Metagenome / Metatranscriptome Family F078418

Basic Information
Family ID	F078418
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	62 residues
Representative Sequence	MNTEQLESINLMTYKQLKNTLYTLRCRLSEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Number of Associated Samples	79
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.21 %
% of genes near scaffold ends (potentially truncated)	43.97 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (79.310 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (48.276 % of family members)
Environment Ontology (ENVO)	Unclassified (48.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.379 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100 1Ga0075474_100281328 2Ga0070749_101278253 3Ga0070749_101678345 4Ga0070749_103783741 5Ga0070754_101934363 6Ga0070754_103294643 7Ga0075481_101865663 8Ga0075475_102022671 9Ga0070750_101799972 10Ga0070750_102335974 11Ga0070750_102896491 12Ga0070746_102254483 13Ga0075463_100670624 14Ga0070745_10805852 15Ga0070745_10882632 16Ga0070745_11425513 17Ga0070753_13617292 18Ga0099849_11495091 19Ga0099849_11607314 20Ga0099849_13454002 21Ga0099848_10564553 22Ga0099848_11107732 23Ga0070751_13677582 24Ga0075480_100640061 25Ga0102960_12981672 26Ga0102963_10444275 27Ga0102963_14104302 28Ga0118687_104293851 29Ga0115551_14085742 30Ga0114919_105847803 31Ga0136656_12546232 32Ga0182096_10385803 33Ga0182053_14209273 34Ga0181552_100557563 35Ga0181552_100856301 36Ga0181552_101169533 37Ga0181552_101995982 38Ga0181552_102926443 39Ga0181552_103649252 40Ga0181584_105677962 41Ga0181607_105244061 42Ga0181607_105482282 43Ga0181577_105099062 44Ga0181581_102328633 45Ga0181581_103718712 46Ga0181590_102495442 47Ga0181590_110800792 48Ga0181587_108822082 49Ga0181600_102304913 50Ga0181579_106257632 51Ga0181601_106898471 52Ga0181606_104679221 53Ga0181606_106677411 54Ga0181606_107110822 55Ga0181561_105589511 56Ga0181560_100793881 57Ga0181560_102581843 58Ga0181560_103372372 59Ga0181560_105008341 60Ga0181559_106863591 61Ga0181559_106933942 62Ga0181553_104267511 63Ga0181553_105344392 64Ga0181558_100911631 65Ga0181558_106497032 66Ga0181563_105420902 67Ga0181591_110837983 68Ga0181564_107153342 69Ga0181562_100811924 70Ga0181555_11814452 71Ga0181554_11796402 72Ga0181602_100460896 73Ga0181603_102910522 74Ga0181596_103285722 75Ga0181599_11106823 76Ga0181604_104951361 77Ga0213859_100241257 78Ga0213863_101381421 79Ga0213865_104154452 80Ga0213864_104904842 81Ga0213866_100356336 82Ga0213866_101398225 83Ga0222718_100927534 84Ga0222719_1000097029 85Ga0222719_103884181 86Ga0196883_10375302 87Ga0212025_10120464 88Ga0196891_10711021 89Ga0196899_10258936 90Ga0196899_11245681 91Ga0224504_101523142 92Ga0224504_102445491 93Ga0255756_10747171 94Ga0255765_13462851 95Ga0255779_12883151 96Ga0255779_13375092 97Ga0255773_101633993 98Ga0255773_102199981 99Ga0255773_102833732 100Ga0255758_102407863 101Ga0255752_103961352 102Ga0255772_104771252 103Ga0208162_11515811 104Ga0208162_11949101 105Ga0208917_10360905 106Ga0208917_11254391 107Ga0208645_12220781 108Ga0208644_11398441 109Ga0208644_13081112 110Ga0209630_102592342 111Ga0209951_10023042 112Ga0209929_10630981 113Ga0209536_1002169582 114Ga0233450_103019091 115Ga0307488_108276261 116Ga0316203_10744652
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100 1Ga0075474_100281328 2Ga0070749_101278253 3Ga0070754_103294643 4Ga0070746_102254483 5Ga0118687_104293851 6Ga0115551_14085742 7Ga0181553_104267511 8Ga0209929_10630981 9Ga0316203_10744652
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100 1Ga0075474_100281328 2Ga0070749_101278253 3Ga0070754_103294643 4Ga0070746_102254483 5Ga0118687_104293851 6Ga0115551_14085742 7Ga0181553_104267511 8Ga0209929_10630981 9Ga0316203_10744652
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.33% β-sheet: 0.00% Coil/Unstructured: 11.67%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00535	Glycos_transf_2	0.86

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	20.69 %
Unclassified	root	N/A	79.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	4.31 %
Unclassified	root	N/A	79.31 %
Viruses	superkingdom	All Organisms → Viruses	16.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.38 %
Unclassified	root	N/A	79.31 %

Scaffold	Taxonomy	Length	IMG/M Link
3300006025\|Ga0075474_10028132	All Organisms → Viruses → Predicted Viral	1994	Open in IMG/M
3300006802\|Ga0070749_10127825	All Organisms → Viruses → Predicted Viral	1489	Open in IMG/M
3300006802\|Ga0070749_10167834	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300006802\|Ga0070749_10378374	Not Available	784	Open in IMG/M
3300006810\|Ga0070754_10193436	Not Available	951	Open in IMG/M
3300006810\|Ga0070754_10329464	Not Available	679	Open in IMG/M
3300006868\|Ga0075481_10186566	Not Available	746	Open in IMG/M
3300006874\|Ga0075475_10202267	Not Available	850	Open in IMG/M
3300006916\|Ga0070750_10179997	Not Available	945	Open in IMG/M
3300006916\|Ga0070750_10233597	Not Available	803	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	94.83%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.31%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	38.79%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	48.28%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.86%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.72%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.86%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.31%
Sediment	Environmental → Aquatic → Marine → Sediment	1.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	48.28%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.72%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	37.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	31.03%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.86%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.59%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.86%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.86%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.86%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.86%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.86%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	4.31%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.86%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	48.28%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.17%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.72%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.86%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075474_100281328	3300006025	Aqueous	METEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0070749_101278253	3300006802	Aqueous	MNAEELEINNRTVFRQTKNMLYALRCKLSEAQQTPDEYAQCYVNELKQAIISLEAVKKYF
Ga0070749_101678345	3300006802	Aqueous	MKTEEFETLDQSTYRQLKNMLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0070749_103783741	3300006802	Aqueous	MNAEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0070754_101934363	3300006810	Aqueous	MNTEQLETINQTTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0070754_103294643	3300006810	Aqueous	MNIKIYNYESAQLESVDETAYRQIKNTLYALRCKLSAAQQAPDEYAQCYVNELQQAIISLDAVKKYF*
Ga0075481_101865663	3300006868	Aqueous	MNIKIYNYESAQLESVDETAYRQIKNTLYALRCKLSAAQQAPDEYAQCYVNELQQAIIS
Ga0075475_102022671	3300006874	Aqueous	LRNRIGVIIMETEQLESINLMTYKQLKNTLYTLHNRLAETQKAPDGYAQCYVNELKQAIISLEAVKKYF*
Ga0070750_101799972	3300006916	Aqueous	MNAEELEINNRTVFRQTKNMLYALRCKLSEAQQTPDEYAQCYVNELQQAIISLDAVKKYF
Ga0070750_102335974	3300006916	Aqueous	INLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF*
Ga0070750_102896491	3300006916	Aqueous	MNTEQLETINQTTYRQLKNTLYTLRCRLAEAQQTPDEYAQCYVNELKQAIISLEAVKKYF
Ga0070746_102254483	3300006919	Aqueous	ATKQNTPISTPTEPHRSNLMNAEQLEINNRTVFRQTKNMLYALRCKLSEAQQTPDEYAQCYVNELKQAIISLEAVKKYF*
Ga0075463_100670624	3300007236	Aqueous	METEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIIS
Ga0070745_10805852	3300007344	Aqueous	METEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISIEAVKKYF
Ga0070745_10882632	3300007344	Aqueous	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELQQAINSLEAVKKYF
Ga0070745_11425513	3300007344	Aqueous	MNAEQLEINNRTVFRQTKNMLYALRCKLSEAQQTPDEYAQCYVNELKQAIISLEAVKKYF
Ga0070753_13617292	3300007346	Aqueous	MRTEQPEISDRTIFRQIKNTLYTLRCKLSEAQQAPDEYAQCYVNELKQAIINLDAVKKYF
Ga0099849_11495091	3300007539	Aqueous	RIGVIIMETEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF*
Ga0099849_11607314	3300007539	Aqueous	FQHLRNRIGVNNMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF*
Ga0099849_13454002	3300007539	Aqueous	MNIKIYNYESAQLETVDETTYRQLKNTLYTLRCRLSEAQKAPDEYAQCYVNELQQAIISLDAVKKYF*
Ga0099848_10564553	3300007541	Aqueous	MKTEQLESINLMTYKQLKNTLYTLRCRLAEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0099848_11107732	3300007541	Aqueous	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELKQAIIRLEAVKKYF
Ga0070751_13677582	3300007640	Aqueous	METEQLESINLMTYKQLKNTLYTLRNRLAEAQQAPDGYAQCYVNELKQAIISLEAVKKYF
Ga0075480_100640061	3300008012	Aqueous	TEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF*
Ga0102960_12981672	3300009000	Pond Water	MNIKIYNYESAQLESVNETTYRQLKNTLYTLRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF*
Ga0102963_10444275	3300009001	Pond Water	MNTEQLETINQTTYRQIINTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIINLDAVKK
Ga0102963_14104302	3300009001	Pond Water	MNAEQLETINQTTYRQIKNTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIINLDAVKK
Ga0118687_104293851	3300009124	Sediment	MNAEQIEKSNLTTYRQIQNTLYTLRCKLAEAQKAPDEYAQCYVNELMQAIIRLDAV
Ga0115551_14085742	3300009193	Pelagic Marine	MKTYNPESEQLENDNQTTYRQLKNTLYTLRCRLSEAQQVPDAYAQCYVNELQQAIISLEAVIKYY*
Ga0114919_105847803	3300009529	Deep Subsurface	MNTEQLETINQTTYRQLKNTLYTLRNRLAEVQKAPDEYAQCYVNELKQAIISLDAVKKYF
Ga0136656_12546232	3300010318	Freshwater To Marine Saline Gradient	MKTEQLESINLMTYKQLKNTLYTLRNRLAEAQQAPDGYAQCYVNELKQAIISLEAVKKYF
Ga0182096_10385803	3300016740	Salt Marsh	MTTEQLESINLMTYKQLKNTLYTLRCRLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0182053_14209273	3300016749	Salt Marsh	MTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181552_100557563	3300017824	Salt Marsh	MKTEQLESINLMTYKQLKNTLYTLRCRLAEAQKTPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181552_100856301	3300017824	Salt Marsh	MNTEQLETINQTTYRQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181552_101169533	3300017824	Salt Marsh	MKTEQLESINLMTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181552_101995982	3300017824	Salt Marsh	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181552_102926443	3300017824	Salt Marsh	MTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181552_103649252	3300017824	Salt Marsh	MKTYNPESEQLETINQTTYRQLKNTLYTLRCRLAEAQKTPDEYAHCYVNELQQAIISLDAIKKYF
Ga0181584_105677962	3300017949	Salt Marsh	MRTEQLEISDRTIFRQIKNTLYTLRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181607_105244061	3300017950	Salt Marsh	QLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181607_105482282	3300017950	Salt Marsh	FQHLRNRIGIIMKTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181577_105099062	3300017951	Salt Marsh	QHLRNRIGIIMNTEQLESINLMTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181581_102328633	3300017962	Salt Marsh	MTTEQLESINLMTYKQLKNTLYTLRCRLAEAQKTPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181581_103718712	3300017962	Salt Marsh	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181590_102495442	3300017967	Salt Marsh	MRTEQLEISDRTIFRQIKNTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIINLDAVKKYF
Ga0181590_110800792	3300017967	Salt Marsh	MNTEQLETINQTTYRQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181587_108822082	3300017968	Salt Marsh	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181600_102304913	3300018036	Salt Marsh	NNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181579_106257632	3300018039	Salt Marsh	SNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181601_106898471	3300018041	Salt Marsh	MNTEQLESINLMTYKQLKNTLYTLRCRLSEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181606_104679221	3300018048	Salt Marsh	NLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181606_106677411	3300018048	Salt Marsh	MNTEQLESINLMTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181606_107110822	3300018048	Salt Marsh	YLSSAMKQNTPISTPTEPHRSNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181561_105589511	3300018410	Salt Marsh	INLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181560_100793881	3300018413	Salt Marsh	MKTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181560_102581843	3300018413	Salt Marsh	TEQLESINLMTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181560_103372372	3300018413	Salt Marsh	EQLESINLMTYKQLKNTLYTLRCRLAEAQKTPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181560_105008341	3300018413	Salt Marsh	PTEPHRSNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181559_106863591	3300018415	Salt Marsh	INNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181559_106933942	3300018415	Salt Marsh	MTTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181553_104267511	3300018416	Salt Marsh	KTRIFQHLRNRIGIIMKTEQLESINLMTYKQLKNTLYTLRTRLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181553_105344392	3300018416	Salt Marsh	MKQNTPISTPTEPHRSNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181558_100911631	3300018417	Salt Marsh	RLFQHLRNRIGIIMKTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181558_106497032	3300018417	Salt Marsh	MTTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181563_105420902	3300018420	Salt Marsh	SSIYRARXSKTRLFQHLRNRIGIIMNTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181591_110837983	3300018424	Salt Marsh	MKTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181564_107153342	3300018876	Salt Marsh	MNSEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181562_100811924	3300019459	Salt Marsh	MNTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181555_11814452	3300020051	Salt Marsh	QLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181554_11796402	3300020052	Salt Marsh	MNTEQLESINLMTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0181602_100460896	3300020173	Salt Marsh	MTTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0181603_102910522	3300020174	Salt Marsh	MNSEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181596_103285722	3300020177	Salt Marsh	AMKQNTPISTPTEPHRSNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181599_11106823	3300020178	Salt Marsh	KQNTPISTPTEPHRSNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0181604_104951361	3300020191	Salt Marsh	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKK
Ga0213859_100241257	3300021364	Seawater	QSTYRQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0213863_101381421	3300021371	Seawater	MNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0213865_104154452	3300021373	Seawater	MNIKIYNYESGQLETVNETTYRQLKNTLYTLRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0213864_104904842	3300021379	Seawater	MKTEEFETLDQTTYRQLKNMLYTLRCRLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0213866_100356336	3300021425	Seawater	MKTEEFETLDQSTYRQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0213866_101398225	3300021425	Seawater	MKTEEFETLDQSTYRQLKNMLYTLRCRLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0222718_100927534	3300021958	Estuarine Water	MNAEQLETINQTTYRQIINTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIINLDAVKKYF
Ga0222719_1000097029	3300021964	Estuarine Water	MNTEQLETINQTTYRQIINTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIINLDAVKKYF
Ga0222719_103884181	3300021964	Estuarine Water	MKQNTPISTPTEPHRSNLMNAEQIEKSNLTTYRQIQNTLYTLRCKLAEAQKTPDEYAQCYVNELQQAIIRLDAVKIYF
Ga0196883_10375302	3300022050	Aqueous	METEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYINELKQAIISLEAVKKYF
Ga0212025_10120464	3300022057	Aqueous	ESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYINELKQAIISLEAVKKYF
Ga0196891_10711021	3300022183	Aqueous	GVNNMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0196899_10258936	3300022187	Aqueous	METEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYINELKQAIISLEAVKK
Ga0196899_11245681	3300022187	Aqueous	MNAEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0224504_101523142	3300022308	Sediment	MNAEQLETINQTTYRQIKNTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIINLDAVKKYF
Ga0224504_102445491	3300022308	Sediment	MNAEQLESINLTTYKQLKNTLYTLRCRLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0255756_10747171	3300022905	Salt Marsh	MKTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0255765_13462851	3300022921	Salt Marsh	ISTPTEPHRNNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0255779_12883151	3300022922	Salt Marsh	MNTEQLESINLMTYKQLKNTLYTLRCRLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0255779_13375092	3300022922	Salt Marsh	MKQNTPISTPTEPHRSNLMTTEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0255773_101633993	3300022925	Salt Marsh	ESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0255773_102199981	3300022925	Salt Marsh	TPTEPHRSNLMNTEQLEINNRTVFRQTKNMLYALRCKLSEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0255773_102833732	3300022925	Salt Marsh	RIGIIMKTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0255758_102407863	3300022928	Salt Marsh	TYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0255752_103961352	3300022929	Salt Marsh	MNTEQLESINLMTYKQLKNTLYTLRCRLAEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0255772_104771252	3300023176	Salt Marsh	MKTEQLETINQMTYRQLKNTLYTLRNRLAEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0208162_11515811	3300025674	Aqueous	MNIKIYNYESAQLETVDETTYRQLKNTLYTLRCRLSEAQKAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0208162_11949101	3300025674	Aqueous	EQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0208917_10360905	3300025840	Aqueous	MNIKIYNYESAQLESVDETAYRQIKNTLYALRCKLSAAQQAPDEYAQCYVNELQQAIISLDAVKKYF
Ga0208917_11254391	3300025840	Aqueous	MNAEQLEINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELKQAIISLEA
Ga0208645_12220781	3300025853	Aqueous	RNRIGVIIMKTEQLESINLMTYKQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0208644_11398441	3300025889	Aqueous	MNTEQLETINQTTYRQLKNTLYTLRCRLAEAQQTPDEYAQCYVNELKQAIISLEAV
Ga0208644_13081112	3300025889	Aqueous	SNATKQNTPISTPTEPHRSNLMNAEQLEINNRTVFRQTKNMLYALRCKLSEAQQTPDEYAQCYVNELKQAIISLEAVKKYF
Ga0209630_102592342	3300025892	Pelagic Marine	MKTYNPESEQLENDNQTTYRQLKNTLYTLRCRLSEAQQVPDAYAQCYVNELQQAIISLEAVIKYY
Ga0209951_10023042	3300026138	Pond Water	MNAEQLETINQTTYRQLKNTLYTLRNRLAEAQKAPDEYAQCYVNELQQAIINLDAVKKYF
Ga0209929_10630981	3300026187	Pond Water	RLFQHLRNRIGVIMNIKIYNYESAQLESVNETTYRQLKNTLYTLRCKLSEAQKAPDEYAQCYVNELKQAIISLEAVKKYF
Ga0209536_1002169582	3300027917	Marine Sediment	MRTEQLEISDRTIFRQIKNTLYTLRCKLSEAQQAPDEYAQCYVNELQQAIANLDAVKKYF
Ga0233450_103019091	3300028115	Salt Marsh	NRIGIIMNTEQLESINLMTYKQLKNTLYTLRCRLSEAQQAPDEYAQCYVNELQQAIISLEAVKKYF
Ga0307488_108276261	3300031519	Sackhole Brine	EINNRTVFRQTKNMLYALRCKLSEAQQAPDEYAQCYVNELQQAINSLEAVKKYF
Ga0316203_10744652	3300032274	Microbial Mat	MKTYNPESEEWILWTTKPPNRHLKNTLYTLRCRLSEAQQVPDAYAQCYVNELQQAIISLEAVIKYY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078418

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences