Metagenome / Metatranscriptome Family F078720

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078720
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	54 residues
Representative Sequence	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELDIDFFGENIEDSYHQRYPQKNGDE
Number of Associated Samples	89
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.10 %
% of genes near scaffold ends (potentially truncated)	34.48 %
% of genes from short scaffolds (< 2000 bps)	69.83 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.690 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.276 % of family members)
Environment Ontology (ENVO)	Unclassified (56.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF08534	Redoxin	33.62
PF13505	OMP_b-brl	7.76
PF10614	CsgF	6.90
PF03783	CsgG	2.59
PF01521	Fe-S_biosyn	1.72
PF04055	Radical_SAM	1.72
PF05226	CHASE2	1.72
PF13186	SPASM	0.86
PF06941	NT5C	0.86
PF07012	Curlin_rpt	0.86
PF01818	Translat_reg	0.86
PF01467	CTP_transf_like	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1462	Curli biogenesis system outer membrane secretion channel CsgG	Cell wall/membrane/envelope biogenesis [M]	2.59
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	1.72
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	1.72
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	1.72
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
All Organisms	root	All Organisms	29.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
Viruses	superkingdom	All Organisms → Viruses	24.14 %
cellular organisms	root	All Organisms → cellular organisms	5.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	24.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	24.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	24.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	21.55 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.86 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.55 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.55 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21.55 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000882\|FwDRAFT_10037252	Not Available	637	Open in IMG/M
3300002835\|B570J40625_100202035	All Organisms → cellular organisms → Bacteria → Proteobacteria	2151	Open in IMG/M
3300003490\|JGI25926J51410_1017715	Not Available	1417	Open in IMG/M
3300004096\|Ga0066177_10049226	Not Available	1486	Open in IMG/M
3300004096\|Ga0066177_10105579	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300004124\|Ga0066178_10261835	Not Available	504	Open in IMG/M
3300004126\|Ga0066179_10008505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1878	Open in IMG/M
3300004126\|Ga0066179_10153851	Not Available	623	Open in IMG/M
3300004128\|Ga0066180_10438143	Not Available	520	Open in IMG/M
3300005527\|Ga0068876_10001928	Not Available	15703	Open in IMG/M
3300005527\|Ga0068876_10019067	Not Available	4358	Open in IMG/M
3300005527\|Ga0068876_10478900	Not Available	686	Open in IMG/M
3300005528\|Ga0068872_10204227	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1126	Open in IMG/M
3300005581\|Ga0049081_10205373	Not Available	705	Open in IMG/M
3300005581\|Ga0049081_10224688	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	666	Open in IMG/M
3300006484\|Ga0070744_10010099	All Organisms → cellular organisms → Bacteria → Proteobacteria	2800	Open in IMG/M
3300006484\|Ga0070744_10024563	All Organisms → cellular organisms → Bacteria → Proteobacteria	1786	Open in IMG/M
3300007304\|Ga0102689_1493821	Not Available	662	Open in IMG/M
3300007560\|Ga0102913_1199321	Not Available	643	Open in IMG/M
3300007620\|Ga0102871_1168066	Not Available	616	Open in IMG/M
3300007625\|Ga0102870_1141434	Not Available	694	Open in IMG/M
3300007627\|Ga0102869_1019862	Not Available	1892	Open in IMG/M
3300007639\|Ga0102865_1053912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1191	Open in IMG/M
3300007649\|Ga0102912_1220095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	544	Open in IMG/M
3300007992\|Ga0105748_10211714	Not Available	808	Open in IMG/M
3300008055\|Ga0108970_10498700	Not Available	536	Open in IMG/M
3300008055\|Ga0108970_11257958	Not Available	2170	Open in IMG/M
3300008107\|Ga0114340_1029091	Not Available	3265	Open in IMG/M
3300008107\|Ga0114340_1086245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1285	Open in IMG/M
3300008108\|Ga0114341_10453670	Not Available	597	Open in IMG/M
3300008113\|Ga0114346_1112978	Not Available	1811	Open in IMG/M
3300008114\|Ga0114347_1037369	Not Available	4092	Open in IMG/M
3300008116\|Ga0114350_1129832	Not Available	741	Open in IMG/M
3300008116\|Ga0114350_1138347	Not Available	701	Open in IMG/M
3300008120\|Ga0114355_1026663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2943	Open in IMG/M
3300008120\|Ga0114355_1029865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2728	Open in IMG/M
3300008120\|Ga0114355_1099393	Not Available	1148	Open in IMG/M
3300008120\|Ga0114355_1192386	Not Available	669	Open in IMG/M
3300008259\|Ga0114841_1020684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6482	Open in IMG/M
3300008266\|Ga0114363_1004411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7384	Open in IMG/M
3300008450\|Ga0114880_1174837	Not Available	747	Open in IMG/M
3300008961\|Ga0102887_1082353	Not Available	1028	Open in IMG/M
3300009068\|Ga0114973_10045188	Not Available	2615	Open in IMG/M
3300009183\|Ga0114974_10000149	Not Available	60601	Open in IMG/M
3300009185\|Ga0114971_10307514	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	915	Open in IMG/M
3300010354\|Ga0129333_10236818	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1650	Open in IMG/M
3300010370\|Ga0129336_10300181	Not Available	893	Open in IMG/M
3300011268\|Ga0151620_1001505	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8954	Open in IMG/M
3300011268\|Ga0151620_1007571	Not Available	3950	Open in IMG/M
3300013004\|Ga0164293_10336469	Not Available	1034	Open in IMG/M
3300013005\|Ga0164292_10307342	Not Available	1083	Open in IMG/M
3300013005\|Ga0164292_10703448	Not Available	645	Open in IMG/M
3300013372\|Ga0177922_10339177	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1105	Open in IMG/M
3300017736\|Ga0181365_1154618	Not Available	542	Open in IMG/M
3300017766\|Ga0181343_1061552	Not Available	1091	Open in IMG/M
3300017774\|Ga0181358_1028019	Not Available	2214	Open in IMG/M
3300017777\|Ga0181357_1209080	Not Available	693	Open in IMG/M
3300019784\|Ga0181359_1000854	Not Available	7449	Open in IMG/M
3300019784\|Ga0181359_1004382	Not Available	4476	Open in IMG/M
3300019784\|Ga0181359_1019068	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2582	Open in IMG/M
3300019784\|Ga0181359_1058706	Not Available	1475	Open in IMG/M
3300020048\|Ga0207193_1153135	Not Available	1929	Open in IMG/M
3300020151\|Ga0211736_10080269	Not Available	1938	Open in IMG/M
3300020159\|Ga0211734_10185189	Not Available	1523	Open in IMG/M
3300020159\|Ga0211734_10991799	Not Available	717	Open in IMG/M
3300020161\|Ga0211726_10820016	Not Available	1514	Open in IMG/M
3300020162\|Ga0211735_10298030	Not Available	516	Open in IMG/M
3300020498\|Ga0208050_1010334	Not Available	1053	Open in IMG/M
3300020506\|Ga0208091_1005599	Not Available	1686	Open in IMG/M
3300020527\|Ga0208232_1008761	Not Available	1597	Open in IMG/M
3300020550\|Ga0208600_1022005	Not Available	1016	Open in IMG/M
3300020562\|Ga0208597_1009570	Not Available	2614	Open in IMG/M
3300021960\|Ga0222715_10102761	Not Available	1843	Open in IMG/M
3300021961\|Ga0222714_10029233	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4135	Open in IMG/M
3300021961\|Ga0222714_10063554	Not Available	2481	Open in IMG/M
3300021961\|Ga0222714_10402840	Not Available	722	Open in IMG/M
3300021962\|Ga0222713_10057757	Not Available	2931	Open in IMG/M
3300022190\|Ga0181354_1127140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300022190\|Ga0181354_1252940	Not Available	501	Open in IMG/M
3300023174\|Ga0214921_10008647	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13129	Open in IMG/M
3300024343\|Ga0244777_10220336	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1213	Open in IMG/M
3300024346\|Ga0244775_10014067	Not Available	7478	Open in IMG/M
3300024346\|Ga0244775_10065055	Not Available	3138	Open in IMG/M
3300027125\|Ga0255106_1020996	Not Available	956	Open in IMG/M
3300027147\|Ga0255113_1053759	Not Available	766	Open in IMG/M
3300027220\|Ga0208927_1088261	Not Available	505	Open in IMG/M
3300027287\|Ga0255135_1023045	Not Available	767	Open in IMG/M
3300027581\|Ga0209651_1115633	Not Available	747	Open in IMG/M
3300027608\|Ga0208974_1029252	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1669	Open in IMG/M
3300027608\|Ga0208974_1132052	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	646	Open in IMG/M
3300027659\|Ga0208975_1023220	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2021	Open in IMG/M
3300027659\|Ga0208975_1026798	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1861	Open in IMG/M
3300027707\|Ga0209443_1311134	Not Available	521	Open in IMG/M
3300027736\|Ga0209190_1065796	Not Available	1770	Open in IMG/M
3300027759\|Ga0209296_1000793	Not Available	26620	Open in IMG/M
3300027793\|Ga0209972_10148041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1128	Open in IMG/M
3300027816\|Ga0209990_10007147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7290	Open in IMG/M
3300027816\|Ga0209990_10030116	Not Available	2924	Open in IMG/M
3300028025\|Ga0247723_1054835	Not Available	1124	Open in IMG/M
3300031758\|Ga0315907_10008354	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10645	Open in IMG/M
3300031758\|Ga0315907_10090642	Not Available	2629	Open in IMG/M
3300031758\|Ga0315907_11250626	Not Available	516	Open in IMG/M
3300031784\|Ga0315899_10879459	Not Available	810	Open in IMG/M
3300031951\|Ga0315904_10636799	Not Available	909	Open in IMG/M
3300031963\|Ga0315901_10221742	Not Available	1620	Open in IMG/M
3300032050\|Ga0315906_10031419	Not Available	5741	Open in IMG/M
3300032092\|Ga0315905_10672530	Not Available	923	Open in IMG/M
3300033981\|Ga0334982_0201801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	982	Open in IMG/M
3300033994\|Ga0334996_0012835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5539	Open in IMG/M
3300034012\|Ga0334986_0335993	Not Available	788	Open in IMG/M
3300034022\|Ga0335005_0165161	Not Available	1397	Open in IMG/M
3300034093\|Ga0335012_0504492	Not Available	573	Open in IMG/M
3300034102\|Ga0335029_0225764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1225	Open in IMG/M
3300034104\|Ga0335031_0015255	Not Available	5640	Open in IMG/M
3300034168\|Ga0335061_0166973	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1169	Open in IMG/M
3300034279\|Ga0335052_0423510	Not Available	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.41%
Plants	Host-Associated → Plants	1.72%
Terrestrial	Environmental → Terrestrial	0.86%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.31%
Marine	Environmental → Aquatic → Marine	18.10%
Leaf	Host-Associated → Plants → Leaf	1.72%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.86%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.62%
Lake	Environmental → Aquatic → Freshwater → Lake	33.62%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.90%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.59%
River	Environmental → Aquatic → Freshwater → River	2.59%
Coastal	Environmental → Aquatic → Marine → Coastal	2.59%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.76%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.45%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.90%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.17%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.21%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	11.21%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.76%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.17%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.17%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.31%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.31%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.45%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.59%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.72%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.72%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.86%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.86%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.86%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.86%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004128	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007304	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027125	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8h	Environmental	Open in IMG/M
3300027147	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027220	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02 (SPAdes)	Environmental	Open in IMG/M
3300027287	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FwDRAFT_100372521	3300000882	Freshwater And Marine	MDNKKVVAGVAGIAVVGILSYLGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGNE*
B570J40625_1002020352	3300002835	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK*
JGI25926J51410_10177152	3300003490	Freshwater Lake	VDNKKVVAGVAGIVVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQRYPQKNNDT*
Ga0066177_100492263	3300004096	Freshwater Lake	MDNKKVIAGVAGIAVVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDNE*
Ga0066177_101055793	3300004096	Freshwater Lake	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDVDFFGENIEDSYYQKYPQKNNDT*
Ga0066178_102618352	3300004124	Freshwater Lake	MDKKKVVAGVAGIAVVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDNE*
Ga0066179_100085054	3300004126	Freshwater Lake	MDKKKVVAGVAGIAVVGILSYLGYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDNE*
Ga0066179_101538511	3300004126	Freshwater Lake	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGNE*
Ga0066180_104381431	3300004128	Freshwater Lake	VDNKKVVAGVAGIVVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQRYPQ
Ga0068876_100019283	3300005527	Freshwater Lake	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPKKNGDE*
Ga0068876_100190673	3300005527	Freshwater Lake	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEIDVNFMGENIDDDYHYRNSKNLKD*
Ga0068876_104789001	3300005527	Freshwater Lake	LSGWKRTMDNKKVVASVAGVAVVGILSYLGYRVLKELNEFHVDFMGENIDDDYHYRTHKTDGK*
Ga0068872_102042273	3300005528	Freshwater Lake	VAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPKKNGDE*
Ga0049081_102053732	3300005581	Freshwater Lentic	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEMDVNFMGENIHDDYHYRPAKNLKD*
Ga0049081_102246881	3300005581	Freshwater Lentic	MDKKKVVSGIAGVAVIGILSYLGYRVFKELEELDIDFMGENIDDDYHYRPRKNLKD*
Ga0070744_100100997	3300006484	Estuarine	MDNKKVVAGVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0070744_100245632	3300006484	Estuarine	MDNKKVIAGVAGIAIVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDDK*
Ga0102689_14938212	3300007304	Freshwater Lake	MDNKKVVASVAGVAVVGILSYLGYRVLKELNEFHVDFMGENIDDDYHYRTHKTDGK*
Ga0102913_11993212	3300007560	Estuarine	MDNKKVVAGVAGTAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0102871_11680662	3300007620	Estuarine	VGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0102870_11414341	3300007625	Estuarine	ILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0102869_10198625	3300007627	Estuarine	MDNKKIVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGNE*
Ga0102865_10539124	3300007639	Estuarine	DNKKVVAGVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0102912_12200952	3300007649	Estuarine	VAGVAGVAVVGILSYFGYRILKEISEIDVDFMGENIDDDYHYRPRKNLKD*
Ga0105748_102117141	3300007992	Estuary Water	GVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0108970_104987002	3300008055	Estuary	MDKKVVAGVAGVAVVGILSYLGYKVVKALDEVDVDFMGENIDDDYHYRTWKKDGE*
Ga0108970_112579586	3300008055	Estuary	MDNKKIVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK*
Ga0114340_10290913	3300008107	Freshwater, Plankton	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELDIDFFGENIEDSYHQRYPQKNGDE*
Ga0114340_10862451	3300008107	Freshwater, Plankton	DKKKVVSGIAGVAVIGILSYLGYRVFKELEELDIDFMGENIEDDYHYRDRKNLKD*
Ga0114341_104536701	3300008108	Freshwater, Plankton	MDNKKVVASVAGVAVVGILSYLGYRVLKELNEFHVDFMGENIDDDYHYRTRKTDGK
Ga0114346_11129782	3300008113	Freshwater, Plankton	MDNKKVVAGVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEDSYYQRYPTKNGDK*
Ga0114347_103736910	3300008114	Freshwater, Plankton	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEMDVNFMGENIHDDYHYRPAKNIKD*
Ga0114350_11298322	3300008116	Freshwater, Plankton	MDKKTVVAGVVSVAVVGILSYLGYRVLKEINEIDVNFMGENIDDDYHYRNSKNLKD
Ga0114350_11383472	3300008116	Freshwater, Plankton	MDNKKVIAGVAGVAVVGILSYLGYKVVKALDEVDVDFMGENVDDDYHFRTWKKDGE*
Ga0114355_10266638	3300008120	Freshwater, Plankton	MDKKKVVAGVAGVAVVGILSYFGYRILKEISEIDINFMGENIDDDYYCRPRKDLKD*
Ga0114355_10298652	3300008120	Freshwater, Plankton	MDNKKVIAGVAGVAVVGILSYLGYKVVKALDEVDVDFMGENVDDDYHFRTWKKDGK*
Ga0114355_10993933	3300008120	Freshwater, Plankton	MDKKKVVAGVAGVAVVGILSYFGYRILKEINEIDVNFMGENIDDDYHYRPRKNLKD*
Ga0114355_11923861	3300008120	Freshwater, Plankton	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEIDVNFMGENIDDDYHYRN
Ga0114841_10206844	3300008259	Freshwater, Plankton	MDKKTVVAGVASVAVVEINEIDVNFMGENIDDDYHYRNSKNLKD*
Ga0114363_10044115	3300008266	Freshwater, Plankton	MDNKKVVASVAGVAVVGILSYLGYRVLKELNEFHVDFMGENIDDDYHYRTRKTDGK*
Ga0114880_11748373	3300008450	Freshwater Lake	MDKKVVASVAGVAVVGILSYLGYKVVKALDEVDVDFMGENVDDDYHFRTWKKDGK*
Ga0102887_10823531	3300008961	Estuarine	MDNKKIVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEESYYQRYPQKNDNE*
Ga0114973_100451882	3300009068	Freshwater Lake	MDNKKVIAGVAGIAVVGILSYLSYRVVKEINKFDMDFFGENIEDSYYQKYPQKNNDT*
Ga0114974_1000014972	3300009183	Freshwater Lake	MDNKKIVAGVAGIAVVGILSYFGYRLVKEFNELDIDFFGENIEDSYHQRYPTKNGNE*
Ga0114971_103075143	3300009185	Freshwater Lake	NKKVVAGVAGIAVVGILSYFGYRLVKELNELDVDFFGENIEDSYYQKYPQKNNDT*
Ga0129333_102368182	3300010354	Freshwater To Marine Saline Gradient	VDNKKVVASVAGVAVVGILSYLGYRVLKELNEFHVDFKGENIDDDYHYRQPKK*
Ga0129336_103001812	3300010370	Freshwater To Marine Saline Gradient	VDNKKVVASVAGVAMVGILSYLGYRVLKELNEFHVDLKGENIDDDYHYRRPKK*
Ga0151620_100150516	3300011268	Freshwater	MDKKQVVSGIAGVAVVGILSYLGYRVFKELNELDIDFFGENIEDSYYQRYPQKNGNE*
Ga0151620_100757112	3300011268	Freshwater	MDNKKIVAGVAGIAVVGILSYFGYRLVKELNEFDIDFFGENIEDSYYQRYPTKNDDK*
Ga0164293_103364692	3300013004	Freshwater	MAMNKKTIVAGIAGVAVIGILSYLGYHVLKEINELEVDFTGENLDDEYHYRIPKK*
Ga0164292_103073424	3300013005	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTK
Ga0164292_107034482	3300013005	Freshwater	MAMNKKTIVAGIAGVAVIGILSYLGYHVLKEINELEVDFTGENLDDEYHYPIPKK*
Ga0177922_103391772	3300013372	Freshwater	MDKKKVVAGVAGVAVVGILSYFGYRILKEISEIDVDFMGENIDDDYHYRPRKNLKD*
Ga0181365_11546182	3300017736	Freshwater Lake	VDNKKVVAGVAGIVVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQR
Ga0181343_10615521	3300017766	Freshwater Lake	QMDKKKVVAGVAGVAVVGILSYFGYRILKEINEIDVNFMGENIDDDYHYRPRKNLKD
Ga0181358_10280191	3300017774	Freshwater Lake	KKVVAGVAGIVVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQRYPQKNNDT
Ga0181357_12090801	3300017777	Freshwater Lake	KMDNKKVIAGVAGIAVVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDNE
Ga0181359_100085412	3300019784	Freshwater Lake	VDNKKVVAGVAGIVVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQRYPQKNNDT
Ga0181359_10043826	3300019784	Freshwater Lake	MDKKKVVAGVAGIAVVGILSYLGYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDNE
Ga0181359_10190689	3300019784	Freshwater Lake	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDVDFFGENIEDSYYQKYPQKNNDT
Ga0181359_10587062	3300019784	Freshwater Lake	MNNKKVIAGVAGIAAVGILSYLGYRVIKELNELDMDFFGENIDDLYHYRYPRKNND
Ga0207193_11531351	3300020048	Freshwater Lake Sediment	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0211736_100802693	3300020151	Freshwater	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELEIDFFGENIEESYYQKYPKKNNDT
Ga0211734_101851894	3300020159	Freshwater	MDNKKVVAGVAGVAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPKKNGDE
Ga0211734_109917992	3300020159	Freshwater	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQRYPKKNGDE
Ga0211726_108200163	3300020161	Freshwater	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELEIDFFGENIEDSYYQRYPQKNDDK
Ga0211735_102980302	3300020162	Freshwater	MDNKKVIAGVAGIAVVGILSYLGYRVVKELNDLEIDFFGENIEESYYQRYPQKNDNE
Ga0208050_10103343	3300020498	Freshwater	MAMNKKTIVAGIAGVAVIGILSYLGYHVLKEINELEVDFTGENLDDEYHYRIPKK
Ga0208091_10055994	3300020506	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGNE
Ga0208232_10087616	3300020527	Freshwater	AGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0208600_10220053	3300020550	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKN
Ga0208597_10095701	3300020562	Freshwater	AGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0222715_101027611	3300021960	Estuarine Water	MDKKQVVSGIAGVAVVGILSYLGYRVFKELNELDIDFFGENIEDSYYQRYPQKNGNE
Ga0222714_100292332	3300021961	Estuarine Water	MDKKKVVAGVAGVAVVGILSYFGYRILKEISEIDINFMGENIDDDYHYRPRKNLKD
Ga0222714_100635542	3300021961	Estuarine Water	MDNKKVVAGVAGIAVVGILSYLGYRVVKELNELEIDFFGENIEESYYQKYPQKNNDT
Ga0222714_104028402	3300021961	Estuarine Water	MDKKKVVAGVAGVAVVGILSYFGYRILKEISKIDIDFMGENIDDDYHYRTPKK
Ga0222713_100577579	3300021962	Estuarine Water	MDKKVVAGVAGVAVVGILSYLGYKVVKALDEVDVDFMGENIDDDYHYRTWKKDGE
Ga0181354_11271402	3300022190	Freshwater Lake	MDNKKIVAGAAGVVTLGILSYLGYKVFKELNSLVLDDFMGENIDDVYHYRRPTNSSSQ
Ga0181354_12529401	3300022190	Freshwater Lake	MDNKKVIAGVAGIAVVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDNE
Ga0214921_100086478	3300023174	Freshwater	MDNKKIVAGVAGIAVVGILSYFGYRLVKELNEFDIDFFGENIEDSYHQRYPTKNGDK
Ga0244777_102203364	3300024343	Estuarine	VVAGVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE
Ga0244775_100140678	3300024346	Estuarine	MDNKKVVAGVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE
Ga0244775_1006505510	3300024346	Estuarine	MDNKKVIAGVAGIAIVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRYPQKNDDK
Ga0255106_10209962	3300027125	Freshwater	MNNKKVIAGVAGIAVVGILSYLGYRVIKELNELDMDFFGENIDDLYHYRYPRKNND
Ga0255113_10537591	3300027147	Freshwater	VAGIAAVGILSYLGYRVIKELNELDMDFFGENIDDLYHYRYPRKNND
Ga0208927_10882611	3300027220	Estuarine	LSYLGYRVVKELNELDIDFFGENIEESYYQRYPQKNDNE
Ga0255135_10230452	3300027287	Freshwater	KKVIAGVAGIAVVGILAYLGYRVIKELNELDMDFFGENIDDLYHYRYPRKNND
Ga0209651_11156332	3300027581	Freshwater Lake	MDNKKVIAGVAGIAVVGILSYLSYRVVKELNEFDIDFFGENIEDSYYQRY
Ga0208974_10292521	3300027608	Freshwater Lentic	MDKKKVVAGVAGVAVVGILSYFGYRILKEISEIDVDFMGENIDDDYHYRPRKNLKD
Ga0208974_11320522	3300027608	Freshwater Lentic	MDKKKVVSGIAGVAVIGILSYLGYRVFKELEELDIDFMGENIDDDYHYRPRKNLKD
Ga0208975_10232207	3300027659	Freshwater Lentic	MDKKKVVSGIAGVAVIGILSYLGYRVFKELEELDIDFMGENIEDDYHYRDRKNLKD
Ga0208975_10267981	3300027659	Freshwater Lentic	VVSGIAGVAVIGILSYLGYRVFKELEELDIDFMGENIDDDYHYRPRKNLKD
Ga0209443_13111342	3300027707	Freshwater Lake	MDKKKVVAGVAGIAVVGILSYLGYRVVKELNEFDIDFFGENIEDSYYQRYPQK
Ga0209190_10657964	3300027736	Freshwater Lake	MDNKKVIAGVAGIAVVGILSYLSYRVVKEINKFDMDFFGENIEDSYYQKYPQKNNDT
Ga0209296_100079313	3300027759	Freshwater Lake	MDNKKIVAGVAGIAVVGILSYFGYRLVKEFNELDIDFFGENIEDSYHQRYPTKNGNE
Ga0209972_101480411	3300027793	Freshwater Lake	GVAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPKKNGDE
Ga0209990_1000714715	3300027816	Freshwater Lake	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELDIDFFGENIEESYYQRYPKKNGDE
Ga0209990_100301163	3300027816	Freshwater Lake	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEIDVNFMGENIDDDYHYRNSKNLKD
Ga0247723_10548352	3300028025	Deep Subsurface Sediment	MDNKKIVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0315907_1000835422	3300031758	Freshwater	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEMDVNFMGENIHDDYHYRPAKNLKD
Ga0315907_100906423	3300031758	Freshwater	MDKKKVVAGVAGVAVVGILSYLGYRVVKELNELDIDFFGENIEDSYHQRYPQKNGDE
Ga0315907_112506261	3300031758	Freshwater	MDKKKVVAGVAGVAVVGILSYFGYRILKEINEIDVNFMGENIDDDYHYRPRKNLKD
Ga0315899_108794592	3300031784	Freshwater	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEMDVNFMGENIHDDYHYRPAKNL
Ga0315904_106367992	3300031951	Freshwater	MDKKTVVAGVASVAVVGILSYLGYRVLKEINEMDVNFMGENIHDDYHYRPAKNIKD
Ga0315901_102217424	3300031963	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKIG
Ga0315906_100314195	3300032050	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNVDK
Ga0315905_106725303	3300032092	Freshwater	MDKKKVVAGVAGVAVVGILSYFGYRILKEISEIDVNFMGENIEDDYHYRPRKNLKD
Ga0334982_0201801_1_138	3300033981	Freshwater	IAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0334996_0012835_5071_5241	3300033994	Freshwater	MDKKTVVAGVAGIAVVGILSYLGYRVVKELNELDIDFFGENIEDDYHSRGRKNLKD
Ga0334986_0335993_1_156	3300034012	Freshwater	VAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0335005_0165161_1251_1397	3300034022	Freshwater	MDNKKVVAGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQR
Ga0335012_0504492_421_573	3300034093	Freshwater	AGVAGIAVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGNE
Ga0335029_0225764_2_136	3300034102	Freshwater	AVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGDK
Ga0335031_0015255_1914_2084	3300034104	Freshwater	MDKKKVVAGVAGVAVVGILSYFGYRILKEISEIDVNFMGENIEDDYHYRPRKDLKD
Ga0335061_0166973_2_145	3300034168	Freshwater	AGIAVVGILSYLGYRVVKELNELELDFFGENIEESYYQKYPKKNNDT
Ga0335052_0423510_568_702	3300034279	Freshwater	AVVGILSYFGYRLVKELNELDIDFFGENIEDSYHQRYPTKNGNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078720

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences