NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F078348

Metagenome / Metatranscriptome Family F078348

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078348
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 95 residues
Representative Sequence MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Number of Associated Samples 97
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.14 %
% of genes near scaffold ends (potentially truncated) 36.21 %
% of genes from short scaffolds (< 2000 bps) 94.83 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (68.966 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.862 % of family members)
Environment Ontology (ENVO) Unclassified
(29.310 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.724 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124
1ARSoilOldRDRAFT_0110182
2JGI25406J46586_102240911
3soilH2_100161782
4Ga0066675_104360181
5Ga0065704_102732051
6Ga0065705_101226583
7Ga0066388_1031971522
8Ga0070668_1020474512
9Ga0070708_1005440672
10Ga0066698_107977361
11Ga0066654_100918362
12Ga0066903_1019757232
13Ga0066903_1057514632
14Ga0081538_100980902
15Ga0075421_1014328171
16Ga0075421_1016309502
17Ga0075430_1004680952
18Ga0075425_1021530872
19Ga0075419_105319651
20Ga0079218_109116722
21Ga0075435_1017105082
22Ga0099791_101575562
23Ga0105679_105414342
24Ga0099829_102029381
25Ga0099829_104254773
26Ga0099830_102719662
27Ga0099828_102642953
28Ga0099827_102356642
29Ga0099827_103446073
30Ga0075418_104125402
31Ga0075418_104169313
32Ga0075418_120381851
33Ga0066709_1030462731
34Ga0114129_108338111
35Ga0114129_117747542
36Ga0114129_130334832
37Ga0105092_101490763
38Ga0075423_107337601
39Ga0105249_128089101
40Ga0105067_11075351
41Ga0126310_110785731
42Ga0126382_108226362
43Ga0126370_108850832
44Ga0126370_125486721
45Ga0126376_105870971
46Ga0126376_113025921
47Ga0126378_116834161
48Ga0126377_108116591
49Ga0126377_111776382
50Ga0126379_108300482
51Ga0126383_125510261
52Ga0137391_104838942
53Ga0137393_103614731
54Ga0137388_104314371
55Ga0137388_111816092
56Ga0137383_105876281
57Ga0137365_111081692
58Ga0137374_108845392
59Ga0137377_115421631
60Ga0137377_117011032
61Ga0150985_1150950452
62Ga0137369_105548331
63Ga0137384_108650972
64Ga0137360_106333231
65Ga0137360_106497042
66Ga0137361_101174932
67Ga0137358_104361022
68Ga0137395_112135011
69Ga0137394_100489424
70Ga0137407_103512602
71Ga0137410_117752242
72Ga0126375_111118292
73Ga0163162_108536622
74Ga0182000_106709761
75Ga0137412_102299122
76Ga0182035_104331843
77Ga0182039_108753001
78Ga0184637_105533802
79Ga0184633_101213652
80Ga0184627_104353862
81Ga0190265_115470842
82Ga0190272_112658671
83Ga0190275_110725701
84Ga0190270_106642752
85Ga0187892_105691791
86Ga0212128_109561271
87Ga0209751_105820602
88Ga0207684_101429632
89Ga0214469_12242421
90Ga0209593_100109173
91Ga0209180_101438373
92Ga0209590_101844242
93Ga0209590_103914852
94Ga0209382_103060431
95Ga0209382_113826952
96Ga0209853_10580873
97Ga0299907_102174292
98Ga0299907_102941142
99Ga0302046_109686542
100Ga0308203_10971871
101Ga0308205_10360682
102Ga0308206_11677012
103Ga0308178_10897271
104Ga0308190_10952452
105Ga0308204_102023592
106Ga0308204_103098261
107Ga0308197_101626992
108Ga0308197_102429751
109Ga0308187_100709882
110Ga0299914_106887322
111Ga0306925_102470872
112Ga0307411_120887472
113Ga0306920_1040158891
114Ga0214472_100108793
115Ga0334913_103541_331_600
116Ga0370545_110154_372_608
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.03%    β-sheet: 0.00%    Coil/Unstructured: 70.97%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQVSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
69.0%31.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Thermal Springs
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Serpentine Soil
Switchgrass Rhizosphere
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Grasslands Soil
Sub-Biocrust Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Groundwater Sand
Soil
Bio-Ooze
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
15.5%25.9%9.5%3.4%12.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ARSoilOldRDRAFT_01101823300000044Arabidopsis RhizosphereMAKELKRIDISSIPELVKLAHEVQSTNEPSILQQEREDVAMLTPLKPVPKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
JGI25406J46586_1022409113300003203Tabebuia Heterophylla RhizosphereMNQIAKEPRHINVSSIPELLKLVQKVRQTNEPTILREESEDVAMLMPIKPVGKTRVRGKPVTADDPLWKLVGIGHSGKGDISENKHTYLARAYRPQ*
soilH2_1001617823300003324Sugarcane Root And Bulk SoilVPQRAKEPRHMDLSSIPELQKLVHEVRHTNEPSILREESEDVAMLTPLKPRAKRGGRGKPTTADDPLWKLVGVGHSATGDGSAN*
Ga0066675_1043601813300005187SoilMAKEPRHIDISSIPALQKLVHEVRQTNEPSILREESEDVAMLTPLKPGAKRSARGKPTTADDPLWKLVGIGHSGKGDVSENKHTYLAEASLPRREG*
Ga0065704_1027320513300005289Switchgrass RhizosphereNATTKEVNQMAKEPRHIDISSIPELVKLVHEVRQTNEPSILREESEDLAMLTPLKQVAKRSVRGTPTTADDPLWKLVGIGHSGKDDISANKHKYLAEAYLPHKQT*
Ga0065705_1012265833300005294Switchgrass RhizosphereMAKEPRHIDISSIPELVKLVHEVRQTNEPSILREESEDLAMLTPLKQVAKRSVRGTPTTADDPLWKLVGIGHSGKDDISANKHKYLAEAYLPHKQT*
Ga0066388_10319715223300005332Tropical Forest SoilMAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSEN
Ga0070668_10204745123300005347Switchgrass RhizosphereIDISSIPELLKLVQEVRQTNTPTILQQEREDVAMLIPMKPVDKTRVRGKPVTADDPLWKLVGIGNSGKGDISANKHTYLARAYRPR*
Ga0070708_10054406723300005445Corn, Switchgrass And Miscanthus RhizosphereMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAHR*
Ga0066698_1079773613300005558SoilMAKEPNRIDISSIPELLKLVHEVRQTNEPRILREESADVAMLTPLKPATKSSVRGKPTSADDPLWKLVGIGHSGKGDISANKHKYLACAYRPH*
Ga0066654_1009183623300005587SoilMAKEPRHIDISSIPALQKLVHEVRQTNEPSILREEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHQYLAEAYRPRREV*
Ga0066903_10197572323300005764Tropical Forest SoilMAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHTYLAEAYLPHKQV*
Ga0066903_10575146323300005764Tropical Forest SoilMAKEPNRIDISSIPELQKLVHEVRQTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVRADDPLWKLVGIGHSGKGDISANKHKYLAE
Ga0081538_1009809023300005981Tabebuia Heterophylla RhizosphereMAKEKELKRIDISDIPELLTLVQEVQRTNEPRILQQDHEDLVMLTPIKPVAKRKARGKPTTADDPLWKLIGIGRSGTGDVSENKHKYLAEAYLHHKRV*
Ga0075421_10143281713300006845Populus RhizosphereMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGARGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLTEAYLPRKQV*
Ga0075421_10163095023300006845Populus RhizosphereMAKEKAPKRIDIGSIPELVHLAQEVQRTNESAILQQESEDVAILTPIKPMAKKRSVRGKPTSADDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0075430_10046809523300006846Populus RhizosphereMAKEPRHIDISSIPELQKLVHEVRQTNEPAILREEREDVAKLTPIKSKAKRSVRGKPTSADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRREV*
Ga0075425_10215308723300006854Populus RhizospherePKRVDISGIPELLSIAQEVRQTNEPAILQQEREELAMLTPIKPVAKRRVRAKPTNADDPLWNLVGIGHSGKGDVSENKHKYLAEAYLPRKEV*
Ga0075419_1053196513300006969Populus RhizosphereMAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKRV*
Ga0079218_1091167223300007004Agricultural SoilIDISSIPELQKLVREVRQTNEPAILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQT*
Ga0075435_10171050823300007076Populus RhizosphereMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHHYLAEAYLRYKRE*
Ga0099791_1015755623300007255Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRSTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWQLAGIGHSGSGDISDNKHQYLAEAYLHHKQA*
Ga0105679_1054143423300007790SoilMAKEPRHIDISSIPELQKLVHEVRQTNEPSILREESEDVAMLSPLKPRAKRSAKGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKEV*
Ga0099829_1020293813300009038Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGD
Ga0099829_1042547733300009038Vadose Zone SoilVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWKLVGIGHSGRGDISENKHKYLTEAYLHHKQA*
Ga0099830_1027196623300009088Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKGSVRGKPTSVDDPLWKLVGIGHSGSGDISENKHKYLTEAYLHHKQT*
Ga0099828_1026429533300009089Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0099827_1023566423300009090Vadose Zone SoilMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRKQV*
Ga0099827_1034460733300009090Vadose Zone SoilMAKETKHIDVSSIPEVLKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0075418_1041254023300009100Populus RhizosphereVEEMAKEKAPKRIDIGSIPELVHLAQEVQRTNESAILQQESEDVAILTPIKPMAKKRSVRGKPTSADDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0075418_1041693133300009100Populus RhizosphereMAKERKRIDISSIPALVKLAHEVRSTNEPSILQQEREDVAMLAPLTPVPKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQV*
Ga0075418_1203818513300009100Populus RhizosphereGGVTQMAKEPRHIDISSIPELLKLVQEVRQTNELTILQQENEDVAMLTPLKPRAKRSARGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRREV*
Ga0066709_10304627313300009137Grasslands SoilGVKQMAKELKRIDISSSPELVKYAHEVRSTNEPSILQQEREDVAMLTPLKPITKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLADAYLPRKQV*
Ga0114129_1083381113300009147Populus RhizosphereMAKEPKQIDISSMPELVKLAQEVRSTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGNDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQT*
Ga0114129_1177475423300009147Populus RhizosphereMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHTYLAEAYLPRKQV*
Ga0114129_1303348323300009147Populus RhizosphereMAKEPRHIDISSIPELQKLVREVRQTNEPSILREESEDVAMLTPLKPVNKRSARGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPHKQV*
Ga0105092_1014907633300009157Freshwater SedimentMAKEKAPKRIDISRIPELLHLAQEVRSTNESRILQQESEELAMLTPITPVAKRSVRGKPTTADDPLWKLVGIGHSGKGDISANTHQYLADAYLHHKQA*
Ga0075423_1073376013300009162Populus RhizosphereKRITKGGGKQMAKERKRIDISSIPALVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQV*
Ga0105249_1280891013300009553Switchgrass RhizosphereISSIPELLKLVQEVRQTNTPTILQQEREDVAMLIPMKPVGKTRVRGKPVTADDPLWKLVGIGHSGKGDISANKHTYLARAYRPR*
Ga0105067_110753513300009812Groundwater SandMAKEPQRIDISSIPELLRIAQEVRRTNESAVLQQESEELAMLTPIKPVAKRRARGKPTSADDPLWKLVGIGHSGKGDISENTHKYLAEAYLHHKQA*
Ga0126310_1107857313300010044Serpentine SoilMAKEPRHIDISSIPELQKLVREVRQTNEPSILREEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHQYLA
Ga0126382_1082263623300010047Tropical Forest SoilMAKEKEPKRIDISSIPELLSIAQEVRRTNESRILKQESEDLAMLIPITPAAKRRVRGKPTSADDPLWKLIGIGHSGKGDISANKHQYLADAYLHHK*
Ga0126370_1088508323300010358Tropical Forest SoilMAKEPNHIDISSIPELQKLVHEVRKTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVSADDPLWKLVGIGHSGKGDISANKHKYPAEAYLPHKQA*
Ga0126370_1254867213300010358Tropical Forest SoilMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
Ga0126376_1058709713300010359Tropical Forest SoilMAKEPNRIDISSIPELLKLVHEVRQTNEPRILREESEDVAMLTPLKPRVTRSVRGKPTSADDPLWKLVGIGHSGKGDISANKHKYLAEAYLPHKQV*
Ga0126376_1130259213300010359Tropical Forest SoilMVKEPKYIDISSIPELLKLVHEVRQTNEPRILREESEDVAMLTPLKPKSTRSVRGKPVTADDPLWKLVGIGHSGKGDVSENKHKYLARA
Ga0126378_1168341613300010361Tropical Forest SoilMAKEPNRIDISSIPELQKLVHEVRQTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVSADDPLWKLVGIGHSGKGDISANKHTYLAEAYLDDKHK
Ga0126377_1081165913300010362Tropical Forest SoilMAKEPRHIDISSIPELQKLVQEVRQTKAPTILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHTYLAEAYLPHKQV*
Ga0126377_1117763823300010362Tropical Forest SoilMAKELKRIDISSIPDLVKLAHEVRRTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKSDVSANKHTYLAEAYLPHKQV*
Ga0126379_1083004823300010366Tropical Forest SoilMAKEPNRIDISSIPELQKLVHEVRQTNEPRILREESEDVAMLTPLKPRAKRSGRSKPVRADDPLWKLVGIGHSGKGDISANKHKYLAEAYLPRKQV*
Ga0126383_1255102613300010398Tropical Forest SoilMAKEFKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLTPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQG*
Ga0137391_1048389423300011270Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVVKRSVRGKPTTGDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0137393_1036147313300011271Vadose Zone SoilKEEVLPMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0137388_1043143713300012189Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSGRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA*
Ga0137388_1118160923300012189Vadose Zone SoilKGGVKQMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQV*
Ga0137383_1058762813300012199Vadose Zone SoilLTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAYLPHKQV*
Ga0137365_1110816923300012201Vadose Zone SoilMAKELKHIDISSIPELLKLVQEVRQTNEPSILREESEDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
Ga0137374_1088453923300012204Vadose Zone SoilILTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAYLPHKQV*
Ga0137377_1154216313300012211Vadose Zone SoilLTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEA
Ga0137377_1170110323300012211Vadose Zone SoilMAKEKEPKRIDITRIPELLSIAQEVRRTNESRILKQESEDLAMLTPIKPVAKRSVRGKPTSADDPLWKLIGIGHSGKGDISANKHQYLADA
Ga0150985_11509504523300012212Avena Fatua RhizosphereMCVKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSAN
Ga0137369_1055483313300012355Vadose Zone SoilMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAYLPHKQV*
Ga0137384_1086509723300012357Vadose Zone SoilMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHTYLAEAYLPRKQV*
Ga0137360_1063332313300012361Vadose Zone SoilKLVQEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHTYLAEAYLSHKQV*
Ga0137360_1064970423300012361Vadose Zone SoilMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV*
Ga0137361_1011749323300012362Vadose Zone SoilLTKEVKHMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHTYLAEAYLSHKQV*
Ga0137358_1043610223300012582Vadose Zone SoilMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHTYLAEAYLSHNQV*
Ga0137395_1121350113300012917Vadose Zone SoilMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVTGKPTAADDPLRKLVGIGHSGKGDVSENKHKYL
Ga0137394_1004894243300012922Vadose Zone SoilMAKEKEPKRIDISRIPELLNLAHEVRSTNESRILQQEREDLAMLTPITPMAKRRLKSKPTSVDDPLWKLVGIGHSGKGDISENTHKYLADAYLHHK*
Ga0137407_1035126023300012930Vadose Zone SoilMAKEKEPKRIDITRIPELLSIAQEVRRTNESRILKQESEDLAMLTPIKPVAKRSVRGKPTSADDPLWKLIGIGHSGKGDISGNKHKYLADAYLHHKEA*
Ga0137410_1177522423300012944Vadose Zone SoilMAKELKRIDISSVPELMKLVQEVRSTNEPRILQEESEDVALLTPLKPVSKRSVRGKPTTADDPLWKLVGIGHSGKGDISANKHTYLARAYRPR*
Ga0126375_1111182923300012948Tropical Forest SoilEKGGVTQMAKEPRHIDISSIPELQKLVQEVRQTNEPSILREESEDVAMLTPLKPVTRKRVRSKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRKQV*
Ga0163162_1085366223300013306Switchgrass RhizosphereMAKEPRHIDISSIPELLKLVQEVRQTNTPTILQQEREDVAMLIPMKPVGKTRVRGKPVTADDPLWKLVGIGHSGKGDISANKHTYLARAYRPR*
Ga0182000_1067097613300014487SoilVSKEVNQMAKEPKRIDISRMPELLSIAQEVRSTNEPRILQQENEDVAMLTPITPVAKRSVRGNPTSADDPLWKLIGIGHSGKGDISENTHKYLAEASLHHK*
Ga0137412_1022991223300015242Vadose Zone SoilMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENK
Ga0182035_1043318433300016341SoilPELVKLAHEVRSTNDPTILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLAGIGHSGKSDVSANKHKYLAEAYLPHKQV
Ga0182039_1087530013300016422SoilKRIDISSIPDLLKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKRSVRGKPTSAEDPLWKLVGIGHSGKGDISANKHKYLAEAYLPHKQV
Ga0184637_1055338023300018063Groundwater SedimentMAKELKRIDIGSIPELLKLVQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGQPTSADDPLWKLVGIGHSGRGDISANKHTYLADASLHHKQA
Ga0184633_1012136523300018077Groundwater SedimentMAKELKRIDIGSIPELLKLVQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGQQTSADDPLWKLVGIGHSGRGDISANKHTYLADASLHHKQA
Ga0184627_1043538623300018079Groundwater SedimentKELKRIDIGSIPELLKLVQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGKPTSADDPLWKLVGIGHSGRGDISANKHTYLADASLHHKQA
Ga0190265_1154708423300018422SoilVVYCNKGKYLAGTYLKGEVKQMAKEKAPKRIDISSIPELLSMAQEVRRTNESRILKQESEDLAMLTPITPVAKRSVRGKPTSADDPLWKLVGIGHSGKGDISENKHKYLADAYLHHKEA
Ga0190272_1126586713300018429SoilMAKEKALQRIDISGIPELLSIAQEVRQTNEPAILQQKREELAMLTPIKPVVKRRVRGKPTNADDPLWNLVGIGHSGKGDVSANKHKYLAEAYLPHKQA
Ga0190275_1107257013300018432SoilMAKEKALQRIDISGIPELLSIAQEVRHTNEPAILQQKREELAMLTPIKPVAKRRVRGKPTNADDPLWNLVGIGHSGKGDVSANKHKYLAEAYLPHKQA
Ga0190270_1066427523300018469SoilMRKEKAPKRIDISRIPELLNLAQEVRSTKESCILQQGSEDLVMLTPVAKRRIRGKPITADDPLWKLVGIGHSGKGDISETNHKYLAEAYLPHKPA
Ga0187892_1056917913300019458Bio-OozeMAKEKEPKRIDISSMPELLHIVQEVRTTNEPAVLQQENEDVAMLTPIKSAGKRRGRGKPVTADDPLWKLVGIGRSGKGDVSANKHQYLAEAYLPRKQT
Ga0212128_1095612713300022563Thermal SpringsMAKELKRIDISGIPELLSIAEEVRRTNEPCVLKQDNEDLVIVTPIKPVAKRGAKGKPVTKDDPLWKLVGIGHSGGPGDVSANKHQYLADAYLHQQKQA
Ga0209751_1058206023300025327SoilLVKELKRVDISNIPELVRIAQEVRDSNEPQLLRRDNEELAILTPVRPSVKRRPRGRPTTADDPLWKLVGMGDSGGPGDVSVNKHKYLAEAYLHGDKHA
Ga0207684_1014296323300025910Corn, Switchgrass And Miscanthus RhizosphereMAKEPKHIDISSIPELVKLVHEVRQTNEPSILREESEDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISENKHKYLAEAHR
Ga0214469_122424213300027636SoilMAKEKEPQRIDISSIPELLKLVQEVRQTNEPTILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHK
Ga0209593_1001091733300027743Freshwater SedimentMAKEKAPKRIDISRIPELLHLAQEVRSTNESRILQQESEELAMLTPITPVAKRSVRGKPTTADDPLWKLVGIGHSGKGDISANTHQYLADAYLHHKQA
Ga0209180_1014383733300027846Vadose Zone SoilMAKETKHIDVSSIPELVKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVTKRSVRGKPTSVDDPLWKLVGIGHSGRGDISENKHKYLAEAYLHHKQA
Ga0209590_1018442423300027882Vadose Zone SoilMAKELKRIDISSIPELVKFAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRKQV
Ga0209590_1039148523300027882Vadose Zone SoilMAKETKHIDVSSIPEVLKLAQEVRRTNEPAVLQQEREDLAMLTPIKPVAKRSVRGKPTSGDDPLWKLVGIGHSGRGDISENKHQYLAEAYLHHKQT
Ga0209382_1030604313300027909Populus RhizosphereMAKEPRHIDISSIPELQKLVHEVRQTNEPAILREEREDVAKLTPIKSKAKRSVRGKPTSADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPRREV
Ga0209382_1138269523300027909Populus RhizosphereMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVPQRGARGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLHHKQT
Ga0209853_105808733300027961Groundwater SandMAKEPKHIDISSIPELVKLVHEVRQTNEPSILQEEREDVAMLTPLKPAAKKSVRGKPTTGDDPLWKLIGIGHSGKGDISANKHTYLAEAYLPHKQV
Ga0299907_1021742923300030006SoilMAKEKEPQRIDISSIPELLKLVQEMRQTNEPSILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQT
Ga0299907_1029411423300030006SoilMAKENAPKRIDISRMPELLQLAHEVRATNEPAILQQEREDLAMLTPIHPVARRRVRGKPTSADDPLWNLVGIGHSGRGDISENTHKYLAEAYLHHKHA
Ga0302046_1096865423300030620SoilMANEPKRIDISRIPELLHLAQEVQSTNESRILQQDSEDLAMLTPITPVSKRSVRGKPTSADDPLWKLVGIGHSGRGDISENKHQYLADVYLHRKQA
Ga0308203_109718713300030829SoilMAKELRHIDISSMPELLKLVREVRQTNEPSILREESEDVAMLMPIKPVGKTRVRGKPVTADDPLLKLVGIGHSGKSDISANKHAYLARAYRPR
Ga0308205_103606823300030830SoilMAKELKHIDISSIPELLKLVQEVRQTNEPSILREESEDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0308206_116770123300030903SoilMAKEKAPKRIDISRIPELLTLAQEVRSTNESRILQQESEDLAMLTPITPVAKRSVRGKPTSADDPLWKLVGIGHSGKGDISENTHQYLADAYLHHKQA
Ga0308178_108972713300030990SoilKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLRPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0308190_109524523300030993SoilGKQMAKELKRIDISSIPELVKLAHEVRSTNESSILQQEREDVAMLTPLKPVPQRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHTYLADAYLHHKQV
Ga0308204_1020235923300031092SoilMATELKHIDISSIPELLKLVQEVRQTNEPSILREESEDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0308204_1030982613300031092SoilMAKEKALQRIDISGIPELLSIAQEVRQTNESAILQQKREELAMLTPIKPVAKRRVRGKPTSADDPLWKLIGIGHSGRGDISANKHQYLAEAYLPHKQA
Ga0308197_1016269923300031093SoilMAKELRHIDISSMPELLKLVREVRQTNEPSILREESEDVAMLMPIKPVGKTRVRGKPVTADDPLLKLVGIGHSGKSDISANKHACLARAYRPR
Ga0308197_1024297513300031093SoilSLKRIDKGGVKQMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSANKHKYLAEAYLPRKQE
Ga0308187_1007098823300031114SoilMAEELKRIDISSIPELVKLANEVRSTNEPSILQQEREDVAMLTPLRPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0299914_1068873223300031228SoilMAKEKEPQRIDISSIPELLKLVQEVRQTNEPTILREESEDVAMLTPLKPVTKRSVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHEQA
Ga0306925_1024708723300031890SoilMAKELKRIDISSIPELVKLAHEVRSTNDPTILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLAGIGHSGKSDVSANKHKYLAEAYLPHKQV
Ga0307411_1208874723300032005RhizosphereQMAKELKRIDISSIPELVKLAHEVRSTNEPSILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLVGIGHSGKGDVSENKHKYLAEAYLPHKQV
Ga0306920_10401588913300032261SoilMAKELKRIDISSIPELVKLAHEVRSTNDPTILQQEREDVAMLTPLKPVTKRGVRGKPTTADDPLWKLAGIGHSGKSDVSANKHKYLTKAYLPHKQ
Ga0214472_1001087933300033407SoilMAKDLKRIDISGIPELLSIAHEVRSANESRILRQDGEDLAILTPIKPAAKRSARGKPVTKDDSLWKLVGIGHSGAGDISANKHKYLAEAYLNHPKQA
Ga0334913_103541_331_6003300034172Sub-Biocrust SoilMAKEPKHIEISRMPELVKLVHEVRSTNEPTILREERQDVAMLTPIKPVVTRSVRGTPVTPDDPLFKLVGIGHSGKGDVSANTHTYLADAS
Ga0370545_110154_372_6083300034643SoilLAQEVRTTNESAVLQQESEDVALLSPIKPVTKRRARGKPTTADDPLWKLVGIGHSGRGDISANKHTYLADAYLHHKQA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.