Basic Information | |
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Family ID | F078426 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 116 |
Average Sequence Length | 49 residues |
Representative Sequence | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Number of Associated Samples | 58 |
Number of Associated Scaffolds | 116 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 29.57 % |
% of genes near scaffold ends (potentially truncated) | 34.48 % |
% of genes from short scaffolds (< 2000 bps) | 80.17 % |
Associated GOLD sequencing projects | 49 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (80.172 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (24.138 % of family members) |
Environment Ontology (ENVO) | Unclassified (61.207 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (60.345 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 69.39% β-sheet: 0.00% Coil/Unstructured: 30.61% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Lake Meromictic Pond Marine Sediment Deep Subsurface Seawater Aqueous Seawater Freshwater To Marine Saline Gradient Pelagic Marine Pelagic Marine Seawater Saline Water And Sediment Hypersaline Lake Sediment Soil |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI20154J14316_101592591 | 3300001348 | Pelagic Marine | EMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGRF* |
Ga0074649_10113153 | 3300005613 | Saline Water And Sediment | MKKTKEEIQEMGVHSERDYYSAFTVICCGLGAGACIALSLIVEYLTGMF* |
Ga0074649_10399473 | 3300005613 | Saline Water And Sediment | MKKTKEEIQEMGVYSERDYYSAFTVICCGLGAGACIALSLIVEYLTGNF* |
Ga0070749_100171092 | 3300006802 | Aqueous | MKKTKEELEEMGIYSERNWYSAVTVLCCGLGAGVCIALSLLVEYLTGRF* |
Ga0070749_102749464 | 3300006802 | Aqueous | KKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0070749_105048342 | 3300006802 | Aqueous | MKKTEKELEEMGIYSERNYYSAVTVLFCGLGAGVCIALSLLVEYLAGRF* |
Ga0070750_100859834 | 3300006916 | Aqueous | MKKTKEELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF* |
Ga0070750_101808091 | 3300006916 | Aqueous | EELDEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRL* |
Ga0070746_102058433 | 3300006919 | Aqueous | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0070745_12903581 | 3300007344 | Aqueous | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAG |
Ga0099851_11308431 | 3300007538 | Aqueous | EEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0099851_12397334 | 3300007538 | Aqueous | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYL |
Ga0099849_10445086 | 3300007539 | Aqueous | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF* |
Ga0099849_10891213 | 3300007539 | Aqueous | MKKTEKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF* |
Ga0099849_11365772 | 3300007539 | Aqueous | MGNIPHKQTKKGHMKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0099849_11516893 | 3300007539 | Aqueous | MKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0099849_11900052 | 3300007539 | Aqueous | MKKTKEELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0099849_12022621 | 3300007539 | Aqueous | MKKTEKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0099849_13287752 | 3300007539 | Aqueous | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0099849_13504982 | 3300007539 | Aqueous | MKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVYIALSLLVEYLTGRF* |
Ga0099847_10981762 | 3300007540 | Aqueous | MKKTKEEIEEMGVYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0115550_10230107 | 3300009076 | Pelagic Marine | MKKTEKELEEMGIYSERNYYSAVTVLCCALGAGVCIALSLIVEYLTGRF* |
Ga0115550_10413931 | 3300009076 | Pelagic Marine | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGKF* |
Ga0115550_10445512 | 3300009076 | Pelagic Marine | MKKTEKELEEMGIYSERNYYSAFTVLCCALGAGVCIAISLIVEYLTGRF* |
Ga0115550_10704014 | 3300009076 | Pelagic Marine | MKKTKEEIEEMGIYSERNYYSAVTVLCCALGAGVCIALSLLVEYLTGRF* |
Ga0115550_10987593 | 3300009076 | Pelagic Marine | MKKTGKELEEMGIYNERNYYSAVTALCCGLGAGVCIALSLLV |
Ga0114918_102267661 | 3300009149 | Deep Subsurface | MKKTKEEIEEMGIYSEGDYHSAVTVLCCALGAGVCIALSLIVEYLTGKF* |
Ga0114918_102479953 | 3300009149 | Deep Subsurface | MKKTEKEIQEMGVHSEREYYSAFTVLCCALGAGVCIALSLIVEYLKGKF* |
Ga0114918_104806391 | 3300009149 | Deep Subsurface | MIRKENRMKKTEKELEEMGIYSERNYYSAFTVLCCGLGAGVCIALSLLVEYLTGKF* |
Ga0114918_105042704 | 3300009149 | Deep Subsurface | ENRMKKTEKELEEMGIYSERNYYSAFTVICCALGAGVCIALSLIVEYLAGKF* |
Ga0114918_106968471 | 3300009149 | Deep Subsurface | MKKTKEEIEEMGIYSERNYHSAVTVLCCGLGAGVCI |
Ga0115562_10351541 | 3300009434 | Pelagic Marine | MAILPQNNKPPTMARKGKHRMKKTEKEIQEMGVHSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGKF* |
Ga0115562_10628665 | 3300009434 | Pelagic Marine | MKKTKEEIEEMGIYSERNYYSAFTVLCCALGAGVCIALSLIVEYLTGKF* |
Ga0115561_10170132 | 3300009440 | Pelagic Marine | MAILPQNNKPPTMARKGKHRMKKTEKEIQEMGVHSEREYYSAVTVICCALGAGACIALSLIVEYLTGKF* |
Ga0115561_13392533 | 3300009440 | Pelagic Marine | KKTKEEIQEMGIYSERNYYSAVTVICCALGAGVCIALSLIVEYLTGKF* |
Ga0115561_13629432 | 3300009440 | Pelagic Marine | MKKTKEEIQEMGVHSEREYYSAVTVLCCGLGAGVCIALSLIVEYLTGKF* |
Ga0115560_10683242 | 3300009447 | Pelagic Marine | MKKTKEEIQEMGIYSERNYYSAVTVICCALGAGVCIALSLIVEYLTGKF* |
Ga0130032_10366471 | 3300009860 | Meromictic Pond | KGTNHMKKTQKELDEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0129348_12344561 | 3300010296 | Freshwater To Marine Saline Gradient | KLRKAYHMKKTEKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0129348_13206041 | 3300010296 | Freshwater To Marine Saline Gradient | MKKTEKELEEMGIYSERNYYSAVTVLRCGLGAGVCIALSLLVE |
Ga0129345_10389776 | 3300010297 | Freshwater To Marine Saline Gradient | MKKTKEEIEEMGIYGERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0129345_11207442 | 3300010297 | Freshwater To Marine Saline Gradient | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVDYLAGRF* |
Ga0129345_12073253 | 3300010297 | Freshwater To Marine Saline Gradient | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCI |
Ga0129345_13202841 | 3300010297 | Freshwater To Marine Saline Gradient | AYHMKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0129345_13302402 | 3300010297 | Freshwater To Marine Saline Gradient | MKKTKEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRL* |
Ga0129342_10283062 | 3300010299 | Freshwater To Marine Saline Gradient | MKKTEKEIEEMGIHSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF* |
Ga0129342_11149513 | 3300010299 | Freshwater To Marine Saline Gradient | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVDYLAGRF* |
Ga0129351_11028311 | 3300010300 | Freshwater To Marine Saline Gradient | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGR |
Ga0136656_11751421 | 3300010318 | Freshwater To Marine Saline Gradient | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEY |
Ga0136656_13040431 | 3300010318 | Freshwater To Marine Saline Gradient | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIAL |
Ga0180437_107683023 | 3300017963 | Hypersaline Lake Sediment | MKKTKEELEEMGIDSERNYYSAVTVLCCGLGAGVCITLSLLVEYLTGRF |
Ga0180431_104889133 | 3300017987 | Hypersaline Lake Sediment | MKKTKEELDEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0180432_103150214 | 3300017989 | Hypersaline Lake Sediment | GHLNVKKGHMKKTKEELDEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0180434_107540273 | 3300017991 | Hypersaline Lake Sediment | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0188851_10059851 | 3300018682 | Freshwater Lake | MKKTEKEIQEMGVHSEREYYSAFTVICCALGAGVCIALSLLVEYLAGKF |
Ga0188851_10066485 | 3300018682 | Freshwater Lake | MKKTEKEIQEMGVHSEREYYSAFTVLCCGLGAGVCIALSLLVEYLTGKF |
Ga0213868_100144428 | 3300021389 | Seawater | MKKTEKEIEEMGIHSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0196905_11081353 | 3300022198 | Aqueous | YSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0196901_12576653 | 3300022200 | Aqueous | MKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVC |
(restricted) Ga0233411_101234033 | 3300023112 | Seawater | MKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0228636_100113413 | 3300024191 | Seawater | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGRF |
Ga0210003_10757763 | 3300024262 | Deep Subsurface | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGKF |
(restricted) Ga0255049_104691783 | 3300024517 | Seawater | EMGIYNERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
(restricted) Ga0255048_106294033 | 3300024518 | Seawater | GNKQMKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
(restricted) Ga0255047_103703283 | 3300024520 | Seawater | GIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0208303_10230955 | 3300025543 | Aqueous | MKKTKEEIEEMGVYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0209405_10260087 | 3300025620 | Pelagic Marine | MAILPQNNKPPTMARKGKHRMKKTEKEIQEMGVHSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGKF |
Ga0209504_10085845 | 3300025621 | Pelagic Marine | MKKTEKELEEMGIYSERNYYSAVTVLCCALGAGVCIALSLIVEYLTGRF |
Ga0209504_10136834 | 3300025621 | Pelagic Marine | MKKTKEEIQEMGIYSERNYYSAVTVICCALGAGVCIALSLIVEYLTGKF |
Ga0209504_10154265 | 3300025621 | Pelagic Marine | MKKTEKELEEMGIYSERNYYSAFTVLCCALGAGVCIAISLIVEYLTGRF |
Ga0209504_10870412 | 3300025621 | Pelagic Marine | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGKF |
Ga0209197_10157748 | 3300025637 | Pelagic Marine | MARKGKHRMKKTEKEIQEMGVHSEREYYSAVTVICCALGAGACIALSLIVEYLTGKF |
Ga0208161_11235691 | 3300025646 | Aqueous | MKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF |
Ga0208162_10477822 | 3300025674 | Aqueous | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0208162_10505975 | 3300025674 | Aqueous | MKKTKEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF |
Ga0208162_10704053 | 3300025674 | Aqueous | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF |
Ga0208162_10806753 | 3300025674 | Aqueous | MKKTEKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0208162_11313153 | 3300025674 | Aqueous | MGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF |
Ga0209603_12069291 | 3300025849 | Pelagic Marine | NNKPTIRYMKKTEKELEEMGIYSERNYYSAVTVICCALGAGVCIALSLIVEYLTGKF |
Ga0209119_10383292 | 3300025860 | Pelagic Marine | MARKGKHRMKKTEKEIQEMGVHSEREYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0209533_10707674 | 3300025874 | Pelagic Marine | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGRF |
Ga0209533_11384603 | 3300025874 | Pelagic Marine | KKTKEEIQEMGIYSERNYYSAVTVICCALGAGVCIALSLIVEYLTGKF |
Ga0208644_102348411 | 3300025889 | Aqueous | MKKTKEELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGRF |
Ga0228644_10009019 | 3300026453 | Seawater | MKKTKEEIEEIGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGRF |
Ga0228604_11021441 | 3300026506 | Seawater | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTVRF |
(restricted) Ga0255041_100603623 | 3300027837 | Seawater | MKKTEKELEEMGIYSERNYYSAMTVLCCGLGAGVCIALSLLVEYLAGRF |
(restricted) Ga0233415_104048141 | 3300027861 | Seawater | MKKTKEELEEMGIYSERNYYSAMTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0209536_1014560291 | 3300027917 | Marine Sediment | MKKTEKEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLL |
(restricted) Ga0233413_102002761 | 3300027996 | Seawater | MKKTEKELEEMGIYSERNYYSAMTVLCCGLGAGVCIALSLLVE |
Ga0228640_11072462 | 3300028273 | Seawater | MKKTKEEIEEIGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGR |
Ga0228646_10482822 | 3300028280 | Seawater | MKKTKEELDAMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0307380_101754524 | 3300031539 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVICCGLGAGVCIALSLIVEYLTGKF |
Ga0307380_101931993 | 3300031539 | Soil | MKKTEKELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGKF |
Ga0307380_104168984 | 3300031539 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVICCALGAGVCIALSLIVEYL |
Ga0307379_104432812 | 3300031565 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVLCCGLGAGVCIALSLLVEYLAGRF |
Ga0307379_116362362 | 3300031565 | Soil | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGACIAISLIVEYLT |
Ga0307378_101713682 | 3300031566 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVICCALGAGVCIALSLIVEYLTGRF |
Ga0307378_102229212 | 3300031566 | Soil | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEFLTGSF |
Ga0307378_104357693 | 3300031566 | Soil | MKKTKEEIEEMGIYSERNYYSAFTVLCCGLGAGVCIALSLLVEYLTGKF |
Ga0307378_111911963 | 3300031566 | Soil | MKKTEKELEEMGNYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGKF |
Ga0307376_100849145 | 3300031578 | Soil | MKKTEKEIEEMGVHSEREYYSAFTVLCCGLGAGVCIALSLIVEYLTG |
Ga0307376_101005303 | 3300031578 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVICCALGAGVCIALSLLVEYLTGKF |
Ga0307376_101114933 | 3300031578 | Soil | MKKTKEELEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGKF |
Ga0307376_102652753 | 3300031578 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVICCALGAGVCIALSLIVEYLTGKF |
Ga0307376_102799033 | 3300031578 | Soil | MKKTEKELEEMGIYSERNYYSAFTVLCCGLGAGVCIALSLLVEYLAGKF |
Ga0307376_104469313 | 3300031578 | Soil | MVNKGKNVARKENKMKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGKF |
Ga0307376_104511562 | 3300031578 | Soil | MKKTKEEIEEMGIYSERNYYSAVTVLCCGLGAGVCIALSLIVEYLTGKF |
Ga0307376_107653672 | 3300031578 | Soil | MKKTKEEIEEMGIYSERNYYSAFTVLCCGLGAGVCIALSLIVEYLTGKF |
Ga0307376_108300612 | 3300031578 | Soil | MKKTKEELEEMGIYSQRNYYSAFTVLCCGLGAGVCIALSLLVEYLTGRF |
Ga0307376_108634242 | 3300031578 | Soil | MKKTKEEIQEMGVHSEREYYSAFTVICCALGAGVCIALSLIVEYLTGKF |
Ga0307376_109085072 | 3300031578 | Soil | MKKTEKEIQEMGVHSEREYYSAVTVLCCALGAGVCIALSLIVEYLTGKF |
Ga0307375_102850431 | 3300031669 | Soil | MKKTEKEIQEMGIYSERNYYSAVTVLCCGLGAGVCIALSLLVEYLTGKF |
Ga0307375_106323193 | 3300031669 | Soil | MKKTEKELEEMGIYSERNYYSAVTVLCCALGAGVCIAL |
Ga0307377_101090591 | 3300031673 | Soil | MKKTEKELEEMGIYSERNYYSAFTVLCCGLGAGVCIA |
Ga0307377_101735681 | 3300031673 | Soil | MKKTKEEIEEMGIYSERNYYSAFTVLCCGLGAGVCIALSLLVEYLTG |
Ga0307377_110846492 | 3300031673 | Soil | MKKTEKEIQEMGVHSEREYYSAFTVLCCGLGAGVCIALSLIVEYLTGKF |
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