Metagenome Family F079138

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079138
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	60 residues
Representative Sequence	MAIAGAHRTAVGHGHRIERRRRRRTARSTAIWLAGLAAWSALFLGLGWLVAAGFYGLLANP
Number of Associated Samples	77
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.23 %
% of genes near scaffold ends (potentially truncated)	15.52 %
% of genes from short scaffolds (< 2000 bps)	67.24 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.276 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.414 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.552 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.92% β-sheet: 0.00% Coil/Unstructured: 37.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01182	Glucosamine_iso	37.93
PF00912	Transgly	29.31
PF10128	OpcA_G6PD_assem	6.03
PF02781	G6PD_C	3.45
PF09851	SHOCT	0.86
PF04324	Fer2_BFD	0.86
PF00196	GerE	0.86
PF00923	TAL_FSA	0.86
PF01936	NYN	0.86
PF02133	Transp_cyt_pur	0.86
PF02653	BPD_transp_2	0.86
PF01850	PIN	0.86
PF03446	NAD_binding_2	0.86
PF00892	EamA	0.86
PF00342	PGI	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	37.93
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	29.31
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	29.31
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	29.31
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	3.45
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.86
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.86
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
Unclassified	root	N/A	1.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	65.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
Unclassified	root	N/A	1.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	56.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
Unclassified	root	N/A	1.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	56.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
Unclassified	root	N/A	1.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001086\|JGI12709J13192_1001526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3459	Open in IMG/M
3300001545\|JGI12630J15595_10005558	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300001545\|JGI12630J15595_10017769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1514	Open in IMG/M
3300002245\|JGIcombinedJ26739_100015308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6435	Open in IMG/M
3300002245\|JGIcombinedJ26739_100285123	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300005167\|Ga0066672_10018390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3602	Open in IMG/M
3300005167\|Ga0066672_10051814	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300005167\|Ga0066672_10175693	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300005174\|Ga0066680_10458515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300005176\|Ga0066679_10024711	All Organisms → cellular organisms → Bacteria	3236	Open in IMG/M
3300005176\|Ga0066679_10079721	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300005176\|Ga0066679_10212216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1237	Open in IMG/M
3300005176\|Ga0066679_10949437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300005177\|Ga0066690_10588822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	743	Open in IMG/M
3300005179\|Ga0066684_10166150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1410	Open in IMG/M
3300005435\|Ga0070714_100150498	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300005435\|Ga0070714_100355373	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300005435\|Ga0070714_100796337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	915	Open in IMG/M
3300005435\|Ga0070714_101016762	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300005436\|Ga0070713_100863566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	869	Open in IMG/M
3300005436\|Ga0070713_102288952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300005437\|Ga0070710_11027431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300005445\|Ga0070708_101978792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300005454\|Ga0066687_10219175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1048	Open in IMG/M
3300005467\|Ga0070706_100149105	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300005468\|Ga0070707_100113793	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300005468\|Ga0070707_100525502	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005468\|Ga0070707_100818052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	895	Open in IMG/M
3300005471\|Ga0070698_100070210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3515	Open in IMG/M
3300005471\|Ga0070698_100159111	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300005471\|Ga0070698_101929624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300005518\|Ga0070699_102187919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300005536\|Ga0070697_100000022	All Organisms → cellular organisms → Bacteria	132993	Open in IMG/M
3300005536\|Ga0070697_100006832	All Organisms → cellular organisms → Bacteria	8857	Open in IMG/M
3300005536\|Ga0070697_100616075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	955	Open in IMG/M
3300005554\|Ga0066661_10041785	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300005559\|Ga0066700_10500774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	848	Open in IMG/M
3300005568\|Ga0066703_10494610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300006028\|Ga0070717_10008048	All Organisms → cellular organisms → Bacteria → Proteobacteria	7859	Open in IMG/M
3300006173\|Ga0070716_100053762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2297	Open in IMG/M
3300006797\|Ga0066659_10776512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	790	Open in IMG/M
3300006914\|Ga0075436_101486544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	514	Open in IMG/M
3300007982\|Ga0102924_1003875	All Organisms → cellular organisms → Bacteria	15431	Open in IMG/M
3300009038\|Ga0099829_10007271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6913	Open in IMG/M
3300009038\|Ga0099829_10110919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2147	Open in IMG/M
3300009038\|Ga0099829_11252902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300009088\|Ga0099830_11562247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300009089\|Ga0099828_10289778	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300009090\|Ga0099827_10288878	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300009090\|Ga0099827_10572590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	973	Open in IMG/M
3300009143\|Ga0099792_10752610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300012200\|Ga0137382_10744691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300012205\|Ga0137362_10820122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300012208\|Ga0137376_10238525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1576	Open in IMG/M
3300012361\|Ga0137360_11616875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300012917\|Ga0137395_10003761	All Organisms → cellular organisms → Bacteria	7597	Open in IMG/M
3300012917\|Ga0137395_10721930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300012925\|Ga0137419_10411873	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012927\|Ga0137416_10022750	All Organisms → cellular organisms → Bacteria	4040	Open in IMG/M
3300018433\|Ga0066667_10611718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	909	Open in IMG/M
3300018468\|Ga0066662_10243378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1464	Open in IMG/M
3300018468\|Ga0066662_10791490	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300019888\|Ga0193751_1005168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7353	Open in IMG/M
3300019888\|Ga0193751_1115284	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300020018\|Ga0193721_1038380	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300020579\|Ga0210407_11071030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300021046\|Ga0215015_10452750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3360	Open in IMG/M
3300021046\|Ga0215015_10941772	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300021362\|Ga0213882_10137668	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300021362\|Ga0213882_10335495	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300021418\|Ga0193695_1033288	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300021479\|Ga0210410_10099144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2572	Open in IMG/M
3300021559\|Ga0210409_10270833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1535	Open in IMG/M
3300025910\|Ga0207684_10002335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	19226	Open in IMG/M
3300025910\|Ga0207684_10004870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	12552	Open in IMG/M
3300025922\|Ga0207646_10131159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2255	Open in IMG/M
3300025922\|Ga0207646_10461215	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300025939\|Ga0207665_10013463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5379	Open in IMG/M
3300026309\|Ga0209055_1036724	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300026315\|Ga0209686_1201941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300026328\|Ga0209802_1108402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1238	Open in IMG/M
3300026335\|Ga0209804_1227796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	736	Open in IMG/M
3300026530\|Ga0209807_1064616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1652	Open in IMG/M
3300026530\|Ga0209807_1304910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300026880\|Ga0209623_1011220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300027521\|Ga0209524_1089675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300027537\|Ga0209419_1037616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	925	Open in IMG/M
3300027587\|Ga0209220_1000425	All Organisms → cellular organisms → Bacteria	14706	Open in IMG/M
3300027591\|Ga0209733_1085799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300027629\|Ga0209422_1155734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300027651\|Ga0209217_1030024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1705	Open in IMG/M
3300027663\|Ga0208990_1192333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300027667\|Ga0209009_1000721	All Organisms → cellular organisms → Bacteria	10627	Open in IMG/M
3300027678\|Ga0209011_1045758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1349	Open in IMG/M
3300027678\|Ga0209011_1205958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300027738\|Ga0208989_10085092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1081	Open in IMG/M
3300027748\|Ga0209689_1191733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300027846\|Ga0209180_10207346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1130	Open in IMG/M
3300027846\|Ga0209180_10257688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300027875\|Ga0209283_10482399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	800	Open in IMG/M
3300027882\|Ga0209590_10084320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1863	Open in IMG/M
3300027882\|Ga0209590_10482023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	801	Open in IMG/M
3300027882\|Ga0209590_10748727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	623	Open in IMG/M
3300027903\|Ga0209488_10283837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1238	Open in IMG/M
3300027903\|Ga0209488_10702193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300028536\|Ga0137415_10021537	All Organisms → cellular organisms → Bacteria → Proteobacteria	6384	Open in IMG/M
3300031753\|Ga0307477_10000486	All Organisms → cellular organisms → Bacteria	43743	Open in IMG/M
3300031823\|Ga0307478_10000586	All Organisms → cellular organisms → Bacteria	36406	Open in IMG/M
3300031962\|Ga0307479_10010776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8507	Open in IMG/M
3300031962\|Ga0307479_10045645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4210	Open in IMG/M
3300031962\|Ga0307479_10979381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300031962\|Ga0307479_11068236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	774	Open in IMG/M
3300031962\|Ga0307479_11632684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300032180\|Ga0307471_100772816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1127	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.28%
Aquatic	Environmental → Aquatic	0.86%
Plants	Host-Associated → Plants	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.55%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.76%
Loam	Environmental → Terrestrial → Soil → Loam	38.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	23.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.48%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	19.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001086	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026880	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12709J13192_10015262	3300001086	Forest Soil	MAIAGANRSAVGHGHRVERRRRRRIARSTAVWLAGAAAWSVLFLGLGWLVAAGFYGLLANP*
JGI12630J15595_100055582	3300001545	Forest Soil	MAIAGAHRSAVAHGHRVERRRRRRIARSIAIWLAGAAAWSVLFLGLGWLVAAGFYGLLANP*
JGI12630J15595_100177691	3300001545	Forest Soil	MAIAGAERSAVGHGHRVERRNRRRTHRATAHLVAGIGAWSFAFLALGWLVAAGFYGLLVNQ*
JGIcombinedJ26739_1000153086	3300002245	Forest Soil	MAIAGAXRSAVGHGXRXERRNRRRTHRATAHXVAGIGAWSFAFLALGWLVAAGFYGLLVNQ*
JGIcombinedJ26739_1002851232	3300002245	Forest Soil	MATAGARRTAVDHGHRIERRKRGRTARSTLLWLVGITAWSGLFLGLGWLVAAGFYGLLANP*
Ga0066672_100183902	3300005167	Soil	MALAGAQRTPSRHGRRLERRSRRRVTRANTLWLAGIAAWGLLFLTLGWLVAAGFYGLLVNA*
Ga0066672_100518142	3300005167	Soil	MAIAGAHRKAVGHGHRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLANP*
Ga0066672_101756932	3300005167	Soil	MSIAGAYRPTVRRGHRVERRSRRRVARATAIWVAGIAAWCVAFLALGWLIAAGFYGLLVSA*
Ga0066680_104585152	3300005174	Soil	MAIAGAHRTAVGHGHRIERRRRRRTARSTVIWLAGLAAWSALFLGLGWLVAAGFYGLLANP*
Ga0066679_100247112	3300005176	Soil	MALAGAQRTPSRHGRRLERRSRRRVTRATTLWLAGIAAWGLLFLTLGWLVAAGFYGLLVNA*
Ga0066679_100797212	3300005176	Soil	MAIAGAHRTAVNHGHRLERRRRGRIARSTAIWLAGLAAWSLLFLGLGWLVAAGFYGLLATP*
Ga0066679_102122162	3300005176	Soil	MAIAGARRTAAGHGHRIERRRRGRTVRSTAVWLAGLAAWSGLFLGLGWLVAAGFYGLLANP*
Ga0066679_109494371	3300005176	Soil	MAIAGAHRKVVGHGHRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLAN
Ga0066690_105888221	3300005177	Soil	MAIAGAYRKAVGHGHRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLANP*
Ga0066684_101661501	3300005179	Soil	MAIAGAHRKAVGHGHRVERRRRGRLARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLANQ*
Ga0070714_1001504982	3300005435	Agricultural Soil	MAIAGAHRTAVDHGHRIERRRRRRTARSTVIWLAGLAAWSALFLGLGWLVAAGFYGLLANP*
Ga0070714_1003553732	3300005435	Agricultural Soil	MSIAGAHRAAVGHGHRVERRSRRRTTRSATHRIAGVGAWSILFLALGWLVAAGFYGLLVNP*
Ga0070714_1007963372	3300005435	Agricultural Soil	MAIAGAERSPSRHSRRLERRSRRRVARATTIWLASIAAWCLLFLALGWLVAAGFYGLLVNG*
Ga0070714_1010167622	3300005435	Agricultural Soil	MAIAGANRAAVGHGHRIERRRRGRTVRSTALWLAGLAAWSGLFLGLGWLVAAGFYGLLANP*
Ga0070713_1008635662	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVDHGHRIERRRRRRTARSTVIWLAGLAAWSALFLGLGWLVA
Ga0070713_1022889522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGARRTAAGHGHRIERRRRGRTVRSTALWLVGLAAWSGLFLGLGWLVAAGFYGLLSNP*
Ga0070710_110274311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGANRAAVGHGHRIERRRRGRTVRSTVVWLAGLAAWSGLFLGLGWLVAAGFYGLLSNP*
Ga0070708_1000091536	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAERSPNRHGNRLERRNRRRITRATALWLAGVAAWCLLFLVLGWLVAAGFYGLLENV*
Ga0070708_1019787922	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAERSSSRHGRRLERRSRRRVARATAIWLAGIAGWSLVFLALGWLVVAGFYGLLVNA*
Ga0066687_102191752	3300005454	Soil	MAIAGAQRIPSRHGRRLERRNRRRVARATTRWLAGVAAWCLLFLALGWLVAAGFYGLLANA*
Ga0070706_1001491052	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVSHGHRVERRRRRRTARSTAIWLAGAIGWSALFLALGWLVAAGFYGLLANP*
Ga0070707_1001137932	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVGNGHRVERRRRGRTVRSTAIWLAEAIAWSALFLALGWLVAAGFYGLLANP*
Ga0070707_1005255022	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAGAHRAAVGHGRRVERRSRRRTIRTATLWVARVGAWSILFLALGWLVAVGFYGLLVNA*
Ga0070707_1008180521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVGHGHRIERRRRRRTARSTAIWLAGLAAWSALFLGLGWLVAAGFYGLLANP*
Ga0070698_1000702102	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVSHGHRVERRRRRRTARSTAIWLAGAIAWSALFLALGWLVAAGFYGLLANP*
Ga0070698_1001591112	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVGNGHRVGRRRRGRTVRSTAIWLAEAIAWSALFLALGWLVAAGFYGLLANP*
Ga0070698_1019296241	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	NSMAIAGAHRTAVDHGHRIERRRRRRTARSTAIWLAGLAAWSALFLGLGWLVAAGFYGLLANP*
Ga0070699_1021879192	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAAGHGHRIERRRRGRTVRSTALWLAGLAAWSGLFLGLGWLVAAGFYGLLANP*
Ga0070697_10000002257	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGEHRLAVRHGHRVERRKRRRGARSTALWLAAVAAWGLLFLTLGWLVAAGVYGLLVNP*
Ga0070697_1000068323	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVDHGHRIERRGRRRTARSTVIWLAGLAAWSALFLGLGWLVAAGFYGLLANP*
Ga0070697_1006160752	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGANRAAVGHGHRIERRRRGRTVRSTALWLAGLAAWSGLFLGLGWLVAAGFYGLLSNP*
Ga0066661_100417851	3300005554	Soil	MAIAGAQRIPSRHGRRLERRNRRRVARATTRWLAGVAAWCLLFLALGWLVAAGFYGLLVNA*
Ga0066700_105007742	3300005559	Soil	SMAIAGAYRKAVGHGHRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLANP*
Ga0066703_104946101	3300005568	Soil	MAIAGAYRKAVGHGHRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLA
Ga0070717_100080484	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVGHGHRVERRRRRRTARSTAIWLAGAIAWSALFLALGWLVAAGFYGLLANP*
Ga0070716_1000537624	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAGAHRAAVGHGHRVERRSRRRTTRSATHWIAGVGAWSILFLALGWLVAAGFYGLLVNP*
Ga0066659_107765121	3300006797	Soil	NMALAGAQRTPSRHGRRLERRSRRRVTRANTLWLAGIAAWGLLFLTLGWLVAAGFYGLLVNA*
Ga0075436_1014865441	3300006914	Populus Rhizosphere	MAIAGAERSPSRHGRRLERRSRRRVARATTIWLASIAAWCLLFLALGWLVAAGFYGLLVNG*
Ga0102924_10038757	3300007982	Iron-Sulfur Acid Spring	MAIAGAHRTAVGHGDRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLANP*
Ga0099829_100072716	3300009038	Vadose Zone Soil	MAIAGAKRTTVGDGHRVERRRRGRTARSTAIWLAGALAWSAIFLALGWLVAAGFYGLLANP*
Ga0099829_101109193	3300009038	Vadose Zone Soil	MSIAGAHRAVVGHGRRVERRSRRRTARAATLWVVGIGGWSILFLALGWLVAVGFYGLLVNP*
Ga0099829_112529021	3300009038	Vadose Zone Soil	MAIAGAHRTAVGHGHRLERRRRGRTVRSTAIWLAGLAAWSALFLGLGWLAAAGFYGLLANP*
Ga0099830_115622472	3300009088	Vadose Zone Soil	VGHGHRIERRRRGRTVRSTAIWLAGLAAWSALFLGLGWLAAAGFYGLLANP*
Ga0099828_102897782	3300009089	Vadose Zone Soil	MAIAGAHRTAVGHGHRIERRRRGRTVRSTAIWLAGLAAWSALFLGLGWLAAAGFYGLLANP*
Ga0099827_102888782	3300009090	Vadose Zone Soil	MAIAGAQRPAVSHGHHLERRNRRRRGRATALWVVGIAAWSALFLVLGWLVAAGFYGLLVTT*
Ga0099827_105725902	3300009090	Vadose Zone Soil	MAIAGAHRTAAGHGHRIERRRRGRTVRSTAIWLVGLAAWSGLFLGLGWLVAAGFYGLLANP*
Ga0099792_107526102	3300009143	Vadose Zone Soil	MAIAGAHRKAVGHGHRVERRRRGRIARSTATWLAAAAAWTALFLGLGWLVAAGFYGLLANP*
Ga0137382_107446911	3300012200	Vadose Zone Soil	SNTRQDRESSMAIAGAERSAVGHGHRVERRNRRRTSRATAQWFAGIGAWSIVFLALGWLVAAGFYGLLVNQ*
Ga0137362_108201222	3300012205	Vadose Zone Soil	MAIAGAHRTAVGHGHRIERRRRGRTVRSTANWLAGLAAWSALFLGLGWLAAAGFYGLLANP*
Ga0137376_102385252	3300012208	Vadose Zone Soil	MAIAGAERSAVGHGHRVERRNRRRTSRATAQWFAGIGAWSIVFLALGWLVAAGFYGLLVNQ*
Ga0137360_116168752	3300012361	Vadose Zone Soil	MAIAGARRTAVGHGHRIERRRRGRTVRSTANWLAGLAAWSALFLGLGWLAAAGFYGLLAN
Ga0137395_1000376111	3300012917	Vadose Zone Soil	QGREHSMAIAGAHRKAVGHGHRVERRRRGRIARSTAISLAGAIAWSALFLALGWLVAAGFYGLLANP*
Ga0137395_107219302	3300012917	Vadose Zone Soil	MAIGGAHRTAVGDGHRVERRRRGRTARSTAIWLAGALAWSAIFLALGWLVAAGFYGLLANP*
Ga0137419_104118732	3300012925	Vadose Zone Soil	MAIAGAHRKAVGHGHRVERRRRGRVARSTATWLVGAAAWTALFLGLGWLVAAGFYGLLASP*
Ga0137416_100227502	3300012927	Vadose Zone Soil	MAIAGAHRKAVGHGHRVERRRRGRLARSTATWLVGAAAWTALFLGLGWLVAAGFYGLLASP*
Ga0066667_106117181	3300018433	Grasslands Soil	MALAGAQRTPSRHGRRLERRSRRRVTRANTLWLAGIAAWGLLFLTLGWLVAAGFYGLLVN
Ga0066662_102433782	3300018468	Grasslands Soil	MAIAGAHRTAVGHGHRIERRRRRRTARSTVIWLAGLAAWSALFLGLGWLVAAGFYGLLAN
Ga0066662_107914902	3300018468	Grasslands Soil	MSIAGAYRSTVRRGHRVERRSRRRVARETVIWVAGIAAWCVAFLALGWLIAAGFYGLLVS
Ga0193751_10051683	3300019888	Soil	MSIAGARRAAVGHGHRVERRSRRRTSRATTHWIAGIGAWSILFLALGWLVAAGFYGLLVN
Ga0193751_11152842	3300019888	Soil	MAIAGAHRETVSHGRRIERRRRGRTVRSTAIWLAGLAAWSGLFLGLGWLVAAGFYGLLAN
Ga0193721_10383802	3300020018	Soil	MAIAGARRSAANHGHRLERRNRRRTSRATVQWVAGIGAWSIGFLALGWLVAAGFYGLLVN
Ga0210407_110710302	3300020579	Soil	MSIAGAHRTAVGHGHRVERRRRGRTARSTAIWLSGAIAWSALFLTLGWLLAAGFYGLLAN
Ga0215015_104527502	3300021046	Soil	MAIAGAERSPSRHGRRLERRSRRRVTRATTLWLAGIAAWCLLFLALGWLVAAGFYGLLVN
Ga0215015_109417721	3300021046	Soil	IRDRAITGAHRSAVGHGHRVERRRRRRIARSTAFWLAGAAGWGLIFLALGWLVAAGFYGLLVTP
Ga0213882_101376682	3300021362	Exposed Rock	MSIAGAYRATLGRGRRVERRSRRRVTRDTALWVAGIAGWCGVFLALGWLIAVGFYGLLVS
Ga0213882_103354952	3300021362	Exposed Rock	MSIAGAYRATLGRGRRVERRSRRRVTRDTAMWLAGIAAWCGVFLALGWLIAAGFYGLLVS
Ga0193695_10332882	3300021418	Soil	MAIAGAHRSTVGHGHRVERRNRRRTARATAQWFAGIGAWSVVFLAHGWLVAAGFYGLLVN
Ga0210410_100991442	3300021479	Soil	MAIAGAHRKAVGHGHRVERRRRGRIARSTAIWLAGAAAWTALFLGLGWLVAAGFYGLLAS
Ga0210409_102708333	3300021559	Soil	MATAGARRTAVEHGHRIERRKRGRTTRSTVLWLVGITAWSGLFLGLGWLVAAGFYGLLAT
Ga0207684_1000233522	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAERSPNRHGNRLERRNRRRITRATALWLAGVAAWCLLFLVLGWLVAAGFYGLLEN
Ga0207684_1000487011	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVSHGHRVERRRRRRTARSTAIWLAGAIGWSALFLALGWLVAAGFYGLLAN
Ga0207646_101311592	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAGAHRTAVGNGHRVERRRRGRTVRSTAIWLAEAIAWSALFLALGWLVAAGFYGLLAN
Ga0207646_104612152	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAGAHRAAVGHGRRVERRSRRRTIRTATLWVARVGAWSILFLALGWLVAVGFYGLLVN
Ga0207665_100134632	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAGAVQAAVGHGHRVERRSRRRTTRSATHWIAGVGAWSILFLALGWLVAAGFYGLLVN
Ga0209055_10367242	3300026309	Soil	MALAGAQRTPSRHGRRLERRSRRRVTRATTLWLAGIAAWGLLFLTLGWLVAAGFYGLLVN
Ga0209686_12019412	3300026315	Soil	MSIAGAYRPTVRRGHRVERRSRRRVARATAIWVAGIAAWCVAFLALGWLIAAGFYGLLVS
Ga0209802_11084021	3300026328	Soil	MAIAGAHRTAVGHGHRIERRRRRRTARSTVIWLAGLAAWSALFLGLGWLV
Ga0209804_12277961	3300026335	Soil	MAIAGAQRIPSRHGRRLERRNRRRVARATTRWLAGVAAWCLLFLALGWLVAAGFYGLLAN
Ga0209807_10646162	3300026530	Soil	MAIAGAYRKAVGHGHRVERRRRGRIARSTATWLAGAAAWTALFLGLGWLVAAGFYGLLAN
Ga0209807_13049102	3300026530	Soil	KAGQAAAMSIAGAYRPTVRRGHRVERRSRRRVARATAIWVAGIAAWCVAFLALGWLIAAGFYGLLVSA
Ga0209623_10112201	3300026880	Forest Soil	MAIAGAERSAVGHGHRVERRNRRRTHRATAHLVAGIGAWSFAFLALGWLVAAGFYGLLVN
Ga0209524_10896751	3300027521	Forest Soil	MAIAGAHRSAVAHGHRVERRRRRRIARSIAIWLAGAAAWSVLFLGLGWLVAAGFYGLLAN
Ga0209419_10376161	3300027537	Forest Soil	MATAGAHRTAVGHGHRIERRKRGRTARSTVLWLVGITAWSGLFLGLGWLVAAGFYGLLAN
Ga0209220_10004256	3300027587	Forest Soil	MAIAGANRSAVGHGHRVERRRRRRIARSTAVWLAGAAAWSVLFLGLGWLVAAGFYGLLAN
Ga0209733_10857992	3300027591	Forest Soil	MAIAGAHRTATGRGHRVERRRRGRTARSTAIWLAGATAWTVLFIGLGWLVAAGFYGLLAN
Ga0209422_11557342	3300027629	Forest Soil	MATAGAHRTAVGHGHRIERRKRGRTARSTVLWLVGITAWSGLFLGLGWLVAA
Ga0209217_10300242	3300027651	Forest Soil	MAIAGAHRSGDGHGHRVERRRRRRIARSTALWFAGVAGWSVLFLGLGWLVAAGFYGLLAN
Ga0208990_11923332	3300027663	Forest Soil	MAIAGAHRKAVGHGHRVERRRRGRIARSTATWLAAAAAWTALFLGLGWLVAAGFYG
Ga0209009_10007214	3300027667	Forest Soil	MATAGAHRTAVGHGHRIERRKRGRTARSTVLWLVGMAAWSGLFLGLGWLVAAGFYGLLAN
Ga0209011_10457582	3300027678	Forest Soil	MATAGARRTAVDHGHRIERRKRGRTVRSTLLWLVGITAWSGLFLGLGWLVAAGFYGLLAN
Ga0209011_12059582	3300027678	Forest Soil	MAIAGAHRSGDGHGHRVERRRRRRIVRSTALWFAGVAAWSMLFLGLGWLVAAGFYGLLAN
Ga0208989_100850921	3300027738	Forest Soil	MAIAGAHRSAVGHDHRVERRRRRRIARSAAMWLAGAAAWSVLFLGLGWLVAAGFYGLLAN
Ga0209689_11917332	3300027748	Soil	MAIAGAHRTAVNHGHRLERRRRGRIARSTAIWLAGLAAWSLLFLGLGWLVAAGF
Ga0209180_102073462	3300027846	Vadose Zone Soil	MSIAGAHRAVVGHGRRVERRSRRRTARAATLWVVGIGGWSILFLALGWLVAVGFYGLLVN
Ga0209180_102576881	3300027846	Vadose Zone Soil	MAIAGAKRTTVGDGHRVERRRRGRTARSTAIWLAGALAWSAIFLALGWLVAAGFYGLLAN
Ga0209283_104823991	3300027875	Vadose Zone Soil	TNQVRVRGRENSMAIAGAHRTAVGHGHRIERRRRGRTVRSTAIWLAGLAAWSALFLGLGWLAAAGFYGLLANP
Ga0209590_100177853	3300027882	Vadose Zone Soil	MAIAGAHRSAVGHGHRLERRNRRRTHRAAAHWVAGLAAWSVFFLVLGWLVAAGFYGLVNP
Ga0209590_100843202	3300027882	Vadose Zone Soil	MAIAGAHRTAVGHGHRIERRRRGRTVRSTAIWLAGLAAWSALFLGLGWLAAAGFYGLLAN
Ga0209590_104820232	3300027882	Vadose Zone Soil	MAIAGAHRTAAGHGHRIERRRRGRTVRSTAIWLVGLAAWSGLFLGLGWLVAAGFYGLLAN
Ga0209590_107487271	3300027882	Vadose Zone Soil	MAIAGAQRPAVSHGHHLERRNRRRRGRATALWVAGIAAWSTLFLVLGWLVAAGFYGLLVT
Ga0209488_102838372	3300027903	Vadose Zone Soil	MAIAGAHRKAVGHGNRVERRRRGRIARSTAISLAGAIAWSALFLALGWLVAAGFYGLLAN
Ga0209488_107021932	3300027903	Vadose Zone Soil	HRTAVGHGHRIERRRRGRTVRSTAIWLAGLAAWSALFLGLGWLAAAGFYGLLANP
Ga0137415_100215377	3300028536	Vadose Zone Soil	MAIAGAHRKAVGHGHRVERRRRGRLARSTATWLVGAAAWTALFLGLGWLVAAGFYGLLAS
Ga0307477_1000048645	3300031753	Hardwood Forest Soil	MATAGAHRTAVDHGHRIERRKRGRTTRSTVLWLVGITAWGGLFLGLGWLVAAGFYGLLAN
Ga0307478_1000058618	3300031823	Hardwood Forest Soil	MATAGAHRTAVDHGHRIERRKRGRTTRSTVLWLVGITAWGGLFVALGWLVAAGFYGLLAT
Ga0307479_100107762	3300031962	Hardwood Forest Soil	MAIAGAHRTAAGHGHRIERRRRGRTVRSTALWLAGLAAWSGLFLGLGWLVAAGFYGLLAN
Ga0307479_100456453	3300031962	Hardwood Forest Soil	MAIAGAERSPSRHGHRLERRSRRRVARATTLWLATVAAWSLVFLALGWLVAAGFYGLLVN
Ga0307479_109793812	3300031962	Hardwood Forest Soil	MSIAGAHRTAVGHGHRVERRRRGRTARSTAIWLSGAMAWSALFVTLGWLVAAGFYGLLAN
Ga0307479_110682361	3300031962	Hardwood Forest Soil	MAIAGAQRAPSRHGHRLERRKRRRMIRSTTLWLAGIAAWCLVFLALGWLVAAGFYGLLVN
Ga0307479_116326842	3300031962	Hardwood Forest Soil	MAIAGAKRAAVGHGHRIERRRRGRTVRSTALWLAGLAAWSGLFLGLGWLVAAGFYGLLSN
Ga0307471_1007728162	3300032180	Hardwood Forest Soil	MAIAGAERSPSRHSRRLERRSRRRVARATTIWLASIAAWCLLFLALGWLVAAGFYGLLVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079138

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences