.2: HEAT repeat	d1u6gc_	1u6g	0.56479

Showing 1 to 5 of 5 entries

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF14279	HNH_5	4.31
PF01844	HNH	3.45
PF00476	DNA_pol_A	1.72
PF00589	Phage_integrase	1.72
PF01764	Lipase_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	1.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	47.41 %
Unclassified	root	N/A	52.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	31.03 %
Unclassified	root	N/A	52.59 %
Viruses	superkingdom	All Organisms → Viruses	16.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.03 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.66 %
Unclassified	root	N/A	52.59 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.83 %
Unclassified	root	N/A	52.59 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.66 %
Unclassified	root	N/A	52.59 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.86 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.66 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	19.83 %
Unclassified	root	N/A	52.59 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.66 %
Unclassified	root	N/A	52.59 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	19.83 %

Name	Rank	Taxonomy	Distribution
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.66 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	19.83 %
Unclassified	root	N/A	52.59 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300024255\|Ga0233438_10013424	All Organisms → cellular organisms → Bacteria	5509	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10076691	Not Available	1594	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10086162	All Organisms → Viruses → Predicted Viral	1470	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10101668	All Organisms → Viruses → Predicted Viral	1311	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10114401	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10139105	Not Available	1055	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10151275	Not Available	996	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10178460	Not Available	889	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10249792	Not Available	702	Open in IMG/M
2189573028\|GS313G0146KB_1112118423987	Not Available	929	Open in IMG/M

Showing 1 to 10 of 116 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.86%
Inlet	Environmental → Aquatic → Marine → Inlet	7.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.31%
Oceanic	Environmental → Aquatic → Marine → Oceanic	40.52%
Strait	Environmental → Aquatic → Marine → Strait	45.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.86%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	45.69%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	40.52%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	38.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.86%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.86%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	45.69%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	7.76%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.45%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573028	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M

Showing 1 to 10 of 41 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GS313G0146KB_00114600	2189573028	Marine Estuarine	VTIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQEADMDYLDKLICDGNVVPREDYFSTIDT
JGI24006J15134_100430453	3300001450	Marine	VKVAEAKRIAFGSVPADSLEQWHSAWQWLYDNDVELKQPDIDYLDKLICDGNVVPREDYFSTIDT*
JGI24006J15134_100510054	3300001450	Marine	VNVKEAKRVAFGSTPCESLDEWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDT*
JGI24006J15134_100539244	3300001450	Marine	VNQAEAKRTAFGSTPSATLEEYYEAWQWLYDNDVELKQPDINYLDKLICDGNVIPKEDYFSTIDT*
JGI24006J15134_100580233	3300001450	Marine	VNQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVELKQPDIDYLDKLICDGNVVPKEDYFSTIDT*
JGI24006J15134_100621392	3300001450	Marine	MNVGEAKRIAFGSTPSASIEEYHSAWQWLYDNEVELKQSDIDYLDKLICDGNVIPRDDYFSTIDT*
JGI24006J15134_100721783	3300001450	Marine	VKIAEAKRIAFGSTPAASLKEWHDAWQWLYDNDVELKQPDIDYLDKLICDGDVLPRHDYFSTIDT*
JGI24006J15134_100852151	3300001450	Marine	STETQPRSRSMKIAEAKRIAFGSTPAASLEEWHTAWQWLYDNDVELKQPDIDYLDKLICDGDVLPKDDYFSTIDT*
JGI24006J15134_100909123	3300001450	Marine	VNQAEAKRTAFGSTPAATLEEYYEAWQWLYDHDVELKQPDINYLDKLICDGNVDPKEDYFSTIDT*
JGI24006J15134_101243603	3300001450	Marine	SGLVKIAEAKRIAFGSVPADSLEQWHGAWQWLYDNDVELKQPDIDYLDKLICDGNVVPREDYFSTIDT*
JGI24006J15134_101308263	3300001450	Marine	VTQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVEPKEDYFSTIDT*
JGI24006J15134_101338843	3300001450	Marine	MKIAEAKRLAFGSTPAASLEEYHSAWQWLYDNDVELKQPDIDYLDKLICDGDVLPKDDYFSTIDT*
JGI24003J15210_100106353	3300001460	Marine	VKVAEAKRIAFGSVSAKSIEEYFEAWQWLYDNEIDLKEPDINYLDKLICDGNVKPKDNYFSTIEA*
Ga0073579_11839369	3300005239	Marine	VNTKEAKRIAFGTTPSASLEEYHNAWQWLYDNEIDLQEADMNYLDKLICDGNVIPRSNYFSTIDT*
Ga0073579_16708624	3300005239	Marine	VNQAEAKRIAFGSTPSATLDEYYEAWQWLYDHNVDLKQPDINYLDKLICDGNVMPKENYFSTIDT*
Ga0098048_10303773	3300006752	Marine	VNVKEAKRIAFGSTPSQSLDEWHDAWQWLYDNYVELEQSDKDYLDKLICDGNVVPREDYFSTIDT*
Ga0098048_10947322	3300006752	Marine	VTIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQEADIDYLDKLICDGNVVPRDDYFSTIDT*
Ga0098048_11628422	3300006752	Marine	VNVKEAKRVAFGSTPCESLDQWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPREDYFSTIDT*
Ga0098048_12340412	3300006752	Marine	VNVKEAKRIAFGSTPCESLDQWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPREDYFSTIDT*
Ga0098054_13429822	3300006789	Marine	NVKEAKRVAFGSTPCESLDQWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVVPREDYFSTIDT*
Ga0098055_11578323	3300006793	Marine	VNVKEAKRVAFGSTPCESLDQWHSAWQWLYDNSIDLGQSDKDYLDKLICDGNVVPREDYFSTIDT*
Ga0098055_12210182	3300006793	Marine	VNVKEAKRIAFGSTPCESLEEWHNAWQWLYDNNIELQEGDRNYLDKLICDGSVEPKPDYFTTIDT*
Ga0098060_10777782	3300006921	Marine	VNVADAKRLAFGSVPSASLEEYHEAWQWLYDNDVELKEPDVNYLDKLICDGNVIPKSNYFSTIDT*
Ga0098060_11218602	3300006921	Marine	VNQAEAKRIAFGTTPSATLDEYFDAWQWLYDHDVDLKQPDINYLDKLICDGNVVPKEDYFSTIDT*
Ga0098060_11972472	3300006921	Marine	VNVKEAKTVAFGTSGADTLEEYFAAWQWLYDNDVELKDPDRDYLDKLICDGNVIPKDGYFDTMVK*
Ga0098050_11407013	3300006925	Marine	VNVKEAKRIAFGSTPSQSLDEWHDAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPR
Ga0105744_11033732	3300007863	Estuary Water	VNVKEAKRIAFGSTACNSLDEWHSAWQWLYDNDVELKQPDIDYLDKLICDGSVIPREDYFSTIDT*
Ga0181412_10116871	3300017714	Seawater	TKTIAFGTSGADTLDEYFAAWQWLYDNDVELKDPDRDYLDKLICDGNVIPKDGYFDTMVK
Ga0181381_10135212	3300017726	Seawater	VKIAEAKRIAFGSTPAESLEEYFSAWQWLYDNEVDLKQPDIDYLDKLICDGNVVPKDDYFSTIDT
Ga0181381_10458972	3300017726	Seawater	VNVKEAKRKAFGTTPCESLDEWHSAWQWLYDNYIDLEQADKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181381_10672512	3300017726	Seawater	VNVKEAKRKAFGTTPCESLDEWHSAWQWLYDNYVDLEQADKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181381_10854632	3300017726	Seawater	VNIASAKKIAFGSVPTETLEEYYQAWQWLYDNDIELRVDDIDYLDKLICDGCVNPKEGYFEQEIV
Ga0181401_10679152	3300017727	Seawater	VNVKKAKRIAFGSTPCESLDEWHGAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181401_10915862	3300017727	Seawater	VNIASAKRIAFGSVPTETLEEYYQAWQWLYDNDIELRVDDIDYLDKLICDGCVNPKEGYFEQEIV
Ga0181419_10138207	3300017728	Seawater	VKIAEAKRIAFGSTPSASIEEYHSAWQWLYDNEVELKEPDINYLDILICAGMVIPREDYFST
Ga0181416_11696741	3300017731	Seawater	VNVKEAKTIAFGTSGADTLDEYFAAWQWLYDNDVELKDPDRDYLDKLICDGNVIPKDGYFDTMV
Ga0187222_10326301	3300017734	Seawater	VNVKDAKCIAFGSTPCESLDEWHSAWQWLYDNYIELEQSDRDYLDKLICDGNVIPRDDYFSTI
Ga0187222_11191971	3300017734	Seawater	IKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQQADIDYLDKLICDGNVVPREDYFSTIDT
Ga0187222_11243972	3300017734	Seawater	VNVKEAKRKAFGTTPCESLDEWHSAWQWLYDNYVDLEQSDKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181421_10967931	3300017741	Seawater	VNVKEAKRKAFGTTPCESLDEWHSAWQWLYDNYVDLEQADKDYLDKLICDGNVIPRD
Ga0181421_11182501	3300017741	Seawater	EAKRIAFGSVSAKSIEEYFEAWQWLYDNEIELKEPDVNYLDKLICDGNVKPRDNYFSTID
Ga0181421_11649801	3300017741	Seawater	VKIAEAKRIAFGSTPAESLDEWHSAWQWLYDNDIELQEADKDYLDKLICDGNVKPKPDYFSTIDT
Ga0181397_11965612	3300017744	Seawater	AEAKRTAFGSTPSVTLEEYYEAWQWLYDHDVDLKQPDINYLDKLICDGNVIPKEDYFSTIDT
Ga0181392_10081215	3300017749	Seawater	VNVKEAKRIAFGSTPCKSLDEWHGAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDI
Ga0181392_10141174	3300017749	Seawater	VKIAEAKRIAFGSVPADSLEQWHSAWQWLYDNDIELKQPDIDYLDKLICDGNVIPREDYFSTIDT
Ga0181392_10227213	3300017749	Seawater	VNVKEAKRIAFGSTACNSLDEWHSAWQWLYDNYIELEQSDRDYLDKLICDGNVQPRDDYFSTIDT
Ga0181392_10269143	3300017749	Seawater	VKQAEAKRIAFGSTPSATLEEYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVEPKEDYFSTIDT
Ga0181392_10822072	3300017749	Seawater	VNVKEAKRIAFGTTSCASLDEWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181392_10914753	3300017749	Seawater	VTIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQEADMNYLDKLICDGNVVPREDYFSTIDT
Ga0181405_10932932	3300017750	Seawater	VNVKEAKRIAFGSTACNSLDEWHSAWQWLYDNYIELEQSDKDYLDKLICDGNVVPREDYFSTIDT
Ga0181400_10557143	3300017752	Seawater	VNQAEAKRIAFGSTPSATLEEYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVEPKEDYFSTIDT
Ga0181411_11399862	3300017755	Seawater	VNVKEAKRKAFGTTPCESLDEWHNAWQWLYDNYVDLEQADKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181420_11037431	3300017757	Seawater	VKIAEAKRIAFGSTPSASIEEYHSAWQWLYDNEVELKEPDINYLDKLICDGMVIPREDYFSTIDT
Ga0181422_10449483	3300017762	Seawater	VKIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQQADIDYLDKLICDGNVVPREDYFSTIDT
Ga0181422_10619082	3300017762	Seawater	VKIAEAKRIAFGSVPADSLEQWHSAWQWLYDNDVELKQPDIDYLDKLICDGNVIPRKDYFSTIDT
Ga0181422_10629122	3300017762	Seawater	VNVKEAKRIAFGSTPCKSLDEWHGAWQWLYDNYIELEQSDKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181422_11104141	3300017762	Seawater	KAFGTTPCESLDEWHSAWQWLYDNYVDLEQADKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181422_11483512	3300017762	Seawater	VNVKEAKRIAFGSTPSQSLDEWHGAWQWLYDNYVELEQSDKDYLDKLICDGNVVPRDDYFSTIDT
Ga0181422_12230802	3300017762	Seawater	VKIAEAKRIAFGSTPAESLEEYFSAWQWLYDNEVELKQPDIDYLDKLICDGNVVPKDDYFSTIDT
Ga0181385_11195721	3300017764	Seawater	VKIAEAKRIAFGSTPAESLDEWHSAWQWLYDNDIELQEADKDYLDKLICDGNVKPKPDYFSTID
Ga0181413_10836031	3300017765	Seawater	TQSRSWSVNVKEAKRKAFGTTPCESLDEWHSAWQWLYDNYVDLEQADKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181413_12072942	3300017765	Seawater	SRSVNVKEAKRKAFGTTPCESLDEWHSAWQWLYDNYVDLEQADKDYLDKLICDGNVIPRDDYFSTIDT
Ga0187217_10257481	3300017770	Seawater	SRSRSVNVKEAKRIAFGSTPCKSLDEWHGAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDI
Ga0187217_10508743	3300017770	Seawater	VNVKEAKRIAFGSTACNSLDEWHSAWQWLYDNYIELEQSDRDYLDKLICDGNVVPREDYFSTIDT
Ga0187217_11272682	3300017770	Seawater	VKVAEAKRIAFGSVSAKSIEEYFEAWQWLYDNEIELKEPDVNYLDKLICDGNVKPRDNYFSTIDT
Ga0187217_11424053	3300017770	Seawater	VTIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQEADINYLDKLICDGNVVPREDYFSTIDT
Ga0187217_12308522	3300017770	Seawater	VNQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVIPKEDYFSTIDT
Ga0181425_10313094	3300017771	Seawater	VNVAKAKRIAFGSSPAETLKEYYEAWQWLYDNNIELKEPDINYLDKLICDGNVEPRDNYFSTIDT
Ga0181430_12064983	3300017772	Seawater	VNVKEAKRIAFGSTPCESLDEWHNAWQWLYDNYVELEQADKDYLDKLICDGNVVPRDDYFSTID
Ga0181423_10935523	3300017781	Seawater	VKIAEAKRLAFGSTPAASLEEYHSAWQWLYDNDVELKQPDIDYLDKLICDGSVI
Ga0181423_11377963	3300017781	Seawater	VNVKEAKRIAFGSTACNSLDEWHSAWQWLYDNYVELEQSDRDYLDKLICDGNVQPRDDYFST
Ga0181380_11186692	3300017782	Seawater	VNVKDAKRIAFGSTPCASLDEWHSAWQWLYDNYVELEQSDKDYLDKLICDGNVIPREDYFSTIDT
Ga0181379_10459843	3300017783	Seawater	VNVKEAKRIAFGSTPCESLDEWHSAWQWLYDNYIDLDQSDKDYLDKLICDGNVIPREDYFSTIDT
Ga0181379_10634263	3300017783	Seawater	VNQAEAKRIAFGSTPSETLEEYYDAWQWLYDHDVDLKQPDIDYLDKLICDGNVKPKEDYFSTIDT
Ga0181379_10900812	3300017783	Seawater	VNQAEAKRIAFGSTPSETLEEYYNAWQWLYDHDVDLKQPDIDYLDKLICDGNVEPKEDYFSTIDT
Ga0181379_11483762	3300017783	Seawater	VNVKEAKRIAFGSTPCKSLDEWHGAWQWLYDNYVELEQSDKDYLDKLICDGNVIPREDYFSTIDT
Ga0181379_11505723	3300017783	Seawater	DACSKSSAKAQPRSGSVNVKEAKRIAFGSTPCGSLDEWHSAWQWLYDNYIELEQSDKDYLDKLICDGNVIPRDDYFSTIDT
Ga0181379_11905383	3300017783	Seawater	VNVKEAKRVAFGSTPCESLDEWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVVPRDDYFSTIDT
Ga0181379_12560193	3300017783	Seawater	VNVKEAKRIAFGSTPSQSLDEWHDAWQWLYDNYIELEQSDRDYLDKLICDGN
Ga0181424_101119473	3300017786	Seawater	VKIAEAKRLAFGSTPAASLEEYHSAWQWLYDNDVELKQPDIDYLDKLICDGNVIPREDYFSTIDT
Ga0211545_100106614	3300020452	Marine	VKVAEAKRIAFGSVSAKTIEEYFEAWQWLYDNDVELKEPDVNYLDKLICDGNVKPRDNYFSRIDT
(restricted) Ga0233438_100134246	3300024255	Seawater	VKIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDVELQQADINYLDKLICDGNVVPREDYFSTIDT
(restricted) Ga0233438_100766912	3300024255	Seawater	VKIAEAKRIAFGSTPAESLDKWHSAWQWLYDNDIELQEADKDYLDKLICDGNVIPREDYFSTIDT
(restricted) Ga0233438_100861623	3300024255	Seawater	VNVKEAKRKAFGTTPCKSLDEWHGAWQWLYDNYVDLEQADKDYLDKLICDGNVVPREDYFSTIDT
(restricted) Ga0233438_101016682	3300024255	Seawater	VTIKEAKRIAFGTTGAASLEEYHSAWQWLYDNDAELQEADMDYLDKLICDGNVVPRDDYFSTIDT
(restricted) Ga0233438_101144013	3300024255	Seawater	VNVKEAKRKAFGTTSCESLDEWHSAWQWLYDNYVELEQADKDYLDKLICDGNVVPRDDYFSTIDT
(restricted) Ga0233438_101391053	3300024255	Seawater	VNVKEAKRKAFGTTPCESLKEWHNAWQWLYDNKVELEKSDKDYLDKLICDGNVVPREDYFSTIDT
(restricted) Ga0233438_101512753	3300024255	Seawater	MNVGSAKRVAFGSVPVETLEDYYQAWQWLYDNDVELKQSDIDYLDKLICDGNVEPREDYFSTIDT
(restricted) Ga0233438_101784603	3300024255	Seawater	VKIAEAKRIAFGSTPCESLDEWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDT
(restricted) Ga0233438_102497922	3300024255	Seawater	VTQAEDKRTAFGSTPSATLEDYYEAWQWLYDHDVELKQPDIDYLDKLICDGNVIPKEDYFSTIDT
Ga0208791_10388083	3300025083	Marine	VNVKEAKRIAFGSTPSQSLDEWHDAWQWLYDNYVELEQSDKDYLDKLICDGNVVPREDYFSTIDT
Ga0208792_10506412	3300025085	Marine	VNVKEAKRVAFGSTPCESLDQWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPREDYFSTIDT
Ga0208669_10484921	3300025099	Marine	VNQAEAKRIAFGTTPSATLDEYFDAWQWLYDHDVDLKQPDINYLDKLICDGNVVPKEDYFSTIDT
Ga0209535_100096129	3300025120	Marine	VKVAEAKRIAFGSVSAKSIEEYFEAWQWLYDNEIDLKEPDINYLDKLICDGNVKPKDNYFSTIEA
Ga0209337_101262210	3300025168	Marine	VNQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVELKQPDIDYLDKLICDGNVVPKEDYFSTIDT
Ga0209337_10529025	3300025168	Marine	MKIAEAKRLAFGSTPAASLEEYHSAWQWLYDNDVELKQPDIDYLDKLICDGDVLPKDDYFSTIDT
Ga0209337_10543844	3300025168	Marine	VKIAEAKRLAFGSTPAASLEEYHSAWQWLYDNDVELKQPDIDYLDKLICDGSVIPREDYFSTIDT
Ga0209337_10734863	3300025168	Marine	VNQAEAKRTAFGSTPSATLEEYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVDPKEDYFSTIDT
Ga0209337_11080593	3300025168	Marine	MNVGEAKRIAFGSTPSASIEEYHSAWQWLYDNEVELKQSDIDYLDKLICDGNVIPRDDYFSTIDT
Ga0209337_11142093	3300025168	Marine	VNQAEAKRTAFGSTPSATLEEYYEAWQWLYDNDVELKQPDINYLDKLICDGNVIPKEDYFSTIDT
Ga0209337_11149203	3300025168	Marine	VTQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVEPKEDYFSTIDT
Ga0209337_11182024	3300025168	Marine	VTQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVIPKEDYFSTIDT
Ga0209337_11272862	3300025168	Marine	VNVKEAKRVAFGSTPCESLDEWHSAWQWLYDNYIDLEQSDKDYLDKLICDGNVIPRDDYFSTIDT
Ga0209337_11411143	3300025168	Marine	VKVAEAKRIAFGSVPADSLEQWHSAWQWLYDNDVELKQPDIDYLDKLICDGNVLPREDYFSTIDT
Ga0209337_11476033	3300025168	Marine	VKIAEAKRIAFGSVPADSLEQLHGAWQWLYDNDVELKQSDIDYLDKLICDGDVIPREDYFSTIDT
Ga0209337_11488133	3300025168	Marine	VKIAEAKRIAFGSVPADSLEQWHSAWQWLYDNDVELKQPDIDYLDKLICDGNVVPREDYFSTIDT
Ga0209337_11621043	3300025168	Marine	VKIAEAKRIAFGSVPADSLDQWHSAWQWLYDNDIELKQPDIDYLDKLICDGNVMPRE
Ga0209337_12244771	3300025168	Marine	VTQAEAKRTAFGSTPSATLEDYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVIPKEDYF
Ga0209337_12432842	3300025168	Marine	VKIAEAKRIAFGSVPADSLKQWHGAWQWLYDHDVELKQPDIDYLDKLICDGNVIPREDYFSTIDT
Ga0209337_12794862	3300025168	Marine	VKIAEAKRIAFGSVPADSLEQWHGAWQWLYDNDIELKQPDIDYLDKLICDGDVIPREDYFSTIDI
Ga0209337_13018322	3300025168	Marine	VKIAEAKRIAFGSVPADSLEQWHGAWQWLYDNDVELKQPDIDYLDKLICDGNVIPREDYFSTIDT
Ga0209337_13457811	3300025168	Marine	VKIAEAKRIAFGSIPSASIDEYHSAWQWLYDNEVELKEPDINYLDKLICDGMVNPREDYF
Ga0315315_100987592	3300032073	Seawater	VKIAEAKRIAFGSVPADSLEQWHSAWQWLYDNDIELKQPDIDYLDKLICDGNVVPREDYFSTIDT
Ga0315315_108405081	3300032073	Seawater	VKIAEAKRLAFGSTPAASLEEYHGAWQWLYDNDVELKQPDIDYLDKLICDGNVKPREDYFSTIDT
Ga0315315_112322702	3300032073	Seawater	VNQAEAKRTAFGSTPSATLEEYYEAWQWLYDHDVDLKQPDIDYLDKLICDGNVEPKEDYFSTIDT
Ga0315315_114496712	3300032073	Seawater	VTQAEAKRTAFGSTPSATLEEYYEAWQWLYDHDVDLKQPDINYLDKLICDGNVIPKEDYFSTIDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters