Metagenome / Metatranscriptome Family F079030

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079030
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	82 residues
Representative Sequence	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC
Number of Associated Samples	103
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.65 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	81.90 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.034 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.069 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.414 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.38% β-sheet: 1.87% Coil/Unstructured: 60.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03704	BTAD	6.90
PF00196	GerE	6.03
PF14026	DUF4242	2.59
PF13191	AAA_16	1.72
PF00486	Trans_reg_C	1.72
PF01872	RibD_C	1.72
PF01243	Putative_PNPOx	0.86
PF01789	PsbP	0.86
PF00903	Glyoxalase	0.86
PF07366	SnoaL	0.86
PF08281	Sigma70_r4_2	0.86
PF13424	TPR_12	0.86
PF01047	MarR	0.86
PF13384	HTH_23	0.86
PF02371	Transposase_20	0.86
PF02635	DrsE	0.86
PF07883	Cupin_2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	6.90
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	6.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.72
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
All Organisms	root	All Organisms	43.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
cellular organisms	root	All Organisms → cellular organisms	43.10 %
Viruses	superkingdom	All Organisms → Viruses	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.45 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.59 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.86 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.03 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4.31 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.86 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.03 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	3.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.86 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.03 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	3.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.86 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.03 %
Intrasporangium calvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium calvum	3.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.86 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102IO59S	Not Available	511	Open in IMG/M
2170459010\|GIO7OMY01COAHB	Not Available	534	Open in IMG/M
2199352024\|deeps__Contig_102923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2377	Open in IMG/M
3300000880\|AL20A1W_1013954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2116	Open in IMG/M
3300000956\|JGI10216J12902_100270197	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300001534\|A15PFW1_10207972	Not Available	521	Open in IMG/M
3300001534\|A15PFW1_10670306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium calvum	1338	Open in IMG/M
3300001536\|A1565W1_10087995	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300004463\|Ga0063356_104970113	Not Available	571	Open in IMG/M
3300004479\|Ga0062595_100130459	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300005166\|Ga0066674_10267895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300005186\|Ga0066676_10006023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5652	Open in IMG/M
3300005336\|Ga0070680_100016981	All Organisms → cellular organisms → Bacteria	5731	Open in IMG/M
3300005337\|Ga0070682_101827104	Not Available	531	Open in IMG/M
3300005354\|Ga0070675_100635800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	969	Open in IMG/M
3300005440\|Ga0070705_100077700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2028	Open in IMG/M
3300005440\|Ga0070705_100370910	Not Available	1050	Open in IMG/M
3300005445\|Ga0070708_100223682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1765	Open in IMG/M
3300005445\|Ga0070708_100499935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium calvum	1147	Open in IMG/M
3300005446\|Ga0066686_10707858	Not Available	679	Open in IMG/M
3300005456\|Ga0070678_102293564	Not Available	512	Open in IMG/M
3300005467\|Ga0070706_100011051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8383	Open in IMG/M
3300005468\|Ga0070707_100227789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1815	Open in IMG/M
3300005471\|Ga0070698_100396363	Not Available	1313	Open in IMG/M
3300005518\|Ga0070699_100211058	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300005536\|Ga0070697_101814556	Not Available	546	Open in IMG/M
3300005543\|Ga0070672_101046504	Not Available	724	Open in IMG/M
3300005546\|Ga0070696_100761091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium calvum	794	Open in IMG/M
3300005552\|Ga0066701_10358446	Not Available	903	Open in IMG/M
3300005554\|Ga0066661_10380302	Not Available	864	Open in IMG/M
3300005555\|Ga0066692_10910968	Not Available	539	Open in IMG/M
3300005556\|Ga0066707_10011418	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4391	Open in IMG/M
3300005556\|Ga0066707_10739996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium calvum	612	Open in IMG/M
3300006175\|Ga0070712_100467275	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300006796\|Ga0066665_10081789	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300006854\|Ga0075425_102600314	Not Available	559	Open in IMG/M
3300009012\|Ga0066710_100240695	Not Available	2610	Open in IMG/M
3300009012\|Ga0066710_101440712	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1066	Open in IMG/M
3300009012\|Ga0066710_102118281	Not Available	826	Open in IMG/M
3300009090\|Ga0099827_10957652	Not Available	742	Open in IMG/M
3300009093\|Ga0105240_11614948	Not Available	678	Open in IMG/M
3300009094\|Ga0111539_11760033	Not Available	719	Open in IMG/M
3300009137\|Ga0066709_100013841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7633	Open in IMG/M
3300009137\|Ga0066709_103908596	Not Available	541	Open in IMG/M
3300009156\|Ga0111538_12126463	Not Available	705	Open in IMG/M
3300009551\|Ga0105238_10532866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1178	Open in IMG/M
3300009818\|Ga0105072_1084840	Not Available	625	Open in IMG/M
3300010152\|Ga0126318_10411829	Not Available	730	Open in IMG/M
3300010301\|Ga0134070_10160547	Not Available	810	Open in IMG/M
3300010304\|Ga0134088_10490144	Not Available	605	Open in IMG/M
3300010320\|Ga0134109_10327250	Not Available	596	Open in IMG/M
3300010323\|Ga0134086_10140560	Not Available	876	Open in IMG/M
3300010335\|Ga0134063_10109751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1257	Open in IMG/M
3300010362\|Ga0126377_11284575	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010375\|Ga0105239_13224040	Not Available	531	Open in IMG/M
3300011997\|Ga0120162_1097054	Not Available	624	Open in IMG/M
3300012003\|Ga0120163_1027544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1579	Open in IMG/M
3300012003\|Ga0120163_1056155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	937	Open in IMG/M
3300012010\|Ga0120118_1061924	All Organisms → cellular organisms → Bacteria → Terrabacteria group	930	Open in IMG/M
3300012204\|Ga0137374_10022921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7027	Open in IMG/M
3300012206\|Ga0137380_10944334	Not Available	739	Open in IMG/M
3300012207\|Ga0137381_11799571	Not Available	502	Open in IMG/M
3300012210\|Ga0137378_10579488	Not Available	1031	Open in IMG/M
3300012210\|Ga0137378_11690407	Not Available	539	Open in IMG/M
3300012350\|Ga0137372_10011246	All Organisms → cellular organisms → Bacteria	8581	Open in IMG/M
3300012356\|Ga0137371_10459099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	985	Open in IMG/M
3300012361\|Ga0137360_11210972	Not Available	653	Open in IMG/M
3300012362\|Ga0137361_10600317	Not Available	1009	Open in IMG/M
3300012532\|Ga0137373_10040774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	4407	Open in IMG/M
3300012915\|Ga0157302_10216211	Not Available	697	Open in IMG/M
3300012929\|Ga0137404_11424386	Not Available	640	Open in IMG/M
3300012951\|Ga0164300_10805795	Not Available	583	Open in IMG/M
3300012955\|Ga0164298_10778398	Not Available	681	Open in IMG/M
3300012961\|Ga0164302_11357043	Not Available	578	Open in IMG/M
3300012976\|Ga0134076_10019528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2392	Open in IMG/M
3300013105\|Ga0157369_10276870	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300013763\|Ga0120179_1108579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	611	Open in IMG/M
3300014056\|Ga0120125_1116340	Not Available	634	Open in IMG/M
3300014154\|Ga0134075_10358468	All Organisms → cellular organisms → Bacteria → Terrabacteria group	640	Open in IMG/M
3300014823\|Ga0120170_1078170	Not Available	691	Open in IMG/M
3300015358\|Ga0134089_10122030	Not Available	1013	Open in IMG/M
3300015359\|Ga0134085_10498154	Not Available	557	Open in IMG/M
3300015372\|Ga0132256_100344282	Not Available	1583	Open in IMG/M
3300015374\|Ga0132255_103168821	Not Available	701	Open in IMG/M
3300015374\|Ga0132255_103555478	Not Available	663	Open in IMG/M
3300018056\|Ga0184623_10059700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1748	Open in IMG/M
3300018074\|Ga0184640_10225325	Not Available	849	Open in IMG/M
3300018433\|Ga0066667_10956260	Not Available	738	Open in IMG/M
3300018468\|Ga0066662_11129495	Not Available	786	Open in IMG/M
3300018468\|Ga0066662_11423184	Not Available	718	Open in IMG/M
3300019263\|Ga0184647_1425177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300019377\|Ga0190264_10150862	All Organisms → Viruses → Predicted Viral	1198	Open in IMG/M
3300019888\|Ga0193751_1029455	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300020069\|Ga0197907_10119449	Not Available	520	Open in IMG/M
3300025313\|Ga0209431_10302133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1252	Open in IMG/M
3300025313\|Ga0209431_10536684	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300025324\|Ga0209640_11003689	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300025325\|Ga0209341_11076114	Not Available	583	Open in IMG/M
3300025909\|Ga0207705_11035472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300025910\|Ga0207684_10014870	All Organisms → cellular organisms → Bacteria	6697	Open in IMG/M
3300025912\|Ga0207707_10704914	Not Available	847	Open in IMG/M
3300025916\|Ga0207663_10526025	Not Available	922	Open in IMG/M
3300025922\|Ga0207646_10217281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1727	Open in IMG/M
3300025940\|Ga0207691_11057693	Not Available	676	Open in IMG/M
3300026313\|Ga0209761_1165769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1025	Open in IMG/M
3300026532\|Ga0209160_1083860	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300026538\|Ga0209056_10118247	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300027882\|Ga0209590_11003981	Not Available	520	Open in IMG/M
3300030006\|Ga0299907_10001376	All Organisms → cellular organisms → Bacteria	13833	Open in IMG/M
3300031231\|Ga0170824_118222621	Not Available	504	Open in IMG/M
3300031996\|Ga0308176_12612874	Not Available	538	Open in IMG/M
3300032180\|Ga0307471_104294489	Not Available	503	Open in IMG/M
3300033417\|Ga0214471_11411097	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.21%
Host-Associated	Host-Associated	13.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.76%
Plants	Host-Associated → Plants	13.79%
Aquatic	Environmental → Aquatic	3.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Sediment	Environmental → Aquatic → Sediment	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.79%
Loam	Environmental → Terrestrial → Soil → Loam	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Sand	Environmental → Terrestrial → Soil → Sand	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.31%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_02422290	2170459002	Grass Soil	MKKMLILAATGAAALSVGVATSAATPTTPNGYCGALNMVQAWPGGGANVPDGGGMQNAMSVDNANGNTGMSVAVG
F62_00135910	2170459010	Grass Soil	MKNVLILAATVAAALSLGVATSGATTQTPNGYCGAANMVNSWPGGGANVPDGGGMQRAMTVDNANGNTGMSIAVGNTAC
deeps_01817260	2199352024	Soil	MRKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC
INPhiseqgaiiFebDRAFT_1054489392	3300000364	Soil	MKEARDEAHTPCCGQSAAPDRRVGAPHRLQTANNKEDEVKNLLILAATAAAALTIGVATSGATTETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVAATTC*
AL20A1W_10139542	3300000880	Permafrost	MKNVLILAATAAAALSVGVATSGATTQTPNGYCGAANMINSWPGGGANVPDGGGMQNAMTVNNANGNSGMSIAVGNTAC*
JGI10216J12902_1002701973	3300000956	Soil	MHKLLILAATIAATLGLSVATAAATPQTPNLKCGAYNMVQAWPGGGASVPGDRGMQRAMAVDNSNGNDGMSTAVNNTAC*
A15PFW1_102079721	3300001534	Permafrost	QSAANEQEEDEMKKMLILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMQNAMTVNNANGNAGMTTAVGNSACG*
A15PFW1_106703063	3300001534	Permafrost	MKNVLILAATAAAALSVGVATSAATPQTPNGYCGAANMLNSWPGGGANVPADGGMQNAMTVNNANGNNGMFGAVGATAC*
A1565W1_100879952	3300001536	Permafrost	MKNVLILAATAAAALSVGVATSGATTQTPNGYCGAANMINSWPGGGANVPDGGGMQNAMTVNNANGNSGMSIAVGNT
Ga0062590_1016652031	3300004157	Soil	MKEARDEAHTPCCSQSAAPDRRVGAPRRLQTANNKEDEVKNLLILAATAAAALTIGVATSGATTETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVAATAC*
Ga0063356_1049701132	3300004463	Arabidopsis Thaliana Rhizosphere	VVEEPSSYQQEETEMNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGRGMQHAMTVDNANGNAGMSTAVGN
Ga0062595_1001304593	3300004479	Soil	MSNATGQCGFWDGPEVHQTDTNKEDEMKKVLILAATVAAAMSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPDGGGMQNAMTVDNANGNTGMFTAVGASAC*
Ga0066674_102678952	3300005166	Soil	AAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0066676_100060235	3300005186	Soil	GPEVHQTDTNKEDEMKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGNAGMSTAVGNSACG*
Ga0070680_1000169813	3300005336	Corn Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLRAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0070682_1018271041	3300005337	Corn Rhizosphere	DTNKEDEMKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLRAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0070675_1006358002	3300005354	Miscanthus Rhizosphere	ETEMNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGGGMQHAMTVDNANGNDGMSTAVGNSAC*
Ga0070705_1000777003	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGRTAC*
Ga0070705_1003709101	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMQNAMTVNNANGNAGMATAVGNSACG*
Ga0070708_1002236821	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLLILAAAFAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGRTAC*
Ga0070708_1004999351	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC*
Ga0066686_107078581	3300005446	Soil	MKKILILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGNTGMSTAVGNSACG*
Ga0070678_1022935642	3300005456	Miscanthus Rhizosphere	VVEEPSSYQQEETEMNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGRGMQHAMTVDNANGNDGMSTAVGNSAC*
Ga0070706_1000110518	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLLILAAAFAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPDGGGMRHAMTVNNANGNNGMFGAVGRTAC*
Ga0070707_1002277894	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLILAATIASALSVAVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNAGMSRAVGNSACG*
Ga0070698_1003963632	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPFERILAATELAVAQWGSYDQDRSSQTDSNSNKEDEMKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLQAWPGGGANVPDGRGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0070699_1002110581	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPNGFCGALNMLQAWPGGGANVPDGRGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0070697_1018145562	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RVGAPRRLRTANNKEDEVKNLLILAATAAAALTIGVATSSATPETPNGYCGAANMLNAWPGGGANVPTGGGMQHAMTVNNANGNNGMFGAVGASAC*
Ga0070672_1010465042	3300005543	Miscanthus Rhizosphere	MNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGRGMQHAMTVDNANGNDGMSTAVGNSAC*
Ga0070696_1007610912	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VKKLLILAATAAAALSVGVATSGATSETPNGYCGAANMLNAWPGGGANVPIGGGMQNAMTVNNPNGNSGMFAAVGATAC*
Ga0066701_103584462	3300005552	Soil	MKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLQAWPGGGANVSDGGGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0066661_103803023	3300005554	Soil	MKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLQAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0066692_109109682	3300005555	Soil	VKRPLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0066707_100114184	3300005556	Soil	MKKILILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGNTGM
Ga0066707_107399962	3300005556	Soil	VKRLLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0070712_1004672752	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRMLILAATAAAALGVGVTTSAAAPTTPNGYCGALNMVQAWPGGGANVPAGGGMQNAMSVDNSNGNAGMATTVGNSACG*
Ga0066665_100817892	3300006796	Soil	MKKILILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGNAGMSTAVGNSACG*
Ga0075425_1026003141	3300006854	Populus Rhizosphere	VKRLLILSATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANSNNGMFGSVGATAC*
Ga0066710_1002406953	3300009012	Grasslands Soil	MKKVLILAATVAAALSVSVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC
Ga0066710_1014407124	3300009012	Grasslands Soil	MKKILILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGN
Ga0066710_1021182812	3300009012	Grasslands Soil	MGSYNQDRSSQTDSDNNKEDEMKKVLILAATITAALSVGVATSAATPTTPGGYCGALNMIHAWPGGGANVPDGGGMENAMSVNNANGNTGMSTAVRNSACG
Ga0099827_109576522	3300009090	Vadose Zone Soil	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC*
Ga0105240_116149482	3300009093	Corn Rhizosphere	MGSYNHDRSSQTDSNKEDEMKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLRAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0111539_117600331	3300009094	Populus Rhizosphere	TEMNKVLILAATIAATLGTSVGTADARTPTPNGYCGASNMVQAWPGGGANVPDGGGMQHAMTVDNANGNAGMSTAVGNSAC*
Ga0066709_1000138414	3300009137	Grasslands Soil	MKKVLILAATVAAALSVSVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC*
Ga0066709_1039085961	3300009137	Grasslands Soil	VKNLLILAATAAAALTIGVATSGATTETPNHYCGAANMLNAWPGGGANVPDGGGMQNAMTVNNANGNSGMFGAVGATAC*
Ga0111538_121264632	3300009156	Populus Rhizosphere	MSKVLILAATIAAALSLGVGTADARTPTPNGYCGAYNMVQAWPGGGANVPDGGGMQHAMTVNMKNNTNGNDG
Ga0105238_105328663	3300009551	Corn Rhizosphere	VKKLLILAATAAAALSVGVATSGATSQTPNGYCGAANMLNAWPGGGANVPSGGGMQNAMTVNNPNGNSGMFGAVGATAC*
Ga0105072_10848401	3300009818	Groundwater Sand	VKNLLILAATAAAALTIGVATSGATTETPNHYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGNTGC*
Ga0126318_104118291	3300010152	Soil	VKRLLILAATLAAALSVGVASSGAAPETPNGYCGAANMLNAWPGGGANVPDGGGMQNAMTVNNANGNTGMFGAVGASGC*
Ga0134070_101605472	3300010301	Grasslands Soil	VKNLLILAATVAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0134088_104901441	3300010304	Grasslands Soil	VKRLLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVAATAC*
Ga0134109_103272502	3300010320	Grasslands Soil	VKRLLILAATLAAALCVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0134086_101405601	3300010323	Grasslands Soil	VKRLLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNTNGNNGMFGAVGATAC*
Ga0134063_101097514	3300010335	Grasslands Soil	MKKIRILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGNTGMSTAVGNSACG*
Ga0134063_105228831	3300010335	Grasslands Soil	APDRRVGAPRRLQIANNKEDKVKRLLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0126377_112845751	3300010362	Tropical Forest Soil	MSKVLILAATIAAALSIGVGTADARTPTPNGYCGAYNMVQAWPGGGANVPDGGGMEHAMTVNNANGNTGMSTAVGNSAC*
Ga0105239_132240401	3300010375	Corn Rhizosphere	LILAATIAAALGLSVGTAAATPKPTPGGYCGALNMVHAFPGGGANVPDGGGMEHAMTVDNANGNTGMSTAVGHSAC*
Ga0120162_10970541	3300011997	Permafrost	MKKMLILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMQNAMTVNNANGNAGMTTAVGNSACG*
Ga0120163_10275442	3300012003	Permafrost	KKRLLLTSTIAAPLSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMQNAMTVNNANGNAGMTTAVGNSACG*
Ga0120163_10561551	3300012003	Permafrost	MKIVLPRAAPAAAALSVGVATSAATPQTPNGYCGAANMLNSWPGGGANVPADGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0120118_10619242	3300012010	Permafrost	VHPQTDSNKEDEMKKMLILAATVAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMQNAMTVNNANGNAGMATAVGNSACG*
Ga0137374_100229215	3300012204	Vadose Zone Soil	MSNFNPKEEDEMKKVLILAASIAAAMSVGVATSAATATTPNGYCGALNMVQAWPGGGANVPDGGGMEHAMSVDNANGNTGMSTAVANSACG*
Ga0137380_109443342	3300012206	Vadose Zone Soil	MKKVLILAATVAAALSVSVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMSTAVGASAC*
Ga0137381_117995712	3300012207	Vadose Zone Soil	VRILGRTGSSPTDTNKEDEMKKVLILAATVAAALSVSVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMSTAVGASAC*
Ga0137378_105794882	3300012210	Vadose Zone Soil	MKKVLILAATIAAGLSVGVATSVATPTTPGGYCGALNMIHAWPGGGANVPDGGGMQNAMTVDNANGNTGMSIAVGNSACG*
Ga0137378_116904071	3300012210	Vadose Zone Soil	MKKMLILAATVAAALCVGVATSAATPTTPGGYCGALNMVHAWPGEGANVPDGGGMENAMTVDNANGNTGMSTAVGNSAC*
Ga0137372_1001124612	3300012350	Vadose Zone Soil	MKKVLILAASIAAAMSVGVATSAATATTPNGYCGALNMVQAWPGGGANVPDGGGMEHAMSVDNANGNTGMSTAVANSACG*
Ga0137371_104590991	3300012356	Vadose Zone Soil	RLQIANNKEDKVKNLLILAATVAAALSVGVATSGATPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0137360_112109722	3300012361	Vadose Zone Soil	VKNLLILAATAAAALSVGVATSGATPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0137361_106003173	3300012362	Vadose Zone Soil	VKRLLILAATLAAALSVGVPTSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0137373_1004077410	3300012532	Vadose Zone Soil	SNFNPKEEDEMKKVLILAASIAAAMSVGVATSAATATTPNGYCGALNMVQAWPGGGANVPDGGGMEHAMSVDNANGNTGMSTAVANSACG*
Ga0157302_102162112	3300012915	Soil	VVEEPSSYQQEETEMNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGRGMQHAMTVDNANGNAGMSTAVGNSAC*
Ga0137404_114243862	3300012929	Vadose Zone Soil	VRILGRTGSSPTDTNKEDEMKKVLILAATVAAALSVSVATSVATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMSTAVGASACWTASLAVFVA
Ga0164300_108057952	3300012951	Soil	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPAGGGMENAMTVDNANGNTGMFTAVGASAC*
Ga0164298_107783981	3300012955	Soil	MKKVLILTATVAAALSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPAGGGMENAMTVDNANGNTGMFTAVSASSC*
Ga0164302_113570431	3300012961	Soil	EETEMNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGRGMQHAMAVDNANGNAGMSTAVGNSAC*
Ga0134076_100195284	3300012976	Grasslands Soil	MKKILILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC*
Ga0157369_102768703	3300013105	Corn Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMLQAWPGGGANVPDGGGMQNAMSVDNANGNTGMFTAVGASAC*
Ga0120179_11085793	3300013763	Permafrost	MKNVLILAATAAAALSVGVATSGATTQTPNGYCGAANMINSWPGGGANVPDGGGMQNAMSVNNANGNSGMSIAVGNTAC*
Ga0120125_11163401	3300014056	Permafrost	MKKMLILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPAGGGMENAVTVNNANGNTGMATAVGNSACG*
Ga0134075_103584681	3300014154	Grasslands Soil	ALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0120170_10781701	3300014823	Permafrost	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVQAWPGGGANVPDGGGMQNAMTVNNANGNAGMATAVGNSACG*
Ga0134089_101220301	3300015358	Grasslands Soil	VLILAATVAAALSVGVATSAATTTTPNGYCGALNMLQAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG*
Ga0134085_104981541	3300015359	Grasslands Soil	VKNLLILAATVAAALSVGVATSGATPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC*
Ga0132256_1003442822	3300015372	Arabidopsis Rhizosphere	MSKVLILAAMIAATLGISVGTADARTPTPNGYCGAYNMVQAWPGGGANVPDGGGMEHAMTVNNTNGNDGMSTAVGNSAC*
Ga0132255_1031688212	3300015374	Arabidopsis Rhizosphere	MSKVLILAAMIAATLGISVGTADARTPTPNGYCGAYNMVRAWPGGGANVPDGGGMQHAMTVNTTNN
Ga0132255_1035554781	3300015374	Arabidopsis Rhizosphere	MSKVLIVAATIVAALGIGVSTAAARTPTPNGYCGAYNMVQAWPGGGANVPDGGGMEHAMTVNNTNGNDGMSTAVGNSAC*
Ga0184623_100597002	3300018056	Groundwater Sediment	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVQAWPGGGANVPDGGGMQNAMSVDNANGNTGMSTAVGNSACG
Ga0184640_102253251	3300018074	Groundwater Sediment	VKNLLILAATVAAALSVGVATSGATPETPNGYCGAANMLNAWPGGGANVPTGGGMQNAMTVNNANGNNGMFGAVGATAC
Ga0066667_109562602	3300018433	Grasslands Soil	MKKVLILAATITAALSVGVATSAATPTTPGGYCGALNMIHAWPGGGANVPDGGGMENAMSVNNANGNTGMFTAVGNSACG
Ga0066662_111294951	3300018468	Grasslands Soil	ALSVGVATSAATPTTPGGYCGALNMLHAWPGGGANVPDGVGMENAMSVNNANGNTGMFTAVGNSACG
Ga0066662_114231842	3300018468	Grasslands Soil	VKRPLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC
Ga0184647_14251771	3300019263	Groundwater Sediment	TEMNKVLILAATIAATLGISVGTADARTPTPNGYCGAYNMVQAWPGGGANVPDGGGMEHAMTVDNANGNTGMDTAVGNSAC
Ga0190264_101508624	3300019377	Soil	VKNLLILAATAVAALTIGVATAGATPETPNGYCGAANMLKAWPGGGANVPDGGGMQHAMTVNNTNGNNGMFGAVDASAC
Ga0193751_10294553	3300019888	Soil	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVNNANGNAGMATAVGNSACG
Ga0197907_101194491	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMLQAWPGGGANVPDGGGMQNAMSVDNANGNTGMFTAVGASAC
Ga0209431_103021331	3300025313	Soil	VRNLLILAATVAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNDGMFGAVGATTC
Ga0209431_105366841	3300025313	Soil	VKNLLILAATAAAALTIGVATSSAAPETPNGYCGAANMLNAWPGGGANVPTGGGMQNAMTVNNANGNNGMFGAVGNTAC
Ga0209640_110036891	3300025324	Soil	AATVAAALSVGVATSGATPETPNGYCGAANMLNAWPGGGANVPNDGGMQNAMTVNNANGNDGMFGAVGATTC
Ga0209341_110761141	3300025325	Soil	RRLQAANNKEDKVKNLLILAATAAAALTIGVATSSAAPETPNGYCGAANMLNAWPGGGANVPTGGGMQNAMTVNNANGNNGMFGAVGNTAC
Ga0207705_110354722	3300025909	Corn Rhizosphere	VKKLLILAATTAAALSVGVATSGATSETPNGYCGAANMLNAWPGGGANVPSGGGMQNAMTVNNPNGNSGMFGAVGATAC
Ga0207684_100148706	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLLILAAAFAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPDGGGMRHAMTVNNANGNNGMFGAVGRTAC
Ga0207707_107049142	3300025912	Corn Rhizosphere	MKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLRAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG
Ga0207663_105260252	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRNLLILAATVAAALNVGVATSGATPETPNGYCGAANMLNAWPGGGANVPIGGGMQNAMTVNNPNGNSGMFAAVGATAC
Ga0207646_102172811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLILAATIASALSVAVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNAGMSRAVGNSACG
Ga0207691_110576931	3300025940	Miscanthus Rhizosphere	MNKVLILAATIAATLGISVGTADARTPTPNGYCGALNMVQAWPGGGANVPDGRGMQHAMTVDNANGNDGMSTAVGNSAC
Ga0209761_11657692	3300026313	Grasslands Soil	VKRLLILAATLAAALSVGVATSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC
Ga0209160_10838603	3300026532	Soil	MKKVLILAATVAAALSVGVATSAATPTTPNGYCGALNMLQAWPGGGANVPDGGGMQKAMSVDNANGNAGMSTAVGNSACG
Ga0209056_101182474	3300026538	Soil	MKKILILAATIAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMSVNNANGNAGMSTAVGNSACG
Ga0209590_110039811	3300027882	Vadose Zone Soil	DEMKKVLILAATVAAALSVGVATSAATPTTPGGYCGALNMVHAWPGGGANVPDGGGMENAMTVDNANGNTGMFTAVGASAC
Ga0299907_1000137610	3300030006	Soil	VRKVIATNKEDKVRRLLILAATLAAVLSVGVAPSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVDATAC
Ga0170824_1182226212	3300031231	Forest Soil	VKNLLVLAATAAAALTIGVATSGAAPETPNGYCGAANMLNAWPGGGANVPAGGGMQNAMTVNNANGNNGMFGAVGATAC
Ga0308176_126128741	3300031996	Soil	PPTRPPYNKLGLTPAARAAAARRAGAPTWPAPPTTPGGYCGALNMLQAWPGGGANVPDGGGMQNAMSVDNANGNTGMFTAVGASAC
Ga0307471_1042944892	3300032180	Hardwood Forest Soil	VKRLLILAATLAAALSVGVTTSGAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGRTAC
Ga0214471_114110972	3300033417	Soil	VRNLLILAATVAVALSVGVATSAAAPETPNGYCGAANMLNAWPGGGANVPNGGGMQNAMTVNNANGNNGMFGAVGATAC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079030

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences