Metagenome Family F079028

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079028
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	137 residues
Representative Sequence	MASGNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRYLDDDDGGLQPPRAALAVTTFSIEGARLHACVVKEPHAATETSAGGADVLARVASGFTRLLAQ
Number of Associated Samples	102
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.18 %
% of genes near scaffold ends (potentially truncated)	43.10 %
% of genes from short scaffolds (< 2000 bps)	84.48 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.862 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.621 % of family members)
Environment Ontology (ENVO)	Unclassified (36.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.78% β-sheet: 18.13% Coil/Unstructured: 35.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00069	Pkinase	2.59
PF00756	Esterase	1.72
PF13828	DUF4190	1.72
PF06724	DUF1206	1.72
PF13515	FUSC_2	1.72
PF08448	PAS_4	1.72
PF00457	Glyco_hydro_11	0.86
PF09206	ArabFuran-catal	0.86
PF07637	PSD5	0.86
PF12697	Abhydrolase_6	0.86
PF13622	4HBT_3	0.86
PF01618	MotA_ExbB	0.86
PF09365	DUF2461	0.86
PF13289	SIR2_2	0.86
PF10503	Esterase_PHB	0.86
PF00150	Cellulase	0.86
PF00589	Phage_integrase	0.86
PF03485	Arg_tRNA_synt_N	0.86
PF10851	DUF2652	0.86
PF00544	Pectate_lyase_4	0.86
PF01751	Toprim	0.86
PF07007	LprI	0.86
PF13620	CarboxypepD_reg	0.86
PF01522	Polysacc_deac_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	10.34
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.86
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.86
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.86
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.86
COG3866	Pectate lyase	Carbohydrate transport and metabolism [G]	0.86
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
All Organisms	root	All Organisms	49.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
cellular organisms	root	All Organisms → cellular organisms	49.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	23.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	23.28 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	18.10 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.45 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.86 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	11.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.45 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.86 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.86 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	11.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.45 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.86 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.86 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	11.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.45 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.86 %
Chondromyces	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces	0.86 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.86 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	11.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.45 %
Frankia sp. EUN1f	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	0.86 %
Chondromyces apiculatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	0.86 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004153\|Ga0063455_101641015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	508	Open in IMG/M
3300004156\|Ga0062589_101288884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	705	Open in IMG/M
3300004463\|Ga0063356_100039755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4634	Open in IMG/M
3300005093\|Ga0062594_102135949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	603	Open in IMG/M
3300005173\|Ga0066822_1010630	Not Available	596	Open in IMG/M
3300005329\|Ga0070683_100000433	All Organisms → cellular organisms → Bacteria	29055	Open in IMG/M
3300005329\|Ga0070683_100452008	Not Available	1226	Open in IMG/M
3300005337\|Ga0070682_100422932	Not Available	1013	Open in IMG/M
3300005340\|Ga0070689_101162537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	692	Open in IMG/M
3300005343\|Ga0070687_100071699	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300005354\|Ga0070675_100065903	All Organisms → cellular organisms → Bacteria → Proteobacteria	2995	Open in IMG/M
3300005354\|Ga0070675_100658533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	952	Open in IMG/M
3300005355\|Ga0070671_100778670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	832	Open in IMG/M
3300005364\|Ga0070673_100061646	All Organisms → cellular organisms → Bacteria → Proteobacteria	2976	Open in IMG/M
3300005364\|Ga0070673_100199067	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300005365\|Ga0070688_100757338	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005367\|Ga0070667_100359335	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005434\|Ga0070709_10226343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300005435\|Ga0070714_102321723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	522	Open in IMG/M
3300005439\|Ga0070711_100448960	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005441\|Ga0070700_101025453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	680	Open in IMG/M
3300005466\|Ga0070685_11511902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	518	Open in IMG/M
3300005518\|Ga0070699_101961160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	535	Open in IMG/M
3300005530\|Ga0070679_101737966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	572	Open in IMG/M
3300005535\|Ga0070684_100979444	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005539\|Ga0068853_101900090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	577	Open in IMG/M
3300005543\|Ga0070672_101598635	Not Available	585	Open in IMG/M
3300005546\|Ga0070696_101628930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	555	Open in IMG/M
3300005564\|Ga0070664_101886380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	567	Open in IMG/M
3300005577\|Ga0068857_101901958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	583	Open in IMG/M
3300005615\|Ga0070702_101814764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	510	Open in IMG/M
3300005616\|Ga0068852_100048213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3639	Open in IMG/M
3300005836\|Ga0074470_10038642	Not Available	1515	Open in IMG/M
3300005836\|Ga0074470_11612498	All Organisms → cellular organisms → Bacteria → Proteobacteria	4467	Open in IMG/M
3300006028\|Ga0070717_10170823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1891	Open in IMG/M
3300006175\|Ga0070712_100559718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	964	Open in IMG/M
3300006846\|Ga0075430_100971735	Not Available	700	Open in IMG/M
3300009098\|Ga0105245_12385584	Not Available	582	Open in IMG/M
3300009147\|Ga0114129_11577287	Not Available	804	Open in IMG/M
3300009168\|Ga0105104_10413238	Not Available	751	Open in IMG/M
3300010337\|Ga0134062_10767385	Not Available	513	Open in IMG/M
3300010362\|Ga0126377_13433260	Not Available	512	Open in IMG/M
3300010398\|Ga0126383_10553137	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300010399\|Ga0134127_12049300	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010399\|Ga0134127_13295373	Not Available	528	Open in IMG/M
3300010401\|Ga0134121_12428573	Not Available	565	Open in IMG/M
3300010403\|Ga0134123_11214294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	785	Open in IMG/M
3300012231\|Ga0137465_1236666	Not Available	542	Open in IMG/M
3300012353\|Ga0137367_10074001	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300012357\|Ga0137384_10039225	All Organisms → cellular organisms → Bacteria	3905	Open in IMG/M
3300012915\|Ga0157302_10201101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300012958\|Ga0164299_11304791	Not Available	555	Open in IMG/M
3300012985\|Ga0164308_11849311	Not Available	563	Open in IMG/M
3300014325\|Ga0163163_11879792	Not Available	659	Open in IMG/M
3300014325\|Ga0163163_12102195	Not Available	624	Open in IMG/M
3300014968\|Ga0157379_11720836	Not Available	615	Open in IMG/M
3300014969\|Ga0157376_11376474	Not Available	737	Open in IMG/M
3300015077\|Ga0173483_10385970	Not Available	714	Open in IMG/M
3300015371\|Ga0132258_10257968	Not Available	4266	Open in IMG/M
3300015371\|Ga0132258_10339789	All Organisms → cellular organisms → Bacteria	3709	Open in IMG/M
3300015374\|Ga0132255_101041151	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300015374\|Ga0132255_103071428	Not Available	712	Open in IMG/M
3300016387\|Ga0182040_11840349	Not Available	519	Open in IMG/M
3300018067\|Ga0184611_1253352	Not Available	622	Open in IMG/M
3300018083\|Ga0184628_10053718	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300018469\|Ga0190270_13262644	Not Available	514	Open in IMG/M
3300018476\|Ga0190274_11752329	Not Available	715	Open in IMG/M
3300018476\|Ga0190274_13220912	Not Available	549	Open in IMG/M
3300018481\|Ga0190271_12334062	Not Available	639	Open in IMG/M
3300021403\|Ga0210397_11104962	Not Available	616	Open in IMG/M
3300022756\|Ga0222622_10786666	Not Available	694	Open in IMG/M
3300024179\|Ga0247695_1053800	Not Available	589	Open in IMG/M
3300024249\|Ga0247676_1024712	Not Available	956	Open in IMG/M
3300024254\|Ga0247661_1015940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1291	Open in IMG/M
3300025907\|Ga0207645_10376978	Not Available	952	Open in IMG/M
3300025907\|Ga0207645_11185922	Not Available	513	Open in IMG/M
3300025918\|Ga0207662_10018801	All Organisms → cellular organisms → Bacteria → Proteobacteria	3924	Open in IMG/M
3300025921\|Ga0207652_11173792	Not Available	669	Open in IMG/M
3300025926\|Ga0207659_10130154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1941	Open in IMG/M
3300025926\|Ga0207659_10628894	Not Available	916	Open in IMG/M
3300025926\|Ga0207659_11326832	Not Available	617	Open in IMG/M
3300025930\|Ga0207701_10012910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8147	Open in IMG/M
3300025930\|Ga0207701_10738162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300025931\|Ga0207644_10659231	Not Available	871	Open in IMG/M
3300025940\|Ga0207691_10195154	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300025944\|Ga0207661_10011102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6511	Open in IMG/M
3300025944\|Ga0207661_10404009	Not Available	1239	Open in IMG/M
3300025945\|Ga0207679_11735939	Not Available	571	Open in IMG/M
3300025960\|Ga0207651_11282162	Not Available	658	Open in IMG/M
3300026023\|Ga0207677_10228644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1497	Open in IMG/M
3300026041\|Ga0207639_10842706	Not Available	856	Open in IMG/M
3300026095\|Ga0207676_12462514	Not Available	517	Open in IMG/M
3300026116\|Ga0207674_11063040	Not Available	779	Open in IMG/M
3300026142\|Ga0207698_10125097	All Organisms → cellular organisms → Bacteria → Proteobacteria	2185	Open in IMG/M
3300028379\|Ga0268266_10683320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	989	Open in IMG/M
3300028380\|Ga0268265_12358519	Not Available	539	Open in IMG/M
3300028666\|Ga0265336_10085860	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300028768\|Ga0307280_10035989	Not Available	1500	Open in IMG/M
3300028800\|Ga0265338_10002666	All Organisms → cellular organisms → Bacteria → Proteobacteria	26252	Open in IMG/M
3300031232\|Ga0302323_101627458	Not Available	729	Open in IMG/M
3300031238\|Ga0265332_10149697	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031239\|Ga0265328_10221201	Not Available	721	Open in IMG/M
3300031250\|Ga0265331_10163835	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031366\|Ga0307506_10509199	Not Available	511	Open in IMG/M
3300031538\|Ga0310888_10287803	Not Available	935	Open in IMG/M
3300031548\|Ga0307408_100831623	Not Available	840	Open in IMG/M
3300031902\|Ga0302322_100437526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1509	Open in IMG/M
3300031910\|Ga0306923_10541075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1313	Open in IMG/M
3300031911\|Ga0307412_11060538	Not Available	719	Open in IMG/M
3300031940\|Ga0310901_10416888	Not Available	588	Open in IMG/M
3300031945\|Ga0310913_11264468	Not Available	512	Open in IMG/M
3300032000\|Ga0310903_10375362	Not Available	718	Open in IMG/M
3300032896\|Ga0335075_11110239	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300033004\|Ga0335084_11845792	Not Available	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.48%
Host-Associated	Host-Associated	40.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.45%
Plants	Host-Associated → Plants	40.52%
Aquatic	Environmental → Aquatic	6.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.07%
Sediment	Environmental → Aquatic → Sediment	5.17%
Peat	Environmental → Terrestrial → Peat	1.72%
Roots	Host-Associated → Plants → Roots	1.72%
Freshwater	Environmental → Aquatic → Freshwater	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.31%
Loam	Environmental → Terrestrial → Soil → Loam	20.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.59%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.86%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063455_1016410151	3300004153	Soil	MASRNERVREGRPSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGSHEEIAARLPMLADPVQRRFLDEDDAELHAPRSMSTVTTFSIAGAKLHACAVREPDAVTDTSAGGAEVLARVASGFTRLLAQ*
Ga0062589_1012888842	3300004156	Soil	MASRTQRAKEGRMPERRNRRSGRLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQHHSLPDDDEGLHLAGATLTVTTFSIEGATLHACAVKESDAATETTEGDGEILARVASGFTRLLAQ*
Ga0063356_1000397556	3300004463	Arabidopsis Thaliana Rhizosphere	MASRNKRVNQGRLSERRRLRSGCLADALRLQLEACREEEGLAAIVVSDELGFCVAHAGGDGNHEELAAQLPMLADPARESVDDDDGVLQPGAALAVTTFSAAGARLHACTVKDADAAAETDESDAEVLARVASGFTRLLAQ*
Ga0062594_1021359491	3300005093	Soil	MASGKKRVRVNEGRLPERRHRRSGLLADALRLQLEACREAEGLASIVVSDELGFCVAHSGGDGNHDELAALLPMLADPAQHGALDDDDDALAAPHGAMAISTFSIAGGKLHACAVKESDDATEADEGDTEVLARVASGFTRLLAQ*
Ga0066822_10106302	3300005173	Soil	SGRLAEALRLQLDVCREKEGLAAIVVSDEQGFCVAHSGGDGSHDELAALLPILADPAQRRSLDEDDSLPPPPELLAVTTFSIAGARFHACAVNQPDAAPKTSAGGAEILARVASGFSRLLAE*
Ga0070683_10000043314	3300005329	Corn Rhizosphere	MASRNERARVRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHGALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ*
Ga0070683_1004520082	3300005329	Corn Rhizosphere	MANVRVKKGRLSERRRRRSGCLADALRLQLDACREAEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPVQRQVLDDDDGGLHPPRAALAVTTFSIPGARLHVCAVKQPGAATEMSARGSEILARVASGFTRLLAQ*
Ga0070682_1004229321	3300005337	Corn Rhizosphere	MASRNKRVKEGRMSERRRRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGNHEELAAHLPMLADPAQRGSLDDDDGGRQPPRAALAVTTFSIAGARLHACTVKEPHATTETTSDAELLARVADGFTRLLAQ*
Ga0070689_1011625371	3300005340	Switchgrass Rhizosphere	MASGNERVKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGGGGHDELAARLPMLADPAQRGPLPDDDEGLHLAHAALAVTTFSIEGATLHACAVKEPDAAEGTPAGDGEVLARVASGFTRMLAQ*
Ga0070687_1000716991	3300005343	Switchgrass Rhizosphere	ADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGNHDELAAQLPMLADPQRRSFDDEDSALPPGDLAVATFSIEGARLHACTVKEPDAASETSADDGEVLARVASGFTRLLAQ*
Ga0070675_1000659032	3300005354	Miscanthus Rhizosphere	MASRNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHAGGDGSHDELAARLPMLADPAQRWPVDDDDAGELQPPRAALSVATFSIEGARLHACVVKETATATESSAGGDEALARVASGFTRLLAQ*
Ga0070675_1006585331	3300005354	Miscanthus Rhizosphere	MASRNERARVRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHSALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ*
Ga0070671_1007786701	3300005355	Switchgrass Rhizosphere	MASRNERVKEGRPSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGSHDEIAARLPLLADPVQRRFVDEEDGEFDPPRSALAVTTFSIAGATLHACVVKEPEAATQTSAGRAEVLARVASGFTRLLAQ*
Ga0070673_1000616461	3300005364	Switchgrass Rhizosphere	MASRNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHAGGDGSHDELAARLPMLADPAQRWPVDDDDAGELQPPRAALSVATFSIEGARLHACVVKETATATESSAGGDEALARVASG
Ga0070673_1001990673	3300005364	Switchgrass Rhizosphere	LRLQLEACREDEGLAAIVVSDELGFCVAHSGGGGGHDELAARLPMLADPAQRGPLPDDDEGLHLAHAALAVTTFSIEGATLHACAVKEPDAAEGTPAGDGEVLARVASGFTRMLAQ*
Ga0070688_1007573382	3300005365	Switchgrass Rhizosphere	PMGAMTRKKRAIEGRLSERRIRRSGCLADALRLQLEACREAEGLAAIVVSDEFGCCVAHAGGDGSHDQLAAHLPMLADPLQRQYLNADDAALLPAPGSVTFTTFPIAGGKLHACAVVAPESALARTDGAAVLARVASGFTRLLAE*
Ga0070667_1003593351	3300005367	Switchgrass Rhizosphere	VFRIDATRFCVAPRDGLNWLGTMASGNERDKPGRMSERRRRRNGRLADALRLQLEACREDEGLAAIVVADELGFCVAHSGGDGNHDELAARLPMLADPAQRGYLDDDAGRLLAVTTFSIPGATLHVGAVQNPDAAANASTAEVLARVASGF
Ga0070709_102263432	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAPRNERVREGRPSERRYRRSGRLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAEASADGAEVLARVVSGFSRLLSR*
Ga0070714_1023217231	3300005435	Agricultural Soil	GDERVKAGRPSERRNRRSGRLADALRLQLEACREDEGLAAIVVSDEHGFCVAHAGGDGKHEELAARLPMLADPAQHRAFDDDDGEFQPKRAALAVMTFSIAGARLHACVVKKPDAGTEANDGGAEVLARVVSGFSRLLAQ*
Ga0070711_1004489602	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MASGDERVKAGRPSERRNRRSGRLADALRLQLEACREDEGLAAIVVSDEHGFCVAHAGGDGKHEELAARLPMLADPAQHRAFDDEDGEFQPKRAALAVMTFSIAGARLHACVVKKPDAGTEANDGGAEVLARVVSGFSRLLAQ*
Ga0070700_1010254531	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ADALRLQLEACREDEGLAAIVVSDELGFCLAHSGGDGSHDELAAHLPMLADPAQSRALDDDDGGLGQPRAALAVTTFSIEGARFHACAVKEAEAATETSAGSAEVLARVASGFTRLLAQ*
Ga0070685_115119021	3300005466	Switchgrass Rhizosphere	MASGNERVKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDEFGFRVAHSGGDGSHDELAAQLPMLADPARRSPGLQPPRTALAVTTFSVAGATLHACVMKEPDATPATRADG
Ga0070699_1019611601	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGATTQNKSAIEGRLSERRNRRSGCLADALRLQLETCREAEGLAAIVVSDEFGFCVAHAGGDGSHDELAAHLPMLADPLQRQSLSDDQVALLPAPDSVTVSTFPISGGRLHACAVAAPDGALASTRAAALARVASGFTR
Ga0070679_1017379661	3300005530	Corn Rhizosphere	RRRRSGCLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAEASADGAEVLARVVSGFSRLLSR*
Ga0070684_1009794441	3300005535	Corn Rhizosphere	LRLQLDACREEEGLAAIVVADELGFCVAHSGGDGSHEEIAARLPMLADPAQRRCLEDDDSALQPPPASLAVATFSIAGDKLHACAVKERDAATGAGDAEILARVASGFTRLLAQ*
Ga0068853_1019000901	3300005539	Corn Rhizosphere	MASGSERVKEGPGTERRHRRSACLADALRLQLDACREDEGLAAIVVSDEHGFCVAHSGGDGGHDELAAQLPMLADPALRRSFEDDDDELQAPRADLAVTTFSVGGATLHACAVKESEAGAEPSAEGHELLARVASGFTRLLAQ*
Ga0070672_1015986351	3300005543	Miscanthus Rhizosphere	MASGNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRYLDDDDGGLQPPRAALAVTTFSIEGARLHACVVKEPHAATETSAGGADVLARVASGFTRLLAQ
Ga0070696_1016289301	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MASRNKRVKEGRLSERRRLRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHEDLAAWLPMLADPARRRGLDDDDGGAQPPRPALAVTTFSIDGGKLHACALTEPDATTETRAGDGEVLARVASGFTRLLAQ*
Ga0070664_1018863801	3300005564	Corn Rhizosphere	PRPTKTYTAYMPAFDGTRGGTMASRNESVTEGRPFERRHRRSDCLADALRLQLDACREDEGLAAIVVSDELGFCVAHSGGDGNHEELAAHLPMLADPAQRGSLDDDDGGRQPPRAALAVTTFSIAGARLHACTVKEPHATTETASDAELLARVADGFTRLLAQ*
Ga0068857_1019019581	3300005577	Corn Rhizosphere	MASRTQRAKEGRMPERRNRRSGRLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRGYLDDDAGRLLAVTTFSIPGATLHVGAVQNPDAAANASTAEVLARVASGFTRLLAQ*
Ga0070702_1018147641	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MASGNERVKEGRPTERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGGGGHDELAARLPMLADPAQRGPLPDDDEGLHLAHAALAVTTFSIEGATLHACAVKEPDAAEGTPAGDGEVLARVASGFTRMLAQ*
Ga0068852_1000482135	3300005616	Corn Rhizosphere	MATGSERVNEGRGTERRHRRSACLADALRLQLDACREDEGLAAIVVSDEHGFCVAHSGGDGGHDELAAQLPMLADPALRRSFEGDDDELQAPRADLAVTTFSVGGATLHACAVKESEAGAEPSAEGHELLARVASGFTRLLAQ*
Ga0074470_100386421	3300005836	Sediment (Intertidal)	MGAMNDRATEDRPSERRNRRSTCLADALRFQLDACRQAEGLAAIVVSDELGFCVAYSGGDGTHEELAARLPMLADPARRQLCEDAVDEETPSSPSALRVTTFPISGTMLHVCAVGAPQAGAEDDAGVAVLARVASGFTRLLA*
Ga0074470_116124984	3300005836	Sediment (Intertidal)	MKDQPSERRHRRSGRLADALRLQLEACRENEGLAAIVVSDDLGFCVAHSGGDGSHDELAARLPMLADPRCRSLDDDDGGFQVPLADLSLATFSIAGARLHACAVKEPHAGTETSAGGADVLARVASGFTRLLAE*
Ga0070717_101708231	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAPRNERVREGRPSERRYRRSGRLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAEASADGAEVLARVVSGFSR
Ga0070712_1005597182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAPRNERVREGRPSERRYRRSGRLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAEASADGAEVLARVVSGFS
Ga0075430_1009717351	3300006846	Populus Rhizosphere	CLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPAQRGYLDDDDGGLQPLRAALAVTTFSIEGARLHACAVKEEDASTETSADSAEVLARVASGFTRLLAQ*
Ga0105245_123855842	3300009098	Miscanthus Rhizosphere	DALRLQLEACREEEGLAAIVVSDELGFCVAHAGGDGSHDELAAQLPMLADPQRRSFDDEDSALPPGDLAVATFSIEGARLHACTVKEPDAASETSADDGEVLARVASGFTRLLAQ*
Ga0114129_115772871	3300009147	Populus Rhizosphere	MGSGNERVKEGRLPERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQLWPLHDDDAGLQLARAALAVTTFSIAGATLHACTVKEPDTATEKSAGGTEVLARVASGFTRLLAQ*
Ga0105104_104132381	3300009168	Freshwater Sediment	MPKEARLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHAGGDGSHDELAARLPMLADPAQLWPLQDDDAGLQLARAALAVTTFSIAGTTLHACAVKEPDAATEKSAGGTEVLARVASGFTRLLAQ*
Ga0134062_107673851	3300010337	Grasslands Soil	MASGNERAKEDRSSERRHRRSGCLADALRLQLEVCRENEGLFAIVVSDELGFCVAHSGGDGRHDELAARLPMLVDPAQRRYLDEDDDGGLQPPRAAMAVTTFSIAGATLHACVVKQPDAAKGTSPAEILARVATSFTRLLSD*
Ga0126377_134332601	3300010362	Tropical Forest Soil	MASGNKRVKDGRRSERRQRRSGCLADALRLQLEACRKDEDLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRALDDDDGGLQPPRAALAVTTFSIADAKLHACAVKSDATTESGAESLARVASGFT
Ga0126383_105531372	3300010398	Tropical Forest Soil	MASENERVKKRRPSERRQRRSGCLADALRLQLEACRKDEGLAAIVVSDELGFCVAHSGGDGRHDELAARLPMLADPAQRRALEDDDRDDDGGLQPPPAALAVMTFTIAGAKLYACAVKGPDAAPETSADGAEVLARVAGAFTRLLAQ*
Ga0134127_120493001	3300010399	Terrestrial Soil	MPDGRPSERRQRRSARLAEALRLQLDACREDEGLAAIVVSDELGFCVAHSGGDGSHEDLAAWLPMLADPARRRGLDDDDGGAQPPRPALAVTTFSIDGGKLHACALTEPDATTETRGGDGEVLARVASGFTRLLAQ*
Ga0134127_132953731	3300010399	Terrestrial Soil	TVKNDKGEVRVLEVERRRLRSGCLADALRLQLEACREEEGLAAIVVSDELGFCVAHAGGDGSHDELAAQLPMLADPAQRRFLDGDEGRLPPQRALAVTTFSIEGAKLHACAVKKPEAANETSAGGDEILARVASGFTRLLAQ*
Ga0134121_124285731	3300010401	Terrestrial Soil	MPAGDEGAKKERPSERRQRRSGGLADALRLQLEACREEEGLSAIVVSDELGFCVAHSGGDGSHDELAARLPMLVDPVQRRLLDDDDGGLQPPRAALAVATFTIAGTTLHACAVKRADAAIQTSAHDAEILARVASGFTRLLAK*
Ga0134123_112142941	3300010403	Terrestrial Soil	MASENYLVKEGRRSERRHRRSECLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHEDLAAWLPMLADPARRRGLDDDDGGAQPPRPALAVTTFSIDGGKLHACALTEPDATTETRAGDGEVLARVASG
Ga0105246_116283481	3300011119	Miscanthus Rhizosphere	AQGASRRWASCAKRFFASQPTRTYIAYIMPIGRHFEEAPMASRNERARVRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHGALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ*
Ga0137465_12366661	3300012231	Soil	MASRNARAKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGNGSHDELAARLPMLADPAQRRFLDDDDEGPQPAGAVLAVTTFSIAGATLHACAVKEPDAA
Ga0137367_100740012	3300012353	Vadose Zone Soil	MASGNERVREGRLSERRHRRNGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGSHDEIAARLPMLADPVQRRFLDEDDGELHAPRSALAVTTFSIAGATLHVCAVKEPDATTDTSAGGAEVLARVASGFTRLLAQ*
Ga0137384_100392253	3300012357	Vadose Zone Soil	MASGNERVKESRRSEQRHRRSGCLADALRLQLDACRENGGLAAIVVADEFGFCVAHSGGDGSHDDLAARLPMLADPAQHLDDDDCGLQPPPAALAVTTFSIAGARLYACAVKESDAATGTRADGAEVLARVASGFTRLLSQ*
Ga0157302_102011012	3300012915	Soil	VRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHGALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ*
Ga0164299_113047911	3300012958	Soil	MASRNKRVNQARLSERRRLRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHTSGGASPEELAARLPMLADPAQRGSLDEDDGELHRPRAALAITTFSIPGARLHVCAVRKPDATADTSGAEMLARVASGFTRLLAQ*
Ga0164308_118493111	3300012985	Soil	MASRNKRAKESRPSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHSGGDGNHDELAARLPMLADPAQHGALDDDDDALAAPHGAMAISTFSIAGGKLHACAVKESDDA
Ga0163163_118797921	3300014325	Switchgrass Rhizosphere	MASRNERVNQGRLPERRNRRSGRLADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGSHDELAARLPMLADPAQRWPVDDDDAGELQPPRAALSVATFSIEGARLHACVVKETATESSAG
Ga0163163_121021951	3300014325	Switchgrass Rhizosphere	PFERRHRRSDCLADALRLQLDACREDEGLAAIVVSDELGFCVAHSGGDGNHEELAAHLPMLADPAQRGSLDDDDGGRQPPRAALAVTTFSIAGARLHACTVKEPHATTETTSDAELLARVADGFTRLLAQ*
Ga0157379_117208361	3300014968	Switchgrass Rhizosphere	MASRNERVTEGQPFERRHHRSECLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGNHDELAAQLPMLADPAQRRALDERCDDAELHPPRAALTVTTFSIPGATLHACAVKQPDAAAETSAGGAEVFARVASGFARLLAQ*
Ga0157376_113764742	3300014969	Miscanthus Rhizosphere	MAYGNERVKEGRPSERRQRRSGLLADALRLQLEACRDDKGLAAIVVSDELGFCVAHAGGDGSHDEIAARLPLLADPVQRRFVDEEDGEFDPPRSALAVTTFSIAGATLHACVVKEPEAATQTSAGRAEVLA
Ga0173483_103859702	3300015077	Soil	MASRNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDDVGFCVAHAGGDGSHDELAARLPMLADPAQRRYLDEDDGDLQPPRAALSLATFSIEGARLHACVVKETATESSAGGDEALA
Ga0132258_102579683	3300015371	Arabidopsis Rhizosphere	MASRNEPVTEGRPFERRHRRSGCLADALRLQLDACREDEGLAAIVVSDELGFCVAHSGGDGNHEELAAHLPMLADPAQRGSLDDDDGGIQPPRAALSVTTFSIAGARLHACAVKEPHAATESAGDAELLARVADGFTRLLAQ*
Ga0132258_103397892	3300015371	Arabidopsis Rhizosphere	MPPRNKRVKEGRMPERRRRRSGCLADALRLQLETCREDEGLAAIVVSDDLGFCVAHSGGDGSHDELAARLPMLADPARRGSLDDDDGGPQPPRTSMAVTTFSIEGAKLHVCFVKEHDAATETSADGADVLARVANGFTRLLAQ*
Ga0132255_1010411511	3300015374	Arabidopsis Rhizosphere	LRLPLEACREDAKLDAIVVSDELGFCVAHAGGDGSHEELAARLPMLVDPAQRRFLDDDDAEVQPSQADLAVTTFSAAGARLHACAVNRPDAETSAGGANVLDRVASGFSRLLAQ*
Ga0132255_1030714282	3300015374	Arabidopsis Rhizosphere	MASGNKRVKEGRLSERRNRRSGCLADALRLQLEACREEEGLAAIVVSDELGFCVAHAGGDGSHDELAARLPMLADPAQRQCLDDDDGELQPPRAALEVTTFSIEGATLHVCAVKEPEAVEETSAPGSAALARVASGFTRLLAQ*
Ga0182040_118403492	3300016387	Soil	RSGCLADALRLQLEACREAEGLAAIVVSDELGFCVAHSGGGGNHDELAAWLPMLADPEQSESLHDEGVLHTPRAALAVTTFSIGSTRLHACAVREPSAATEADAGGDEVLARVASGFARLLAQ
Ga0184611_12533522	3300018067	Groundwater Sediment	MASKTERVKEGRLSERRHRRSGCLADALRLQLEVCCEDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRFLDDDDGGLQPPHTAVAFATFSIPGARLHACAVTDTDNATETRSGGDEALARVASGFTRLLAQ
Ga0184628_100537182	3300018083	Groundwater Sediment	MASRTERAKEGRMPERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGGGSHDELAARLPMLADPAQHHSLPDDDEGLQLAGATLTVTTFAIEGATLHACAVKEPDAATETTAGDSEILARVASGFTRLLAQ
Ga0190270_132626442	3300018469	Soil	GCLADALRLQLEACREEEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRYLDDDDGGLQHRRAPLAVTTFSIPGARLHACVVTKPDAATATSAGGADVLARVASGFTRLLAQ
Ga0190274_117523291	3300018476	Soil	MAIGNERVKEGRPSERRHRRSDCLADALRLQLQACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRWSLDDDDGELQPPRAALAVTTFSIEGARLHACAVKQPDAATETSAGGA
Ga0190274_132209121	3300018476	Soil	ADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRYLDDDDGGLQPPGAALAVTTFSIEGARLHACVVTEPNAATATSAGGADILARVASGFTRLLAQ
Ga0190271_123340622	3300018481	Soil	MASGNERVNEGRPSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRRYLDEDDGELQPPRAAMAVTTFSIEGARLHACVVKEPDAVTEASAGGAEVLARVASGFTRLLAQ
Ga0210397_111049622	3300021403	Soil	MASGNERVKEGPSERRFRRSGCLADALRLQLEVCREDEGLAAIVVSDEHGFCVAHAGGDGNHDELAARLPMLADPARCRSFDDDDGGLQLRRAALAVVTFSIAGASLHACAVNQPDADTETSAGSAEVLARVASGFTRLLA
Ga0222622_107866661	3300022756	Groundwater Sediment	MASGNERLKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSYDELAARLPMLADPAQLWPLQDDDAGLQLARAALAVTTFSIAGTTLHACAVKEPDAATEKSAGGTEVLARVASGFTRLLAQ
Ga0247695_10538002	3300024179	Soil	MAPRNERVREGRPSERRYRRSGRLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAEASADGAEVLA
Ga0247676_10247121	3300024249	Soil	MAPRNERVREGRPSERRYRRSGRLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAGASADGAEVLARVVSGFSRLLSR
Ga0247661_10159401	3300024254	Soil	MAPRNERVREGRPSERRYRRSGRLADALRLQLEACREEERLAAIVVSDEHGFCVAHSGGDGRHEEIAARLPILADPAQRQSLDDDDGGLQPLHAVLAVTTFSIAGAKLHACVVKESGAAAGAS
Ga0207645_103769781	3300025907	Miscanthus Rhizosphere	MASRNERARVRAKEGRISERRNRRSGRLADALRLQLEACREDEGLAAIVVADELGFCVAHSGGDGNHDELAARLPMLADPAQRGYLDDDAGRLLAVTTFSIPGATLHVGAVQNPDAAANASTAEVLARVASGFTRLLAQ
Ga0207645_111859222	3300025907	Miscanthus Rhizosphere	NRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPARRWSLDDDEGELQPPRATLAVTTFSIEGARLHACAVQEPDADTETSAGGAEVLARVASGFTRLLAQ
Ga0207684_112350411	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RRADLGSSEASIRAPGMDAARRCNRFFASWPTKTYIACVAGFDGTRGGTMASGNERVKEGRPIERRHRRSGRLADALRLQLDACREDEGLAAIVVSDEVGFCVAHSGGDGSHNELAARLPMLADPAQRWSLDDDDGGLHPPRAALAVTTFSIAGARLHACAVKEPDAATETGAGGAEVLARVASGFTRLLAQ
Ga0207662_100188012	3300025918	Switchgrass Rhizosphere	MASENDLVKEGRRSERRHRRSECLADALRLQLEACREDEGLAAIVVSDELGFCLAHSGGEGSHDELAAHLPMLADPAQRRSLDDGDATLPLPGAALAVTTFSIAGATFHACAVKEPAAATETSAGGDEVLARVASGFTRLLAQ
Ga0207652_111737922	3300025921	Corn Rhizosphere	ERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPVQRHVLDDDDGDLHPPRAALEVTTFSIPGARLHVCAVKQPGAATEMSARGSEILARVASGFTRLLAQ
Ga0207659_101301542	3300025926	Miscanthus Rhizosphere	MASRNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHAGGDGSHDELAARLPMLADPAQRWPVDDDDAGELQPPRAALSVATFSIEGARLHACVVKETATATESSAGGDEALARVASGFTRLLAQ
Ga0207659_106288942	3300025926	Miscanthus Rhizosphere	MASGNERVKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGGGGHDELAARLPMLADPAQRGPLPDDDEGLHLAHAALAVTTFSIEGATLHACAVKEPDAAEGTPAGDGEVLARVASGFTRMLAQ
Ga0207659_113268321	3300025926	Miscanthus Rhizosphere	MASRNERARVRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHSALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ
Ga0207701_100129104	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MASGKKRVRVNEGRLPERRHRRSGLLADALRLQLEACREAEGLASIVVSDELGFCVAHSGGDGNHDELAALLPMLADPAQHGALDDDDDALAAPHGAMAISTFSIAGGKLHACAVKESDDATEADEGDTEVLARVASGFTRLLAQ
Ga0207701_107381622	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MASGNERVKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHSGGDGNHDELAARLPMLADPAQRWALDDDDGGLQPPRAALTFTTFSIPGAKLHACVVKEPDAATETTAGGAEVL
Ga0207644_106592312	3300025931	Switchgrass Rhizosphere	MASRNERVKEGRPSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGSHDEIAARLPLLADPVQRRFVDEEDGEFDPPRSALAVTTFSIAGATLHACVVKEPEAATQTSAGRAEVLARVASGFTRLLAQ
Ga0207691_101951542	3300025940	Miscanthus Rhizosphere	MASRNERVNEGRLSERRHRRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHAGGDGSHDELAARLPMLADPAQRWPVDDDDAGELQPPRAALSVATFSIEGARLHACVVKETATATESSAGGGEALARVASGFTRLLAQ
Ga0207661_100111026	3300025944	Corn Rhizosphere	MASRNERARVRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHGALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ
Ga0207661_104040092	3300025944	Corn Rhizosphere	MANVRVKKGRLSERRRRRSGCLADALRLQLDACREAEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPVQRQVLDDDDGGLHPPRAALAVTTFSIPGARLHVCAVKQPGAATEMSARGSEILARVASGFTRLLAQ
Ga0207679_117359391	3300025945	Corn Rhizosphere	APRPTKTYTAYMPAFDGTRGGTMASRNESVTEGRPFERRHRRSDCLADALRLQLDACREDEGLAAIVVSDELGFCVAHSGGDGNHEELAAHLPMLADPAQRGSLDDDDGGRQPPRAALAVTTFSIAGARLHACTVKEPHATTETASDAELLARVADGFTRLLAQ
Ga0207651_112821621	3300025960	Switchgrass Rhizosphere	RSLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGGGGHDELAARLPMLADPAQRGPLPDDDEGLHLAHAALAVTTFSIEGATLHACAVKEPDAAEGTPAGDGEVLARVASGFTRMLAQ
Ga0207677_102286441	3300026023	Miscanthus Rhizosphere	SRNERARVRAKEGRISERRNRRSGRLADALRLQLETCREAEGLAAIVVSDELGFCVAHAGGDGKHDELAALLPMLADPAQHGALDGDDGLQTPRAALSVATFSIAGAKLHACAVKEPDAATEPTAADAEVLARVASGFTRLLAQ
Ga0207639_108427062	3300026041	Corn Rhizosphere	MASGSERVKEGPGTERRHRRSACLADALRLQLDACREDEGLAAIVVSDEHGFCVAHSGGDGGHDELAAQLPMLADPALRRSFEDDDDELQAPRADLAVTTFSVGGATLHACAVKEPEAETEPSAEGHELLARVASGFTRLLAQ
Ga0207676_124625141	3300026095	Switchgrass Rhizosphere	MGATTQNKSAIEGRLSERRNRRSGCLADALRLQLETCREAEGLAAIVVSDEFGFCVAHAGGGGSHEQLAAHLPMLADPLQRQSLSDDQVALLPAPGSVTVSTFPISGGRLHACAVAAPDGALASTRAAVLARVASGFTRLLAE
Ga0207674_110630402	3300026116	Corn Rhizosphere	MASRTQRAKEGRMPERRNRRSGRLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRGYLDDDAGRLLAVTTFSIPGATLHVGAVQNPDAAANASTVSHNVIARCG
Ga0207698_101250972	3300026142	Corn Rhizosphere	LTEGRGTERRHRRSACLADALRLQLDACREDEGLAAIVVSDEHGFCVAHSGGDGGHDELAAQLPMLADPALRRSFEGDDDELQAPRADLAVTTFSVGGATLHACAVKESEAGAEPSAEGHELLARVASGFTRLLAQ
Ga0268266_106833202	3300028379	Switchgrass Rhizosphere	MASRNKRVKEGRLSERRRLRSGCLADALRLQLEACREDEGLAAIVVSDDLGFCVAHAGGDGSHDELAARLPMLADPAQRWPVDDDDAGELQPPRAALSVATFSIEGARLHACVVKETATATESSAGGDEALARVASGFTRLLAQ
Ga0268265_123585191	3300028380	Switchgrass Rhizosphere	MASGNERVKKGRPSERRHRRSEFLADALRLQLEACREDEGLAAIVVADELGFCVAHSGGDGNHEELAAHLPMLADPAQRGYLDDDAGRLLAVTTFSIPGATLHVGAVQNPDAAANASTAEVLARVASGFTRMLAQ
Ga0265336_100858602	3300028666	Rhizosphere	MASGNERVKEGQPSERRHRRSGCLADALRLQLEVCREDGGLTAIVVSDEHGFCVAHAGGDGDHDELAAWLPMLAAPARRGSFDGDDGGLTPRRAALAVVTFSIAGASLHACAVKEPDAGTETSAG
Ga0307280_100359891	3300028768	Soil	MASENERVKEGRPSERRHRRSGCLADALRLQLETCREDEGLASIVVSDELGFCVAHAGGDGSHDELAARLPMLADPARRQYLDDDDGELQPPRETLEITTFSIEGTRLHACAVQEPDADTSRSAGGAEVLARVASGFTRLLAQ
Ga0265338_100026663	3300028800	Rhizosphere	MASGDERVKEGQPSERRHRRSGCLADALRLQLEVCREDGGLTAIVVSDEHGFCVAHAGGDGDHDELAAWLPMLAAPARRGSFDGDDGGLTPRRAALAVVTFSIAGASLHACAVKEPDAGTETSAGGAEVLARVASGFTRLLT
Ga0302323_1016274581	3300031232	Fen	MASESDFVKKGQASERRHRRSECLADALRLQLEACRDDEGLAAIVVSDELGFCLAHSGGDGGHDELAANLPMLADPAQRPALVDDDGELRGPGAVLAITTFSIAGSRFHACAVKESAAATETSASGTDALARVASGFTRMPAE
Ga0265332_101496972	3300031238	Rhizosphere	RLADALQLQLDACREDEGLAAIVVSDEQGFCVAHSGGDGRHDELAARLPMLADPAQHQSLDDDDGLHQPRSALSVTTFSIEGARLHACVVKKPDAGAETSAVGAQVLARVASGFARLLDQ
Ga0265328_102212011	3300031239	Rhizosphere	MASENDRVKEGQTSERRHRRSECLADALRLQLDACRDDEGLAAIVVSDELGFCLAHSGGDGSHDELAAHLPMLADPAQRRSLDDDDGGLRRPCAALAVTTFSIAGARFHACALKESAAATETSAGSTDVLARVARGFTRLLAQ
Ga0265331_101638352	3300031250	Rhizosphere	MASGDERVKEGQPSERRHRRSGCLADALRLQLEVCREDGGLTAIVVSDEHGFCVAHAGGDGDHDELAAWLPMLAAPARRGSFDGDDGGLTPRRAALAVVTFS
Ga0307506_105091991	3300031366	Soil	MASGNERVTERRPPERRQRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGSHDELAARLPMLADPAQRWSLDDDDGGLQTSRASLAITTFSIAGARLHACAVQEPDAATETRAGGAEVLARVASGFTRLLAE
Ga0310888_102878032	3300031538	Soil	MASGNQRSKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPARRWSLDDDEGELQPPRATLAVTTFSIEGARLHACAVQEPDADTETSAGGAEILARVASGFTRLLAQ
Ga0307408_1008316231	3300031548	Rhizosphere	MASGKKRVKEGRMSERRNRRSGCLADALRLQLETCREEEGLAAIVVSDELGFCVAHAGGDGSHDELAARLPMLADPAQRRLLYDDDEGLQPARAALAVTTFSIAGARLHACAVEAPDAAT
Ga0302322_1004375262	3300031902	Fen	MASESDFVKKGQASERRHRRSECLADALRLQLEACRDDEGLAAIVVSDELGFCLAHSGGDGGHDELAANLPMLADPAQRPALVDDDGELRGPGAVLAITTFSIAGSRFHACAVKESAAATETSASGTDALARVASGFTRMLAE
Ga0306923_105410752	3300031910	Soil	PFVLEALRLQLEACREDEGLAAIVVADELGFCVAHSGGGGNHDELAAWLPMLADPEQSESLHDEGVLHTPRAALAVTTFSIGSTRLHACAVREPSAATEADAGGDEVLARVASGFARLLA
Ga0307412_110605381	3300031911	Rhizosphere	MASGKKRVKEGRMSERRNRRSGCLADALRLQLETCREEEGLAAIVVSDELGFCVAHAGGDGSHDELAARLPMLADPAQRRLLYDDDEGLHPARAALAVTTFSIAGARLHACAVEAPDAATTPRADGAEILAR
Ga0310901_104168881	3300031940	Soil	MASGNQRSKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHAGGDGNHDELAAQLPMLADPQRRSFDDEDGALPPGDLAVATFSIEGARLHACTVKEPDAASETSADDGEVLARVASGFTRLLAQ
Ga0310913_112644681	3300031945	Soil	LRLQLEACREDEGLAAIVVADELGFCVAHSGGGGNHDELAAWLPMLADPEQSESLHDEGVLHTPRAALAVTTFSIGSTRLHACAVREPSAATEADAGGDEVLARVASGFARLLAQ
Ga0310903_103753621	3300032000	Soil	MASGNQRSKEGRLSERRNRRSGCLADALRLQLEACREDEGLAAIVVSDELGFCVAHSGGDGGHDELAARLPMLADPARRWSLDDDEGELQPPRAALAVTTFSIEGARLHACAVQEPDADTETSAGGAEVLARVASGFTRLLAQ
Ga0335075_111102391	3300032896	Soil	MAIGTQRANGAERRRHRSACLADALRLQLEACREDERLAAIVVADELGFCVAHSGGDGTHEEIAARLPMLADPVLRRSLHDDDGGGLQAALAITTFTIAGARLHACAVKQPGAQASPTGAAVLARVASGFTRLLAR
Ga0335084_118457921	3300033004	Soil	MASGNERAKEGRSSERRQRRSGCLADALRLQLDACREDEGLAAIVVSDEHGFCVAHSGGDGSHDEIAAHLPALADPAHRGSLDEDDGLHPPGAALAVTTFSIAGATLHACAVKEPDDATEANGDGSDVLARVASGFTRLLNQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079028

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences