Metagenome Family F078484

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078484
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	107 residues
Representative Sequence	MNGKFLLFGRGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS
Number of Associated Samples	103
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.59 %
% of genes near scaffold ends (potentially truncated)	24.14 %
% of genes from short scaffolds (< 2000 bps)	72.41 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.034 % of family members)
Environment Ontology (ENVO)	Unclassified (55.172 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (35.345 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.31% β-sheet: 0.00% Coil/Unstructured: 38.69%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01575	MaoC_dehydratas	15.52
PF13884	Peptidase_S74	5.17
PF13620	CarboxypepD_reg	2.59
PF00856	SET	2.59
PF00248	Aldo_ket_red	0.86
PF00343	Phosphorylase	0.86
PF05635	23S_rRNA_IVP	0.86
PF01479	S4	0.86
PF01177	Asp_Glu_race	0.86
PF01545	Cation_efflux	0.86
PF00211	Guanylate_cyc	0.86
PF12681	Glyoxalase_2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.86
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.86
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.86
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.86
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	96.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	96.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	73.28 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	11.21 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.28 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	11.21 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.28 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	11.21 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.28 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	11.21 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.28 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	11.21 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402H2QFL	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
2088090014\|GPIPI_17034293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1988	Open in IMG/M
2170459019\|G14TP7Y02HJB9Q	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
2228664021\|ICCgaii200_c0711034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
2228664022\|INPgaii200_c1124216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300000955\|JGI1027J12803_101923765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300001867\|JGI12627J18819_10275413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	677	Open in IMG/M
3300004114\|Ga0062593_103567756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300004156\|Ga0062589_102255215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300004479\|Ga0062595_102423176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005181\|Ga0066678_10674243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300005186\|Ga0066676_10001871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8768	Open in IMG/M
3300005294\|Ga0065705_10805478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300005440\|Ga0070705_101633553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005446\|Ga0066686_10823664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300005451\|Ga0066681_10097769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1676	Open in IMG/M
3300005535\|Ga0070684_101557534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300005553\|Ga0066695_10397812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300005937\|Ga0081455_10020258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6269	Open in IMG/M
3300006046\|Ga0066652_100286463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1457	Open in IMG/M
3300006796\|Ga0066665_10045797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2982	Open in IMG/M
3300007076\|Ga0075435_101098170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300009012\|Ga0066710_100121765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3556	Open in IMG/M
3300009137\|Ga0066709_100609457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1556	Open in IMG/M
3300009143\|Ga0099792_10478273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300010159\|Ga0099796_10158268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300010335\|Ga0134063_10061554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1656	Open in IMG/M
3300010362\|Ga0126377_10281302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1632	Open in IMG/M
3300012198\|Ga0137364_10533478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300012199\|Ga0137383_10235653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1341	Open in IMG/M
3300012200\|Ga0137382_10229497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1282	Open in IMG/M
3300012201\|Ga0137365_10002367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	14937	Open in IMG/M
3300012201\|Ga0137365_10792389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300012202\|Ga0137363_11036099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300012204\|Ga0137374_10056207	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300012208\|Ga0137376_10062348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3080	Open in IMG/M
3300012208\|Ga0137376_10389962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1210	Open in IMG/M
3300012210\|Ga0137378_11686260	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300012354\|Ga0137366_10002974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13124	Open in IMG/M
3300012354\|Ga0137366_10429926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300012354\|Ga0137366_10476869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300012354\|Ga0137366_10562084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300012355\|Ga0137369_10093280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2490	Open in IMG/M
3300012355\|Ga0137369_10101699	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300012357\|Ga0137384_10524967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	971	Open in IMG/M
3300012359\|Ga0137385_11506867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300012915\|Ga0157302_10293517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300012924\|Ga0137413_10011379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4378	Open in IMG/M
3300012929\|Ga0137404_10086438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2498	Open in IMG/M
3300012929\|Ga0137404_10570301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1015	Open in IMG/M
3300012930\|Ga0137407_10060237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3120	Open in IMG/M
3300012972\|Ga0134077_10091341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1170	Open in IMG/M
3300015242\|Ga0137412_10013995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6491	Open in IMG/M
3300015245\|Ga0137409_10534109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999	Open in IMG/M
3300015264\|Ga0137403_10079246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3320	Open in IMG/M
3300015371\|Ga0132258_10532854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2941	Open in IMG/M
3300015371\|Ga0132258_11764638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1560	Open in IMG/M
3300017659\|Ga0134083_10196893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	830	Open in IMG/M
3300018000\|Ga0184604_10007296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2171	Open in IMG/M
