Metagenome Family F078663

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078663
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	60 residues
Representative Sequence	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEHVEYTCTNDNATAPAWG
Number of Associated Samples	87
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.49 %
% of genes near scaffold ends (potentially truncated)	23.28 %
% of genes from short scaffolds (< 2000 bps)	63.79 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.207 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (18.103 % of family members)
Environment Ontology (ENVO)	Unclassified (48.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.379 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.57% β-sheet: 36.90% Coil/Unstructured: 59.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.43.5.1: ATP-dependent riboflavin kinase-like	d1mrza1	1mrz	0.60216
b.43.5.0: automated matches	d3bnwa1	3bnw	0.59884
d.177.1.1: FAH	d1hyoa2	1hyo	0.59751
d.177.1.0: automated matches	d6j5ya1	6j5y	0.59641
b.43.5.1: ATP-dependent riboflavin kinase-like	d1n08a_	1n08	0.59148

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01391	Collagen	1.72
PF12708	Pectate_lyase_3	1.72
PF16510	P22_portal	1.72
PF11651	P22_CoatProtein	1.72
PF08291	Peptidase_M15_3	0.86
PF16778	Phage_tail_APC	0.86
PF00959	Phage_lysozyme	0.86
PF01464	SLT	0.86
PF07120	DUF1376	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
All Organisms	root	All Organisms	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Viruses	superkingdom	All Organisms → Viruses	23.28 %
cellular organisms	root	All Organisms → cellular organisms	15.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	17.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	16.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.86 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.86 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.86 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.86 %
Methylotenera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	0.86 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
unclassified Methylotenera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera	0.86 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.86 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.86 %
unclassified Podoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae	0.86 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Bradyrhizobium sp. WSM1417	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1417	0.86 %
Methylotenera sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	0.86 %
Puniceispirillum phage HMO-2011	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	0.86 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.86 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002091\|JGI24028J26656_1004210	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2295	Open in IMG/M
3300002092\|JGI24218J26658_1018531	Not Available	976	Open in IMG/M
3300002307\|JGI24890J29729_1075030	Not Available	545	Open in IMG/M
3300002408\|B570J29032_109069751	Not Available	584	Open in IMG/M
3300002835\|B570J40625_101232420	Not Available	625	Open in IMG/M
3300003277\|JGI25908J49247_10004702	All Organisms → Viruses → Predicted Viral	4373	Open in IMG/M
3300003393\|JGI25909J50240_1029988	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300003431\|JGI25913J50563_1022386	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300004804\|Ga0007796_10085900	Not Available	986	Open in IMG/M
3300005582\|Ga0049080_10004125	All Organisms → cellular organisms → Bacteria	5068	Open in IMG/M
3300006637\|Ga0075461_10004585	All Organisms → cellular organisms → Bacteria	4557	Open in IMG/M
3300006639\|Ga0079301_1002912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	7383	Open in IMG/M
3300006641\|Ga0075471_10094740	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300006802\|Ga0070749_10512139	Not Available	653	Open in IMG/M
3300006803\|Ga0075467_10314315	Not Available	831	Open in IMG/M
3300006917\|Ga0075472_10385489	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300007636\|Ga0102856_1014025	Not Available	1137	Open in IMG/M
3300008107\|Ga0114340_1192153	Not Available	697	Open in IMG/M
3300008110\|Ga0114343_1048509	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1654	Open in IMG/M
3300008113\|Ga0114346_1064334	Not Available	1778	Open in IMG/M
3300008120\|Ga0114355_1035384	Not Available	2430	Open in IMG/M
3300008120\|Ga0114355_1138399	Not Available	885	Open in IMG/M
3300008266\|Ga0114363_1016838	All Organisms → cellular organisms → Bacteria	3290	Open in IMG/M
3300008266\|Ga0114363_1030137	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2299	Open in IMG/M
3300008266\|Ga0114363_1094762	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1085	Open in IMG/M
3300008267\|Ga0114364_1052548	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2038	Open in IMG/M
3300008448\|Ga0114876_1091598	Not Available	1234	Open in IMG/M
3300008448\|Ga0114876_1095160	Not Available	1201	Open in IMG/M
3300008459\|Ga0114865_1059591	Not Available	1454	Open in IMG/M
3300009068\|Ga0114973_10217890	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300009068\|Ga0114973_10422078	Not Available	697	Open in IMG/M
3300009151\|Ga0114962_10331711	Not Available	840	Open in IMG/M
3300009158\|Ga0114977_10106588	Not Available	1696	Open in IMG/M
3300009163\|Ga0114970_10066759	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2283	Open in IMG/M
3300009163\|Ga0114970_10182420	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
3300009182\|Ga0114959_10203283	All Organisms → Viruses → Predicted Viral	1025	Open in IMG/M
3300009183\|Ga0114974_10011824	Not Available	6314	Open in IMG/M
3300009183\|Ga0114974_10591550	Not Available	613	Open in IMG/M
3300009194\|Ga0114983_1010927	Not Available	2659	Open in IMG/M
3300009419\|Ga0114982_1049567	Not Available	1328	Open in IMG/M
3300009419\|Ga0114982_1295272	Not Available	508	Open in IMG/M
3300010158\|Ga0114960_10247521	Not Available	912	Open in IMG/M
3300010230\|Ga0136236_1000035	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20223	Open in IMG/M
3300010388\|Ga0136551_1057685	Not Available	702	Open in IMG/M
3300010885\|Ga0133913_11726450	Not Available	1571	Open in IMG/M
3300010885\|Ga0133913_13401408	Not Available	1042	Open in IMG/M
3300010885\|Ga0133913_13495917	Not Available	1025	Open in IMG/M
3300011010\|Ga0139557_1005278	Not Available	2708	Open in IMG/M
3300011184\|Ga0136709_1005643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1823	Open in IMG/M
3300011184\|Ga0136709_1013640	Not Available	1142	Open in IMG/M
3300012352\|Ga0157138_1023653	Not Available	984	Open in IMG/M
3300012933\|Ga0157211_1000040	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35356	Open in IMG/M
3300013005\|Ga0164292_10334430	Not Available	1027	Open in IMG/M
3300013372\|Ga0177922_10412055	Not Available	1229	Open in IMG/M
3300013372\|Ga0177922_10417755	All Organisms → cellular organisms → Bacteria	7333	Open in IMG/M
3300014711\|Ga0134314_100951	Not Available	2464	Open in IMG/M
3300014962\|Ga0134315_1077992	Not Available	506	Open in IMG/M
3300015050\|Ga0181338_1002863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3016	Open in IMG/M
3300017722\|Ga0181347_1015888	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2405	Open in IMG/M
3300017754\|Ga0181344_1011668	Not Available	2809	Open in IMG/M
3300017754\|Ga0181344_1067474	Not Available	1056	Open in IMG/M
3300017761\|Ga0181356_1038644	Not Available	1685	Open in IMG/M
3300017761\|Ga0181356_1038888	Not Available	1679	Open in IMG/M
3300017761\|Ga0181356_1088712	Not Available	1018	Open in IMG/M
3300017774\|Ga0181358_1091789	Not Available	1098	Open in IMG/M
3300017777\|Ga0181357_1121985	Not Available	977	Open in IMG/M
3300019781\|Ga0181360_101231	Not Available	2028	Open in IMG/M
3300019784\|Ga0181359_1003816	All Organisms → Viruses → Predicted Viral	4687	Open in IMG/M
3300019784\|Ga0181359_1004529	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4422	Open in IMG/M
3300019784\|Ga0181359_1026672	Not Available	2217	Open in IMG/M
3300019784\|Ga0181359_1120721	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	937	Open in IMG/M
3300020172\|Ga0211729_10952787	Not Available	582	Open in IMG/M
3300021519\|Ga0194048_10049407	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300022173\|Ga0181337_1043396	Not Available	590	Open in IMG/M
3300022179\|Ga0181353_1043762	Not Available	1182	Open in IMG/M
3300022407\|Ga0181351_1026082	Not Available	2482	Open in IMG/M
3300024348\|Ga0244776_10129582	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1857	Open in IMG/M
3300025091\|Ga0209616_1012845	Not Available	864	Open in IMG/M
3300025091\|Ga0209616_1026664	Not Available	586	Open in IMG/M
3300025445\|Ga0208424_1000027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21209	Open in IMG/M
3300025645\|Ga0208643_1001379	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13587	Open in IMG/M
3300027114\|Ga0208009_1001264	All Organisms → Viruses	7130	Open in IMG/M
3300027365\|Ga0209300_1045916	Not Available	763	Open in IMG/M
3300027608\|Ga0208974_1012218	Not Available	2763	Open in IMG/M
3300027733\|Ga0209297_1038051	Not Available	2217	Open in IMG/M
3300027736\|Ga0209190_1004617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8917	Open in IMG/M
3300027736\|Ga0209190_1025409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3253	Open in IMG/M
3300027749\|Ga0209084_1086767	All Organisms → Viruses → Predicted Viral	1405	Open in IMG/M
3300027759\|Ga0209296_1101117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1417	1376	Open in IMG/M
3300027759\|Ga0209296_1294533	Not Available	647	Open in IMG/M
3300028025\|Ga0247723_1002425	Not Available	9948	Open in IMG/M
3300028025\|Ga0247723_1004602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	6450	Open in IMG/M
3300028025\|Ga0247723_1073766	Not Available	913	Open in IMG/M
3300028025\|Ga0247723_1156539	Not Available	530	Open in IMG/M
3300028392\|Ga0304729_1147930	Not Available	759	Open in IMG/M
3300028393\|Ga0304728_1294089	Not Available	528	Open in IMG/M
3300031707\|Ga0315291_10405023	Not Available	1296	Open in IMG/M
3300031758\|Ga0315907_10970639	Not Available	617	Open in IMG/M
3300031772\|Ga0315288_10064871	All Organisms → cellular organisms → Bacteria → Proteobacteria	4292	Open in IMG/M
3300031784\|Ga0315899_10024215	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6430	Open in IMG/M
3300031784\|Ga0315899_10463425	Not Available	1221	Open in IMG/M
3300031787\|Ga0315900_10303900	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300031787\|Ga0315900_10874267	Not Available	608	Open in IMG/M
3300031857\|Ga0315909_10995999	Not Available	507	Open in IMG/M
3300031963\|Ga0315901_10052649	All Organisms → cellular organisms → Bacteria	3977	Open in IMG/M
3300031963\|Ga0315901_10356539	Not Available	1189	Open in IMG/M
3300031999\|Ga0315274_10332089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera → unclassified Methylotenera → Methylotenera sp.	1797	Open in IMG/M
3300032050\|Ga0315906_10181473	Not Available	2001	Open in IMG/M
3300032053\|Ga0315284_11176676	Not Available	845	Open in IMG/M
3300032093\|Ga0315902_10503822	Not Available	1052	Open in IMG/M
3300032116\|Ga0315903_10052361	All Organisms → cellular organisms → Bacteria	4147	Open in IMG/M
3300032116\|Ga0315903_10207905	Not Available	1732	Open in IMG/M
3300034060\|Ga0334983_0004214	Not Available	9992	Open in IMG/M
3300034102\|Ga0335029_0018174	All Organisms → cellular organisms → Bacteria	5377	Open in IMG/M
3300034102\|Ga0335029_0396695	Not Available	834	Open in IMG/M
3300034106\|Ga0335036_0040690	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.38%
Terrestrial	Environmental → Terrestrial	8.62%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.62%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	8.62%
Marine	Environmental → Aquatic → Marine	7.76%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	39.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.14%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	13.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	8.62%
Coastal	Environmental → Aquatic → Marine → Coastal	6.03%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.72%
Ice	Environmental → Aquatic → Freshwater → Ice	0.86%
Pond	Environmental → Aquatic → Freshwater → Pond	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	36.21%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.28%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	13.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	8.62%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.72%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.72%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	18.10%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.24%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.34%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	7.76%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.03%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	5.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.45%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.45%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	3.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.59%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.72%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.72%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	1.72%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.86%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.86%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.86%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.86%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008459	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - July 8, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010230	Filterable freshwater microbial communities from Conwy River, North Wales, UK. Not filtered control. After WGA	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011184	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012933	Freshwater microbial communities from Tributary to Mariposa, Ontario, Canada - S7	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014711	Surface water microbial communities from Bangladesh - BaraHaldiaSW0111	Environmental	Open in IMG/M
3300014962	Surface water microbial communities from Bangladesh - BaraHaldiaSW0309	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019781	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM15.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022173	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM15.D.D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025445	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027365	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24028J26656_10042102	3300002091	Lentic	MITWFAITFTDNSTGYQKMEDGNCIGVYHADGTAVSPEEHVEYTCTDMDAAAPSWA*
JGI24218J26658_10185312	3300002092	Lentic	MVTWFAIQFSDNSTGFMHLIDGNCQNVYRADGAVVSAEEHVEYTCTDMNATQPSWYVAPTPTK*
JGI24890J29729_10750301	3300002307	Lentic	MVTWFAIQFSDDSTGFMHLIDGNCQNVYRADGAVVSAEEHVEYTCTDMNATQPSWYVAPTPTK*
B570J29032_1090697512	3300002408	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRANGTSISPEEAIEYTCTNDNATAPAWYVPPVVEPTPEA*
B570J40625_1012324201	3300002835	Freshwater	SSQSLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRANGTSISPEEAIEYTCTNDNATAPAWYVPPVVEPTPEA*
JGI25908J49247_100047024	3300003277	Freshwater Lake	MITWFAIVFTDDSTGYQKMQDGNCIGVYRADGTPAGVNEDIEYTCVDDNAPAPDWA*
JGI25909J50240_10299882	3300003393	Freshwater Lake	MITWFAIVFTDDSTGYQKMQDGTCIGVYRADGALVSPEEAVEYTCVDDNATPPDWA*
JGI25913J50563_10223862	3300003431	Freshwater Lake	MITWFEITFTDNSTGYQKMEDGYTIGVYRADGTAIAPDEHVEYTCTNDNATAPTWG*
Ga0007796_100859002	3300004804	Freshwater	MITWFAITFTDNSTGYQKMEDGNCIGVYHADGTAVSPEEHVEYTCTDMDAAAPSWD*
Ga0049080_100041252	3300005582	Freshwater Lentic	MITWFEITFIDNSTGYQKMEDGYTIGVYYADGTPAGVNENIEYTCTNDNATAPTWYVAPTPEA*
Ga0075461_100045854	3300006637	Aqueous	MITWFEIAFSDGSIGYQKMQDGYTTGVYRADGFLLSPEEKVEYTCTNSNATAPTWYVEPVIEPIVENTQET*
Ga0079301_10029127	3300006639	Deep Subsurface	MTTWFEITFSDNSTGYQKMENGYCLGVYRADGTVVSPEEHVEYTCTNDNATAPAWA*
Ga0075471_100947401	3300006641	Aqueous	MITWFEITFSDGSMGYQKMEDGWTTGVYRADGTLLSPEEHVEYTCTNDNATAPAWYVEPVVTPEA*
Ga0070749_105121391	3300006802	Aqueous	MITWFEITFSDGSIGYQKMEDGWTTGVYRVDGTLLSPEEHIEYTCTNDNATAPAWA*
Ga0075467_103143152	3300006803	Aqueous	MITWFAITFIDNSTGYQKMQEGNCIGVYRADGTTVSPEEHVEYTCTDMNADAPSWA*
Ga0075472_103854892	3300006917	Aqueous	METWFAIQFADGSTGSMRLIDGNCQGVYRADGTPISPEEHVEYTCTDMNAAQPSWYVPPTE*
Ga0102856_10140252	3300007636	Estuarine	MITWFEITFTDNSTGYQKMEDGITIGVYRADGTAVSPEEAVEYTCTNDNAPAPTWG*
Ga0114340_11921531	3300008107	Freshwater, Plankton	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTTISAEEAIEYTCTNDNATAPTWG*
Ga0114343_10485092	3300008110	Freshwater, Plankton	MITWFEITFTNNSTGYQKMEDGNCIGVYYADGTPAGVNENIEYTCTNDNATAPAWYVPPVVEPTPEA*
Ga0114346_10643343	3300008113	Freshwater, Plankton	MWWSIEFSDNSAGYMKMQDGNCEGVYRADGTLISAEEHIEYTCTDMNAAKPSWAE*
Ga0114355_10353842	3300008120	Freshwater, Plankton	MITWFEITFTNNSTGYQKMEDGNCIGVYYADGTPAGVNENIEYTCTNDNATAPTWYVEPTPEA*
Ga0114355_11383992	3300008120	Freshwater, Plankton	FTNNSTGYQKMEDGNCIGVYYADGTPAGVNENIEYTCTNDNATAPAWYVPPVVEPTPEA*
Ga0114363_10168381	3300008266	Freshwater, Plankton	QVTPSSQSLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEAIEYTCTNDNATAPAWG*
Ga0114363_10301373	3300008266	Freshwater, Plankton	MITWFEITFIDNSTGYQKMEDGYTIGVYYADGTPAGVNENIEYTCTNDNATAPTWYVEPTPEA*
Ga0114363_10947623	3300008266	Freshwater, Plankton	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISAEEVIEYTCTNDNATAPTWG*
Ga0114364_10525483	3300008267	Freshwater, Plankton	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEHVEYTCTNDNATAPAWG*
Ga0114876_10915983	3300008448	Freshwater Lake	SLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTTISAEEAIEYTCTNDNATAPTWG*
Ga0114876_10951603	3300008448	Freshwater Lake	SLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISAEEVIEYTCTNDNATAPTWG*
Ga0114865_10595913	3300008459	Freshwater Lake	VQAIPSSQSLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEHVEYTCTNDNATAPAWG*
Ga0114973_102178901	3300009068	Freshwater Lake	MITWFAITFTDNSTGYQKMEDGNCLGVYRADGTAISSEEHVEYTC
Ga0114973_104220782	3300009068	Freshwater Lake	MITWFAIQFTDNSTGYQKMEDGNCIGVYRADGTAISVEEAVEYTCTDMNATAPSWA*
Ga0114962_103317112	3300009151	Freshwater Lake	MITWFAIQFSDNTTGYQKMEDGNCLGVYRADGTLIHAEEHVEYTCTDMNATAPSWA*
Ga0114977_101065883	3300009158	Freshwater Lake	MITWFAITFMDNSTGYQKMQEGICIGVYRADGTAVSPEEHVEYTCTDMNAEAPAWA*
Ga0114970_100667593	3300009163	Freshwater Lake	MITWFAIQFTDNSTGYQKMEDGNCIGVYRADGTAISAEEAVEYTCTDMNATAPSWA*
Ga0114970_101824202	3300009163	Freshwater Lake	MITWFAITFTDNSTGYQKMEDGNCLGVYRADGTAISSEEHVEYTCTDMNATAPSWA*
Ga0114959_102032832	3300009182	Freshwater Lake	MITWFAITFTDNSTGYQKMEDGNCLGVYRADGTLIHAEEHVEYTCTDMNATAPSWA*
Ga0114974_100118242	3300009183	Freshwater Lake	MITWFEITFSDGSMGYQKMEDGWTTGVYRADGTLLSPEEHVEYTCTNDNATAPAWYVEPTPEA*
Ga0114974_105915502	3300009183	Freshwater Lake	MITWFEITFSDNSTGYQKMEDGYCTGVYRADGTAIAPDEHVEYTCTNDNATAPSWG*
Ga0114983_10109273	3300009194	Deep Subsurface	MITWFEITFKDNSTGYQKMQDGYCIGVYYADGTEAGLTENIEYTCTNDNATAPDWA*
Ga0114982_10495673	3300009419	Deep Subsurface	MITWFEITFSDNSTGYQKMEDGNTIGVYRADGTAIAPDEHVEYTCTNDNATAPTWG*
Ga0114982_12952722	3300009419	Deep Subsurface	MITWFEITFTDNSTGYQKMEDGYCIGVYRADGTAISPEEKVEYTCTNDNATAPSWYVAPTPEA*
Ga0114960_102475211	3300010158	Freshwater Lake	MIIWFAIVFNDDSTGYQKMQDGNCIGVYRSDGTLIGIGEKVEYTCVDANAPKPSWAE*
Ga0136236_100003526	3300010230	Freshwater	MITWFAIQFTDNSTGYQKMEDGNCIGVYRADGTVISSEEAVEYTCTDMNATAPSWA*
Ga0136551_10576853	3300010388	Pond Fresh Water	MITWFEITFSDNSMGYQKMEDGWTTGVYRADGTLLSPEEHVEYTCTNDNAT
Ga0133913_117264503	3300010885	Freshwater Lake	MITWFAITFTDNSTGYQKMQDGYCLGVYRADGALVSPEEHVEYTCTDMNAEAPSWA*
Ga0133913_134014083	3300010885	Freshwater Lake	MITWFAITFTDNSTGYQKMEDGNCIGVYRADGTAISPEEHVEYICTDMNATAPSWA*
Ga0133913_134959171	3300010885	Freshwater Lake	LLLEITKMITWFAITFTDNSTGYQKMEDGNCIGVYRADGTVISAEEAVEYTCTDMNATAPSWA*
Ga0139557_10052784	3300011010	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEAIEYTCTNDNATAPAWG*
Ga0136709_10056434	3300011184	Freshwater	MITWFEITFSDNSTGYQKMEDGNCIGVYRADGTVVSPEEAVEYTCTNDNATAPSWA*
Ga0136709_10136403	3300011184	Freshwater	MITWFAIQFADNSTGYQKMEDGNCIGVYRADGAAVSPEEVVEYTCTDMNATAPTWG*
Ga0157138_10236532	3300012352	Freshwater	MITWFEITFSDGSMGYQKMEDGWTTGVYRADGTLLSPEDKVEYTCTNDNATAPAWA*
Ga0157211_10000405	3300012933	Freshwater	METWFAIQFIDGSTGSMRLIDGWCQGVYRADGTVVSPEEAVEYTCTNMDVAQPSWYVPPTE*
Ga0164292_103344302	3300013005	Freshwater	MITWFEITFSDNSTGYQKMEDGWTTGVYRADGAVVSAEEAVEYTCTNDNATAPAWYVEPVVVPVVETTPEA*
Ga0177922_104120552	3300013372	Freshwater	MITWFEITFKDNSTGYQKMQDGYCIGVYCADGSIAGLTKNLEYTCTNDNATAPAWA*
Ga0177922_104177551	3300013372	Freshwater	PSSQSLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEAIEYTCTNDNATAPAWG*
Ga0134314_1009512	3300014711	Surface Water	MITWFEITFSDGSMGYQKMEDGWATGVYRADGTLISPEEHIEYTCTNDNATAPAWG*
Ga0134315_10779921	3300014962	Surface Water	METWFAIQFSDNSTGFMHLIDGNCQNVYRADGTVVSVEEKVEYTCTDMNAAQPSWYTAA*
Ga0181338_10028635	3300015050	Freshwater Lake	VVPVLVIPSSQLLEITKMITWFAIVFTDDSTGYQKMEDGHCIGVYCADGTPAGVNENIEYTCVNNNATAPDWA*
Ga0181347_10158883	3300017722	Freshwater Lake	MITWFAIVFIDNSTGYQKMVDGNTVGVYRADGTVISSEEAVEYTCINNNAPAPDWA
Ga0181344_10116684	3300017754	Freshwater Lake	MITWFEITFLDNSTGYQKMEDGWTTGVYRADGAVVSAEEHVEYTCTNDNATAPAWYVEPTPEA
Ga0181344_10674743	3300017754	Freshwater Lake	GYQKMEDGWTTGVYRADGAVVSVEEHVEYTCTNDNATAPAWYVPPVIEPVIEPVIEPTPE
Ga0181356_10386443	3300017761	Freshwater Lake	IDNSTGYQKMVDGNTVGVYRADGTVISSEEAVEYTCVDDIVPAPDWA
Ga0181356_10388883	3300017761	Freshwater Lake	VVLVLVILSSQLLEITKMITWFAIVFTDDSTGYQKMQDGTCIGVYRADGALVSPEEAVEYTCVDDNATPPDWA
Ga0181356_10887122	3300017761	Freshwater Lake	MITWFAIVFTDNSTGYQKMQDGNCIGVYRADGTPAGVNEDIEYTCVDDNAPAPDWA
Ga0181358_10917892	3300017774	Freshwater Lake	MITWFEITFLDNSTGYQKMEDGNTIGVYRADGTVVSAEEHVEYTCTNDNATAPTWYVEPVVETTPEA
Ga0181357_11219852	3300017777	Freshwater Lake	MITWFEITFTDNSAGYQKMEDGNTIGVYRADGTVISAEEAVEYTCTNDNATAPTWYVEPVVETTPEA
Ga0181360_1012312	3300019781	Freshwater Lake	MITWFAIVFTDDSTGYQKMQDGTCIGVYRADGALVSPEEAVEYTCVDDNATPPDWA
Ga0181359_10038163	3300019784	Freshwater Lake	MITWFAIVFTDDSTGYQKMQDGNCIGVYRADGTPAGVNEDIEYTCVDDNAPAPDWA
Ga0181359_10045295	3300019784	Freshwater Lake	DNSTGYQKMEDGYTIGVYRADGTAIAPDEHVEYTCTNDNATAPTWG
Ga0181359_10266724	3300019784	Freshwater Lake	MITWFAIVFTDDSTGYQKMEDGHCIGVYCADGTPAGVNENIEYTCVNNNATAPDWA
Ga0181359_11207213	3300019784	Freshwater Lake	MITWFAIVFIDNSTGYQKMVDGNTVGVYRADGTVISSEEAVEYTCINDNAPAPDWA
Ga0211729_109527871	3300020172	Freshwater	MITWFEITFSDNSTGYQKMEDGWATGVYRADGAVVSVEEHVEYTCTNDNATAPAWYVEPTPEA
Ga0194048_100494074	3300021519	Anoxic Zone Freshwater	MITWFAITFTDNSTGYQKMEDGNCIGVYRADGTVISSEEHVEYTCTDMNATAPSWA
Ga0181337_10433961	3300022173	Freshwater Lake	MITWFAIVFTDDSTGYQKMQDGTCIGVYRADGALVSPEEAVEYTCVDDNATPPD
Ga0181353_10437623	3300022179	Freshwater Lake	MITWFEITFTDNSTGYQKMEDGYTIGVYRADGTAIAPDEHVEYTCTNDNATAPTWG
Ga0181351_10260823	3300022407	Freshwater Lake	LVIPSSQLLEITKMITWFAIVFTDDSTGYQKMEDGHCIGVYCADGTPAGVNENIEYTCVNNNATAPDWA
Ga0244776_101295822	3300024348	Estuarine	MITWFEITFTDNSTGYQKMEDGITIGVYRADGTAVSPEEAVEYTCTNDNAPAPTWG
Ga0209616_10128452	3300025091	Freshwater	MITWFAIQFADNSTGYQKMEDGNCIGVYRADGAAVSPEEVVEYTCTDMNATAPTWG
Ga0209616_10266641	3300025091	Freshwater	RLLMITWFEITFSDGSTGYQKMEDGNCIGVYRADGTVVSPEEAVEYTCTNDNATAPSWA
Ga0208424_100002721	3300025445	Aqueous	MITWFEIAFSDGSIGYQKMQDGYTTGVYRADGFLLSPEEKVEYTCTNSNATAPTWYVEPVIEPIVENTQET
Ga0208643_10013799	3300025645	Aqueous	MITWFAITFIDNSTGYQKMQEGNCIGVYRADGTTVSPEEHVEYTCTDMNADAPSWA
Ga0208009_10012647	3300027114	Deep Subsurface	MTTWFEITFSDNSTGYQKMENGYCLGVYRADGTVVSPEEHVEYTCTNDNATAPAWA
Ga0209300_10459162	3300027365	Deep Subsurface	MITWFEITFKDNSTGYQKMQDGYCIGVYYADGTEAGLTENIEYTCTNDNATAPDWA
Ga0208974_10122181	3300027608	Freshwater Lentic	SSQLLEITKMITWFEITFIDNSTGYQKMEDGYTIGVYYADGTPAGVNENIEYTCTNDNATAPTWYVAPTPEA
Ga0209297_10380512	3300027733	Freshwater Lake	MITWFAITFMDNSTGYQKMQEGICIGVYRADGTAVSPEEHVEYTCTDMNAEAPAWA
Ga0209190_100461714	3300027736	Freshwater Lake	MITWFAIQFTDNSTGYQKMEDGNCIGVYRADGTAISVEEAVEYTCTDMNATAPSWA
Ga0209190_10254095	3300027736	Freshwater Lake	MITWFAIQFTDNSTGYQKMEDGNCIGVYRADGTAISAEEAVEYTCTDMNATAPSWA
Ga0209084_10867673	3300027749	Freshwater Lake	MITWFAIQFSDNTTGYQKMEDGNCLGVYRADGTLIHAEEHVEYTCTDMNATAPSWA
Ga0209296_11011172	3300027759	Freshwater Lake	MITWFEITFSDGSMGYQKMEDGWTTGVYRADGTLLSPEEHVEYTCTNDNATAPAWYVEPTPEA
Ga0209296_12945332	3300027759	Freshwater Lake	MITWFEITFSDNSTGYQKMEDGYCTGVYRADGTAIAPDEHVEYTCTNDNATAPSWG
Ga0247723_10024257	3300028025	Deep Subsurface Sediment	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTVIAPDEHVEYTCTNDNATAPTWG
Ga0247723_10046026	3300028025	Deep Subsurface Sediment	MITWFEITFSDNSAGYQKMEDGYTIGVYRANGTAISPEEHVEYTCTNDNATAPAWYVEPVVTPEA
Ga0247723_10737661	3300028025	Deep Subsurface Sediment	MITWFAIQFADNSTGYQKMEDGYCIGVYRADGTAVSPEEAIEYTCTNDNATAPTWG
Ga0247723_11565392	3300028025	Deep Subsurface Sediment	MITWFEITFTDNSTGYQKMEDGYCIGVYRADGTAISPEEKVEYTCTNDNATAPSWYVAPTPEA
Ga0304729_11479301	3300028392	Freshwater Lake	RLLNRNNCWRLLMITWFAIQFSDNTTGYQKMEDGNCLGVYRADGTLIHAEEHVEYTCTDMNATAPSWA
Ga0304728_12940891	3300028393	Freshwater Lake	IWFAIVFNDDSTGYQKMQDGNCIGVYRSDGTLIGIGEKVEYTCVDANAPKPSWAE
Ga0315291_104050232	3300031707	Sediment	MITWFEITFTDNSTGYQKMEDGNTIGIYRADGAVISPEEAIEYTCTNDNATAPTWG
Ga0315907_109706392	3300031758	Freshwater	MITWFEITFIDNSTGYQKMEDGYTIGVYYADGTPAGVNENIEYTCTNDNATAPTWYVEPTPEA
Ga0315288_100648718	3300031772	Sediment	MITWFAIVFTDDSTGYQKMDSGHCIGVYRSDGTLISPEEKVEYTCVNDNATAPDWA
Ga0315899_100242155	3300031784	Freshwater	MITWFEITFTNNSTGYQKMEDGNCIGVYYADGTPAGVNENIEYTCTNDNATAPAWYVPPVVEPTPEA
Ga0315899_104634251	3300031784	Freshwater	ITWFEITFTDNSTGYQKMEDGYCIGVYRADGTTISAEEAIEYTCTNDNATAPTWG
Ga0315900_103039003	3300031787	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTTISAEEAIEYTCTNDNAT
Ga0315900_108742672	3300031787	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEAIEYTCTNDNATAPAWG
Ga0315909_109959991	3300031857	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTTISAEEAIEYTCTNDNATAPTWG
Ga0315901_100526491	3300031963	Freshwater	LAHLLALLVQAIPSSQSLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEAIEYTCTNDNATAPAWG
Ga0315901_103565393	3300031963	Freshwater	LLEHQLVHHHLATLSSQLLEITKMITWFEITFIDNSTGYQKMEDGYTIGVYYADGTPAGVNENIEYTCTNDNATAPAWYVPPVVEPTPEA
Ga0315274_103320893	3300031999	Sediment	MITWFEITFKDNSIGYQKMEDGNTIGVYRADGTVISPEEAIEYTCTNDNATAPTWG
Ga0315906_101814734	3300032050	Freshwater	HHHLATLSSQLLEITKMITWFEITFTNNSTGYQKMEDGNCIGVYYADGTPAGVNENIEYTCTNDNATAPAWYVPPVVEPTPEA
Ga0315284_111766763	3300032053	Sediment	MITWFALVFTDDSTGYQKMDSGHCIGVYRSDGTLISPEEKVEYTCVNDNATAPDWA
Ga0315902_105038221	3300032093	Freshwater	CMQLLEHQLEHHHLATLSSQLLEITKMITWFEITFTNNSTGYQKMEDGNCIGVYYADGTPAGVNENIEYTCTNDNATAPAWYVPPVVEPTPEA
Ga0315903_100523614	3300032116	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISAEEAIEYTCTNDNATAPTWG
Ga0315903_102079051	3300032116	Freshwater	LLVQVTPSSQSLEITKMITWFEITFTDNSTGYQKMEDGNTIGVYRADGTAISPEEAIEYTCTNDNATAPAWG
Ga0334983_0004214_5497_5667	3300034060	Freshwater	MITWFEITFLDNSTGYQKMEDGNCIGVYRADGTAVSPEEAVEYTCTNDNAPAPTWG
Ga0335029_0018174_2512_2715	3300034102	Freshwater	MITWFEITFSDNSTGYQKMEDGNTIGVYRADGTAISAEEVVEYTCTNDNATAPAWYVPPVVEPTPEA
Ga0335029_0396695_501_671	3300034102	Freshwater	MITWFEITFTDNSTGYQKMEEGYTIGVYRADGTAISPEEAVEYTCTNDNALAPTWG
Ga0335036_0040690_1220_1423	3300034106	Freshwater	MITWFEITFTDNSTGYQKMEDGNTIGVYRANGTSISPEEAIEYTCTNDNATAPAWYVPPVVEPTPEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078663

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences