Metagenome / Metatranscriptome Family F078464

Overview

Basic Information

• Family ID: F078464
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 116
• Average Sequence Length: 69 residues
• Representative Sequence: GIGEVVEGALATVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV
• Number of Associated Samples: 80
• Number of Associated Scaffolds: 116

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 27.83 %
• % of genes near scaffold ends (potentially truncated): 48.28 %
• % of genes from short scaffolds (< 2000 bps): 93.10 %
• Associated GOLD sequencing projects: 78
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (98.276 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.172 % of family members)
• Environment Ontology (ENVO): Unclassified (36.207 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (53.448 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 6.45%
  β-sheet: 0.00%
  Coil/Unstructured: 93.55%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF12762	DDE_Tnp_IS1595	8.62
PF13614	AAA_31	1.72
PF02416	TatA_B_E	1.72
PF13358	DDE_3	1.72
PF01610	DDE_Tnp_ISL3	0.86
PF03633	Glyco_hydro_65C	0.86
PF01381	HTH_3	0.86
PF13424	TPR_12	0.86
PF04191	PEMT	0.86
PF00296	Bac_luciferase	0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	1.72
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.86
COG1074	3’-5’ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.86
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.86
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.86
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.86
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.86
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.86
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.28 %
Unclassified	root	N/A	1.72 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.28 %
Unclassified	root	N/A	1.72 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.28 %
Unclassified	root	N/A	1.72 %

Level 4

Name	Rank	Taxonomy	Distribution
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.62 %
Unclassified	root	N/A	1.72 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.86 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	83.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.72 %
Unclassified	root	N/A	1.72 %

Level 6

Name	Rank	Taxonomy	Distribution
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.72 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.72 %
Unclassified	root	N/A	1.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.86 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.86 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.72 %
Unclassified	root	N/A	1.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.86 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.86 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.72 %
Unclassified	root	N/A	1.72 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.86 %
Unclassified	root	N/A	1.72 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.72 %

Level 10

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.86 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.72 %
Unclassified	root	N/A	1.72 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000955|JGI1027J12803_100243709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	566
3300005181|Ga0066678_10790921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	628
3300005289|Ga0065704_10236376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1028
3300005295|Ga0065707_10292486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1022
3300005332|Ga0066388_100676984	All Organisms → cellular organisms → Bacteria	1642
3300005332|Ga0066388_102507679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	937
3300005332|Ga0066388_108260165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	519
3300005347|Ga0070668_100628475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	942
3300005445|Ga0070708_100338403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1418
3300005447|Ga0066689_10990161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	518

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.90%
Host-Associated	Host-Associated	18.10%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	18.10%
Terrestrial	Environmental → Terrestrial	81.90%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.52%
Soil	Environmental → Terrestrial → Soil	81.90%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Sand	Environmental → Terrestrial → Soil → Sand	2.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.66%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.17%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1002437091	3300000955	Soil	MSEIVEGALAAITPVTLTPGAIVVLPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0066678_107909212	3300005181	Soil	VWQRPLALVQHGIGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0065704_102363761	3300005289	Switchgrass Rhizosphere	PLTPVEQGMGKVVEGALAAVTPVAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0065707_102924861	3300005295	Switchgrass Rhizosphere	MGKVVEGALAAVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0066388_1006769841	3300005332	Tropical Forest Soil	EVVKGALTAVAPVAFAPRAIVVIAPRIDSVALAPGTLEWTIFPSQRMEVGLTLFDVEELVDVREHWHG*
Ga0066388_1025076792	3300005332	Tropical Forest Soil	MGEVIEGAFATVAPVTFTPGAVVIRPPRIDVLALAPGTLEGTIFPPQRMDVGLTLVDIEELVDV*
Ga0066388_1082601651	3300005332	Tropical Forest Soil	AAVTPVAFTPGAIVVRPPRIDVLTLAPGTLERPLFPPQHMDVGLTLVDVKEMVKV*
Ga0070668_1006284751	3300005347	Switchgrass Rhizosphere	GIGEVVEGALATVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0070708_1003384032	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIVEGALATMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRVDVRLALFEAEELVDI*
Ga0066689_109901611	3300005447	Soil	MGEVIEGAVAPVTPVAFTPGSIVILPPRIHIPALAPGTLEGAIFPPQRMDVGLTLVDVEELV
Ga0066681_109188822	3300005451	Soil	LGEVIEGALAAVAPVAFTPGTIVVLPPWIDIPPLAPGTLEGTIFPPQRMDIGLTLVDVEELVDV*
Ga0066687_105079252	3300005454	Soil	MQQGVGEIIEGTLAAVAPVAFAAGAIVVRPPRIDVLALAPGTLEGAIFPAQRVDVGLALSDVEEVVDVREHGHG*
Ga0068867_1018861041	3300005459	Miscanthus Rhizosphere	GVGEIVEGALAAVTPGAFTPGSIVVIPPGIDVLALASGTLEGTIFPPQCMEVGLTLVGAEEVVDVREHGHR*
Ga0070698_1003282461	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GVGEIVEGALAAVTPVAFAPGAVVVLPPRIDVLALAPGTLEWSLFPPQRMDVGVTLFGVEEVVDVREHRHG*
Ga0070697_1005524272	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RLQPSHQVAFAAGAVVVLPPRIDVLALAPGTLERTLFPSQCMDVGLTLFDVEELVDVREHRHG*
Ga0070695_1017514132	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGEVIEGALAPVTPVAFTPGSIVILPPRIHIPALAPGTLEGTIFPPQRMDVGLTLV
Ga0066691_105502492	3300005586	Soil	GEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0066903_1063219842	3300005764	Tropical Forest Soil	IIEGALAAVTPVAFASGTVVIRPPRIDVLALAPGTLEGPIFPPERMDIDVAAIGVEELVDV*
Ga0075417_107083732	3300006049	Populus Rhizosphere	EQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPSQRMDVGLTLFAVEELVDVRKHWHG*
Ga0066665_113957781	3300006796	Soil	VWQRPLALVQHGIGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREH
Ga0075428_1002450722	3300006844	Populus Rhizosphere	MEHRIGEVIEGALAAVAPIAFTVWAIVIRPPRIDGLALAPGTLERTLFPPQRVDVGLTVFDVEELMEVRKRRHR*
Ga0075431_1008826412	3300006847	Populus Rhizosphere	MREIVEGALAAITPVALTPGAIVVRPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0075420_1001850261	3300006853	Populus Rhizosphere	VEQGSGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDVGLTLV
Ga0075420_1017088332	3300006853	Populus Rhizosphere	AGKYYVLRPRERLQIIEGALAAITPVAFASGSIVIRPPRIDVLALAPGTLEGTIFPPQRMNIDVAAISVEEVVEV*
Ga0075429_1007523832	3300006880	Populus Rhizosphere	MEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPSQRMDVGLTLFAVEELVDVRKHWHG*
Ga0075419_109272192	3300006969	Populus Rhizosphere	MEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPPQRMDVGVTLIDVEELVDV*
Ga0075419_109539111	3300006969	Populus Rhizosphere	GALAAVTPVAFAAGAVVVLPPRIDVLALASGTLKGAIFPSQRMDVGVTLVNVEEVVDVCKHRHG*
Ga0099829_112009042	3300009038	Vadose Zone Soil	MGQIVEGALAAVAPVAFAAGAVVVIAPRINVVALTAGALQWAIFPSQRMDVDLTLVDVEEVVDV*
Ga0099829_117725321	3300009038	Vadose Zone Soil	RPLTLVQQGIGEVIEGALAAVAPVAFAPRSVVVIAPRIDILALTPGTLERPIFPPQRMDVGLTLVDVEEVVYV*
Ga0099828_101236592	3300009089	Vadose Zone Soil	MEQRIGEIVEGALAAVTPGAFTPRSVVVITPGVDVLALAPGTLKRTIFPPQCMDVGLTLVDVEKLVDVREHRHG*
Ga0099828_119073391	3300009089	Vadose Zone Soil	VEGALAAVTPVAFAPGSVVVLPPRVDVLALAPGTLEWAIFLSQRMDVGLTLIDVEELVDV
Ga0075418_105556153	3300009100	Populus Rhizosphere	SLAAIAPVAFTPGAVVIRAPRINVVALAPGTLQRALFPAQRMNVGLTLFGVEELVDVREHWHR*
Ga0075418_127938702	3300009100	Populus Rhizosphere	VEQCIGQIIEGALAAVTPVAFAAGAVVIPPPRIDVLALAPGTLEGPIFPPERMDIDLAAIGVEEVVEV*
Ga0075423_102799952	3300009162	Populus Rhizosphere	MHHRIGEIVESALAAVAPVAFAPRSVVVRPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0075423_126495852	3300009162	Populus Rhizosphere	CEGALAAVQECACEVIEGALATVTPVPFTPGAIVVRPLRIDISALAPGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0075423_131089521	3300009162	Populus Rhizosphere	VVEGALAAVAPVAFAPRSVVVIAPRINVLALAPGTLERTIFPSQCMNIGLTPFGVEEVVEI*
Ga0105242_129421491	3300009176	Miscanthus Rhizosphere	MRQRPLALMEHSVGEIVEGALAAVAPVALTPGAVVVRAPRIDVLALAPGTLQGTIFPPQRMDVGLTLVDVEELVDV*
Ga0126374_105276782	3300009792	Tropical Forest Soil	RQRPLAAVEQSSGEVVEGTLAAVTPVAFTPGAIVVRPPRIDVLTLAPGTLERPLFPPQHMDVGLTLVDVKEMVKV*
Ga0126374_111479951	3300009792	Tropical Forest Soil	ALVQQGVGEVIEGALAPVTPVALTPGAVVVLPPRIDVLALAPGTLESPIFPPECMDVGVTLVDVEELMEV*
Ga0105067_10700881	3300009812	Groundwater Sand	VEQGIGEVVEGALAAVTPVAFAPGSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0105062_10826922	3300009817	Groundwater Sand	MHHRIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126313_107853172	3300009840	Serpentine Soil	MGKVVEGALAAVTPVAFAPGAVVVRPPRIDVLALAPGTLEWTIFPPEPMDIGVAGIGVEELVYVRKHRHG*
Ga0105074_10044471	3300010029	Groundwater Sand	QNPVRQRPLALMHHRIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126315_102273651	3300010038	Serpentine Soil	PVWERPLALVEHGVSEIIEGTLAAVTPVAFASGAVVIIPPRIHVLALAPGTLQGTIFPPQCMDVGLTLVGVEELVDV*
Ga0126380_112624001	3300010043	Tropical Forest Soil	MEQGRGEVVEGALAPVTPVPFTPGAIVVRPPRIDISALAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0134086_101063171	3300010323	Grasslands Soil	ALAAIAPVALAPGSIVVLPPRIEVLALAPGTLEGAIFPPQRMDIGLTLVDVKELVDV*
Ga0134086_103668001	3300010323	Grasslands Soil	EIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLVGIEELVEVREHWHG*
Ga0134080_100794882	3300010333	Grasslands Soil	MHHRIGEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126370_101652151	3300010358	Tropical Forest Soil	GALAAITPVAFASGSIVICPPRIDVPALAPGTLEGPLFPPERMDIDVAAIGVEEVVDV*
Ga0126370_120147261	3300010358	Tropical Forest Soil	MGEVIEGALAPVTPVPFTAGAIVIRPPRIDISALAPGTLEGTIFPPQRMDVRLALFGIKEVVQMREYRHG*
Ga0126376_112777301	3300010359	Tropical Forest Soil	VEGAPTAVAPGAFASGSVVIIAPWIDSLALAPGTLEWTFFPSQRLDVRVTLFGVEELVDVREHQHG*
Ga0126376_118194811	3300010359	Tropical Forest Soil	MREIVEGALAAMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRMDVCLALFEAEELVDI*
Ga0126372_101591191	3300010360	Tropical Forest Soil	PLALMEHGVGEIVEGALAAVTPGAFASGTVVIRPPRIDVLALAPGTLEGPIFPLERMDIDVAAIGVEELVDV*
Ga0126372_102016121	3300010360	Tropical Forest Soil	MEERIGEVIEGALAAVAPVAFTSGSVVISPPRIDILALAPGTLEGALYPPERVARGVAGSGVEELVDIREHRHG*
Ga0126372_119225811	3300010360	Tropical Forest Soil	MRESVAGALAAITPGALTPGAIVVRPPGIDVVTLAPGTLEGTICSPQRMDVGLA
Ga0126377_109188661	3300010362	Tropical Forest Soil	QKGGQEPVRQRSLALVEQSIGEVVEGALAPIAPVAFAPGPVVVRTPRIDIGALTSGALESPIFPPQRMDVGLTLFSAEELVDV*
Ga0126377_120545331	3300010362	Tropical Forest Soil	MGEVIEGAVAPVAPVTFTPGSVVIRPPRIDVLALAPGTLEGTIFPPQRMDVGLTLVDIE
Ga0126379_103549042	3300010366	Tropical Forest Soil	VEQGISEVIEGALAAVAPITFAPRSIVVHSPWVDVLALAPRTLEGTIFPPQRMDIDVAAIGVEEVVDVCKHWHG*
Ga0126379_115791352	3300010366	Tropical Forest Soil	MEEGISEVVEGALAPVTPVAFAPGAVVIRPPRIDVLALAPGTLEWAILPPQRMDVGVTLFGVEEVVDV*
Ga0126379_125358971	3300010366	Tropical Forest Soil	MEERIGQVIEGAFAAVTPVAFAAGAVVVRAPWIDVLALAPGTLEWAIFPPQRMDIGLTLVNVEELVDI*
Ga0126379_135576002	3300010366	Tropical Forest Soil	RPLAPVEQGMREIVEGALAAITPVALTPGAIVVLPPGIDVVTLAPGTLEGTIFPPQRMDVCLARFEAEELVDI*
Ga0126381_1015652432	3300010376	Tropical Forest Soil	MGEVIEGALATVTPVPFTPGSIVILPPRIHIPALAPGTLEGAIFPPQRMDVGLTLVDVEELVEV
Ga0134122_109877162	3300010400	Terrestrial Soil	VEQGIGEVVEGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0120191_101327452	3300012022	Terrestrial	MKGALAAVAPVAFAAGAIMVVPPRIDILALAPGTLEGPIFPPERMDIDVAAIGVEEVVEV
Ga0137389_118029932	3300012096	Vadose Zone Soil	GEVVEGAFAAVAPGAFTPGSIVIRPPRIDVLALAPGTLEGTIFPSQRMDVDLTLVDVEEVVDVCKHRHG*
Ga0137363_100985932	3300012202	Vadose Zone Soil	MQQGIGQVIEGTLAAVAPVTFASGAVVVRPPRIDVLALAPGTLECAIFPSQRVDVGLALIDVEELVEVREHWHG*
Ga0137363_116722282	3300012202	Vadose Zone Soil	MQQGIDEIIEGALATVAPGAFAAGAIMVRPPRIDVLALAPGTLERTLFPSQCMDGGLTLFDVEELVDVREHRHG*
Ga0137362_103404572	3300012205	Vadose Zone Soil	MGEVVEGALAAVTPVTFTPGAIVVIPPRIDVLALAPGTLERVLFPPERMDVGLTVFGVEELVDV*
Ga0137380_104586442	3300012206	Vadose Zone Soil	LAAITPVAFAAGAIVVRPPRINVLALTPGTLEGPIFPPECVDVRLALFGTEELMEV*
Ga0137380_110004612	3300012206	Vadose Zone Soil	MGQIVEGALAAMAPVALAPGAIVVLPPRIDILALAPVTLEGPIFPSQRMDVGVTLVDVEEFVHVREHWHR*
Ga0137380_112904482	3300012206	Vadose Zone Soil	MSEIVEGALAAITPVTLTPGAIVVLPPRIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0137380_114782531	3300012206	Vadose Zone Soil	EIVEGALAAVAPVAFASGSVVIIAPWIDSVALAPGTLEGTIFPSQRMDVGLTLFGVEEVVDVREHRHG*
Ga0137381_103397512	3300012207	Vadose Zone Soil	MSEIVEGALAAMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0137381_103971372	3300012207	Vadose Zone Soil	MHHRIGEIVESALAAVAPVAFAPRSVVVLPSRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137381_108985951	3300012207	Vadose Zone Soil	VEQRIGQILEGALAAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137381_113535022	3300012207	Vadose Zone Soil	MEQGLGEVVEGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137379_102118332	3300012209	Vadose Zone Soil	MEQGLGEVVEGALATVTPVAFAPGAVVVRPPRIDVLALAPGTLEWAIFPPQRMDVVVTLFGVEEVVDV*
Ga0137379_111441192	3300012209	Vadose Zone Soil	VQEGLGEVVEGALAAVTPIAFAAGAVVVLPPGIDVLALAPGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137378_103124321	3300012210	Vadose Zone Soil	QNPVRQRPPTLVEQGIGEIVEGALATVTPVAFAAGSVVVIPPRIDISALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137377_115935461	3300012211	Vadose Zone Soil	MEQRIGEVVEGALTAVAPVAFASGSVVIIAPWIDSVALAPGTLEWTIFPSQRMDVGLTLFGVEEVVDVREHRHG*
Ga0137387_101007511	3300012349	Vadose Zone Soil	VRQRPLTLVEQRIGQILEGALAAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137384_109516901	3300012357	Vadose Zone Soil	VEQRIGQILEGALTAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137385_107488782	3300012359	Vadose Zone Soil	MEQGLGEVVEGALAPVTPVAFAPGAVVVRPPRIDVLALAPGTLEWAIFPPQGMDVVVTLFGVEEVVDV*
Ga0137385_108975502	3300012359	Vadose Zone Soil	EHGVGEIIEGTLAAVTPVAFASGSVVIIPPRINVMALAPGTLQGKIFPPQRMDVGLTLVGVEEV*
Ga0137361_104545521	3300012362	Vadose Zone Soil	PTLVEQGIGEVVEGALTTVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEEFVDV*
Ga0137390_105410901	3300012363	Vadose Zone Soil	AVVVFAPRIHVVALTAGALQWAIFPSRRMDVDLTLVDVEEVVDVCKHRHG*
Ga0137359_104502861	3300012923	Vadose Zone Soil	MQQGLGEVVAGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137359_115248442	3300012923	Vadose Zone Soil	IGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137404_114470581	3300012929	Vadose Zone Soil	MEQGMGEVVEGALAAVTPVAFAAGSIVVLAPWVDVWAVTPGTLEWTIFPPECMNICLALFGVEELVQMREHWHG*
Ga0137404_116710412	3300012929	Vadose Zone Soil	MHHRIGEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLAGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137407_103190383	3300012930	Vadose Zone Soil	MQQGIGQVIEGTLAAVAPVTLASGAVVVRPPRIDVLALAPGTLECAIFPSQRVDGGLALIDVEELVEVREHWHG*
Ga0137407_111883482	3300012930	Vadose Zone Soil	MHHRIGEIVEGALAAVAPVAFAPRSVVVIAPRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0137407_119212661	3300012930	Vadose Zone Soil	LAAVTPVAFAAGAVVVLPPGIDVLALASGTLEGPIFPSQRMNVGLTLVDVEELVDVCKHRHG*
Ga0137407_122355372	3300012930	Vadose Zone Soil	ERPFALMQQGIGEIIEGALATVAPVAFAAGAIMVRPPRIDVLALAPGTLERTLFPSQCMDVGLTLFDVEELVDVREHRHG*
Ga0126375_111880141	3300012948	Tropical Forest Soil	VEQGLGEVVEGALATVTPVSFTPGAIVVLPPRIDILALAPRTLERTIFPPERVDVSLTVFGVEEVVDI*
Ga0126375_112544212	3300012948	Tropical Forest Soil	VEQGVGKVIEGAFAAVTPVAFTAGAVVVRPPRINVLALAPGTLKGTLFPPQRMDIGVTLIDVEEVVEVREHWHE*
Ga0126375_118069531	3300012948	Tropical Forest Soil	VQQGIGEVIEGALAPVAPVAFAAGAVVILPPRINVLALAPGTLEGAIFPPERMDVGVTLSDVEEVVDVRGHGHG*
Ga0164300_105600011	3300012951	Soil	MEQGIGEVVEGALAAVTPVAFAAGSIVVLAPRVDVWAVTPGTLEWTIFPPECMNICLALFGVEELVQMREHWHG*
Ga0126369_101254722	3300012971	Tropical Forest Soil	MNSIEGALAAVTPVAFASGTVAIHPPRIDVLALAPGTLEGPLFPPERMDIDVAAIGVEEVVDV*
Ga0126369_119269831	3300012971	Tropical Forest Soil	LALVEQSIGEVVEGALAPIAPVAFAPGAVVVRTPRIDVLALAPGALEEPIFPPQRMDVGLTLVDVEELVDV*
Ga0157375_106820622	3300013308	Miscanthus Rhizosphere	EQGVGQVIEGAFAAVKPVAFGAGAVVVCPPRINVLALAPGTLKGPLFPPQRMDVGVTVFGVEELVDV*
Ga0182001_104663541	3300014488	Soil	MGEVVEGAVAAVAPVAQTPGSIVVRPPRIDVLALASGTLEWAIFPPQRMDIGVTLVDVEALVDVGEDRHG*
Ga0157379_101405971	3300014968	Switchgrass Rhizosphere	VEQGVGQVIEGAFAAVKPVAFGAGAVVVCPPRINVLALAPGTLKGPLFPPQRMDVGVTVFGVEELVDV*
Ga0137405_12341201	3300015053	Vadose Zone Soil	QNPVRQWPLTLVEQGMGEVVEGALAAVTPVTFTPGSIVVIPPRIDVLALAPRTLEWTIFPPQRMNVNLTLVDVEELVDV*
Ga0132255_1029632431	3300015374	Arabidopsis Rhizosphere	AVTPVAFASRAVVVRAPWIDVLALAPGTLEGAIFPPQCMDIALTLVNVEELVDIREHRHE
Ga0182039_119688642	3300016422	Soil	MSEIVEGALAAITPVALTPGAIVVRPPGIDVVTLAPGTLEGTIFPPQRMDVRLALFEAEELVDIGKRRHR
Ga0207665_100920881	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRERPFALMQQGIGEIIEGALATVAPVAFAAGAIMVRPPRIDVLALAAGTLEGLLFPSQRVDVGMTLIGVEELVEVREHWHG
Ga0209481_105192021	3300027880	Populus Rhizosphere	MGEVIEGALATVTPVPFTAGSIVILPPRIHIPALAPGTLEGTIFPPQRMDVGPTLVDVEGLVDV
Ga0308199_11210292	3300031094	Soil	MSVGEVMKGAVAAVAPVAFAPGSVVVRAPRIDILALTPGTLERPIFPPQRMEGGLTLADVAEVVDV
Ga0308194_103657441	3300031421	Soil	MGEVVEGAFAAIAPGAFTPGSIVIRPPRIDVLALAPGTLERAFFPPERMDVGLTLFGVEELVNV
Ga0310913_106122262	3300031945	Soil	MSEVVEGALAAVTPVPFTPGSIVVIPPRIDVLALAPGTLEGAIFPPQRMDVDLAGFYTEQLETVARVPGCP
Ga0310903_102558362	3300032000	Soil	VEQGIGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDIGLTLG
Ga0310890_103286081	3300032075	Soil	VEQGIGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDVSLTLVDVEELVDI
Ga0307471_1031395612	3300032180	Hardwood Forest Soil	ETQQKRRQNPVRQRPLALMHHRIGEIVESALAAVAPGAFAPRSVVVRPPRIDVLALAAGTLEGLLFPSQRVDVGMTLIGVEELVEVREHWHG
Ga0307472_1001225501	3300032205	Hardwood Forest Soil	TPVEQGRGEVVEGALAAVTPGAFTPGAIVVRPPRIDVLTLAPGTLERPIFPPQRMDVGLTLVDIEELVKV
Ga0306920_1028747852	3300032261	Soil	EIVEGALAAITPVALTPGAIVVRPPGIDVVTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI