Metagenome / Metatranscriptome Family F078849

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078849
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	66 residues
Representative Sequence	KPFAKQPAKGDLVLPGVTLHLLDDVNQNIAATAIRQAVAAKRPIKKFVPESVEEYIKKEGLYGR
Number of Associated Samples	106
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	93.97 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.828 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.207 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.828 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.65% β-sheet: 2.17% Coil/Unstructured: 77.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02410	RsfS	70.69
PF02590	SPOUT_MTase	8.62
PF13742	tRNA_anti_2	0.86
PF02572	CobA_CobO_BtuR	0.86
PF13620	CarboxypepD_reg	0.86
PF13847	Methyltransf_31	0.86
PF14310	Fn3-like	0.86
PF04075	F420H2_quin_red	0.86
PF00275	EPSP_synthase	0.86
PF01401	Peptidase_M2	0.86
PF13185	GAF_2	0.86
PF01039	Carboxyl_trans	0.86
PF17189	Glyco_hydro_30C	0.86
PF01209	Ubie_methyltran	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	70.69
COG1576	23S rRNA pseudoU1915 N3-methylase RlmH	Translation, ribosomal structure and biogenesis [J]	8.62
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.86
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.86
COG2109	ATP:corrinoid adenosyltransferase	Coenzyme transport and metabolism [H]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.86
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.59 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	47.41 %
Unclassified	root	N/A	5.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	47.41 %
Unclassified	root	N/A	5.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	47.41 %
Unclassified	root	N/A	5.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	39.66 %
Unclassified	root	N/A	5.17 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	22.41 %
Unclassified	root	N/A	5.17 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	1.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	22.41 %
Unclassified	root	N/A	5.17 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02FRI6V	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	501	Open in IMG/M
3300001979\|JGI24740J21852_10192150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	506	Open in IMG/M
3300002914\|JGI25617J43924_10232109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	619	Open in IMG/M
3300004091\|Ga0062387_100306931	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300004091\|Ga0062387_101192896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	596	Open in IMG/M
3300004479\|Ga0062595_100045293	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300004635\|Ga0062388_102819000	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005176\|Ga0066679_10218168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1221	Open in IMG/M
3300005329\|Ga0070683_100745747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	938	Open in IMG/M
3300005332\|Ga0066388_103310533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	823	Open in IMG/M
3300005355\|Ga0070671_101206678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	666	Open in IMG/M
3300005367\|Ga0070667_101948193	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005436\|Ga0070713_101128895	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005436\|Ga0070713_101954933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	569	Open in IMG/M
3300005437\|Ga0070710_10902578	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005440\|Ga0070705_100315651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1126	Open in IMG/M
3300005454\|Ga0066687_10972901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	506	Open in IMG/M
3300005468\|Ga0070707_101565925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	626	Open in IMG/M
3300005534\|Ga0070735_10087452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1977	Open in IMG/M
3300005539\|Ga0068853_100140783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2165	Open in IMG/M
3300005539\|Ga0068853_100667162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	990	Open in IMG/M
3300005549\|Ga0070704_100823667	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	831	Open in IMG/M
3300005552\|Ga0066701_10793300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	564	Open in IMG/M
3300005569\|Ga0066705_10462527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	795	Open in IMG/M
3300005607\|Ga0070740_10197628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	844	Open in IMG/M
3300005614\|Ga0068856_100266615	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300005764\|Ga0066903_103406149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	858	Open in IMG/M
3300005764\|Ga0066903_106342937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	617	Open in IMG/M
3300005921\|Ga0070766_10005541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6385	Open in IMG/M
3300006028\|Ga0070717_11462011	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006031\|Ga0066651_10204825	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300006032\|Ga0066696_10437754	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300006032\|Ga0066696_10765164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	617	Open in IMG/M
3300006237\|Ga0097621_101526641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634	Open in IMG/M
3300006755\|Ga0079222_10763040	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300006755\|Ga0079222_10824090	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006800\|Ga0066660_10754164	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300007982\|Ga0102924_1067824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1958	Open in IMG/M
3300009012\|Ga0066710_102167120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	813	Open in IMG/M
3300009090\|Ga0099827_10404203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300009101\|Ga0105247_11548121	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300009177\|Ga0105248_10549778	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300009683\|Ga0116224_10618154	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300009826\|Ga0123355_10484896	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300010359\|Ga0126376_10186399	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300010373\|Ga0134128_10130702	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300010398\|Ga0126383_12919817	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010398\|Ga0126383_13391199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012203\|Ga0137399_11456490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	571	Open in IMG/M
3300012212\|Ga0150985_122747333	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012350\|Ga0137372_10393843	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300012354\|Ga0137366_10356329	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012360\|Ga0137375_10077232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3488	Open in IMG/M
3300012469\|Ga0150984_114491135	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012582\|Ga0137358_10848704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	603	Open in IMG/M
3300012929\|Ga0137404_11193081	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012930\|Ga0137407_12356684	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012957\|Ga0164303_10748007	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012986\|Ga0164304_10761324	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300013102\|Ga0157371_11024995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	630	Open in IMG/M
3300013104\|Ga0157370_10753314	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300015262\|Ga0182007_10408652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	518	Open in IMG/M
3300015372\|Ga0132256_100654879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1166	Open in IMG/M
3300016422\|Ga0182039_11294035	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300017930\|Ga0187825_10420487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	516	Open in IMG/M
3300017936\|Ga0187821_10087494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1140	Open in IMG/M
3300018468\|Ga0066662_10387069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1222	Open in IMG/M
3300019877\|Ga0193722_1130919	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	567	Open in IMG/M
3300020012\|Ga0193732_1039442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	812	Open in IMG/M
3300020580\|Ga0210403_10508589	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300020580\|Ga0210403_10634712	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300020583\|Ga0210401_11124476	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021168\|Ga0210406_11238553	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300021171\|Ga0210405_10007739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9394	Open in IMG/M
3300021403\|Ga0210397_10694379	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300021403\|Ga0210397_11513956	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021420\|Ga0210394_10270490	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300021433\|Ga0210391_11492197	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300021560\|Ga0126371_11172237	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300022722\|Ga0242657_1043120	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300025134\|Ga0207416_1053551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1668	Open in IMG/M
3300025898\|Ga0207692_10114536	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300025898\|Ga0207692_10638860	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300025904\|Ga0207647_10024371	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300025906\|Ga0207699_11100052	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300025926\|Ga0207659_11160243	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300025927\|Ga0207687_10269853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1360	Open in IMG/M
3300025928\|Ga0207700_10579166	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300025932\|Ga0207690_11653982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	535	Open in IMG/M
3300025941\|Ga0207711_11131598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	724	Open in IMG/M
3300025944\|Ga0207661_10019831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5017	Open in IMG/M
3300025949\|Ga0207667_10427685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1347	Open in IMG/M
3300026041\|Ga0207639_11654403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	600	Open in IMG/M
3300026078\|Ga0207702_10174598	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300026313\|Ga0209761_1122435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1262	Open in IMG/M
3300026318\|Ga0209471_1122978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1102	Open in IMG/M
3300026322\|Ga0209687_1253614	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026482\|Ga0257172_1110205	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026542\|Ga0209805_1214335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	815	Open in IMG/M
3300027867\|Ga0209167_10026532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2769	Open in IMG/M
3300028800\|Ga0265338_10081387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2716	Open in IMG/M
3300031057\|Ga0170834_107182177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	703	Open in IMG/M
3300031474\|Ga0170818_100867150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2963	Open in IMG/M
3300031720\|Ga0307469_11155489	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031754\|Ga0307475_10381416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1133	Open in IMG/M
3300031820\|Ga0307473_10360984	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M
3300031823\|Ga0307478_11473896	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300032174\|Ga0307470_10240114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1189	Open in IMG/M
3300032421\|Ga0310812_10032671	All Organisms → cellular organisms → Bacteria → Acidobacteria	1918	Open in IMG/M
3300033412\|Ga0310810_10483228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1240	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.86%
Host-Associated	Host-Associated	23.28%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.83%
Plants	Host-Associated → Plants	22.41%
Aquatic	Environmental → Aquatic	6.03%
Arthropoda	Host-Associated → Arthropoda	0.86%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.62%
Freshwater	Environmental → Aquatic → Freshwater	4.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.86%
Roots	Host-Associated → Plants → Roots	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.17%
Loam	Environmental → Terrestrial → Soil → Loam	14.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.72%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.72%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.86%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_03837230	2170459015	Switchgrass, Maize And Mischanthus Litter	SRPRSPHVTQAVLQQPAQGDLVLSGATVHLLDSVHQPISATAIRQAAAAKKPLKKFVDPQVEEYIKKMGLYR
JGI24740J21852_101921501	3300001979	Corn Rhizosphere	KQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLYG*
JGI25617J43924_102321091	3300002914	Grasslands Soil	FARQPAKGDLVLPGVTLHLLDDVNQKISATEIRKAVRGKRPLKKLVPESVEEYIKKERLYA*
Ga0062387_1003069312	3300004091	Bog Forest Soil	KPFAKQPAQGDLVLPGVTVHLLDGVQQNVSATAIRGAISSKRSLAKFVDPAVGEYIRKTGLYGGR*
Ga0062387_1011928962	3300004091	Bog Forest Soil	FAKQPAKGDLVLPGATVHLLENVHQNVSATAIRDAVAAKKPLTKFVDSAVAQYIKKEGLYRGR*
Ga0062595_1000452931	3300004479	Soil	SALPEKLRPRAEVTKPFSKQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLYG*
Ga0062388_1028190002	3300004635	Bog Forest Soil	KQPAQGDLVLPGVTVHLLDGVQQNVSATAIREAVRGKKSLAKFVDPAVGEYIGKMGLYQGRT*
Ga0066679_102181681	3300005176	Soil	KQPAKGDLVLTGATVHLLESVHYDISATKVREAVAAGKPLGKFLDPAVREYIKKTGLYRTGP*
Ga0070683_1007457473	3300005329	Corn Rhizosphere	FSKQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLYG*
Ga0066388_1033105331	3300005332	Tropical Forest Soil	DVAVSLPERFRPREEVTRPFVKRPAEGDLVLPGVTLHLLGNVHQNVSATEVRKAVAAKRPIKKFVPESVEEYIKKEGLYSG*
Ga0070671_1012066782	3300005355	Switchgrass Rhizosphere	SVSQPFAKQPAKGDLVLRGATIHLLENVHQSVSATAIREAVAAKKPLRKFVDAPVEEYIKKEGLYL*
Ga0070667_1019481931	3300005367	Switchgrass Rhizosphere	LVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS*
Ga0070713_1011288951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RPREEVTKPFSKQPAKGDLVLPGATLHLLDGVNQNVSATAIRQALAGKKPVKKYLPESVEEYIKKEGLYGD*
Ga0070713_1019549332	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ATKPFARQPAKGDLVLPGVTLHLLDDVNQKISATEIRKALRGKLPLKRLVPESVEEYIKKERLYA*
Ga0070710_109025781	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	PGVTLHLLDDVNQNISATAIRQALASKKAVKKYVPESVEEYIKKEGLYGIGRSGD*
Ga0070705_1003156513	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FAKQPASGDLVLSGATIHLLDNVHQAVSATAIREAVVAKKPLRKFVDAAVEEYIKKEGLYLSR*
Ga0066687_109729012	3300005454	Soil	KGDLVLPGATVHLLDDVNQKVSATAIRTAVAAKKPIRKFVPESVEEYIKKEGLYFRRSS*
Ga0070707_1015659251	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FAKQPAKGDLVLRGATVHLLENVHQPVSATAIRDAVAAKKRLRKFVDAAVEEYIKKAGLYS*
Ga0070735_100874521	3300005534	Surface Soil	DAVTKPFAKQPAKGDLVLPGVTLHLLDDVNQNVSATAIRQAAAAKRPIKKFVPESVEEYIKKEGLYA*
Ga0068853_1001407831	3300005539	Corn Rhizosphere	LRPREEITKPFSKQPAKGDLALPGVTLHLLDNVNQNVSATAIRQALADKKPVRKYVPESIEEYIKKEGLYGN*
Ga0068853_1006671623	3300005539	Corn Rhizosphere	FLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS*
Ga0070704_1008236671	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	QPAKGDLVLSGATIHLLENVHQAVSATAIREAVAAKKPLRKFVDAAVEEYIKKEGLYL*
Ga0066701_107933001	3300005552	Soil	KQAAKGDLVLPGATVHLLEGVHQDISATAIREAASKGKPLKKFLDPAVAEYIRKMELYKT
Ga0066705_104625272	3300005569	Soil	KPFAKQPAKGDLVLPGVTLHLLDDVNQNIAATAIRQAVAAKRPIKKFVPESVEEYIKKEGLYGR*
Ga0070740_101976282	3300005607	Surface Soil	EVTKPFARQPAKGDLVLPGVTLHLLDDVNQNVSATAIRQAVAAKKPIKKFVPESVEEYIKKEGLYTR*
Ga0068856_1002666151	3300005614	Corn Rhizosphere	PFAKQPAKGDLVLRGATIHLLENVHQSVSATAIREAVAAKKPLRKFVDAPVEEYIKKEGLYL*
Ga0066903_1034061491	3300005764	Tropical Forest Soil	SVTKPFAKQPAAGDLVLPGVTVHLLDDVHQNISATAIRQAAAAGRALTRYVDPLVEHYIKKMGLYGKSA*
Ga0066903_1063429372	3300005764	Tropical Forest Soil	DLATSLPEKLRPREEVTKPFAKQPAKGDLVLSGVTLHLLDDVKQNISATTIRAAVAAKRPIKKFLPESVEEYIKKEGLYV*
Ga0068863_1006128001	3300005841	Switchgrass Rhizosphere	SGDLVLSGATIHLLDNVHQAVSATAIREAVVAKKPLRKFVDAAVEEYIKKEGLYLSR*
Ga0070766_100055419	3300005921	Soil	PFAKQPAKGDLVLAGATVHLLEGLHQNVSSTAIRDTVAAKKPLMKFVDPAVAGYIKKEGLYRSR*
Ga0070717_114620112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QPAKGDLVLRGATVRLLDGVHQPVSATAIREAVVAKKPLRKFVDAGVEEYIRKQGLYL*
Ga0066651_102048251	3300006031	Soil	GDLVLSGVTVHLLENVHQAVSASSIRESIMTKKPLRKFVDTAVEEYIKKEALYGGRSY*
Ga0066696_104377541	3300006032	Soil	VKQPAKGDLVLSGVTVHLLENVHQAVSASSIRESIMTKKPLRKFVDTAVEEYIKKEALYGGRSY*
Ga0066696_107651641	3300006032	Soil	VIKPFSKQPAKGDLVLSGARVHLLDSVHQPISATAIRQAAAAKKPLKKFVDPPVEEYIKKIGLYK*
Ga0097621_1015266412	3300006237	Miscanthus Rhizosphere	DVATALPEKLRPRSEITKPFARQPARGDLVLQGVTLHLLDDINQNISATAIRAAVATKRPIRKFVPESVEEYIKKEALYGK*
Ga0079222_107630402	3300006755	Agricultural Soil	PREEVTKPFAKQPARGDLVLPGVTLHLLDGVNQNISATAIRQAIAAKRPIKKFVPESVEEYIKKERLYGTG*
Ga0079222_108240902	3300006755	Agricultural Soil	DLVLPGATLHLLDGVNQNVSATAIRQALAGKKPVKKYLPESVEEYIKKEGLYGD*
Ga0066660_107541642	3300006800	Soil	KQPAAGDLVLPGVTLHLLDNVNQKISATEIRGAVRAKRPIKRFVRENVEEYIKKEGLYV*
Ga0102924_10678245	3300007982	Iron-Sulfur Acid Spring	PEKLRPRGEITKPFSKQPAKGDLALPGVTLHLLDNVNQNISASAVREAVAAKRPIKKFVPESVEEYIKKEGLYTR*
Ga0066710_1021671202	3300009012	Grasslands Soil	LDSKLLTTKPFSKQPAKGDLVLPGATVHLLDDVNQKVSATAIRTAVAAKKPIRKFVPESVEEYIKKEGLYFRRSS
Ga0099827_104042033	3300009090	Vadose Zone Soil	KQAAKGDLVLPGATVHLLEGVHQDISATAIREAASKGKPLTKFLDPAVAEYIRKMELYKT
Ga0105247_115481212	3300009101	Switchgrass Rhizosphere	PRAEVTKPFSKQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLYG*
Ga0105248_105497781	3300009177	Switchgrass Rhizosphere	DVASALPEKLRPRAEVTKPFSKQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLYG*
Ga0116224_106181541	3300009683	Peatlands Soil	KQAAKGDLVLPGATVHLLENVHQNISATAIRDAVAAKRSLAKFVDPAVADYIKKMGLYRSR*
Ga0123355_104848963	3300009826	Termite Gut	PFSKQPAAGDLVLPGVTLHLVDDVHRKVSATAIRQAVRAKRSIHKFVPESVEEYIQKEGLYSR*
Ga0126376_101863991	3300010359	Tropical Forest Soil	DVASALSDKLRPRVEVTKPFSRQPATGDLVLPGVTLHLLDSVHQKVSATEIRAAVRAKRAIKKLVPETVEQYIKKEGLYA*
Ga0134128_101307025	3300010373	Terrestrial Soil	LADVATALPEKLRPREEVTKPFSKQPAKGDLVLPGVTLHLLDDVNQNISATAIRQALASKKAVKKYVPESVEEYIKKEGLYGD*
Ga0126383_129198171	3300010398	Tropical Forest Soil	FAKQPAKGDLVLSGVSLHLLENVHQPISATAIRQAAAAKRPLKKFVPAAVEEYIKKMGLYRS*
Ga0126383_133911991	3300010398	Tropical Forest Soil	VTKPFARQPAKGDLVLPGVTLHLLDGLNQNISATAIRQAFAANRSIKKFVPESVEEYIKKEKLYGIG*
Ga0137383_112696561	3300012199	Vadose Zone Soil	KGDLVLPGATVHLLEGVHQDISATAIREAASKGKPLKKFLHPAVAEYIRKMELYKT*
Ga0137399_114564901	3300012203	Vadose Zone Soil	EKIRPPESVSQLFAKQPATGDLVLNGATIHLLENVHQAVSATAIREAVVAKKPLRKFVDAAVEEYIKKEGLYLG*
Ga0150985_1227473331	3300012212	Avena Fatua Rhizosphere	AKGDLVLPGATVHLLDDINQNISATAIRSAVAAKKPIRKFVPENVEEYIKKEGLYLR*
Ga0137372_103938433	3300012350	Vadose Zone Soil	KPFAKQPAKGDLVLPGVALHLLYDVNQNISATAIRRAIAAKKPIRKFVPESVEEYIKKEGLYGIG*
Ga0137366_103563291	3300012354	Vadose Zone Soil	TKPFAKQPAKGDLVLPGVALHLLDDVNQNISATAIRRAIAAKKPIRKFVPESVEEYIKKEGLYGIG*
Ga0137375_100772321	3300012360	Vadose Zone Soil	EEFRPRAEITKPFAKQPAKGDLVLPGVCLHLLDDVNQKISATEIRSAVAAKRPFKKFVPESVEEYIKKEGLYH*
Ga0150984_1144911352	3300012469	Avena Fatua Rhizosphere	LPGVTLHLLDSVNQKISATEIRGAVRAKRPIKKFVPENVEEYIKKEGLYAGAAASS*
Ga0137358_108487042	3300012582	Vadose Zone Soil	APAVSQPFAKQPAKGDLVLRGATVHLLENVHQPVSATAIRDAVAAKKRLRKFVDAAVEEYIKKAGLYS*
Ga0137404_111930811	3300012929	Vadose Zone Soil	FAKQPAKGDLVLRGATVHLLDSVHQPVSATAIREAVVAKKALRKFVDAGVEEYIRKQALYS*
Ga0137407_123566841	3300012930	Vadose Zone Soil	QPARGDLVLSGATVHLLDNVHQPVSATAIRDAVVAKKPLRKFVDGGVEEYIRKQGLYC*
Ga0164303_107480072	3300012957	Soil	KQPARGDLVLSGATIHLLENVHQAVSATAIREAVAAKKPLRKFVDAAVEEYIKKEGLYL*
Ga0164304_107613241	3300012986	Soil	PPHSVSQPFAKQPASGDLVLSGATIHLLDSVHQAVSATAIREAVVAKKPLRKFVDAAVEEYIKKEGLYLNR*
Ga0157371_110249952	3300013102	Corn Rhizosphere	SLADVASALPERLRPRSEVTKPFLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS*
Ga0157370_107533143	3300013104	Corn Rhizosphere	ARGDLVLPGVTLHLLDDINQNISATAIRAAVATKRPIRKFVPESVEEYIKKEALYGK*
Ga0182007_104086522	3300015262	Rhizosphere	PRPEVTKPFIKQPASGSLVLPGVTVHLLDNVNQNVSATAIRQAMAAKRPIKKFVPENVEEYIKKEGLYGQSADT*
Ga0132256_1006548791	3300015372	Arabidopsis Rhizosphere	QPAKGDLVLRGATVHLLENVRQPVSATAIRDAVVAKKALRKYVDAGVEEYIRKQGLYG*
Ga0182039_112940351	3300016422	Soil	DVAGALPEKLRPREEVTKPFAKQPAKGDLVLPGVAVHLVDNLNLNISATAIREALARKRPITRWVPESVEEYIKKEGIYRPDQQPSDTE
Ga0187825_104204872	3300017930	Freshwater Sediment	RPRNEVTKPFAKQPAKGDLVLPGVTLHLLDNVNQNISATAIRQAVAAKRPLKKFVPESVEEYIKKEGLYV
Ga0187821_100874943	3300017936	Freshwater Sediment	TKPFAKQPARGDLVLRGATVRLLEGVHHPASATAIRQAASANRPLKRFVDPRVEEYIRKMELYR
Ga0066662_103870693	3300018468	Grasslands Soil	PRIEVTKPFAKQPAKGDLVLPGVTLHLLDDVNQNVSATVIRQAVAAKRPIKKFVPESVEEYIKKEGLYTR
Ga0193722_11309192	3300019877	Soil	LRPRSEITKPFAKQPARGDLVLPGVTLHLLDDIHQNVSATAVRAAVAAKRPIRKFVPESVEEYIKKEGLYAK
Ga0193732_10394421	3300020012	Soil	QPFAKQPATGDLVLRGATVHLLENVHQPVSATAIRDAVAAKKPLRKFVNSAVEEYIRKEGLYG
Ga0210403_105085891	3300020580	Soil	FSLADVASALPEKFRPRAEVTKPFSKQPATGDLALPGLTLHLLDNVNKNISASAVREAVAAKRPIKKFVPESVEEYIKKEGLYTR
Ga0210403_106347123	3300020580	Soil	TKPFHKQPAHGQLVLPGVTVHLLENVHKNISATAIREAAAAKRPIGRFVTVEVVEYIKKMGLYGG
Ga0210401_111244762	3300020583	Soil	QPATGDLVLPGATVHLLDGVQQNISATAIREAVSGKRSLGKFVDAAVGEYLRKMGLYQSRGS
Ga0210406_112385531	3300021168	Soil	PFAKQPATGDLVLNGATIHLLGNVHQAVSATAIREAVVAKKPLRKFVDAAVEEYIKKEGLYLS
Ga0210405_100077391	3300021171	Soil	PFEKQPAKGDLVLNGATVHLLDGVHQAISATAIREAVSAGKSLAKFVDPAVADYIKKMELYKNGR
Ga0210397_106943791	3300021403	Soil	KQPAKGDLVLSGATVHLLDGVHQPVSATAIREAVTAKKPLRKFVDAGVEEYIRKEGLYL
Ga0210397_115139561	3300021403	Soil	QPFAKQPATGDLVLSGATIHLLENVHQPVSATAIREAVVAKKPLRKFVDASVEEYIKKEGLYLG
Ga0210389_112377681	3300021404	Soil	KGDLVLAGATVHLLEGLHQNVSSTAIRDAVAAKKPLTKFVDPAVAEYIKKEGLYRTGSR
Ga0210383_106304333	3300021407	Soil	PAKGDLVLPGATVHLLENVHQNVSATAIRDAVAAKKPLTKFVDAAVADYIKKMGLYRSK
Ga0210394_102704904	3300021420	Soil	FARQPAKGDLVLRGATLHLLDGVHHPASATAIRQAVAAQRPLGRFLDPAVADYIKKMGLYGSGR
Ga0210391_114921971	3300021433	Soil	AKQPATGDLVLPGATVHLLENVHQNISATAIRDAVAAKKPLTKLVDAAVADYIKKMGLYRSR
Ga0126371_111722371	3300021560	Tropical Forest Soil	PAKGDLVLPGVAVHLVDNLNLNISATAIREALARKRPITRWVPESVEEYIKKEGIYRPDQQPSDTE
Ga0242657_10431201	3300022722	Soil	QAAKGDLVLTGATVHLLENVHQNISATAIRDTVVAKRPLTKFVDSAVADYIKKMGLYQNK
Ga0224570_1030151	3300022730	Rhizosphere	PAKGDLVLAGATVRLLENVHQNVSATAIRDAVAAKKPLTKFVDTAVADYIKKMGLYR
Ga0207416_10535515	3300025134	Iron-Sulfur Acid Spring	PEKLRPRGEITKPFSKQPAKGDLALPGVTLHLLDNVNQNISASAVREAVAAKRPIKKFVPESVEEYIKKEGLYTR
Ga0207692_101145361	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	KQPAKGDLVLPGLALHLLDDVNQNVSATATRQAIAAKKPIRKFVPESVEEYIKKERLYGI
Ga0207692_106388602	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	KQPAKGDLVLPGVTLHLLDDVNQNISATAIRQALASKKAVKKYVPESVEEYIKKEGLYGIGRSGD
Ga0207647_100243711	3300025904	Corn Rhizosphere	PFLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS
Ga0207699_111000522	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PFAKQPAKGDLVLNGATLHLLDSVHQPVSATAIRDAVAAKKPLRKFVGAEVEEYIRKEGLYV
Ga0207659_111602432	3300025926	Miscanthus Rhizosphere	TKPFLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS
Ga0207687_102698531	3300025927	Miscanthus Rhizosphere	LRPRSEVTKPFLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS
Ga0207700_105791661	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LPGVTLHLLDDVKQNISATRIRQALAGKKPVKKYLPESVEEYIKKEGLYGIG
Ga0207690_116539821	3300025932	Corn Rhizosphere	RSEVTKPFLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS
Ga0207711_111315981	3300025941	Switchgrass Rhizosphere	DVASALPEKLRPRAEVTKPFSKQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLYG
Ga0207661_100198317	3300025944	Corn Rhizosphere	FSKQPAKGDLVLVGVTLHLLDDVNQNISATAIRQAAAAKRPIKRFVPESIEEYIRKEGLY
Ga0207667_104276853	3300025949	Corn Rhizosphere	VLPGATLHLLDGVNQNVSATAIRQALAGKKPVKKYLPESVEEYIKKEGLYGD
Ga0207639_116544032	3300026041	Corn Rhizosphere	LRPREEITKPFSKQPAKGDLALPGVTLHLLDNVNQNVSATAIRQALADKKPVRKYVPESIEEYIKKEGLYGN
Ga0207702_101745984	3300026078	Corn Rhizosphere	KGDLVLPGATLHLLDGVNQNVSATAIRQALAGKKPVKKYLPESVEEYIKKEGLYGD
Ga0209761_11224353	3300026313	Grasslands Soil	QPAKGDLVLSGVTVHLLDNVHQPVSATAIREAVAAKRPLGKFVDAAVEEYIKKMGLYSGR
Ga0209471_11229781	3300026318	Soil	NQPAKGDLVLTGATVHLLESVHYDISATKVREAVAAGKPLGKFLDPAVREYIKKTGLYRTGP
Ga0209687_12536142	3300026322	Soil	KGDLVLPGATVHLLDDVNQKVSATAIRTAVAAKKPIRKFVPESVEEYIKKEGLYFRRSS
Ga0257172_11102051	3300026482	Soil	FAKQPAKGDLVLRGATVHLLENVHQSVSATAIRDAVAAKKRLRKFVDAAVEEYIKKAGLY
Ga0209805_12143352	3300026542	Soil	SLADVAGALPEKFRPRAEVTKPFAKQPAAGDLVLPGVTLHLLDNVNQKISATEIRGAVRAKRPIKKFVPENVEEYIKKEGLYAGAAASS
Ga0209167_100265321	3300027867	Surface Soil	KPFSKQPAKGDLILPGVTLHLLDDINQKISATEIREAVRSQHPIRRLVAESVEEYIKKEGLYSR
Ga0265338_100813871	3300028800	Rhizosphere	TKPFAKQPARGDLVLSGATVHLLDGVNQAVSATTIREAVSAKKPLGKLVEPAVADYIKKMNLYSGR
Ga0170834_1071821772	3300031057	Forest Soil	GFSLADVAASLPEKLRPRAEVTKPFARQPAAGDLVLSGLTLHLLDNVNQNVSATAVRQAVAAKRPIKKFVPESVEEYIKKEGLYGG
Ga0265760_103390762	3300031090	Soil	AKGDLVLTGAIVHLLENVHQNVSATAIRDAVLAKRPLTKFVDPAVADYIKKMGLYQSVS
Ga0170818_1008671501	3300031474	Forest Soil	SLADVATALPEKLRPRSEVTKPFAKQPAKGDLVLPGVTLHLLDDINQNVSATAVRAAVAAKRPIRKFVPESVEEYIKKEGLYAK
Ga0307469_111554891	3300031720	Hardwood Forest Soil	RAEVTKPFARQPAAGDLVLAGLTLHLLDNVNQNISATAIRQAVVAKRPIRKFVPESVEEYIKKE
Ga0307475_103814163	3300031754	Hardwood Forest Soil	AEVTKPFNKQPAQGDLALPGVTLHLLDNVNQNISASAVREAVAAKRPIKKFVPESVEEYIKKEGLYTR
Ga0307473_103609842	3300031820	Hardwood Forest Soil	PESVSQPFAKQPATGDLVLNGATIHLLENVHQAISATAIREAVVAKKPLRKFVDAAVEEYIKKEGLYLG
Ga0307478_114738961	3300031823	Hardwood Forest Soil	KPFSKHPAQGDLALPGVTLHLLDNVNQNISASAVREAVAAKRPIKKFVPESVEEYIKKEGLYTR
Ga0307470_102401143	3300032174	Hardwood Forest Soil	SRPFAKQPATGDLVLNGATIHLLENVHQAISATAIREAVVAKKPMRKFVDAAVEEYIKKEGLYLG
Ga0310812_100326711	3300032421	Soil	GDLVLQGVTLHLLDDINQNISATAIRAAVATKRPIRKFVPESVEEYIKKEALYGK
Ga0310810_104832283	3300033412	Soil	DVASALPERLRPRSEVTKPFLKQPAKGDLVLSGVTLHLLDDVNQNISATAIRQALASKRPIKKFVPASVEEYIKKEGLYGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078849

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences