Metagenome Family F078496

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078496
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	56 residues
Representative Sequence	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLA
Number of Associated Samples	94
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.69 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (95.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (38.793 % of family members)
Environment Ontology (ENVO)	Unclassified (68.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1JGI25381J37097_10358341 2JGI25385J37094_100333821 3JGI25385J37094_101906122 4JGI25383J37093_101049992 5JGI25384J37096_102587081 6JGI25382J43887_103454861 7Ga0062594_1033242041 8Ga0066674_104947791 9Ga0066672_105204411 10Ga0066679_108239101 11Ga0066684_102487251 12Ga0066676_105375941 13Ga0070705_1016499721 14Ga0070708_1004101821 15Ga0070708_1004944861 16Ga0066689_105779242 17Ga0066689_109940341 18Ga0066689_110010252 19Ga0066692_100686231 20Ga0066707_103479333 21Ga0066707_108053851 22Ga0066704_108230052 23Ga0066699_111292821 24Ga0066705_100430901 25Ga0066694_100797043 26Ga0066702_100971301 27Ga0066691_102376063 28Ga0066691_103493022 29Ga0066654_103869002 30Ga0066696_109246401 31Ga0066658_103755411 32Ga0079221_102185823 33Ga0079221_114396441 34Ga0066710_1041857742 35Ga0099829_106796591 36Ga0099830_108257271 37Ga0134070_102223402 38Ga0134082_101307613 39Ga0134088_101320533 40Ga0134088_103137672 41Ga0134067_101552231 42Ga0134071_106020492 43Ga0134066_100188013 44Ga0134126_115612232 45Ga0137388_113439431 46Ga0137383_112524361 47Ga0137382_107574002 48Ga0137379_113810661 49Ga0137378_100687895 50Ga0137378_107332573 51Ga0137370_100834934 52Ga0137366_111355532 53Ga0137371_100762756 54Ga0137375_101138973 55Ga0137360_109632111 56Ga0137398_111978392 57Ga0137396_105345581 58Ga0137419_103619061 59Ga0137404_104091883 60Ga0137407_113482241 61Ga0134077_101250181 62Ga0134110_100863473 63Ga0134081_101631981 64Ga0134075_100696801 65Ga0137420_12185261 66Ga0134072_104864431 67Ga0134112_100065091 68Ga0134112_101088671 69Ga0134112_102399201 70Ga0134083_102385901 71Ga0066655_107834551 72Ga0066655_110349781 73Ga0066655_112067982 74Ga0066662_101064404 75Ga0066662_106241871 76Ga0066669_111004811 77Ga0179596_107237321 78Ga0209234_12332941 79Ga0209235_11556571 80Ga0209237_10224056 81Ga0209237_10580981 82Ga0209238_100079113 83Ga0209238_10204224 84Ga0209688_10507712 85Ga0209468_10452651 86Ga0209468_11875491 87Ga0209469_10705361 88Ga0209265_11856602 89Ga0209055_11828631 90Ga0209153_10418643 91Ga0209155_10347531 92Ga0209154_10704743 93Ga0209152_103562192 94Ga0209801_10718813 95Ga0209266_12671911 96Ga0209802_10590651 97Ga0209267_13322372 98Ga0209804_10784543 99Ga0209159_11262811 100Ga0209059_10746291 101Ga0209059_11656371 102Ga0209157_12590502 103Ga0209056_100527672 104Ga0209056_106416091 105Ga0209161_103832471 106Ga0209161_105090511 107Ga0209474_102275291 108Ga0209076_10611991 109Ga0209689_14210362 110Ga0307504_100443023 111Ga0307296_103140651 112Ga0307501_100409431 113Ga0307501_100817412 114Ga0307469_109074951 115Ga0307469_109859881 116Ga0307468_1010873221
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1JGI25381J37097_10358341 2JGI25385J37094_100333821 3JGI25384J37096_102587081 4Ga0066684_102487251 5Ga0066694_100797043 6Ga0066654_103869002 7Ga0079221_102185823 8Ga0079221_114396441 9Ga0066710_1041857742 10Ga0134088_101320533 11Ga0134088_103137672 12Ga0134067_101552231 13Ga0137366_111355532 14Ga0137375_101138973 15Ga0134075_100696801 16Ga0307501_100409431
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 1Ga0066672_105204411 2JGI25381J37097_10358341 3JGI25384J37096_102587081 4Ga0066654_103869002 5Ga0079221_102185823 6Ga0066710_1041857742 7Ga0099830_108257271 8Ga0137371_100762756 9Ga0137375_101138973 10Ga0134075_100696801 11Ga0134112_100065091 12Ga0134112_102399201 13Ga0066655_112067982 14Ga0209802_10590651 15Ga0209267_13322372 16Ga0307501_100409431 17Ga0307468_1010873221
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.20% β-sheet: 0.00% Coil/Unstructured: 37.80%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF16264	SatD	34.48
PF14681	UPRTase	21.55
PF13671	AAA_33	0.86
PF13620	CarboxypepD_reg	0.86
PF13641	Glyco_tranf_2_3	0.86
PF10531	SLBB	0.86
PF07908	Obsolete Pfam Family	0.86
PF13646	HEAT_2	0.86
PF07969	Amidohydro_3	0.86

Showing 1 to 9 of 9 entries

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.03 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6.03 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.31 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	6.03 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.03 %
Unclassified	root	N/A	4.31 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1035834	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300002558\|JGI25385J37094_10033382	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300002558\|JGI25385J37094_10190612	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300002560\|JGI25383J37093_10104999	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300002561\|JGI25384J37096_10258708	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300002908\|JGI25382J43887_10345486	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005093\|Ga0062594_103324204	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005166\|Ga0066674_10494779	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005167\|Ga0066672_10520441	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005176\|Ga0066679_10823910	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M

Showing 1 to 10 of 112 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	3.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.55%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	55.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.21%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	38.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.10%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M

Showing 1 to 10 of 94 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10358341	3300002557	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVIAALVAGTLLEPLATPSHAGLWWGRA
JGI25385J37094_100333821	3300002558	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGKLLAP
JGI25385J37094_101906122	3300002558	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTL
JGI25383J37093_101049992	3300002560	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALV
JGI25384J37096_102587081	3300002561	Grasslands Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASLLLVEAAVVIVALTVGTFLAPLVVPRAQGLFWGRIG
JGI25382J43887_103454861	3300002908	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLL
Ga0062594_1033242041	3300005093	Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLWWG
Ga0066674_104947791	3300005166	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLARPSA
Ga0066672_105204411	3300005167	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLA
Ga0066679_108239101	3300005176	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRAGTLLVVEALFLIGALVAGTLLAPLATPSHAGLWWGRAALL
Ga0066684_102487251	3300005179	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSP
Ga0066676_105375941	3300005186	Soil	VNPLFVVPLLVYTLAASLWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVPVAKGLLWGRVGLLATGYLY
Ga0070705_1016499721	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGT
Ga0070708_1004101821	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLARPSADG
Ga0070708_1004944861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNPLYVVPLLVYTLAATLWPSQVDGRRRARTLLLVEAVVVIAALVVGTLLARLATPSTTGLWWGR
Ga0066689_105779242	3300005447	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTFLAPLARPSAAGLWWG
Ga0066689_109940341	3300005447	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPS
Ga0066689_110010252	3300005447	Soil	VNPLFVVPLLVYTLAASLWPGQVDGRRRGATVLIVEAVVVAVALAVGTFLAPLVVPRAQGLFWGRVGLLAT
Ga0066692_100686231	3300005555	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRAGTLLVVEALFLIAALVAGTLLAPLVTPI
Ga0066707_103479333	3300005556	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVP
Ga0066707_108053851	3300005556	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSA
Ga0066704_108230052	3300005557	Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAILVVVALAVGTFLAPLVVPRAQGLFWGRVGLLATGYLY
Ga0066699_111292821	3300005561	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLAPLARPSVAGLWWGRV
Ga0066705_100430901	3300005569	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLAPLARPSVDGLWWG
Ga0066694_100797043	3300005574	Soil	MNPLFVVPLLAYTLAATLWPAQVDGHRRAATLLLWEAVFVIIALV
Ga0066702_100971301	3300005575	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGKLLAPLARPSADGLWWGRVGL
Ga0066691_102376063	3300005586	Soil	VNPLYVVPLLAYTLAATLWPSQVDGRRRARTLLLVEAVVVIAAL
Ga0066691_103493022	3300005586	Soil	VNPLFVVPLLAYTLAATLWPDQVDGRRRARTLLVVEALLVVAALV
Ga0066654_103869002	3300005587	Soil	VNPLFPVPLLAYTLAATFWPHQVDGQRRGRVLLLVEAGILIATLVAGTYL
Ga0066696_109246401	3300006032	Soil	VNPLFPVPLLAYTLAATFWPHQVDGHRRGRVLLLVEAGILIATLVAG
Ga0066658_103755411	3300006794	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRASTLLVVEALLVIAALVAGTLLAPHAT
Ga0079221_102185823	3300006804	Agricultural Soil	VNPLYVVPLLAYTLAATLWPTQVDGRRRARTLLMVEAVLIIAALVVGRLLAPLATPSA
Ga0079221_114396441	3300006804	Agricultural Soil	VNPLYVVPLLAYTLAATLWPSQVDGRRRARTLLLVEAVI
Ga0066710_1041857742	3300009012	Grasslands Soil	MNPLFVVPLVTYTLVATLLPAQVDGRRRGGVLLASALWIVIVALVA
Ga0099829_106796591	3300009038	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELL
Ga0099830_108257271	3300009088	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPDQVDGRRRARALLFGEALFVTGALVVGKLLEPLVHALP
Ga0134070_102223402	3300010301	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRARTLLFGETLFVIAALVLGTLLAPLARPSVDGLWWG
Ga0134082_101307613	3300010303	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLLVEALFVVAALVVG
Ga0134088_101320533	3300010304	Grasslands Soil	VNPLSVVPLLVYTLAATLWPTQVDSRRRGASLLLVEAVIVAAAVVAGGYLAELVVPR
Ga0134088_103137672	3300010304	Grasslands Soil	VNPLYVVPLLVYTLAATLWPAQVDGRRRARTLLIVEGVLVIAALVAGTL
Ga0134067_101552231	3300010321	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLDPLARPSVDGLWWGRVAFRH
Ga0134071_106020492	3300010336	Grasslands Soil	VNPLFVVPLLAYTLAATLWPSQVDGHRGGRALLFGEVLFVIAALVLGT
Ga0134066_100188013	3300010364	Grasslands Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALFVIAALVAGTLL
Ga0134126_115612232	3300010396	Terrestrial Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLAR
Ga0137388_113439431	3300012189	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLW
Ga0137383_112524361	3300012199	Vadose Zone Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSPLVVPRAQGLFWGR
Ga0137382_107574002	3300012200	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAP
Ga0137379_113810661	3300012209	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLV
Ga0137378_100687895	3300012210	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWG
Ga0137378_107332573	3300012210	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVIA
Ga0137370_100834934	3300012285	Vadose Zone Soil	VNPLFVVPLLAYALAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLAR
Ga0137366_111355532	3300012354	Vadose Zone Soil	VNPLYVVPLLAYTLAATLWPAQVDGRRRARTLLLVEAVVVIAALVAGTFLAWRAEPGTCRRRG
Ga0137371_100762756	3300012356	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRGSTLLFGEAVWVIVALV
Ga0137375_101138973	3300012360	Vadose Zone Soil	VNPLFVVPLLAYTLVAALWPAQVDGHRRGAPVLVVEALIVIAALA
Ga0137360_109632111	3300012361	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWGRVGLL
Ga0137398_111978392	3300012683	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLA
Ga0137396_105345581	3300012918	Vadose Zone Soil	VNPLFVVPLLAYALAATLWPAQVDGRRRGRALLFGEASFVIAALVLGKL
Ga0137419_103619061	3300012925	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTL
Ga0137404_104091883	3300012929	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLWWGRVA
Ga0137407_113482241	3300012930	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAAL
Ga0134077_101250181	3300012972	Grasslands Soil	VNPLFVVPLLAYTLAATLWPSQVDGRRGGRALLFGEVLFVIAALVLGTLLAPLARPS
Ga0134110_100863473	3300012975	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVVAALVVGTLLAPLATPNHAELSWGR
Ga0134081_101631981	3300014150	Grasslands Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALFVIAAL
Ga0134075_100696801	3300014154	Grasslands Soil	VNPLYVVPLLAYTLAATLWPTQVDGRRRATTLLMSEAGVLIVALVAGIFF
Ga0137420_12185261	3300015054	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLARPSA
Ga0134072_104864431	3300015357	Grasslands Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVPVAKGLLWGRV
Ga0134112_100065091	3300017656	Grasslands Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAVLVVVALAVGTFLAPLVVPRAQGLFWGRVGLL
Ga0134112_101088671	3300017656	Grasslands Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASVLLVEAAVVIVALTIGTFLAPLVVPV
Ga0134112_102399201	3300017656	Grasslands Soil	VNPLYVVPLLVYTLAATLWPAQVDGRRRARTLLIVEGVLVIAALVAGTLLARLATPSAQG
Ga0134083_102385901	3300017659	Grasslands Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALF
Ga0066655_107834551	3300018431	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLARPSAA
Ga0066655_110349781	3300018431	Grasslands Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLARPSAA
Ga0066655_112067982	3300018431	Grasslands Soil	VNPLSVVPLLVYTLAATLWPTQVDSRRRGASLLLVEAVIVAAAVVAGGYLAELVVPRSQGLWWG
Ga0066662_101064404	3300018468	Grasslands Soil	VNPLYVVPLLVYTLAATLWPAQVDGRRRARTLLIVEGVLVIAALVA
Ga0066662_106241871	3300018468	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRAGTLLVVEALFLIAALVAGTLLAPLVTPIRAGLWWGR
Ga0066669_111004811	3300018482	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSAD
Ga0179596_107237321	3300021086	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLA
Ga0209234_12332941	3300026295	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLA
Ga0209235_11556571	3300026296	Grasslands Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAVLVVVALAVGTFLAPLVVPRAQGLFWGRVGLLAT
Ga0209237_10224056	3300026297	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWGR
Ga0209237_10580981	3300026297	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEVLFVIAALVLGM
Ga0209238_100079113	3300026301	Grasslands Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAILVVVALAVGTFLAPLVVPRAQGLFW
Ga0209238_10204224	3300026301	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVIAALVAGT
Ga0209688_10507712	3300026305	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGAPLLLVEAAVVIVALTVGTFLSPLVVPR
Ga0209468_10452651	3300026306	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWGRV
Ga0209468_11875491	3300026306	Soil	VNPLSVVPLLVYTLAATLWPAQVDTRRRGASLLFVEAVIVAAAVGAGGYLAQ
Ga0209469_10705361	3300026307	Soil	VNPLFVVPLLAYALAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSV
Ga0209265_11856602	3300026308	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASQLLVEAAVVIVALTVGTFLAPLVVPRA
Ga0209055_11828631	3300026309	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRASTLLVVEALLVIAALVAGTLLAPLATPSHAG
Ga0209153_10418643	3300026312	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVVAALVVGTLLAPLATPNHAGLWWGRAAL
Ga0209155_10347531	3300026316	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASLLLVEAAVVIVALTVGTFLAPLVV
Ga0209154_10704743	3300026317	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSPL
Ga0209152_103562192	3300026325	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALA
Ga0209801_10718813	3300026326	Soil	VNPLFVVPLLAYALAGTLWPGQVDGRRRGRALLFGEALIVIAALVLGTLLAPLARPSVDG
Ga0209266_12671911	3300026327	Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALFVIAALV
Ga0209802_10590651	3300026328	Soil	MNPLFVVPLLAYTLAATLWPAQVDGHRRAATLLLWEAVFVIIALVAGTYFARLAK
Ga0209267_13322372	3300026331	Soil	VNPLSVVPLLAYTLAATLWPAQVDGRRRGRALLFGEALFVIAAATVHL
Ga0209804_10784543	3300026335	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVPVAKG
Ga0209159_11262811	3300026343	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTFLAPLARPSAAGLWWGRVALLA
Ga0209059_10746291	3300026527	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASLLLVEAAVVIVALTVGTFLAPLVVPRAQGLF
Ga0209059_11656371	3300026527	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASVLLVEVAIVIVALTIGTFLAPLAV
Ga0209157_12590502	3300026537	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLAR
Ga0209056_100527672	3300026538	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLAPLARPSVAGLWTAPPERSMSPAAAR
Ga0209056_106416091	3300026538	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASVLLVEAAVVIVALTIGT
Ga0209161_103832471	3300026548	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSPLV
Ga0209161_105090511	3300026548	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEVLFVIAALVLGTLLAPLARPSADGLWWGRVG
Ga0209474_102275291	3300026550	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGT
Ga0209076_10611991	3300027643	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLARPSADGLWWG
Ga0209689_14210362	3300027748	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLG
Ga0307504_100443023	3300028792	Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLWW
Ga0307296_103140651	3300028819	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVGEALILIAALIAG
Ga0307501_100409431	3300031152	Soil	VNPLFVVPLLAYTLAAALWPAQVDGRRRARTLLVGEALILIAALIAGTYLARLARPS
Ga0307501_100817412	3300031152	Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRARTLLFGEVLFVIAALVLGTLL
Ga0307469_109074951	3300031720	Hardwood Forest Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGETLFVIAALVLGML
Ga0307469_109859881	3300031720	Hardwood Forest Soil	VNPLSVVPLLVYTLGATLWPAQVDGRRRARTLLVVEALLIIAALV
Ga0307468_1010873221	3300031740	Hardwood Forest Soil	VNPLYVVPLLAYTLAATLWPSQVDGRRRARTLLLVEAVVVIAALVVGTLLARLATP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters