Metagenome / Metatranscriptome Family F078970

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078970
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	71 residues
Representative Sequence	EVSLWSDLANKLGATKSVPEALETYTKCVSQRMQMAADDGRRMVDEAQRITQKITQSLGNGWPTAST
Number of Associated Samples	93
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.87 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.586 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (15.517 % of family members)
Environment Ontology (ENVO)	Unclassified (26.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.89% β-sheet: 0.00% Coil/Unstructured: 42.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01569	PAP2	15.52
PF01144	CoA_trans	12.93
PF13561	adh_short_C2	12.93
PF09361	Phasin_2	11.21
PF00072	Response_reg	4.31
PF01740	STAS	2.59
PF03976	PPK2	1.72
PF00106	adh_short	1.72
PF11339	DUF3141	1.72
PF00484	Pro_CA	1.72
PF13545	HTH_Crp_2	0.86
PF00196	GerE	0.86
PF04392	ABC_sub_bind	0.86
PF04972	BON	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	12.93
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	12.93
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	12.93
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.72
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.72
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.59 %
Unclassified	root	N/A	47.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.59 %
Unclassified	root	N/A	47.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.59 %
Unclassified	root	N/A	47.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.21 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.86 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.34 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.86 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.86 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.45 %
Bradyrhizobium shewense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	2.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.86 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.86 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.45 %
Bradyrhizobium shewense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	2.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Rhizobium aegyptiacum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium aegyptiacum	0.86 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.86 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1025776	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300003996\|Ga0055467_10083860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	883	Open in IMG/M
3300004091\|Ga0062387_101313183	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005163\|Ga0066823_10062788	Not Available	696	Open in IMG/M
3300005332\|Ga0066388_100485358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1874	Open in IMG/M
3300005332\|Ga0066388_100661728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1657	Open in IMG/M
3300005332\|Ga0066388_105506672	Not Available	641	Open in IMG/M
3300005341\|Ga0070691_10476855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	717	Open in IMG/M
3300005344\|Ga0070661_100291019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269	Open in IMG/M
3300005440\|Ga0070705_100896304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300005459\|Ga0068867_100197385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1609	Open in IMG/M
3300005544\|Ga0070686_100398547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1046	Open in IMG/M
3300005616\|Ga0068852_100319385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1508	Open in IMG/M
3300005618\|Ga0068864_100022400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5298	Open in IMG/M
3300005713\|Ga0066905_100288876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1281	Open in IMG/M
3300005713\|Ga0066905_101464349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300005764\|Ga0066903_100998978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1529	Open in IMG/M
3300005764\|Ga0066903_102727965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300005764\|Ga0066903_102961884	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300005764\|Ga0066903_103123343	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005764\|Ga0066903_103149617	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005764\|Ga0066903_104079948	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300005764\|Ga0066903_104765295	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300005764\|Ga0066903_106104669	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300005764\|Ga0066903_107210157	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_107299561	Not Available	571	Open in IMG/M
3300005764\|Ga0066903_108805717	Not Available	512	Open in IMG/M
3300006176\|Ga0070765_100461539	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300006354\|Ga0075021_10741800	Not Available	632	Open in IMG/M
3300006852\|Ga0075433_10132829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2212	Open in IMG/M
3300006854\|Ga0075425_100310223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1816	Open in IMG/M
3300006881\|Ga0068865_100052376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2829	Open in IMG/M
3300006903\|Ga0075426_11102835	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006904\|Ga0075424_100276450	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300006914\|Ga0075436_101270165	Not Available	557	Open in IMG/M
3300009011\|Ga0105251_10154867	Not Available	1034	Open in IMG/M
3300009092\|Ga0105250_10173136	Not Available	904	Open in IMG/M
3300009101\|Ga0105247_11876489	Not Available	501	Open in IMG/M
3300009162\|Ga0075423_11208030	Not Available	807	Open in IMG/M
3300009174\|Ga0105241_11749690	Not Available	605	Open in IMG/M
3300009176\|Ga0105242_10477542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1181	Open in IMG/M
3300010360\|Ga0126372_11842493	Not Available	649	Open in IMG/M
3300010362\|Ga0126377_10397673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium aegyptiacum	1388	Open in IMG/M
3300010362\|Ga0126377_11050072	Not Available	882	Open in IMG/M
3300010362\|Ga0126377_13021378	Not Available	543	Open in IMG/M
3300010366\|Ga0126379_11069014	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300010371\|Ga0134125_10837815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	1011	Open in IMG/M
3300010400\|Ga0134122_12742692	Not Available	545	Open in IMG/M
3300011119\|Ga0105246_10867787	Not Available	806	Open in IMG/M
3300012514\|Ga0157330_1048312	Not Available	595	Open in IMG/M
3300012515\|Ga0157338_1003440	Not Available	1312	Open in IMG/M
3300012957\|Ga0164303_11515147	Not Available	507	Open in IMG/M
3300012984\|Ga0164309_10110382	All Organisms → cellular organisms → Bacteria → Proteobacteria	1756	Open in IMG/M
3300012984\|Ga0164309_10940152	Not Available	708	Open in IMG/M
3300012987\|Ga0164307_10197331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1367	Open in IMG/M
3300014324\|Ga0075352_1299807	Not Available	512	Open in IMG/M
3300014326\|Ga0157380_10569121	Not Available	1115	Open in IMG/M
3300015371\|Ga0132258_13531989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300015372\|Ga0132256_101025366	Not Available	940	Open in IMG/M
3300015373\|Ga0132257_103461454	Not Available	574	Open in IMG/M
3300015374\|Ga0132255_101134255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1176	Open in IMG/M
3300015374\|Ga0132255_102321207	Not Available	819	Open in IMG/M
3300016294\|Ga0182041_10323659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1286	Open in IMG/M
3300016319\|Ga0182033_11820223	Not Available	553	Open in IMG/M
3300016422\|Ga0182039_11382240	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300017944\|Ga0187786_10016864	All Organisms → cellular organisms → Bacteria → Proteobacteria	1881	Open in IMG/M
3300017944\|Ga0187786_10226784	Not Available	726	Open in IMG/M
3300017947\|Ga0187785_10274118	Not Available	765	Open in IMG/M
3300017974\|Ga0187777_10329747	Not Available	1047	Open in IMG/M
3300017994\|Ga0187822_10268160	Not Available	592	Open in IMG/M
3300018029\|Ga0187787_10053749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1195	Open in IMG/M
3300018032\|Ga0187788_10162265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	848	Open in IMG/M
3300018058\|Ga0187766_11020972	Not Available	590	Open in IMG/M
3300018064\|Ga0187773_10132036	Not Available	1269	Open in IMG/M
3300018081\|Ga0184625_10172603	Not Available	1131	Open in IMG/M
3300021560\|Ga0126371_12132593	Not Available	676	Open in IMG/M
3300025559\|Ga0210087_1080874	Not Available	643	Open in IMG/M
3300025900\|Ga0207710_10259320	Not Available	871	Open in IMG/M
3300025900\|Ga0207710_10737423	Not Available	517	Open in IMG/M
3300025920\|Ga0207649_10263912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1245	Open in IMG/M
3300025934\|Ga0207686_10369509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1085	Open in IMG/M
3300025938\|Ga0207704_10148388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1651	Open in IMG/M
3300025940\|Ga0207691_11733382	Not Available	505	Open in IMG/M
3300025986\|Ga0207658_11665885	Not Available	583	Open in IMG/M
3300026023\|Ga0207677_10212137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1547	Open in IMG/M
3300026035\|Ga0207703_11505851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	647	Open in IMG/M
3300026121\|Ga0207683_10955128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	796	Open in IMG/M
3300026711\|Ga0207489_101926	Not Available	517	Open in IMG/M
3300026740\|Ga0207439_102038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300026771\|Ga0207552_101268	Not Available	856	Open in IMG/M
3300026814\|Ga0207586_101468	Not Available	731	Open in IMG/M
3300026834\|Ga0207583_1005036	Not Available	531	Open in IMG/M
3300027011\|Ga0207740_1042011	Not Available	533	Open in IMG/M
3300027390\|Ga0207435_104683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300027560\|Ga0207981_1004396	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300027874\|Ga0209465_10058948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1847	Open in IMG/M
3300028379\|Ga0268266_10862623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	875	Open in IMG/M
3300028379\|Ga0268266_12070121	Not Available	542	Open in IMG/M
3300028906\|Ga0308309_10820297	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300029701\|Ga0222748_1012540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1127	Open in IMG/M
3300029701\|Ga0222748_1023937	All Organisms → cellular organisms → Bacteria → Proteobacteria	912	Open in IMG/M
3300031538\|Ga0310888_11076432	Not Available	508	Open in IMG/M
3300031771\|Ga0318546_10874618	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300031910\|Ga0306923_11229853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300031938\|Ga0308175_103103935	Not Available	516	Open in IMG/M
3300032160\|Ga0311301_11594752	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300032770\|Ga0335085_11412015	Not Available	729	Open in IMG/M
3300032828\|Ga0335080_11597168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	642	Open in IMG/M
3300032897\|Ga0335071_11788402	Not Available	558	Open in IMG/M
3300033289\|Ga0310914_10491106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1111	Open in IMG/M
3300033289\|Ga0310914_11601451	Not Available	555	Open in IMG/M
3300033433\|Ga0326726_11530017	Not Available	649	Open in IMG/M
3300033551\|Ga0247830_11590262	Not Available	523	Open in IMG/M
3300033758\|Ga0314868_024645	Not Available	663	Open in IMG/M
3300034090\|Ga0326723_0017912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2869	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.97%
Host-Associated	Host-Associated	31.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.79%
Plants	Host-Associated → Plants	31.03%
Aquatic	Environmental → Aquatic	5.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.21%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Marine	Environmental → Aquatic → Marine	1.72%
Sediment	Environmental → Aquatic → Sediment	1.72%
Peat	Environmental → Terrestrial → Peat	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.03%
Loam	Environmental → Terrestrial → Soil → Loam	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026711	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A2-10 (SPAdes)	Environmental	Open in IMG/M
3300026740	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-12 (SPAdes)	Environmental	Open in IMG/M
3300026771	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4-12 (SPAdes)	Environmental	Open in IMG/M
3300026814	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-10 (SPAdes)	Environmental	Open in IMG/M
3300026834	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-10 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027390	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-11 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033758	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_A	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10257761	3300000816	Forest Soil	RVQSEMSLWSDLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKQLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0055467_100838602	3300003996	Natural And Restored Wetlands	RAWLARVQSEVALWSDLAGKLTATRSVPEALEAYSKCVSQRMQMAADDGRRLVDESQRITQKLANSLGNAWPTAST*
Ga0062387_1013131831	3300004091	Bog Forest Soil	VQSEIAIWSDLATKLAATRTAPEALKAYSKCVSQRMQVAVEDGRRLFEEGQQVTQKINRSLTTGWPTRGT*
Ga0066823_100627881	3300005163	Soil	SLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0066388_1004853583	3300005332	Tropical Forest Soil	EVSLWSDLANKLSTTQSVPEAVEACSKCVSQRMQMAADDARQFVDESQQMMQKITHSMGNKLPTATT*
Ga0066388_1006617281	3300005332	Tropical Forest Soil	DQASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVNESQQAVQKLTKSLGNGWPSAST*
Ga0066388_1055066721	3300005332	Tropical Forest Soil	KDLLAAYEEASRVWVARVQSEVSLWSDLASKLTKTRSVPEAIQTYAQCVSQRMKMAIDDGRLLADEAQRIGEKFSKSLGDGGRQLTDR*
Ga0070691_104768551	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	ESCDHASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0070661_1002910191	3300005344	Corn Rhizosphere	RMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0070705_1008963041	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	WLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0068867_1001973851	3300005459	Miscanthus Rhizosphere	SCDHASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0070686_1003985473	3300005544	Switchgrass Rhizosphere	SYELTSRAWLDRMQSEVSLWSDLANKLSGTKTIPEAVEIYTKFGSQRIQMAANDGRRFVDEAQQITRKIARSMSNGLPIAST*
Ga0068852_1003193853	3300005616	Corn Rhizosphere	DRVQSEISLWSDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT*
Ga0068864_1000224003	3300005618	Switchgrass Rhizosphere	MQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0066905_1002888761	3300005713	Tropical Forest Soil	VSLWSDLANKLSTTKSIPEVFDACTKSVSQRMQMAADDGRRLVDDYQQLTQKIARSVGNGWPTGST*
Ga0066905_1014643492	3300005713	Tropical Forest Soil	SEMSLWSDFASKLSATKSIPEAFETYTKCVSQRMQMAADDGRKLVEEAQQMTQKLTQSLGNGRPGMTS*
Ga0066903_1009989783	3300005764	Tropical Forest Soil	QASRAWLARVQSEMSLWSDLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKQLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0066903_1027279653	3300005764	Tropical Forest Soil	SEMSLWSDLANKMNGTKSIPEAFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0066903_1029618842	3300005764	Tropical Forest Soil	DLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0066903_1031233431	3300005764	Tropical Forest Soil	VQSEVGLWSDLATKLTATKTVPEALEAYAKCVSEWMKMAADDGRLLTDEAQQITQKITKALGNGGLNRRPAD*
Ga0066903_1031496173	3300005764	Tropical Forest Soil	RNWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAANDARQFVDDSQQAVQKFAKSLGNGWPTAST*
Ga0066903_1040799482	3300005764	Tropical Forest Soil	ANKMNGTKSIPEAFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0066903_1047652951	3300005764	Tropical Forest Soil	NWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVNESQQAVQKLTKSLGNGWPSAST*
Ga0066903_1061046692	3300005764	Tropical Forest Soil	QSEMSLWSDLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKQLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0066903_1072101571	3300005764	Tropical Forest Soil	SELSLWSDLANKLSGSKSVPEAVETYTKCISQRMQMAADDGRRLVDEAQQITQKIAQSMGNGRPTAST*
Ga0066903_1072995611	3300005764	Tropical Forest Soil	GTKSIPEAFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPGAST*
Ga0066903_1088057172	3300005764	Tropical Forest Soil	VQSEMSLWSDLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKKLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0070765_1004615392	3300006176	Soil	TCEKMSHAWLARVQSEVAMWSELATTLTATRSVPEALETCSKCASKRMQMAAEDGRRLFEEGQQITQKINRTLTNGWPAKSS*
Ga0075021_107418003	3300006354	Watersheds	SEIALWSDLANKLGTTHTVPEALETYTKCVSQRMQMAADDGRRMFDESQQITQKIAKSLGAGWPAAST*
Ga0075433_101328291	3300006852	Populus Rhizosphere	IPEALDAYTKTVSQRMQMAADDGRRLVDEYQQLTQKIARSVGNGWPTAST*
Ga0075425_1003102231	3300006854	Populus Rhizosphere	SGTKSIPEALDAYTKTVSQRMQMAADDGRRLVDEYQQLTQKIARSVGNGWPTAST*
Ga0068865_1000523761	3300006881	Miscanthus Rhizosphere	ESCDQASRTWLARMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0075426_111028351	3300006903	Populus Rhizosphere	LQKELLEAYEQASRAWLARVQSEVALWSELATKLTATRSVPEALEAYTKCVSQRMQMTAEHGQRVFKDCQQITQKITKSLTNGWPSGST*
Ga0075424_1002764503	3300006904	Populus Rhizosphere	LSSTKSIPEAFETYTKCVSQRMQMAADDGRKLVEEAQQITQKFARSLGNGRPGMTS*
Ga0075436_1012701651	3300006914	Populus Rhizosphere	LSGTKSIPEALDAYTKTVSQRMQMAADDGRRLVDEYQQLTQKIARSVGNGWPTAST*
Ga0105251_101548671	3300009011	Switchgrass Rhizosphere	TSMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0105250_101731362	3300009092	Switchgrass Rhizosphere	EVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0105247_118764891	3300009101	Switchgrass Rhizosphere	NWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAST*
Ga0075423_112080301	3300009162	Populus Rhizosphere	CDHASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0105241_117496902	3300009174	Corn Rhizosphere	LGTTKSIPEAFETYAKCMSQRVQMAADDGRRLAEEAQQMTQKLTQSLGNGRPGMTS*
Ga0105242_104775424	3300009176	Miscanthus Rhizosphere	WSDLANKLSGTKTIPEAVEIYTKFGSQRMQMAANDGRRFVDEAQQITRKIARSMSNGLPIAST*
Ga0126372_118424932	3300010360	Tropical Forest Soil	DLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDRKKLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0126377_103976732	3300010362	Tropical Forest Soil	LSGVRSVPEALETCTKCASQRMQMAAEDGRRFVDESQQITQKIAKSLGNGWPAGGT*
Ga0126377_110500722	3300010362	Tropical Forest Soil	VQSEVGLWSDLATKLTATKTIPEALEAYAKCVSERMKMAADDGRLLADEAQQITQKITKALGNGWLNRRSVD*
Ga0126377_130213781	3300010362	Tropical Forest Soil	QSEMSLWSDFASKLSATKSIPEAFETYTKCVSQRMQMAADDGRKLVEEAQQMTQKLTQSLGNGRPGMTS*
Ga0126379_110690141	3300010366	Tropical Forest Soil	NKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST*
Ga0134125_108378151	3300010371	Terrestrial Soil	LTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAST*
Ga0134122_127426921	3300010400	Terrestrial Soil	LANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT
Ga0105246_108677872	3300011119	Miscanthus Rhizosphere	EVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARKFVDESQQMMQKITHSLGNKLSTATT*
Ga0157330_10483121	3300012514	Soil	WSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARKFVDESQQMMQKITHSLGNKLSTATT*
Ga0157338_10034401	3300012515	Arabidopsis Rhizosphere	TKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT*
Ga0164303_115151471	3300012957	Soil	DLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARKFVDESQQMMQKITHSLGNKLPTATT*
Ga0164309_101103821	3300012984	Soil	SELSLWSDMANKLSGTKTIPEALEVCTKCASQRMQMAADDSRRVVDEAQQITQKITQSMGNGWPTAST*
Ga0164309_109401523	3300012984	Soil	RAWLDRMQSEVSLWSDLANKLSGTKTIPEAVEIYTKFGSQRMQMAANDGRRFVDEAQQITRKIARSMSNGLPIAST*
Ga0164307_101973314	3300012987	Soil	LESYELTSRAWLDRMQSEVSLWSDLANKLSGTKTIPEAVEIYTKFGSQRMQMAANDGRRFVDEAQQITRKIARSMSNGLPIAST*
Ga0075352_12998072	3300014324	Natural And Restored Wetlands	EVSLWSDLANKLGATKSVPEALETYTKCVSQRMQMAADDGRRMVDEAQRITQKITQSLGNGWPTAST*
Ga0157380_105691213	3300014326	Switchgrass Rhizosphere	DHASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT*
Ga0132258_135319891	3300015371	Arabidopsis Rhizosphere	VALQKELLEAYEQASRAWLARVQSEVALWSELATKLTATRSVPEDLEAYTKCVSQRMQMTAEHGQRVFKDCQQITQKITKSLTNGWPSGST*
Ga0132256_1010253662	3300015372	Arabidopsis Rhizosphere	EISLWSDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT*
Ga0132257_1034614542	3300015373	Arabidopsis Rhizosphere	ANKLSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAST*
Ga0132255_1011342551	3300015374	Arabidopsis Rhizosphere	MQSEVSLWSDLANKLSTTQSVPEAVETYSKCVSQRMQMAADDARKFVDESQQMMQKVTHSLSDGWPRATT*
Ga0132255_1023212071	3300015374	Arabidopsis Rhizosphere	RMQSEISLWSDLASKLSSTKSVPEAFETYTKCMSQRMQMAADDGRKLVEEAQQITQKFAQSLGNGRPGITT*
Ga0182041_103236591	3300016294	Soil	EMSLWSDLANKMSGTKSIPEAFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST
Ga0182033_118202233	3300016319	Soil	VNRAWLARVQSEVGLWSDLATKLTATKTVPEALEAYAKCVSEWMKMAADDGRLLTDEAQQITQKITKALGNGGLNRRPAD
Ga0182039_113822401	3300016422	Soil	ICEPSFAVLLQLLDAWDQESRPCLALVQSEMSLWSDLANKMSGTKSIPEAFDAYTEGVSQRMQMAAEDGKQLVEEYQQLTQKIAKSLGNGWPSAST
Ga0182039_121791731	3300016422	Soil	EIDLWSDLASKLSTTRSVPEALEAYQKCAAQRMQMAADDGRQLFDECQKITQRITQSLSTRWPTGSI
Ga0187786_100168643	3300017944	Tropical Peatland	LWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDTRQLVDESQQMMQKITHSLGNKVPIATT
Ga0187786_102267843	3300017944	Tropical Peatland	SHTVPQALETYTKCVSQRMQMAADDGRRLFDESQQITQKIAKSLGAGWPAAST
Ga0187785_102741181	3300017947	Tropical Peatland	QASRAWLTRVQSELALWSDLANKLGASHTVPEALETYTKCVSQRMQMAADDGRRLFDESQQITQKIAKSLGAGWPAAST
Ga0187777_103297473	3300017974	Tropical Peatland	ARVQSEVALWSDLAAKLSATRTVPEALEACAKCASQRMQMAADDGRRLVTESQQITQKIAQSLGNGWTSAGST
Ga0187822_102681602	3300017994	Freshwater Sediment	SYEQASRMWLERLQSEIALWSDMANKLSATKSLPEALEAYSKCVSQRMQMAADDGRKIFNEAQNVTQKVARSIGNGWPAGST
Ga0187787_100537491	3300018029	Tropical Peatland	NKLSATKSVPEALETYTKCVSQRMQMAADDGRRMVDEAQQITQKIAQSLGNGWPTAST
Ga0187788_101622653	3300018032	Tropical Peatland	KLSGTKSVPEALESYTKCVSQRMQMAADDGRRMVDEAQQITQKIAQSLGNGWPTAST
Ga0187766_110209722	3300018058	Tropical Peatland	AAIALQKAVLESYEQASRAWLTRVQSEIALWSDLANKLGATHTVPEALETYSKCVSQRMQMAADDGRRLFDESQQITQKIAKSLGAGWPAAST
Ga0187773_101320363	3300018064	Tropical Peatland	SRAWLDRMQSEVSLWSDLANKLSATRTVPEALETCTKCVSQRMQMAADDGRRLVEEAQQITQKIAKSLGNGGPTAST
Ga0184625_101726031	3300018081	Groundwater Sediment	LLESCDQASRAWLARVQSEVSLWSDLANKLSGTQSIPEALEAYSKSVSQRMQMAAEDGRKLVDECQQLTQKFTKSLGNGWPSAST
Ga0126371_121325932	3300021560	Tropical Forest Soil	SEISLWSDLAEKLSKTHSIPEALESYSKCVSERMQMAAEDGRRLVEESQQLSQKIAHSLGNGWQSGST
Ga0210087_10808741	3300025559	Natural And Restored Wetlands	AWLARVQSEVALWSDLAGKLTATRSVPEVLEAYSKCVSQRMQMAADDGRRLVDESQRITQKLANSLGNAWPTAST
Ga0207710_102593202	3300025900	Switchgrass Rhizosphere	ASRSWLARMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARKFVDESQQMMQKITHSLGNKLSTATT
Ga0207710_107374231	3300025900	Switchgrass Rhizosphere	NWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAST
Ga0207649_102639121	3300025920	Corn Rhizosphere	LDRFGNKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT
Ga0207686_103695091	3300025934	Miscanthus Rhizosphere	WSDLANKLSGTKTIPEAVEIYTKFGSQRMQMAANDGRRFVDEAQQITRKIARSMSNGLPIAST
Ga0207704_101483881	3300025938	Miscanthus Rhizosphere	AVQKAFLESCDHASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT
Ga0207691_117333822	3300025940	Miscanthus Rhizosphere	MAVQKAFLESCDHASRSWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVDESQQMMQKITHSLGNKLPTATT
Ga0207658_116658851	3300025986	Switchgrass Rhizosphere	SRNWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAST
Ga0207677_102121373	3300026023	Miscanthus Rhizosphere	EISLWSDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT
Ga0207703_115058511	3300026035	Switchgrass Rhizosphere	LSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAST
Ga0207683_109551283	3300026121	Miscanthus Rhizosphere	AWLDRMQSEVSLWSDLANKLSGTKTIPEAVEIYTKFGSQRMQMAANDGRRFVDEAQQITRKIARSMSNGLPIAST
Ga0207489_1019261	3300026711	Soil	SDLASKLSSTKSIPEAFETYTKCVSQRMQMAADDGRKLAEEAQQITQKFAQSLGNGRPGMTS
Ga0207439_1020381	3300026740	Soil	ASRVWIDRVQSEISLWSDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT
Ga0207552_1012681	3300026771	Soil	SRVWIDRVQSEISLWSDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT
Ga0207586_1014683	3300026814	Soil	QASRAWVDRVQSEISLWSDLASKLSSTKSIPEAFETYTKCVSQRMQMAADDGRKLAEEAQQITQKFAQSLGNGRPGMTS
Ga0207583_10050361	3300026834	Soil	SEISLWSDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRKLAEEAQQITQKFAQSLGNGRPGMTS
Ga0207740_10420112	3300027011	Tropical Forest Soil	LKRVQSEVALWSDLAAKLSATRTVPEALETCSKCASQRMQMAADDSRRLVNESQQITQKIAQSLGNGWTSTGST
Ga0207435_1046832	3300027390	Soil	SDLATKLSSTKSVPEALDAYTKCVSQRMQMAADDGRRLAEEAQQLTQKFAQSLGNGRPGMTT
Ga0207981_10043961	3300027560	Soil	SDLASKLSSTKSVPEALDAYTKCVSQRMQMAADDGRKLAEEAQQLTQKFAQSLGNGRPGMTS
Ga0209465_100589483	3300027874	Tropical Forest Soil	LESCDQASRNWLTRMQSEVSLWSDLANKLSTTQSVPEAVEAYSKCVSQRMQMAADDARQFVGDSQQAVQKLAKSLGNGWPTAST
Ga0268266_108626231	3300028379	Switchgrass Rhizosphere	DLANKLSTTQSVPEAVEAYSRCVSQRMQMAAEDARRFVDESQQAVQKLAKSLGNGLPTAS
Ga0268266_120701211	3300028379	Switchgrass Rhizosphere	QSEVAWWSDLATKLAAPRTVPEAFETYAKCVSERMKMAADDGRLLADEAQQITQKITKSLSYGWPASST
Ga0308309_108202971	3300028906	Soil	VLQKELLETCEKMSHAWLARVQSEVAMWSELATTLTATRSVPEALETCSKCASKRMQMAAEDGRRLFEEGQQITQKINRTLTNGWPAKSS
Ga0222748_10125403	3300029701	Soil	VQSEVAMWSELATTLTATRSVPEALETCSKCASKRMQMAAEDGRRLFEEGQQITQKINRTLTNGWPTKSS
Ga0222748_10239372	3300029701	Soil	MHGARVQSEVAMWSELATTLTATRSVPEALETYSKCASKRMQMAAEDGRRLFEEGQQITQKINRTLTNGWPAKSS
Ga0310888_110764321	3300031538	Soil	DRVQSEISLWSDLASKLSSTKSIPEAFETYTKCVSQRMQMAADDGRKLAEEAQQLTQKFAQSLGNGRPGMTS
Ga0318546_108746181	3300031771	Soil	TKSIPEAFDTYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST
Ga0306923_112298531	3300031910	Soil	WVSRVQAEVAMWSDFTTKLAATRSAPEALDACSKCVPRQMQMAAEDGRRLFAEGQKITQRINRSLTSEWPAGST
Ga0308175_1031039352	3300031938	Soil	DRVQSEIALWSDLANKLGTSHTVPEALETCTKCVSQRMKMAADDGRRLVDESQQITQKIAKSMGAGWPTANT
Ga0311301_115947522	3300032160	Peatlands Soil	YEKMSHAWLARVQSEVAMWSELATTLTATRSVPEALETYSKCASKRMQMAAEDGRRLFEEGQQITQKINRTLTNAWPTKSS
Ga0335085_114120153	3300032770	Soil	KALLESYEQASRAWLARVQSEVSLWSDLATKLTTTRTVPEALETYSKCVSERMKMAADDGRRLADEAQLITNKITKSLGNGGWPAAST
Ga0335080_115971682	3300032828	Soil	SDLATKLTATRTVPEALETYSKCVSERMKMAADDGRRLADEAQLITNKITKSLGTGGWPAAST
Ga0335071_117884022	3300032897	Soil	ATALQKAILESYEQASRDWLARVQSEVALWSDLAAKLSATRTVPEALETCAKCASQRMQMAADDGRRLVTESQQITQKIAQSLGNGWTSTGST
Ga0310914_104911062	3300033289	Soil	AWVSRVQAEVAMWSDFTTKLAATRSAPEALDACSKCVPRQMQMAAEDGRRLFAEGQKITQRINRSLTSEWPAGST
Ga0310914_116014511	3300033289	Soil	VQSEMSLWSDLANKMNGTKSIPEVFDAYTKGVSQRMQMAAEDGKRLVEEYQQLTQKIAKSLGNGWPSAST
Ga0326726_115300173	3300033433	Peat Soil	TIPEALEVCTKCASQRMQMAADDSRRVVDEAQQMTQKLAKSLGNGWPTAST
Ga0247830_115902622	3300033551	Soil	CDQASRAWLARVQSEVSLWSDLANKLSGTKSIPEAFDAYTKSVSQRMQMAADDGRKLVEEYQQLTQKIARSVGNGWPTAGT
Ga0314868_024645_418_663	3300033758	Peatland	YEQASRAWLTRVQSEIALWSDLANKLGATHTVPEALETYSKCVSQRMQMAADDGRRLFDESQQITQKIAKSLGAGWPAAST
Ga0326723_0017912_2639_2869	3300034090	Peat Soil	RAWLARVQSEVALWSDLASKLTATRTVPEALETYSKCVSQRMKMADDDGRLLADEAQKITQKITKSLGNGWPAAST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078970

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences