Metagenome Family F078966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078966
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	60 residues
Representative Sequence	MTDLRVPIGSFFTLVGAILCVTGLAANYRAPLESANVNLFCGVSMLIFGAVMLWLARRKS
Number of Associated Samples	85
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.10 %
% of genes near scaffold ends (potentially truncated)	23.28 %
% of genes from short scaffolds (< 2000 bps)	72.41 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.379 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.379 % of family members)
Environment Ontology (ENVO)	Unclassified (26.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.483 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.82% β-sheet: 0.00% Coil/Unstructured: 43.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00474	SSF	32.76
PF10509	GalKase_gal_bdg	21.55
PF00534	Glycos_transf_1	6.03
PF13439	Glyco_transf_4	5.17
PF02321	OEP	5.17
PF13483	Lactamase_B_3	2.59
PF13649	Methyltransf_25	2.59
PF00348	polyprenyl_synt	1.72
PF02899	Phage_int_SAM_1	0.86
PF01266	DAO	0.86
PF08240	ADH_N	0.86
PF07475	Hpr_kinase_C	0.86
PF00498	FHA	0.86
PF04909	Amidohydro_2	0.86
PF12679	ABC2_membrane_2	0.86
PF00982	Glyco_transf_20	0.86
PF00903	Glyoxalase	0.86
PF01734	Patatin	0.86
PF14907	NTP_transf_5	0.86
PF13519	VWA_2	0.86
PF16697	Yop-YscD_cpl	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	10.34
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	1.72
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.86
COG1493	Serine kinase of the HPr protein, regulates carbohydrate metabolism	Signal transduction mechanisms [T]	0.86
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.86
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.86
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.86
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.86
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.38 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.38 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.38 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.83 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	48.28 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	25.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	17.24 %
Unclassified	root	N/A	8.62 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25.00 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	15.52 %
Unclassified	root	N/A	8.62 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.86 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	15.52 %
Unclassified	root	N/A	8.62 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.59 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	13.79 %
Unclassified	root	N/A	8.62 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.59 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	13.79 %
Unclassified	root	N/A	8.62 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.59 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100452994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1419	Open in IMG/M
3300004092\|Ga0062389_104805386	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300004152\|Ga0062386_100026663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4263	Open in IMG/M
3300004635\|Ga0062388_102638505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	528	Open in IMG/M
3300005178\|Ga0066688_10814246	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005529\|Ga0070741_10677940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	912	Open in IMG/M
3300005541\|Ga0070733_10116344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1716	Open in IMG/M
3300005542\|Ga0070732_10368478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	865	Open in IMG/M
3300005542\|Ga0070732_10563440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	691	Open in IMG/M
3300005542\|Ga0070732_10767558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	588	Open in IMG/M
3300005542\|Ga0070732_10782553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	582	Open in IMG/M
3300005712\|Ga0070764_10251945	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005994\|Ga0066789_10443164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	542	Open in IMG/M
3300005995\|Ga0066790_10344978	Not Available	636	Open in IMG/M
3300006028\|Ga0070717_10056976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3230	Open in IMG/M
3300006176\|Ga0070765_100541070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1096	Open in IMG/M
3300006854\|Ga0075425_101715794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	706	Open in IMG/M
3300006854\|Ga0075425_102218789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	611	Open in IMG/M
3300006893\|Ga0073928_11024525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	561	Open in IMG/M
3300009038\|Ga0099829_10860446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	752	Open in IMG/M
3300009839\|Ga0116223_10567130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	657	Open in IMG/M
3300010343\|Ga0074044_11005582	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300010379\|Ga0136449_100145443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4670	Open in IMG/M
3300011120\|Ga0150983_13425480	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012189\|Ga0137388_11468957	Not Available	620	Open in IMG/M
3300012205\|Ga0137362_11661387	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012929\|Ga0137404_11967571	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300014169\|Ga0181531_10255553	Not Available	1069	Open in IMG/M
3300014169\|Ga0181531_10762310	Not Available	603	Open in IMG/M
3300014201\|Ga0181537_10459196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	873	Open in IMG/M
3300014501\|Ga0182024_10010734	All Organisms → cellular organisms → Bacteria → Acidobacteria	18606	Open in IMG/M
3300014501\|Ga0182024_12633178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	539	Open in IMG/M
3300017823\|Ga0187818_10167499	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300017975\|Ga0187782_10099838	All Organisms → cellular organisms → Bacteria → Acidobacteria	2136	Open in IMG/M
3300017975\|Ga0187782_10318468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1175	Open in IMG/M
3300017975\|Ga0187782_11376641	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018012\|Ga0187810_10073541	All Organisms → cellular organisms → Bacteria → Acidobacteria	1316	Open in IMG/M
3300018012\|Ga0187810_10106071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1106	Open in IMG/M
3300018046\|Ga0187851_10513631	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300020579\|Ga0210407_10130921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1924	Open in IMG/M
3300020579\|Ga0210407_10896369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	680	Open in IMG/M
3300020582\|Ga0210395_11356134	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300020583\|Ga0210401_10540588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1027	Open in IMG/M
3300021088\|Ga0210404_10246996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	970	Open in IMG/M
3300021168\|Ga0210406_10314475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1271	Open in IMG/M
3300021170\|Ga0210400_11160871	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300021181\|Ga0210388_10345860	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300021181\|Ga0210388_11195495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	645	Open in IMG/M
3300021388\|Ga0213875_10011456	All Organisms → cellular organisms → Bacteria	4410	Open in IMG/M
3300021404\|Ga0210389_10019914	All Organisms → cellular organisms → Bacteria → Acidobacteria	5182	Open in IMG/M
3300021404\|Ga0210389_10783263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	745	Open in IMG/M
3300021420\|Ga0210394_10012978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	8070	Open in IMG/M
3300021420\|Ga0210394_10021952	All Organisms → cellular organisms → Bacteria → Acidobacteria	5885	Open in IMG/M
3300021420\|Ga0210394_10193877	All Organisms → cellular organisms → Bacteria → Acidobacteria	1771	Open in IMG/M
3300021420\|Ga0210394_10722066	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300021420\|Ga0210394_11491097	Not Available	572	Open in IMG/M
3300021433\|Ga0210391_11288201	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300021433\|Ga0210391_11336461	Not Available	552	Open in IMG/M
3300021477\|Ga0210398_10057276	All Organisms → cellular organisms → Bacteria → Acidobacteria	3189	Open in IMG/M
3300022873\|Ga0224550_1037020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	696	Open in IMG/M
3300025906\|Ga0207699_10079528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2028	Open in IMG/M
3300026294\|Ga0209839_10136592	Not Available	817	Open in IMG/M
3300027370\|Ga0209010_1041467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	785	Open in IMG/M
3300027727\|Ga0209328_10173981	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300027824\|Ga0209040_10232866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	934	Open in IMG/M
3300027826\|Ga0209060_10010016	All Organisms → cellular organisms → Bacteria	5723	Open in IMG/M
3300027842\|Ga0209580_10650076	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300027853\|Ga0209274_10146607	Not Available	1186	Open in IMG/M
3300027854\|Ga0209517_10016877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7185	Open in IMG/M
3300027867\|Ga0209167_10430839	Not Available	720	Open in IMG/M
3300027869\|Ga0209579_10672089	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300027879\|Ga0209169_10005676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7199	Open in IMG/M
3300027889\|Ga0209380_10731214	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027895\|Ga0209624_11114504	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300027903\|Ga0209488_10325480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1145	Open in IMG/M
3300027908\|Ga0209006_10118124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	2343	Open in IMG/M
3300028047\|Ga0209526_10994474	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300029910\|Ga0311369_11304236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	555	Open in IMG/M
3300029943\|Ga0311340_11227236	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300029951\|Ga0311371_10385863	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300029951\|Ga0311371_10411504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1833	Open in IMG/M
3300029999\|Ga0311339_10193610	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300030007\|Ga0311338_11829927	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300030399\|Ga0311353_10538660	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300030618\|Ga0311354_10524369	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300031234\|Ga0302325_10031921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	10822	Open in IMG/M
3300031236\|Ga0302324_100110383	All Organisms → cellular organisms → Bacteria	4626	Open in IMG/M
3300031236\|Ga0302324_100794992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1318	Open in IMG/M
3300031525\|Ga0302326_11949400	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300031708\|Ga0310686_100815099	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031708\|Ga0310686_101647526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15012	Open in IMG/M
3300031715\|Ga0307476_10384279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1036	Open in IMG/M
3300031718\|Ga0307474_10046783	All Organisms → cellular organisms → Bacteria → Acidobacteria	3192	Open in IMG/M
3300031754\|Ga0307475_10156207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1813	Open in IMG/M
3300031962\|Ga0307479_10524073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1168	Open in IMG/M
3300031962\|Ga0307479_10929414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	841	Open in IMG/M
3300032160\|Ga0311301_10000547	All Organisms → cellular organisms → Bacteria → Acidobacteria	141516	Open in IMG/M
3300032160\|Ga0311301_10024632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16377	Open in IMG/M
3300032160\|Ga0311301_10041558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11057	Open in IMG/M
3300032160\|Ga0311301_10205454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	3363	Open in IMG/M
3300032160\|Ga0311301_10318740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	2469	Open in IMG/M
3300032174\|Ga0307470_10043439	All Organisms → cellular organisms → Bacteria → Acidobacteria	2245	Open in IMG/M
3300032180\|Ga0307471_101028098	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300032770\|Ga0335085_10000005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	965776	Open in IMG/M
3300032770\|Ga0335085_10060171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5077	Open in IMG/M
3300032783\|Ga0335079_10210996	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300032783\|Ga0335079_10356657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1585	Open in IMG/M
3300032805\|Ga0335078_10083055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4663	Open in IMG/M
3300032805\|Ga0335078_10185521	All Organisms → cellular organisms → Bacteria → Acidobacteria	2905	Open in IMG/M
3300032805\|Ga0335078_11034359	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300032828\|Ga0335080_11114698	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300032892\|Ga0335081_11058622	Not Available	939	Open in IMG/M
3300032893\|Ga0335069_11383210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	762	Open in IMG/M
3300032895\|Ga0335074_10119143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3424	Open in IMG/M
3300033134\|Ga0335073_10796647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1015	Open in IMG/M
3300033134\|Ga0335073_11439075	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.41%
Host-Associated	Host-Associated	2.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.21%
Aquatic	Environmental → Aquatic	11.21%
Plants	Host-Associated → Plants	2.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Peat	Environmental → Terrestrial → Peat	11.21%
Freshwater	Environmental → Aquatic → Freshwater	10.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.97%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.86%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1004529942	3300004092	Bog Forest Soil	MYCFGDMTDLRIPIGGFFALVGAILGGTGLLANYQSPLESANVNLYCGVSMLIFGAFMLWLARRKSVP*
Ga0062389_1048053861	3300004092	Bog Forest Soil	MNDLRIPIGSFFALVGLILIAVGLAEDYQAPLEPANVNLYCGASMLLFGAVMLALARRKSINRRGAP*
Ga0062386_1000266633	3300004152	Bog Forest Soil	MSIGGFFVLVGAIVGAAGLTADYRAPLEGANVNLYCGVSMLIFGLVMLWLAWRKSRS*
Ga0062388_1026385052	3300004635	Bog Forest Soil	MNDLRVPIGSFFALVGAILCATGLAANYQAPLESENVNLYCGISMLIFGAVMLWLARRKSRS*
Ga0066688_108142461	3300005178	Soil	TLIGLVLAVTGFVTENRAPLESANVNLYCGVTMLVFGGVMLWLARRSSSNN*
Ga0070741_106779401	3300005529	Surface Soil	SAGAAESRLFLMNDLRVPIGFFFALVGAILLVTAFTADYAAPLGSAHVNLYCGLSMLVFGAIMLMLARRRG*
Ga0070733_101163442	3300005541	Surface Soil	MSDLRIPIGSFFALVGAILCVAGLAANYQAPLEPANVNLYCGISMLIFGAAMLWLARRKSRL*
Ga0070732_103684781	3300005542	Surface Soil	TPIGIFFSLVGLILLATGLLTDNRAPLEAANINLYCGATMLVFGGVMLWLARRSA*
Ga0070732_105634401	3300005542	Surface Soil	IPIGLFFALVGLILTGAGAVTGNRAPLETANVNLYCGLSMLVFGGVMLWLARRSS*
Ga0070732_107675582	3300005542	Surface Soil	MSDLRIPIGIFFTLVGLLVGIAGLAASYRAPLESGNVNLYCGISILVFGGVMLWLARRSS
Ga0070732_107825531	3300005542	Surface Soil	MSDLRIPIGIFFTLVGLVLAITGLAVNYRAPLESENLNLYCGISILAFGGVMLWLARRSS
Ga0070764_102519452	3300005712	Soil	MNDLRVPIGSFFALVGAILCATGLAANYEAALESENVNLYCGISMLIFGAVMLWLARRKSRS*
Ga0066789_104431641	3300005994	Soil	SSGDMRDLRIPIGSFFTLTGVILVVTGVVTQNRAPLETANVNLYCGISILAFGGLMLWLARRGS*
Ga0066790_103449781	3300005995	Soil	MRDLRIPIGSFFTLVGVILLLTGAVSGNRAPLETANVNLYCGFSMLLFGGVML
Ga0070717_100569761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGDLRIAIGSFFALVGLILGAVSFAANYQAPLESANVNLYCGVSMLIFGAVMLWLAHRKSRS*
Ga0070765_1005410702	3300006176	Soil	MTDLRIAIGSFFALVGAILCVAGLAADYQAPLESTNVNLYCGISMLIFGAVMLWLARRKARS*
Ga0075425_1017157942	3300006854	Populus Rhizosphere	MTDLRIPIGIFFTLIGLILGITAMAVDYRAPLESGNVNLYCGISILAFGGVMLWLARRSS
Ga0075425_1022187891	3300006854	Populus Rhizosphere	GNMRDLRIPIGVFFSLIGLMVGAMGVATESRAPLETANVNLYCGVTMLLFGGLMLWLARRS*
Ga0073928_110245251	3300006893	Iron-Sulfur Acid Spring	MSDLRIPIGIFFTLVGLLVGITGLVAGYHAPLESANVNLYCGISILVFGGVMLWLARRSS
Ga0099829_108604462	3300009038	Vadose Zone Soil	MSDLRIPIGIFFTLVGLLVGITGLVAGYHAPLESANVNLYCGISILAFGGVMLWLARRSS
Ga0116223_105671302	3300009839	Peatlands Soil	MSDLRIPIGSFFALVGAILCGTGLAANYHAPLESANVNLDCGVSMLIFGAIMLWLARRKSRS*
Ga0074044_110055821	3300010343	Bog Forest Soil	MSDLRVSIGGFFVLVGAIVGATGVAADYRAPLEPDNVNLFCGVSMLIFGAVMLWLAWRKSRL*
Ga0136449_1001454434	3300010379	Peatlands Soil	MRDLRTPIGIFFSLSGAILAITGMATSYRAPLASSNVNLYCGASMLVFGAVMLWLSE*
Ga0150983_134254802	3300011120	Forest Soil	MSDLRNSIGLFFTLVGLIVAITGLLSHAMAPLGSANTDVYCGAAMLVFGGVMLWLARRAL
Ga0137388_114689571	3300012189	Vadose Zone Soil	MSDLRIPIGIFFTLVGLLVGITGLVAGYHAPLESANVNLYCGISILAFGGVMLWLA
Ga0137362_116613872	3300012205	Vadose Zone Soil	MRDLRIPIGIFFTLIGLVLAVTGVVTDNRAPLETANINLYCGVSMLLFGGVMLWLARRSS
Ga0137404_119675712	3300012929	Vadose Zone Soil	MRDLRIPIGAFFTLTGVILAVTGVATQNRAPLETANINLYCGISILIFGGLMLWLARRGS
Ga0181531_102555532	3300014169	Bog	MGDLRISDLRIPIGSFFVLVGAILCVTGLAADYQAPLESANVNLLCGVSMVVFGAIMLLLASRRRRS*
Ga0181531_107623101	3300014169	Bog	MGDLRIAIGSFFVLVGAIVGATGLAANYHARLEPANVNLDCGVSMLIFGAIMLWLAWRKTQ*
Ga0181537_104591961	3300014201	Bog	RVPIGSFLSLVGLILIAVGLVAGYHAPLESANVNLYCGVSMLIFGAVMLWLARRKSIRRRGVP*
Ga0182024_100107349	3300014501	Permafrost	MRDLRTLIGSFFSLAGLILAITGAAASQRAPLEPGNVNLYCGASLLVFGAVMLWLGRRAR
Ga0182024_126331781	3300014501	Permafrost	MNDLRIPIGSFFALVGAILCVAGLAASYQAPLESANVNLYCGISMLIFG
Ga0187818_101674992	3300017823	Freshwater Sediment	MSDLRVSIGGFFVLVGAIVGAAGLTADYRAPLEGANVNLYCGVSMLIFGLVMLWLAWRKSRS
Ga0187782_100998382	3300017975	Tropical Peatland	MSDLRIPIGTFFALVGAILCFVGAATGYQAPLESANVNLYCGISMLTFGALMLWIARRKSHTRV
Ga0187782_103184681	3300017975	Tropical Peatland	MNDLRLAIGSFFALIGAILCVTGLILDYRAPLESANVNLDCGILMLIFGAIMLWLARSRA
Ga0187782_113766412	3300017975	Tropical Peatland	MSDLRVSIGGFFVLVGAIVGATGLTADYRAPLERANVNLYCGISMLIFGLMMLWLARRKSRS
Ga0187810_100735413	3300018012	Freshwater Sediment	MNDLRIPIGIFFALVGAILCAAGLGANYQAPLEPANVNLYCGASMLIFGAVMLGLARRKSRM
Ga0187810_101060711	3300018012	Freshwater Sediment	MNDLRVPIGSFFALVGAILSAAGLVANYQAPLESANVNLYCGISMLIFGAVM
Ga0187851_105136312	3300018046	Peatland	MGDLRIAIGGFFVLVGAIVGITGLAANYHARLESANVNLDCGVSMLSFGAIMLWLAWRKT
Ga0210407_101309212	3300020579	Soil	MSDLRLPIGIFFTLVGLLVGITGLVAGYHAPLESANVNLYCGISILVFGGVMLWLARRSS
Ga0210407_108963692	3300020579	Soil	MRDLRTPIGLFFTLAGVILAVTGVVTENRAPLETANVNLYCGVSILIFGGVMLWLARRSS
Ga0210395_113561341	3300020582	Soil	MNDLRVPIGSFFALVGAILCATGLAANYEAALESENVNLYCGISMLIFGA
Ga0210401_105405881	3300020583	Soil	MSDLRIPIGIFFTLVGLLVGITGLAAAYRAPLEFANVNLYCGISMLVFGGVMLWLARRSS
Ga0210404_102469962	3300021088	Soil	MSDLRIPIGVFFTLVGLLVGITGLVAGYHAPLESENVNLYCGISILVFGGVMLWLARRSS
Ga0210406_103144752	3300021168	Soil	MSDLRIPIGIFFTLVGLLVGITGLVAGYHAPLESENVNLYCGISILVFGGVMLWLARRSS
Ga0210400_111608712	3300021170	Soil	MSDLRVSIGGFFVLVGAIVGATGLAADYRAPLGPANVDLYCGVSMLIFGLVMLWLAWRKSGS
Ga0210388_103458602	3300021181	Soil	MNDLRIPIGSFFALVGLILIAVGLAEDYQAPLEPANVNLYCGLSMLIFGAVMLALARRKSINRRGAP
Ga0210388_111954952	3300021181	Soil	MNDLRVPIGSFFALVGAILCATGLAANYQAPLESENVNLYCGISMLIFGAVMLWLARRKSRS
Ga0213875_100114566	3300021388	Plant Roots	IFFVLVGAILCITGLAANYQAPLESLNVNLDCGLAMLIFGGMMLWLARRPVRS
Ga0210389_100199145	3300021404	Soil	MSDLRIPIGIFFTLVGLVVGITGLAAAYRAPLEFANVNLYCGISMLVFGGVMLWLARRSS
Ga0210389_107832631	3300021404	Soil	MTDLRVPIGSFFTLVGAILCVTGLAANYRAPLESANVNLFCGVSMLIFGAVMLWLARRKS
Ga0210394_100129782	3300021420	Soil	MSDLRVTIGSFFVLVGAIVGATGLAAGYQAPLESANVNLYCGISMLLFGGVMLWLAWLKSRS
Ga0210394_100219524	3300021420	Soil	MTDLRIAIGSFFALVGAILCVAGLAADYQAPLESTNVNLYCGISMLIFGAVMLWLARRKARS
Ga0210394_101938772	3300021420	Soil	MSDLRVTIGGFFVLVGAIVGGTGLAAGYQAPLESANVNLYCGVSMLLFGGVMLWLAWLKSRS
Ga0210394_107220662	3300021420	Soil	DLRTPIGLFFPLAGVILAVTGVVTENRAPLETANVNLYCGVSILIFGGVMLWLARRSS
Ga0210394_114910972	3300021420	Soil	MNDLRIPIGSFFALVGAILCATGLGANHQAPLGPANVNLYCGASMLVFGAVM
Ga0210391_112882012	3300021433	Soil	MNDLRIPIGSFFALVGLILVAVGLAADYQARLEPANVNLYCGASMLIFGAVMLWLGRRKWINRRDES
Ga0210391_113364612	3300021433	Soil	MNDLRIPIGSFFALVGLILIAVGLAEDYQAPLEPANVNLYCGLSMLIFGAVMLALARR
Ga0210398_100572765	3300021477	Soil	MNDLRVPIGSFFALVGAFLCATGLAANYQAPLESENVNLYCGISILIFGAVMLWLARRKSRS
Ga0224550_10370201	3300022873	Soil	MSDLRVSIGGFFVLVGAIVSATGLIADYRAPLDFANVDLYCGVSMLIFG
Ga0207699_100795282	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPDLRIPIGIFFTLVGLLVGITGLAAGYHAPLESENVNLYCGISILVFGGVMLWLARRSS
Ga0209839_101365922	3300026294	Soil	MRDLRIPIGSFFTLTGVILVVTGVVTQNRAPLETANVNLYCGISILAFGGLMLWLARRGS
Ga0209010_10414671	3300027370	Forest Soil	MSDLRVTIGGFFVLVGAIVAATGLVANYHARLEPANVNLDCGISMLIFGAIMLWLAWRKA
Ga0209328_101739812	3300027727	Forest Soil	MSDLRIPIGIFFALVGLLVGITGLAAGYRAPLEFANVNLYCGISMVIFGGVMLWLARRSS
Ga0209040_102328662	3300027824	Bog Forest Soil	MSIGGFFVLVGAIVGAAGLTADYRAPLEGANVNLYCGVSMLIFGLVMLWLAWRKSRS
Ga0209060_100100162	3300027826	Surface Soil	MRDLRTPIGLFFALAGVILAVTGLVTGNRAPLETANVNLYCGVSILIFGGVMLWLARRRT
Ga0209580_106500762	3300027842	Surface Soil	MSDLRIPIGIFFTLVGLVLAITGLAVNYRAPLESENLNLYCGISILVFGGVMLWLARRSS
Ga0209274_101466071	3300027853	Soil	MSDLRVTIGGFFVLVGAIVGATGLIADYRAPLDFANVDLYCGLSMLIFGAIMLWLAWHKS
Ga0209517_100168772	3300027854	Peatlands Soil	MSDLRTTIGAFFVLVGAIVAVTGLAANYEAPLGSANVNLYCGVSMFIFGAVMLWLAWRKSRSSE
Ga0209167_104308392	3300027867	Surface Soil	MSDLRIPIGSFFALVGAILCVAGLAANYQAPLEPANVNLYCGISMLIFGAAMLWLARRKSRL
Ga0209579_106720892	3300027869	Surface Soil	MSDLRIPIGIFFTLVGLLVGITGLAAGYRAPLEFANVNLYCGISMLVFGGLMLWLARRSS
Ga0209169_100056766	3300027879	Soil	MNDLRVPIGSFFALVGAILCATGLAANYEAALESENVNLYCGISMLIFGAVMLWLARRKSRS
Ga0209380_107312142	3300027889	Soil	MCGSGEIMNDLRVPIGSFFALVGAILCATGLAANYQAPLESENVNLYCGISMLIFGAVMLWLARRKSRS
Ga0209624_111145042	3300027895	Forest Soil	MNDLRIPIGSFFALVGLILIAVGMAANYQAPLESANVNLDCGVSMLIFGAVMLGLARRKSINRRGAP
Ga0209488_103254802	3300027903	Vadose Zone Soil	MSDLRIPIGIFFTLVGLLVGITGLVAGYHAPLESANLNLYCGISILVFGGVMLWLARRSS
Ga0209006_101181242	3300027908	Forest Soil	MNDLRIPIGSFFGLVGAILCVTGLAANYQAPLESDNVNLYCGISMLIFGAVMLWLARRKARL
Ga0209526_109944742	3300028047	Forest Soil	MRDLRRPIGIFFSLSGAILTITGIATGYRAPLESANVNLYCGASMLIFGAVMLWLSE
Ga0311369_113042361	3300029910	Palsa	MNDLRVPIGSFFALVGAILCATGLAANYQAPLELENVNLYCGVSMLIFGAV
Ga0311340_112272361	3300029943	Palsa	SIGGFFVLVGLIVGVTGLTANYRAPLDFANVNLYCGISMLIFGTIMLWLAWRKAR
Ga0311371_103858631	3300029951	Palsa	IGSFFSLVGLILIAVGLVASYQAPLESANVNLYCGVSMLIFGAVMLWLARRKSIRRRDAP
Ga0311371_104115042	3300029951	Palsa	MSDLRVTIGGFFVLVGAIVGVTGLVANYHARLEPANVNLDCGLSMLLFGAIMLWLAWRK
Ga0311339_101936102	3300029999	Palsa	MSDLRVTIGGFFVLVGAIVGVTGLVANYHARLEPANVNLDCGLSMLLFGAIMLWLAWRKS
Ga0311338_118299271	3300030007	Palsa	MSDLRIPIGSFFALVGAILCVAGLAANYQAPLESANVNLYCGISMLIFGAVMLWMARRKARS
Ga0311353_105386602	3300030399	Palsa	MNDLRVPIGSFFALVGAILCATGLAANYQAPLELENVNLYCGVSMLIFGAVMLWLARRKSRS
Ga0311354_105243692	3300030618	Palsa	MSDLRVSIGGFFVLVGLIGLTANYRAPLDFANVNLYCGISMLIFGTIMLWLAWRKAR
Ga0302325_100319214	3300031234	Palsa	MSDLRVSIGGFFVLVGLIVGVTGLTANYRAPLDFANVNLYCGISMLIFGTIMLWLAWRKA
Ga0302324_1001103833	3300031236	Palsa	MSDLRIPIGIFFTLVGAILCIAGLAANYQAPLQFTNVNLYCGISMLIFGAAMLALARRKSRS
Ga0302324_1007949922	3300031236	Palsa	MSDLRIAIGSFFALVGAILCVAGLAANYQAPLESTNVNLYCGISMLIFGAVMLWLAYRKARS
Ga0302326_119494001	3300031525	Palsa	RVTIGGFFVLVGLIVGVTGLAANYRAPLDFANVDLYCGISMLIFGAIMLWLAWRKAR
Ga0310686_1008150992	3300031708	Soil	MSDLRIPIGIFFTLVGLLVGITGLATAYRAPLEFANVNLYCGISMLVFGGVMLWLARRSS
Ga0310686_1016475266	3300031708	Soil	MSDLRVSIGGFFVLVGAIVGATGLAADYRAPLEAANVNLYCGVSMLIFGLVMLWLAWRKSRS
Ga0307476_103842792	3300031715	Hardwood Forest Soil	MRDLRTPIGLFFTLAGVILAVTGVATENRAPLETANVNLYCGVSILIFGGVMLWLARRSS
Ga0307474_100467833	3300031718	Hardwood Forest Soil	MNDLRVPIGGFFALVGAILCGVGLAANFEAPLESANVNLDCGISMLIFGAVMLWLARRKSRL
Ga0307475_101562072	3300031754	Hardwood Forest Soil	MSDLRIPIGIFFTLVGLLVGITGLAAGYRAPLESANVNLYCGISILVFGGVMLWLARRSS
Ga0307479_105240732	3300031962	Hardwood Forest Soil	MPDLRIPIGIFFTLVGLLVGMTGLVAGYRAPLESENVNLYCGISILAFGGVMLWLARRSS
Ga0307479_109294142	3300031962	Hardwood Forest Soil	MRDLRTPIGIFFLLTGAILAITGIATGYRAPLEAANVNLYCGAAMLVFGAVML
Ga0311301_1000054714	3300032160	Peatlands Soil	MSDLRIPIGSFFALVGAILCGTGLAANYHAPLESANVNLDCGVSMLIFGAIMLWLARRKSRS
Ga0311301_100246327	3300032160	Peatlands Soil	MCGFGDMSDLRTTIGAFFVLVGAIVAVTGLAANYEAPLGSANVNLYCGVSMFIFGAVMLWLAWRKSRSSE
Ga0311301_100415587	3300032160	Peatlands Soil	MSDLRVTIGGFFVVVGAIVGGTGLAAGYQAPLESANVNLYCGVSMLLFGGFMLWLAWLKSRS
Ga0311301_102054543	3300032160	Peatlands Soil	MGDLRTPIGIFFTVAGLILAITSVASGSRAPLETANVNLYCGIPILVFGGIMLWLARRNS
Ga0311301_103187402	3300032160	Peatlands Soil	MRDLRTPIGIFFSLSGAILAITGMATSYRAPLASSNVNLYCGASMLVFGAVMLWLSE
Ga0307470_100434392	3300032174	Hardwood Forest Soil	MSDLRIPIGSFFGLVGAILCVTGLAKNYRAPLESENVNLYCGISMLIFGAVMLWLARRKARS
Ga0307471_1010280982	3300032180	Hardwood Forest Soil	MSDLRIPIGIFFTLVGLLVGITGLAAGYHAPLESENVNLYCGSSILVFGGVMLWLARRSS
Ga0335085_10000005726	3300032770	Soil	MNDLRVPIGGFFTLVGAILAVTGVASGGRARLETANVNLYCGAALLVFGCVMLLLAHRKS
Ga0335085_100601713	3300032770	Soil	MSDLRRPIGIFFSLSGVIVAVTGIASSHRAPLESANVNLYCGIAMLVFGLVMLWLSD
Ga0335079_102109963	3300032783	Soil	MRDLRTPIGLFFALVGLIVTATGFSQNRAPLEPAQVNLYCGASMLIFGAVMLWLARRSS
Ga0335079_103566572	3300032783	Soil	MSDLRRPIGIFFSLSGVIVAVTGIASSHRAPLESANVNLHCGIAMLVFGLVMLWLSD
Ga0335078_100830552	3300032805	Soil	MFCSGDMRDLRTPIGGFFSLAGIILAISGLATSQRAPLESANVDLYCGACILLFGVIMLWLGRRPHG
Ga0335078_101855212	3300032805	Soil	MNDLRVPIGGFFTLVGAILALTGVAGGGRARLETANVNLYCGAALLVFGCVMLLLAHRKS
Ga0335078_110343592	3300032805	Soil	MNDLRVPIGSFFALVGAILLVTAFAADYAAPLGSAHVNLYCGLSMLVFGAIMLGLALRRG
Ga0335080_111146982	3300032828	Soil	RTSIGFFFALTGIILLITSGTSDSRAPLEAANVNLYCGASMLLFGGVMLWLARRSS
Ga0335081_110586221	3300032892	Soil	TFCSRDMSDLRRPIGIFFSLSGVIVAVTGIASSHRAPLESANVNLYCGIAMLVFGLVMLWLSD
Ga0335069_113832102	3300032893	Soil	MNDLRTPIGTFFSLSGLILAITGLASSYRAPLESANINLYCGAAMLVFGVFMLWLSD
Ga0335074_101191432	3300032895	Soil	MNDLRVPIGIFFALVGAILCATGLTVDYRAPLETANVNLYCGVSMLIFGAVMLGLARRKSRS
Ga0335073_107966472	3300033134	Soil	MNDLRIPIGSFFALVGAILLVTAFTADYTAPLESANVNLDCGIAMLVFGASMLALARRNRFRTSVTPLP
Ga0335073_114390752	3300033134	Soil	MNDLRIPIGAFFSIAGVVLCVTGVATGYRARLEPDNVNLYCGILILVFGAVMLWLARRKSTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences