NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F079020

Metagenome Family F079020

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079020
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 115 residues
Representative Sequence VSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATA
Number of Associated Samples 107
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 27.45 %
% of genes near scaffold ends (potentially truncated) 87.93 %
% of genes from short scaffolds (< 2000 bps) 82.76 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (87.931 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(37.069 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.759 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.216.218.220
1KansclcFeb2_01257310
2KansclcFeb2_00296210
3ICCgaii200_08500611
4AP72_2010_repI_A100DRAFT_10120761
5JGI10214J12806_109245033
6JGI10216J12902_1097727941
7JGI25381J37097_10095641
8C688J35102_1199343742
9C688J35102_1202602572
10JGI25387J43893_10076793
11Ga0062590_1002144891
12Ga0062591_1001433341
13Ga0066683_108516862
14Ga0066684_102035083
15Ga0066685_107678952
16Ga0070673_1002316111
17Ga0070709_110373132
18Ga0070714_1002652111
19Ga0070713_1019412971
20Ga0070708_1008043761
21Ga0066682_107584161
22Ga0068867_1004600083
23Ga0070706_1017923162
24Ga0070698_1013859181
25Ga0070686_1013599252
26Ga0066701_105173092
27Ga0066701_107674002
28Ga0066695_104080141
29Ga0066670_102670972
30Ga0068855_1006678961
31Ga0066706_108025641
32Ga0068856_1011531531
33Ga0068852_1016242041
34Ga0066696_102018961
35Ga0066656_110326601
36Ga0066652_1006188891
37Ga0066652_1013475311
38Ga0070712_1007806251
39Ga0066653_105250742
40Ga0066658_105608422
41Ga0066659_104266691
42Ga0079219_123266001
43Ga0066709_1022086982
44Ga0066709_1046367081
45Ga0075423_104127751
46Ga0105242_101999693
47Ga0105248_126617402
48Ga0134082_102526492
49Ga0134067_102790692
50Ga0134084_100575111
51Ga0134064_101294563
52Ga0134065_103129572
53Ga0134080_104176391
54Ga0126372_106056791
55Ga0134125_103719433
56Ga0134128_104223853
57Ga0134126_104320541
58Ga0134126_122609372
59Ga0134124_110760722
60Ga0134123_100813531
61Ga0137365_102152041
62Ga0137365_105444573
63Ga0137381_106585262
64Ga0137378_110857381
65Ga0137370_104236371
66Ga0137390_116860472
67Ga0164300_110172171
68Ga0134110_105658512
69Ga0134081_102133371
70Ga0157376_124575441
71Ga0134073_103342772
72Ga0132256_1011747411
73Ga0184605_100142074
74Ga0184605_102020461
75Ga0184625_102870982
76Ga0190269_106282952
77Ga0066669_103328621
78Ga0066669_106901171
79Ga0190267_110251582
80Ga0210382_100929173
81Ga0193694_10064863
82Ga0207642_111449431
83Ga0207685_101237682
84Ga0207645_102325253
85Ga0207693_108564671
86Ga0207660_110551062
87Ga0207665_104190201
88Ga0207712_102424533
89Ga0207640_114379982
90Ga0207639_107665511
91Ga0207678_105386623
92Ga0207648_112270282
93Ga0207675_1000708335
94Ga0209350_10156163
95Ga0209238_11369552
96Ga0209265_11561841
97Ga0209687_10803881
98Ga0209472_11321882
99Ga0209470_10369081
100Ga0209057_10582922
101Ga0209807_13490631
102Ga0209056_101052921
103Ga0209577_105712671
104Ga0307313_102258452
105Ga0307298_102594032
106Ga0307307_100128053
107Ga0307292_100635552
108Ga0307286_103032541
109Ga0307278_102599191
110Ga0307304_104499361
111Ga0310813_110034732
112Ga0307473_107441771
113Ga0310890_102651481
114Ga0307472_1005957623
115Ga0310812_102413972
116Ga0310811_106345793
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.91%    β-sheet: 2.63%    Coil/Unstructured: 32.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110VSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATACytopl.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
87.9%12.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Forest Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
12.1%5.2%5.2%7.8%25.0%6.9%7.8%4.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_012573102124908045SoilMPPAAGYDPKIIERFAEQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERRVSAAVTEAVAS
KansclcFeb2_002962102124908045SoilVSSAAGFDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVAAIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHA
ICCgaii200_085006112228664021SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEP
AP72_2010_repI_A100DRAFT_101207613300000837Forest SoilMFREMPAAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALLGILIGYVIGEGRAFRYRVQAQSAIFQLEIERRVSAAVTEAVASVAAPPASPPPVAEP
JGI10214J12806_1092450333300000891SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATA
JGI10216J12902_10977279413300000956SoilMSREMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGIATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERRVSAAVTEAVASVAAPTPSAAPAV
JGI25381J37097_100956413300002557Grasslands SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGVLVGWVVGEGRAFRYXVQAQSAIFQLEIERRVTSAVA
C688J35102_11993437423300002568SoilVSAAASYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALIGILLGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVVTATAQAAPVAEEPVVTPSLPPLS
C688J35102_12026025723300002568SoilMADQKAMPPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPPGFGLATIIIGALLGILVGYVIGEGRAFRFRVQAQSAIFQLEIERRVSAAVAEAVASAAGAQPLQPLQP
JGI25387J43893_100767933300002915Grasslands SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGVLVGWVVGEGRAFRYRVQAQSAIFQLE
Ga0062590_10021448913300004157SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVT
Ga0062591_10014333413300004643SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQ
Ga0066683_1085168623300005172SoilMMVLKLGPSAADHSEVAPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPAGFGVATIIVGALLGILVGYVIGEGRAFRYRV
Ga0066684_1020350833300005179SoilVSPAGSYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALLGVLIGYVIGEGRAFRFRVQAQSAIFQLEIERRVSSAVAEAVATAVAQTPPAAEAPVI
Ga0066685_1076789523300005180SoilMPRGMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIER
Ga0070673_10023161113300005364Switchgrass RhizosphereVADHHEVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEA
Ga0070709_1103731323300005434Corn, Switchgrass And Miscanthus RhizosphereMSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEP
Ga0070714_10026521113300005435Agricultural SoilVADHHEVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRV
Ga0070713_10194129713300005436Corn, Switchgrass And Miscanthus RhizosphereVADHHEVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIILGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAPSPVLEEPP
Ga0070708_10080437613300005445Corn, Switchgrass And Miscanthus RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAAS
Ga0066682_1075841613300005450SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAQAT
Ga0068867_10046000833300005459Miscanthus RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRV
Ga0070706_10179231623300005467Corn, Switchgrass And Miscanthus RhizosphereVGPGAAYDPRVIERFAEQLLAKADSVRVGSAAVGGILGVVFGAVPMTPLESVWPVPARFGVATMLIGALAGVLVGWVVGEGRAFRYRVQAQMALFQLEIERKV
Ga0070698_10138591813300005471Corn, Switchgrass And Miscanthus RhizosphereVGSAAAYDPRVIERFAEQLLAKADSVRVGCAVGGGILGVLFGAVPLTGLKWVWTIPGSFGIATMLIGALVGVLVGWVIGEGRAFRYRVQAQM
Ga0070686_10135992523300005544Switchgrass RhizosphereVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVADAVATATAHAASTVLEEPPTLPSVPPLSPA
Ga0066701_1051730923300005552SoilMSSGTGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPAGFGVATIIVGALLGILLGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVASAAVQHVQPAAAAPSSPVP
Ga0066701_1076740023300005552SoilVGSAAAYDPRVIERFAEQLLAKADSVRVGCAVAGGILGVLFGAVPMTGLKWVWTIPGSFGIATMLIGALVGVLVGWVIGEGRAFRYRVQAQMAFFQLEIERKVEASLEA
Ga0066695_1040801413300005553SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIE
Ga0066670_1026709723300005560SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAV
Ga0068855_10066789613300005563Corn RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEELQKPASLPPLSPAPPVAEAPA
Ga0066706_1080256413300005598SoilMSGAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALIGILLGYVIGEGRAFRYRVQAQSAIF
Ga0068856_10115315313300005614Corn RhizosphereVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVADAVATATAHAASTVLEEPPTLPSVPPLSPAP
Ga0068852_10162420413300005616Corn RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEELQKPA
Ga0066696_1020189613300006032SoilMSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGIPAGFGVATIIVGALIGILVGWVVGEGRAFRYRVQAQSAIFQLEIERR
Ga0066656_1103266013300006034SoilMSGAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPAGFGIATIIVGALLGILVGYVIGEGRAFRYRVQAQSAIFQLEIERR
Ga0066652_10061888913300006046SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQA
Ga0066652_10134753113300006046SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGVLVGWVVGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVAAGAAQTSPVVEEP
Ga0070712_10078062513300006175Corn, Switchgrass And Miscanthus RhizosphereVSPAAGYDPKIIERFADQLLRKADTVRIGCAVGGGIFGVFVGAVPLTPLRSIWGLPASFGVATIIVGALVGILIGWVVGEGRAFRFRVQAQSAIFQLEIERRVTSAVAEAVATAAAQAATVVEEPVKPPSLPPLSPVIESAPPIDE
Ga0066653_1052507423300006791SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGILLGYVIGEGRAFRYRVQAQSAIFQLEIERRVSAAVAEA
Ga0066658_1056084223300006794SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGVLVGWVVGEGRAFRYRVQA
Ga0066659_1042666913300006797SoilVSPAGSYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALLGVLIGYVIGEGRAFRFRVQAQSAIFQL
Ga0079219_1232660013300006954Agricultural SoilMSGSGYDPKIIERFADQLLRKADTVRVGFAVGGGIFGTFVGAVPMTPLKSVWGVPAGFGVATIIVGALLGVMIGYVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVSQAA
Ga0066709_10220869823300009137Grasslands SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERRVSAAVTEAVASVAVAPTASEPAA
Ga0066709_10463670813300009137Grasslands SoilMSGAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPAGFGIATIIVGALLGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSAAVSEAVANAAAQQAQT
Ga0075423_1041277513300009162Populus RhizosphereVAPATGYDPKIIERFADQLLRKADTVRIGCAVGGGIFGVFVGAVPLTPLRSIWGLPASFGVATIIVGALVGILIGWVVGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATAAAQAAPVVDEPVKPPS
Ga0105242_1019996933300009176Miscanthus RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRALRYRVQAQSAIFQLEIERRVTSAVADAVATATAHAASTVLE
Ga0105248_1266174023300009177Switchgrass RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAA
Ga0134082_1025264923300010303Grasslands SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPVGFGVATIMVGALVGVLVGWVVGEGRAFRYRVQAQSAIFQLEI
Ga0134067_1027906923300010321Grasslands SoilMSGQGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVLLGSVPLTPLKTVWGVPAGFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERRVSAAVTE
Ga0134084_1005751113300010322Grasslands SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERRVSAAVTEAVASVAVAPTASEPAAPVVEPARTP
Ga0134064_1012945633300010325Grasslands SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQ
Ga0134065_1031295723300010326Grasslands SoilVEPGASYDPRVIERFAEQLLRKADSVRVGSAAVGGILGVIFGAVPLTPLESVWPIPSRFGVATMLIGALSGVLVGWVVGEGRAFRFRVQAQMALFQLEIERKVEAAVVGAVTQAPAPA
Ga0134080_1041763913300010333Grasslands SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVIGEGRAFRYRVQAQSAIFQLEI
Ga0126372_1060567913300010360Tropical Forest SoilMSAAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLHSVWGVPAGFGVATIIVGALLGILIGYVIGEGRAFRYRVQAQSAIFQLEIERRVSDAVTEAVASVTMPPASTPAV
Ga0134125_1037194333300010371Terrestrial SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVADAVA
Ga0134128_1042238533300010373Terrestrial SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPQKPPSLPPLS
Ga0134126_1043205413300010396Terrestrial SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEELQKPASLPPLSPAPPVAEAPAE
Ga0134126_1226093723300010396Terrestrial SoilMSGTGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPPGFGIATVIVGALLGILVGYVIGEGRAFRFRVQAQSAIFQLEIERRVSSAVAEAVASATAAQPIQVVQPAPVAVPEPEEVEPSVSPASPAP
Ga0134124_1107607223300010397Terrestrial SoilVADHHEVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTS
Ga0134123_1008135313300010403Terrestrial SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSA
Ga0137365_1021520413300012201Vadose Zone SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWSLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERR
Ga0137365_1054445733300012201Vadose Zone SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQS
Ga0137381_1065852623300012207Vadose Zone SoilVEPGASYDPRVIERFAEQLLRKADSVRVGSAAVGGILGVIFGAVPLTPLESVWPIPSRFGVATMLIGALSGVLVGWVVGEGRAFRFRVQAQMALFQLEIERKVE
Ga0137378_1108573813300012210Vadose Zone SoilVVPGASYDPRVIERFAEQLLRKADSVRVGSAVVGGILGVIFGAVPLTPLESVWPIPSRFGVATMLIGALSGVLVGWVVGEGRAFRFRVQAQMALFQLEIERKVEAAVVGAVTQAPAAAPP
Ga0137370_1042363713300012285Vadose Zone SoilMAAAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGILLGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVATAAAQAAP
Ga0137390_1168604723300012363Vadose Zone SoilVGPAAAYDPRVIERFAEQLLAKADSVRVGCAVGGGILGVLFGAVPLTGLKWVWTIPGNFGIATMLIGGFIGVLVGWVIGEGRAFRYRVQAQMAFFQLEIER
Ga0164300_1101721713300012951SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGIATIIVGALVGILIGWVIGEGRAFRYRVQAQSAI
Ga0134110_1056585123300012975Grasslands SoilVIERFAEQLLAKADSVRVGCAVAGGILGVLFGAVPMTGLKWVWTIPGSFGIATMLIGALVGVLVGWVIGEGRAFRYRVQAQ
Ga0134081_1021333713300014150Grasslands SoilVSPAGSYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALLGVLIGYVIGEGRAFRFRVQAQSAIFQLEI
Ga0157376_1245754413300014969Miscanthus RhizosphereVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVLEEPPTL
Ga0134073_1033427723300015356Grasslands SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERR
Ga0132256_10117474113300015372Arabidopsis RhizosphereMSAAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLHSVWGVPAGFGVATIIVGALLGILIGYVIGEGRAFRYRVQAQSAIFQLEIERRVSTAVAEAVASVAAPTAPTAPTAPV
Ga0184605_1001420743300018027Groundwater SedimentMMVLKVGRPVADHTEGAPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVATA
Ga0184605_1020204613300018027Groundwater SedimentVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVV
Ga0184625_1028709823300018081Groundwater SedimentVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAV
Ga0190269_1062829523300018465SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATA
Ga0066669_1033286213300018482Grasslands SoilMAAAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGILLGYVIGEGRAFRYRVQAQSAIFQLEIERRVS
Ga0066669_1069011713300018482Grasslands SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAE
Ga0190267_1102515823300019767SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEE
Ga0210382_1009291733300021080Groundwater SedimentVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVAAIIVGALVGILIGWVIGEGRAFRYRV
Ga0193694_100648633300021415SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIE
Ga0207642_1114494313300025899Miscanthus RhizosphereVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIER
Ga0207685_1012376823300025905Corn, Switchgrass And Miscanthus RhizosphereVSPAAGYDPKIIERFADQLLRKADTVRIGCAVGGGIFGVFVGAVPLTPLRSIWGLPASFGVATIIVGALVGILIGWVVGEGRAFRFRVQAQSAIFQLEIERRVTSAVAEAVATAAAQAATVVEEPVKPPSLPPLSPVIESAPPIDEGVATVTGQERDRCPARPARHDTDPRASRPLHLPATRA
Ga0207645_1023252533300025907Miscanthus RhizosphereMSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPQKPPS
Ga0207693_1085646713300025915Corn, Switchgrass And Miscanthus RhizosphereVADHHEVSPAAGYDPKIIERFADQLLRKADTVRIGCAVGGGIFGVFVGAVPLTPLRSIWGLPASFGVATIIVGALVGILIGWVVGEGRAFRFRVQAQSAIFQLEIERRVTSAVAEAVATAAAQAATVVEEPVKPPSLPPLSPVIESAPPIDEGVA
Ga0207660_1105510623300025917Corn RhizosphereVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQS
Ga0207665_1041902013300025939Corn, Switchgrass And Miscanthus RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPQKPPSLP
Ga0207712_1024245333300025961Switchgrass RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPQKPPSLPPLSP
Ga0207640_1143799823300025981Corn RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSA
Ga0207639_1076655113300026041Corn RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAH
Ga0207678_1053866233300026067Corn RhizosphereVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVADAVATATAHAASTVLEEPP
Ga0207648_1122702823300026089Miscanthus RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATAT
Ga0207675_10007083353300026118Switchgrass RhizosphereVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQS
Ga0209350_101561633300026277Grasslands SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEA
Ga0209238_113695523300026301Grasslands SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGLPAGFGVATIIVGALVGVLVGWVVGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVAAGAAQASPVVEEL
Ga0209265_115618413300026308SoilMPPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPASFGVATIIVGALLGILIGYVVGEGRAFRYRVQAQSAIFQLEIERRVSA
Ga0209687_108038813300026322SoilMSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGIPAGFGVATIIVGALIGILVGWVVGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVTTVTAQAAP
Ga0209472_113218823300026323SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEA
Ga0209470_103690813300026324SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVAAGAAQT
Ga0209057_105829223300026342SoilMSSGTGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGVPAGFGVATIIVGALLGILLGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVASAAVQHVQPAAAAP
Ga0209807_134906313300026530SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIERR
Ga0209056_1010529213300026538SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATA
Ga0209577_1057126713300026552SoilVSPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLQSVWGLPAGFGVATIIVGALVGVLVGWVVGEGRAFRYRVQAQSAIFQL
Ga0307313_1022584523300028715SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPQKPPSLP
Ga0307298_1025940323300028717SoilMSGTGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKAVWGVPPGFGIATVIVGALLGILVGYVIGEGRAFRFRVQAQSAIFQLEIERR
Ga0307307_1001280533300028718SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPQKAPSLPP
Ga0307292_1006355523300028811SoilMSGTGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKAVWGVPPGFGIATVIVGALLGILVGYVIGEGRAFRFRVQAQSAIFQLEIERRVSSAVAEAVASAAAAQPIVQPP
Ga0307286_1030325413300028876SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALIGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPV
Ga0307278_1025991913300028878SoilMMVLKVGHSVADHLEVAPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALVGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVATAAAQ
Ga0307304_1044993613300028885SoilMMVLKVGHSVADHLEVAPAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLRSVWGVPAGFGVATIIVGALIGILVGYVIGEGRAFRYRVQAQSAIFQLEIERRVSSAVAEAVATAAAQAAQVTE
Ga0310813_1100347323300031716SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATA
Ga0307473_1074417713300031820Hardwood Forest SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSA
Ga0310890_1026514813300032075SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVADAVATATAHAASTVLEEPPTL
Ga0307472_10059576233300032205Hardwood Forest SoilVSPAAGYDPKIIERFAEQLLRKADNVRVGCAVGGGVFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVADAVATATAHAASTVLEE
Ga0310812_1024139723300032421SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSAIFQLEIERRVTSAVAEAVATATAHAASPVIEEPRK
Ga0310811_1063457933300033475SoilVSSAAGYDPKIIERFADQLLRKADTVRVGCAVGGGIFGVFVGAVPLTPLKSVWGLPAGFGVATIIVGALVGILIGWVIGEGRAFRYRVQAQSA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.