3300018027\|Ga0184605_10001736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7124	Open in IMG/M
3300018028\|Ga0184608_10059087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1530	Open in IMG/M
3300018054\|Ga0184621_10272648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300018061\|Ga0184619_10114499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1218	Open in IMG/M
3300018066\|Ga0184617_1280377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300018071\|Ga0184618_10016819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2327	Open in IMG/M
3300018071\|Ga0184618_10020687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2151	Open in IMG/M
3300018072\|Ga0184635_10047615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1650	Open in IMG/M
3300018076\|Ga0184609_10031811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2173	Open in IMG/M
3300018081\|Ga0184625_10398596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300018431\|Ga0066655_11242471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300018433\|Ga0066667_10470790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300019356\|Ga0173481_10074450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1238	Open in IMG/M
3300019866\|Ga0193756_1012401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300019867\|Ga0193704_1054295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300019868\|Ga0193720_1004251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1945	Open in IMG/M
3300019872\|Ga0193754_1001552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1975	Open in IMG/M
3300019875\|Ga0193701_1000559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6217	Open in IMG/M
3300019877\|Ga0193722_1000054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	25646	Open in IMG/M
3300019878\|Ga0193715_1059586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	813	Open in IMG/M
3300019880\|Ga0193712_1013880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1665	Open in IMG/M
3300019881\|Ga0193707_1002263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7018	Open in IMG/M
3300019881\|Ga0193707_1004235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5111	Open in IMG/M
3300019882\|Ga0193713_1004601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4383	Open in IMG/M
3300019885\|Ga0193747_1046468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1079	Open in IMG/M
3300019885\|Ga0193747_1052224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1015	Open in IMG/M
3300019887\|Ga0193729_1012540	All Organisms → cellular organisms → Bacteria	3796	Open in IMG/M
3300019887\|Ga0193729_1014424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3507	Open in IMG/M
3300019999\|Ga0193718_1017094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1608	Open in IMG/M
3300020001\|Ga0193731_1144690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300020002\|Ga0193730_1035354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1448	Open in IMG/M
3300020004\|Ga0193755_1208483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300020006\|Ga0193735_1069255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1021	Open in IMG/M
3300020012\|Ga0193732_1009776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1659	Open in IMG/M
3300020015\|Ga0193734_1001159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4470	Open in IMG/M
3300020018\|Ga0193721_1125873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300020022\|Ga0193733_1028954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1565	Open in IMG/M
3300020062\|Ga0193724_1049339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300021080\|Ga0210382_10213407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300021344\|Ga0193719_10117269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1157	Open in IMG/M
3300021418\|Ga0193695_1013383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1665	Open in IMG/M
3300022694\|Ga0222623_10182732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300022756\|Ga0222622_11381276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300025986\|Ga0207658_10973281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300026324\|Ga0209470_1002843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12115	Open in IMG/M
3300027018\|Ga0208475_1007773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1052	Open in IMG/M
3300027903\|Ga0209488_10383093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1042	Open in IMG/M
3300028718\|Ga0307307_10025321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1662	Open in IMG/M
3300028807\|Ga0307305_10174591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	991	Open in IMG/M
3300028814\|Ga0307302_10095997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1413	Open in IMG/M
3300031057\|Ga0170834_111870976	All Organisms → cellular organisms → Bacteria	3963	Open in IMG/M
3300031128\|Ga0170823_10130316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3493	Open in IMG/M
3300031231\|Ga0170824_113393535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1281	Open in IMG/M
3300031716\|Ga0310813_10577600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300033412\|Ga0310810_11101137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300033412\|Ga0310810_11194571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300033475\|Ga0310811_11195533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.83%
Host-Associated	Host-Associated	4.31%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.76%
Aquatic	Environmental → Aquatic	12.07%
Plants	Host-Associated → Plants	4.31%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.76%
Sediment	Environmental → Aquatic → Sediment	11.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_02813130	2070309009	Soil	MNGKFLLFGADEIENSLMRFVDRKIGEQRRGERRLAEQRTTKHRFQARKSCIADARNYRFARRLPVRAVAQFDSKAPIPARRTYLFGIGWLKKLRNDQLKHWLTAKQAS
GPIPI_00839230	2088090014	Soil	FMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS
4MG_04221520	2170459019	Switchgrass, Maize And Mischanthus Litter	MNGKFLLFGRDEIGNSFMRFVDRKIGEQRHDERRLAEQCTAKHQLQARKSCIADARSYRIARRLPMLAVAQFNWKALIPTRRPYPFGIGWLKKLRNDQLKHSLTAKQAG
ICCgaii200_07110342	2228664021	Soil	MNGKFLLFGRDETESSLIRFVDRKISEQRREELRFAEQRTTKYRVQARNSCIADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIGWLKKLRNEHWQPASDLS
INPgaii200_11242161	2228664022	Soil	LFGRDEIEKSFMRFVDHKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVIAVAQFDWKALIPTCRTYLFGIGWLKKLRNDQLKHWLTAKQAS
JGI1027J12803_1019237651	3300000955	Soil	MNGKFLLFGRDEIGNSFMRFVDRKIGEQRHDERRLAEQCTAKHQLQARKSCIADARSYRIARRLPMLAVAQFNWKALIPTRRPYPFGIGWLKKLRNDQLKHSLTAKQAG*
JGI12627J18819_102754132	3300001867	Forest Soil	MNGKILLFGRDEIENSLMRFVDRKIGEQRRDERRLAEQRTTKHRFQARKSCVADARSYRVARRSPMLAVAQFDWQALIHTPRPYLFGIGWLKKR*
Ga0062593_1035677561	3300004114	Soil	MNGKFLLFGRDEIENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS*
Ga0062589_1022552151	3300004156	Soil	MRTWLSLLLFESFGGQIMNGKFLLFGRDEIENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAK
Ga0062595_1024231761	3300004479	Soil	MNGKFLLFGRDEIGNSFMRFVDRKIGEQRHDERRLAEQCTAKHQLQARKSCIADARSYRIARRLPMLAVAQFNWKALIPTRRPYPFGIGWLKKLRNDQLKHSLTAKQA
Ga0066678_106742432	3300005181	Soil	MNGKFLLFGRGEIENSFVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVRAVAQFDGKTLIPTRRIYLFGIGWLKKLRDDHFKHWLTAKQAG*
Ga0066676_1000187111	3300005186	Soil	MNGKFLLFGEDEIENSLMRFVDRKVGEQRRDERRLAEQRTTKHRFQARKSCVADARSYRIARRLPAPGVARFDWKALIPTRRTYLIGIGWLKKLRNDHLKHWVNAKQVS*
Ga0065705_108054781	3300005294	Switchgrass Rhizosphere	MNGKFLLFDRDEVENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQASW*
Ga0070705_1016335531	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNGKFLLFGRDKVENSLMRFVDHKIGEQRRDERRLAEQRNTKHRFQARKSCIADARSFRVARRLPILAVAQFDWKALIPPRRTYLFGIGWLKKLRNDQLKHWLAA
Ga0066686_108236642	3300005446	Soil	RFADRKISEQRRHERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPSRRTYLFGIGWLKKFRDDHLKHWLTAKQAS*
Ga0066681_100977692	3300005451	Soil	MNGKFLSFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHFKHWLSAKQAS*
Ga0070684_1015575341	3300005535	Corn Rhizosphere	MNGKFLLFGRAETENSLIRFADRKISEQRRDERRLAEQRTTKYRFPARKSCIADARSYRVARRFPSIAIAQFDWKALIPTRRTYLFGIGWLKKLRNEHWQPASDLS*
Ga0066695_103978121	3300005553	Soil	MNGKFLSFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQTS*
Ga0081455_100202589	3300005937	Tabebuia Heterophylla Rhizosphere	MNGKSLFSRGEIDNSLVRFADRKISERRRDERRFAEQRTTKHRFQARQSCVADARSYRVARRFPMLAIGQIDWQALVPHRPHLLEIGWLKKLRYHQLKQWLIAKQMSQ*
Ga0066652_1002864631	3300006046	Soil	TLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHFKHWLSAKQAS*
Ga0066665_100457972	3300006796	Soil	MNGKFLLFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPSRRTYLFGIGWLKKLRDDHFKHWLSAKQAS*
Ga0075435_1010981702	3300007076	Populus Rhizosphere	FAQAETENSLIRFADRKISEQRRDERRYAEQRTTKHRVQARKSCVADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIGWLKKLRNDHWLTAKRAN*
Ga0066710_1001217656	3300009012	Grasslands Soil	MNGKFLSFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHFKHWLSAKQAS
Ga0066709_1006094573	3300009137	Grasslands Soil	MNGKFLLFDRGQIENGLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHVKHWLTAKQAS*
Ga0099792_104782731	3300009143	Vadose Zone Soil	LFGRGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVRAVAQFDWKALIPTRRTYLFGIGWLKKCRNDHLKHWLTAKQAS*
Ga0099796_101582682	3300010159	Vadose Zone Soil	GGQLMNGKFLLFGRGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPIRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0134063_100615543	3300010335	Grasslands Soil	MNGKFLLFDRGQIENGLVRFADRKISEQRLDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLLGIGWLKKLRDDHLKHWLTAKQAS*
Ga0126377_102813022	3300010362	Tropical Forest Soil	MNGKSLFSRGEIDNSLVSFVDRKISERRQDERRFAEQRTTKHRFQARKSCVADARSYRVARRFPMLAVAQIDWQALIPRQPYLLEIGWLKKLRYHQLKQWLIAKQMSQ*
Ga0137364_105334781	3300012198	Vadose Zone Soil	MNGKFLSFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKYRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHFKHWLSAKQAS*
Ga0137383_102356531	3300012199	Vadose Zone Soil	MNGKFLLFGEDESENSLMRFVDRKIGEQRRDERRLAEQRTTKHRFQARKSCIADARNYRIARRLPLRAVAQFDWKALIPARRTYLFGIGWLKKLRNDQLKHWLTAKQAS*
Ga0137382_102294972	3300012200	Vadose Zone Soil	MNGKFLLFGRGEIENSLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0137365_1000236716	3300012201	Vadose Zone Soil	MNGKFLLFGRDKVENGFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARGYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS*
Ga0137365_107923892	3300012201	Vadose Zone Soil	ENSLMRFVDRKIGEQRRDERRLAEQRTTKHRFQARKSCIADARNYRIARRLPLRAVAQFDWKALIPARRTYLFGIGWLKKLRNDQLKHWLTAKQAS*
Ga0137363_110360992	3300012202	Vadose Zone Soil	MNGKFLLFGRGEIENSLVRFADRKIREQRRDERRLAEQGTTKHRIQARRSCVADARSYRVARRFPVRAVAQFDWKTLIPTRRTYLFGTGWLKKLRDDHLKHWIAAKQAS*
Ga0137374_100562074	3300012204	Vadose Zone Soil	MKEKFLLFGRDETANSLMRFVDRKIGEQRRDERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFHWKALIPTRRTYLFGIGWLKKRRNEHWLTAKQAS*
Ga0137376_100623482	3300012208	Vadose Zone Soil	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIDWLKKLRNEHWPTAKQAS*
Ga0137376_103899621	3300012208	Vadose Zone Soil	MNGKFLSFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKYRIQARKSCIADARNYRVARRFPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0137378_116862601	3300012210	Vadose Zone Soil	MNGKFLLFGGGEIENSLARFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGISWLKKLRDDHLKHWLTAKETSQ*
Ga0137366_1000297413	3300012354	Vadose Zone Soil	MNGKFLLFGRDEVENGFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARGYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS*
Ga0137366_104299262	3300012354	Vadose Zone Soil	MNGKFLLFGGDEIENSLMRFVDRKIGEQRRDERRLAEQRTTKHRFQARKSCVADARSYRIARRLPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRNDQLK
Ga0137366_104768692	3300012354	Vadose Zone Soil	MNGKLLLCGGDEIENSLVRFVDRKIGEQRRDERRLAEQRTTKHRFHARKSCIADARNYRIARRLPGRAVAQFDWKALIPAHRTYLFGIGWLKKLRNDQLKHWLTAKQAG*
Ga0137366_105620841	3300012354	Vadose Zone Soil	MNGKFLLFGGGDIENSLVRFADRKISEQRRDERRLAEQRTTKHRIQARQSCIADARSYRVARRFPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0137369_100932806	3300012355	Vadose Zone Soil	MNGKFLLFGGDEIKNSLMRFVDRKIGEQRRDERRLAEQRTTKHRFQARKSCIADARNYRIARRLPVRAVAQFDWKALIPSRRTYLFGMGWLKKLQNDQLKHWLTAKQAS*
Ga0137369_101016993	3300012355	Vadose Zone Soil	MKEKFLLFGRDETANSLMRFVDRKIGEQRRDERRLAEQRTTKHRIEAKKSCIADARSYRVARRFLVLAVAQFHWKALIPTRRTYLFGIGWLKKRRNEHWLTAKQAS*
Ga0137384_105249672	3300012357	Vadose Zone Soil	MNGKFLLFGGGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGISWLKKLRDDHLKHWLTAKETSQ*
Ga0137385_115068672	3300012359	Vadose Zone Soil	ADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGISWLKKLRDDHLKHWLTAKETSQ*
Ga0157302_102935171	3300012915	Soil	MNGKFLLFGRDEIENSFMRFVDRKIREQRHDERRLAEQCTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS*
Ga0137413_100113797	3300012924	Vadose Zone Soil	MNGKFLLFGRGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0137404_100864383	3300012929	Vadose Zone Soil	MNGKFLLFGRDETQNSLIRFVDRKISEQRRDERRLAEQRTTKYRFQARKSCVADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIGWLKKLRNDQLKHWRPASDLS*
Ga0137404_105703012	3300012929	Vadose Zone Soil	MNGKFLLFGRGEIENSLVRFADRKIREQRRDERWLAEQRTTKHRIQARKSCIADARNYRVARRFPVRAVAQFDWKTLIPTRRSYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0137407_100602375	3300012930	Vadose Zone Soil	MNGKFLLFGRDETQNSLIRFVDRKISEQRRDERRLAEQRTTKYRFQARKSCVADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0134077_100913412	3300012972	Grasslands Soil	MNGKFLLFGRGEIEYTLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKFRDDHLKHWLTAKQAS*
Ga0137412_1001399512	3300015242	Vadose Zone Soil	KFLLFGRGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0137409_105341091	3300015245	Vadose Zone Soil	FLLFGRDETESSLIRFVDRKISEQRREERRFAEQRTTKYRVQARNSCIADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIGCLKKLRDDHLKHWLTAKQAS*
Ga0137403_100792463	3300015264	Vadose Zone Soil	MNGKFLLFGRGEIENSLVRFADRKIREQRRDERWLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS*
Ga0132258_105328542	3300015371	Arabidopsis Rhizosphere	MHGKFLLFGRVETENSLIRFADRKISEQRRDERRLAEQRTTKYRFPARKSCIADARSYRVARRFPSIAIAQFDWKALIPTRRTYLFGIGWLKKLRNDQLKNWLTAKQSS*
Ga0132258_117646382	3300015371	Arabidopsis Rhizosphere	MIWGEVMIGKFLLFGRDETESSLIRFADRKISEQRRDERRYAEQRTTKYRVQARNSCVADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIGWRQKHRNEHWLTAKPASQ*
Ga0134083_101968932	3300017659	Grasslands Soil	FGEDEIENSLMRFVDRKVGEQRRDERRLAEQRTTKHRFQARKSCVADARSYRIARRLPAPGVARFDWKALIPARRTYLIGIGWLKKLRNDHLKHWVNAKQVS
Ga0184604_100072962	3300018000	Groundwater Sediment	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIDWLKKLRKDQLKHWRPAGDLS
Ga0184605_100017366	3300018027	Groundwater Sediment	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARSYRVARRFPVLAIAQFDWKALIPTRRTYLFGIDWLKKLRKDQLKHWRPAGDLS
Ga0184608_100590873	3300018028	Groundwater Sediment	MNGKFLLFGRDETESSLIRFVDRKISEQRRDERRFAEQRTTKYRVQARNSCIADARNYRVARRFPLLAITQFDWKALIPTRRTYLFGIGW
Ga0184621_102726481	3300018054	Groundwater Sediment	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARNYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRNDQLKHWLTAKEAS
Ga0184619_101144993	3300018061	Groundwater Sediment	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKLRDDHLKHWLAAKQTS
Ga0184617_12803772	3300018066	Groundwater Sediment	MIGKFLLFGRAETENSLIRFADRKISEQRRDERRYAEQRTTKHRVQARNSCVADARSYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRSD
Ga0184618_100168192	3300018071	Groundwater Sediment	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARSYRIARRFPVLAIAQFDWKALIPTRRTYLFGIDWLKKLRKDQLKHWRPAGDLS
Ga0184618_100206875	3300018071	Groundwater Sediment	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTAKQAS
Ga0184635_100476152	3300018072	Groundwater Sediment	MSQIIEATKSKGPLLLFEWFGGQLMNGKFFLFGRDEIENSLVRFADRKIGEQRRDDRRLAEQRTTKYRFQARKSCIADARSYRVARRFPMLAVAQFDWKDLIPTRRTYLFGISWLKKLRNDQLKHWLTAKEAS
Ga0184609_100318114	3300018076	Groundwater Sediment	MNGKFFLFGRDEIENSLVRFADRKIGEQRRDDRRLAEQRTTKYRFQARKSCIADARSYRVARRFPMLAVAQFDWKDLIPTRRTYLFGISWLKKLRNDQLKHWLTAKEAS
Ga0184625_103985962	3300018081	Groundwater Sediment	MNGKFLLFGRDETESSLIRFVDRKISEQRRDERRFAEQRTTKYRVQARNSCIADARNYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRNDQLKHWLTAKQAS
Ga0066655_112424711	3300018431	Grasslands Soil	MNGKFLLFDRGQIENGLVRFADRKISEQRRHERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQAS
Ga0066667_104707902	3300018433	Grasslands Soil	MNGKFLLFGRGEIENTLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRWPVRAVAQFDWKTLIPTRRTYLFGIGWLKKLRDDHLKHWLTAKQTS
Ga0173481_100744502	3300019356	Soil	MNGKFLLFGRDEIENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS
Ga0193756_10124011	3300019866	Soil	MNVKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKEPRNDQHKHWLTAKQAS
Ga0193704_10542952	3300019867	Soil	MIGKFLLYGRAETENSLIRFADRKINEQRRDERRTTKHRVQARNSCVADARSYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRSDQLKHWRPASDLS
Ga0193720_10042512	3300019868	Soil	MNGKFLLFGRAETENSLIRFADRKISEQRRDERRCAEQRTTKHKVQARNSCIADARSYRVARRFPLLAIAQIDWKALIPTRRTYLFGIDWLKKLRNKHWLTANQAS
Ga0193754_10015524	3300019872	Soil	MNVKFLLFGRDETENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGI
Ga0193701_10005591	3300019875	Soil	MNGKFLLFGRDETESSLIRFVDRKISEQRRDERRFAEQRTTKYRVQARNSCIADARNYRVARRFPLLAITQFDWKALIPTRRTYLFGIDWLKKLRKDQLKHWRPAGDLS
Ga0193722_10000546	3300019877	Soil	MNIKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKPRNDQHKHWLTAKQAS
Ga0193715_10595862	3300019878	Soil	MNGKFLLFGRDEIDNSLIRFVDRKIGEQRRDERRLAEQRTTKHRIQARKSCIADARSYLFGIGWLRKRRNEHWLTAKQIS
Ga0193712_10138803	3300019880	Soil	MNVKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADGFPVLAVAQFDWKALIPTRRTYLFGIGWLKKPRNDQHKHWLTAKQAS
Ga0193707_10022636	3300019881	Soil	MNVKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKPRNDQHKHWLTAKQAS
Ga0193707_100423511	3300019881	Soil	MIGGQLMNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTAKQASY
Ga0193713_10046014	3300019882	Soil	MNIKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKEPRNDQHKHWLTAKQAS
Ga0193747_10464681	3300019885	Soil	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTAKQASY
Ga0193747_10522242	3300019885	Soil	MNGKFLLFGRDEIDNSLIRFVDRKIGEQRRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVLAVAQFDWKALIPTCRIYLFGIGWLRKRRNEHWLTAKQIS
Ga0193729_10125406	3300019887	Soil	MNGKFLLFGRGEIENSLVRFADRKISEQRRDERRLAEQRTTKHRIQARKSCIADARNYRVARRFPVRAVAQFDWKTLIPTRQTYLFGIGWLKKLRDDHLKHWLTAKQVS
Ga0193729_10144248	3300019887	Soil	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTHLFGIGWLKKRRNKHWLTAKQAS
Ga0193718_10170941	3300019999	Soil	MNVKFLLFGRDETENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKPRNDQHKHWLTAKQAS
Ga0193731_11446901	3300020001	Soil	MIGGQLMNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVTQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTAKQAS
Ga0193730_10353543	3300020002	Soil	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTAKQASL
Ga0193755_12084831	3300020004	Soil	VFFTEWFGGQLMNVKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKEPRNDQHKHWLTAKQAS
Ga0193735_10692552	3300020006	Soil	MIGKFLLFGRAETENSLIRFADRKISEQRRDERRYAEQRTTKHRVQARNSCVADARSYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRSDQLKHWRPASDLS
Ga0193732_10097761	3300020012	Soil	MNGKFLLFGRAETENSLIRFADRKISEQRREERRFAEQRTTKHRVQARNSCIADARNYRVARRFPLLAIAQFDWKALIPARRTYLFGIDWLKKLRNKHWLTAKQAS
Ga0193734_10011594	3300020015	Soil	MIGKFLLYGRAETENSLIRFADRKINEQRRDERRYAEQRTTKHRVQARNSCVADARSYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRSDQLKHWRPASDLS
Ga0193721_11258731	3300020018	Soil	MNGKFLLFGRDEIDNSLIRFVDRKIGEQRRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRIYLFGIGWLRKRRNEHWLTAKQIS
Ga0193733_10289541	3300020022	Soil	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTHLFGIGCLKKRRNEHWLTAKQAS
Ga0193724_10493391	3300020062	Soil	MNVKFLLFGRDEIENSLVRFADRKISEQHRAERRLAEQRTTRYRFQARKSCVADARSYRVARRFPVLAVAQFDWKALIPKRRTYLFGIGWLKKPRNDQHKHWLTAKQAS
Ga0210382_102134072	3300021080	Groundwater Sediment	MNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTA
Ga0193719_101172691	3300021344	Soil	VDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVTQFDWKALIPTRRTYLFGIGWLKKRRNKHWLTAKQASY
Ga0193695_10133832	3300021418	Soil	MIGGQLMNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQAKKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTHLFGIGCLKKRRNEHWLTAKQAS
Ga0222623_101827321	3300022694	Groundwater Sediment	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARSYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRNDQLKHWLTAKQAS
Ga0222622_113812761	3300022756	Groundwater Sediment	IGKFLLYGRAETENSLIRFADRKINEQRRDERRYAEQRTTKHRVQARNSCVADARSYRVARRFPLLAITQFDWKALIPTRRTYLFGIGWLKKLRSDQLKHWRPASDLS
Ga0207658_109732811	3300025986	Switchgrass Rhizosphere	MNGKFLLFGRAETENSLIRFADRKISEQRRDERRLAEQRTTKYRFPARKSCIADARSYRVARRFPSIAIAQFDWKALIPTRRTYLFGIGWLKKLRNDQLKNWLTAKQSS
Ga0209470_100284316	3300026324	Soil	MNGKFLLFGEDEIENSLMRFVDRKVGEQRRDERRLAEQRTTKHRFQARKSCVADARSYRIARRLPAPGVARFDWKALIPTRRTYLIGIGWLKKLRNDHLKHWVNAKQVS
Ga0208475_10077731	3300027018	Soil	MNGKFLLFGRDEIGNSFMRFVDRKIGEQRHDERRLAEQCTAKHQLQARKSCIADARSYRIARRLPMLAVAQFNWKALIPTRRPYPFGIGWLKKLRNDQLKHWLTAKQAS
Ga0209488_103830931	3300027903	Vadose Zone Soil	LFGRGEIENSLVRFADRKISEQLRDERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVRAVAQFDWKALIPTRRTYLFGIGWLKKCRNDHLKHWLTAKQAS
Ga0307307_100253213	3300028718	Soil	MNGKFLLFGRDEIENSLIRFVDRKISEQRRDERRFAEQRTTKHKVQARNSCIADARSYRVARRFPVLAIAQFDWKALIPTRRTYLFGIDWLKKLRNKHWLTANQAS
Ga0307305_101745912	3300028807	Soil	MIGGQLMNGKFLLFGRDEIANSLMRFVDRKIGEQRQGERRLAEQRTTKHRIQARKSCIADARSYRVARRFPVLAVAQFDWKALIPTRRTYLFGIGCLKKRRNKHWLTAKQAS
Ga0307302_100959974	3300028814	Soil	MNGKFLLFGRDETENSLIHFVDRKISEQRRNERRYAEQRTTKHRVQARNSCIADARSYRVARRFPLLAIAQFDWKALIPTRRTYLFGIDWLKKLRNEHWLTAKQES
Ga0170834_1118709764	3300031057	Forest Soil	MNGKFPLFGRDQIEKSFVHLVDRSIREQRREDRQLAEQRATKHRFQARKSCVADARSYRIARRLPVLAVALIDWKNLIPIGRPLFGSAWLKKFREDQLKHWLSAKQTS
Ga0170823_101303163	3300031128	Forest Soil	MNGKFPLFGRDQIEKSFVHLVDRSIREQRREDRQLAEQRATKHRFQARKSCVADARSYRIARRLPVLTVALIDWKNLIPIGRPLFGGAWLKKFREDQLKHWLSAKQTS
Ga0170824_1133935353	3300031231	Forest Soil	MNGKFPLFGRDEIENSFMHLVDRSIREQRREDRQLAEQRATKHRFQARKSCVADARSYRIARRLPVLAVALIDWKNLIPIGRPLFGSAWLKKFREDQLKHWLSAKQTS
Ga0310813_105776002	3300031716	Soil	MNGKFPLFGRNEIENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS
Ga0310810_111011371	3300033412	Soil	PTMRTWLSLLLFVSFGGQIMNGKFLLFGRDEVENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS
Ga0310810_111945711	3300033412	Soil	MNGKFLLFGRDEIGNSFMRFVDRKIGEQRHDERRLAEQCTAKHQLQARKSCIADARSYRIARRLPMLAVAQFNWKALIPTRRPYPFGIGWLKKLRNDQLKPLANR
Ga0310811_111955331	3300033475	Soil	KFLLFGRDEVENSFMRFVDRKIREQRHDERRLAEQRTAKHQLQARKSCIADARSYRVARRLPVLAVAQFGWKALIPTRRTYLFGIAWLKKLRNDQLKHWLTAKQAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences