NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F078311

Metagenome / Metatranscriptome Family F078311

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078311
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 45 residues
Representative Sequence MFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Number of Associated Samples 86
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 53.98 %
% of genes near scaffold ends (potentially truncated) 50.86 %
% of genes from short scaffolds (< 2000 bps) 56.90 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.552 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(37.069 % of family members)
Environment Ontology (ENVO) Unclassified
(34.483 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.448 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.57%    β-sheet: 15.22%    Coil/Unstructured: 65.22%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF13561adh_short_C2 3.48
PF11154DUF2934 2.61
PF02321OEP 2.61
PF07676PD40 2.61
PF04397LytTR 1.74
PF07366SnoaL 1.74
PF13231PMT_2 1.74
PF03713DUF305 1.74
PF13460NAD_binding_10 1.74
PF09907HigB_toxin 1.74
PF00578AhpC-TSA 1.74
PF08281Sigma70_r4_2 1.74
PF01120Alpha_L_fucos 0.87
PF00561Abhydrolase_1 0.87
PF00248Aldo_ket_red 0.87
PF00877NLPC_P60 0.87
PF01833TIG 0.87
PF16640Big_3_5 0.87
PF13560HTH_31 0.87
PF00593TonB_dep_Rec 0.87
PF17131LolA_like 0.87
PF10282Lactonase 0.87
PF13683rve_3 0.87
PF12704MacB_PCD 0.87
PF13505OMP_b-brl 0.87
PF00202Aminotran_3 0.87
PF12697Abhydrolase_6 0.87
PF03683UPF0175 0.87
PF04185Phosphoesterase 0.87
PF01545Cation_efflux 0.87
PF01370Epimerase 0.87
PF01841Transglut_core 0.87
PF12833HTH_18 0.87
PF08547CIA30 0.87
PF01546Peptidase_M20 0.87
PF13191AAA_16 0.87
PF00106adh_short 0.87
PF03458Gly_transporter 0.87
PF00873ACR_tran 0.87
PF07635PSCyt1 0.87
PF00196GerE 0.87
PF13432TPR_16 0.87
PF03551PadR 0.87
PF01979Amidohydro_1 0.87
PF00903Glyoxalase 0.87
PF00144Beta-lactamase 0.87
PF13646HEAT_2 0.87
PF01593Amino_oxidase 0.87
PF01402RHH_1 0.87
PF06296RelE 0.87
PF03544TonB_C 0.87
PF13174TPR_6 0.87
PF13385Laminin_G_3 0.87
PF00589Phage_integrase 0.87
PF01850PIN 0.87
PF02272DHHA1 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 5.22
COG3544Uncharacterized conserved protein, DUF305 familyFunction unknown [S] 1.74
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.87
COG4737Uncharacterized conserved proteinFunction unknown [S] 0.87
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.87
COG3669Alpha-L-fucosidaseCarbohydrate transport and metabolism [G] 0.87
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.87
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 0.87
COG2860Uncharacterized membrane protein YeiHFunction unknown [S] 0.87
COG2367Beta-lactamase class ADefense mechanisms [V] 0.87
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.87
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.87
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.87
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.87
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.87
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.87
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.87
COG0791Cell wall-associated hydrolase, NlpC_P60 familyCell wall/membrane/envelope biogenesis [M] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.55 %
UnclassifiedrootN/A3.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10040262All Organisms → cellular organisms → Bacteria3647Open in IMG/M
3300001593|JGI12635J15846_10811874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300001661|JGI12053J15887_10171482All Organisms → cellular organisms → Bacteria → Acidobacteria1123Open in IMG/M
3300002906|JGI25614J43888_10000104All Organisms → cellular organisms → Bacteria24665Open in IMG/M
3300002917|JGI25616J43925_10081206All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1358Open in IMG/M
3300005167|Ga0066672_10306668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1032Open in IMG/M
3300005176|Ga0066679_10283851All Organisms → cellular organisms → Bacteria → Acidobacteria1073Open in IMG/M
3300005180|Ga0066685_10076866All Organisms → cellular organisms → Bacteria → Proteobacteria2196Open in IMG/M
3300005451|Ga0066681_10047437All Organisms → cellular organisms → Bacteria2332Open in IMG/M
3300005542|Ga0070732_10074870All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1976Open in IMG/M
3300005553|Ga0066695_10815201All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300005557|Ga0066704_10045832All Organisms → cellular organisms → Bacteria2744Open in IMG/M
3300005559|Ga0066700_10598849All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300005561|Ga0066699_10019946All Organisms → cellular organisms → Bacteria3652Open in IMG/M
3300005568|Ga0066703_10741446All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300005569|Ga0066705_10568214All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300005575|Ga0066702_10018464All Organisms → cellular organisms → Bacteria → Acidobacteria3344Open in IMG/M
3300005575|Ga0066702_10309793All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium962Open in IMG/M
3300005598|Ga0066706_10415638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1071Open in IMG/M
3300005602|Ga0070762_10041813All Organisms → cellular organisms → Bacteria2497Open in IMG/M
3300005921|Ga0070766_10113378All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1621Open in IMG/M
3300006893|Ga0073928_10544237All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300007258|Ga0099793_10022020All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium2628Open in IMG/M
3300007265|Ga0099794_10048609All Organisms → cellular organisms → Bacteria → Acidobacteria2036Open in IMG/M
3300007788|Ga0099795_10287664All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300009090|Ga0099827_11325988All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300010337|Ga0134062_10606251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300012189|Ga0137388_10878816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium829Open in IMG/M
3300012198|Ga0137364_10026577All Organisms → cellular organisms → Bacteria3641Open in IMG/M
3300012198|Ga0137364_10341913All Organisms → cellular organisms → Bacteria → Acidobacteria1115Open in IMG/M
3300012198|Ga0137364_10540765All Organisms → cellular organisms → Bacteria → Acidobacteria877Open in IMG/M
3300012200|Ga0137382_10057867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2444Open in IMG/M
3300012202|Ga0137363_10083804All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2382Open in IMG/M
3300012202|Ga0137363_10462983All Organisms → cellular organisms → Bacteria → Acidobacteria1062Open in IMG/M
3300012202|Ga0137363_10793109All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300012202|Ga0137363_11343770All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300012202|Ga0137363_11552175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300012202|Ga0137363_11801222All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300012203|Ga0137399_10548558All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300012205|Ga0137362_10228332All Organisms → cellular organisms → Bacteria1606Open in IMG/M
3300012205|Ga0137362_11483983All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300012208|Ga0137376_10164339All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1913Open in IMG/M
3300012211|Ga0137377_10372321All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1366Open in IMG/M
3300012359|Ga0137385_10363376All Organisms → cellular organisms → Bacteria → Proteobacteria1238Open in IMG/M
3300012361|Ga0137360_10088976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2335Open in IMG/M
3300012362|Ga0137361_10007180All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7681Open in IMG/M
3300012362|Ga0137361_10024967All Organisms → cellular organisms → Bacteria4628Open in IMG/M
3300012363|Ga0137390_11328527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300012582|Ga0137358_10861933All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300012918|Ga0137396_10011560All Organisms → cellular organisms → Bacteria5423Open in IMG/M
3300012922|Ga0137394_10197728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1716Open in IMG/M
3300015051|Ga0137414_1100318All Organisms → cellular organisms → Bacteria → Acidobacteria2389Open in IMG/M
3300015241|Ga0137418_10123541Not Available2306Open in IMG/M
3300015241|Ga0137418_10349582All Organisms → cellular organisms → Bacteria → Acidobacteria1221Open in IMG/M
3300015359|Ga0134085_10486373All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300018468|Ga0066662_11116734All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium790Open in IMG/M
3300020199|Ga0179592_10003058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7019Open in IMG/M
3300020199|Ga0179592_10005695All Organisms → cellular organisms → Bacteria5306Open in IMG/M
3300020199|Ga0179592_10006914All Organisms → cellular organisms → Bacteria4853Open in IMG/M
3300020199|Ga0179592_10131174All Organisms → cellular organisms → Bacteria → Proteobacteria1149Open in IMG/M
3300020579|Ga0210407_10028474All Organisms → cellular organisms → Bacteria → Acidobacteria4153Open in IMG/M
3300020579|Ga0210407_10036757All Organisms → cellular organisms → Bacteria3643Open in IMG/M
3300020579|Ga0210407_10051709All Organisms → cellular organisms → Bacteria3069Open in IMG/M
3300020579|Ga0210407_10172392All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300020579|Ga0210407_10843478All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium705Open in IMG/M
3300020580|Ga0210403_10004935All Organisms → cellular organisms → Bacteria11408Open in IMG/M
3300020581|Ga0210399_10009947All Organisms → cellular organisms → Bacteria7435Open in IMG/M
3300020583|Ga0210401_10025029All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5708Open in IMG/M
3300020583|Ga0210401_10184659All Organisms → cellular organisms → Bacteria → Acidobacteria1941Open in IMG/M
3300020583|Ga0210401_10314907All Organisms → cellular organisms → Bacteria → Acidobacteria1426Open in IMG/M
3300021088|Ga0210404_10143558All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300021171|Ga0210405_10000269All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae72641Open in IMG/M
3300021171|Ga0210405_10003057All Organisms → cellular organisms → Bacteria16694Open in IMG/M
3300021420|Ga0210394_10056823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3411Open in IMG/M
3300021433|Ga0210391_11125652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300021474|Ga0210390_10025076All Organisms → cellular organisms → Bacteria → Acidobacteria4858Open in IMG/M
3300021474|Ga0210390_10553749All Organisms → cellular organisms → Bacteria → Acidobacteria966Open in IMG/M
3300021478|Ga0210402_10023581All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5288Open in IMG/M
3300021479|Ga0210410_10330498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1367Open in IMG/M
3300021479|Ga0210410_11691271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300022557|Ga0212123_10486777All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300024330|Ga0137417_1204119All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300024330|Ga0137417_1420112All Organisms → cellular organisms → Bacteria4295Open in IMG/M
3300025916|Ga0207663_10095412All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1984Open in IMG/M
3300026277|Ga0209350_1014273All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2509Open in IMG/M
3300026314|Ga0209268_1035551All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1674Open in IMG/M
3300026319|Ga0209647_1000695All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae30771Open in IMG/M
3300026319|Ga0209647_1000695All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae30771Open in IMG/M
3300026335|Ga0209804_1044057All Organisms → cellular organisms → Bacteria → Acidobacteria2205Open in IMG/M
3300026355|Ga0257149_1044357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300026496|Ga0257157_1025921All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300026527|Ga0209059_1022536All Organisms → cellular organisms → Bacteria → Acidobacteria2863Open in IMG/M
3300026538|Ga0209056_10071102All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2985Open in IMG/M
3300026551|Ga0209648_10032426All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4552Open in IMG/M
3300026551|Ga0209648_10341972All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300026557|Ga0179587_10012663All Organisms → cellular organisms → Bacteria4403Open in IMG/M
3300027635|Ga0209625_1001169All Organisms → cellular organisms → Bacteria → Acidobacteria6298Open in IMG/M
3300027643|Ga0209076_1124324All Organisms → cellular organisms → Bacteria → Acidobacteria728Open in IMG/M
3300027645|Ga0209117_1031306All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300027663|Ga0208990_1034962All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300027748|Ga0209689_1149716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1123Open in IMG/M
3300027903|Ga0209488_10796698All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300028536|Ga0137415_10303537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1400Open in IMG/M
3300029636|Ga0222749_10025247All Organisms → cellular organisms → Bacteria → Proteobacteria2486Open in IMG/M
3300031090|Ga0265760_10033415All Organisms → cellular organisms → Bacteria1520Open in IMG/M
3300031231|Ga0170824_111146797All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300031708|Ga0310686_113928049All Organisms → cellular organisms → Bacteria → Acidobacteria1262Open in IMG/M
3300031754|Ga0307475_10671190All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium827Open in IMG/M
3300031754|Ga0307475_10717822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300031754|Ga0307475_11115905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300031823|Ga0307478_10047085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3184Open in IMG/M
3300031962|Ga0307479_10140175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2368Open in IMG/M
3300032205|Ga0307472_100011829All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4421Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil37.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.17%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.17%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.72%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1004026253300001593Forest SoilMFVLPLLRENKTPGCPIQRVLENDFVVVAGTGTARHFIR
JGI12635J15846_1081187423300001593Forest SoilMFVLPLLRENNTPGCPIQRVLENDFVVVTGTGIARDFIRILTVEMHGKD
JGI12053J15887_1017148213300001661Forest SoilPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
JGI25614J43888_1000010443300002906Grasslands SoilMFVLPLLRENKNPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
JGI25616J43925_1008120623300002917Grasslands SoilSGRPMFVLPLLRENKTPGCPIQRVLENDFVVVTSTGTARDFIRLLTVELH*
Ga0066672_1030666833300005167SoilVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0066679_1028385113300005176SoilPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0066685_1007686623300005180SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTCTARDFIRLLTVELH*
Ga0066681_1004743733300005451SoilPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0070732_1007487033300005542Surface SoilMFGLPLLRENKTPGCPVQRVLENDFAVVTGTGTERDFIRLLTVELH*
Ga0066695_1081520123300005553SoilTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0066704_1004583213300005557SoilENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0066700_1059884913300005559SoilLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0066699_1001994613300005561SoilRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIWLLTVELH*
Ga0066703_1074144613300005568SoilRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0066705_1056821433300005569SoilPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVALH*
Ga0066702_1001846443300005575SoilGLRSGRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIWLLTVELH*
Ga0066702_1030979313300005575SoilKTPGCPIQRVLENYFVVVTGTGTARDFIRLLTAELL*
Ga0066706_1041563813300005598SoilLLSGRPIFVLPLLRENKTPGCPIQRVLENNFVVVTGTGTTRDFIRILAVELH*
Ga0070762_1004181313300005602SoilMFVLALPRENKTLGCPIQRVLENDFVVVTGTGTARDFARLLTVELC*
Ga0070766_1011337823300005921SoilMFVLPLLRENKTPGCPIQRVLENNFVVVTGTASDFIRLLTVELQ*
Ga0073928_1054423723300006893Iron-Sulfur Acid SpringMFVTPLLGENEAPGCPIQRALENDFVVVTGTGTARHFIRLLTVELHSEDKEK*
Ga0099793_1002202013300007258Vadose Zone SoilMLVLPLLRENKTPGCPIQRVLENEFAVVTGTARDFIRLLTVELH*
Ga0099794_1004860943300007265Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDSVVVTGTGPARDFIRLLTVELH*
Ga0099795_1028766413300007788Vadose Zone SoilMFVLPLLRENKTPGCPIQSVLENDFVVVTGTGTARDFIPAPQ
Ga0099827_1132598823300009090Vadose Zone SoilMDFRPTTLQNGPFSCWIPLLRENETPIQRVLENDSVVVTGTARDFIRLL
Ga0134062_1060625123300010337Grasslands SoilSGRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137391_1115442013300011270Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARD
Ga0137388_1087881623300012189Vadose Zone SoilLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137364_1002657713300012198Vadose Zone SoilLTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137364_1034191313300012198Vadose Zone SoilTPDCPIQRVLENDFVVVTGTGTARDFIRLLTIELH*
Ga0137364_1054076513300012198Vadose Zone SoilDGSGMTLTLLSGRPIFVLPLLRENKTPGCPIQRVPENDFVVVTGTARDFIRLLTVELH*
Ga0137382_1005786713300012200Vadose Zone SoilMFELPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137363_1008380453300012202Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGSARDFIRLLTVELH*
Ga0137363_1046298323300012202Vadose Zone SoilGLPSGRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137363_1079310913300012202Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELQ*
Ga0137363_1134377013300012202Vadose Zone SoilLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELQ*
Ga0137363_1155217513300012202Vadose Zone SoilTPGCPIQTVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137363_1180122213300012202Vadose Zone SoilMFVLPLLRENNTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137399_1054855833300012203Vadose Zone SoilMFVLPLLRENKTPGYPIQRVLENDFVVVTGTSTARDFIRLLTVELQ*
Ga0137362_1022833213300012205Vadose Zone SoilKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137362_1148398313300012205Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENNFVVVTGTGTARDF
Ga0137376_1016433913300012208Vadose Zone SoilKTPDCPIQRVLENDFVVVTGTGTARDFIRLLTIELH*
Ga0137377_1037232113300012211Vadose Zone SoilGPFSILPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137385_1036337613300012359Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137360_1008897613300012361Vadose Zone SoilGRPMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGSARDFIRLLTVELH*
Ga0137361_1000718063300012362Vadose Zone SoilRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH*
Ga0137361_1002496743300012362Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVVTGIGTPARDFLRLLSVELR*
Ga0137390_1132852713300012363Vadose Zone SoilMHEYALLRENEAPACPIQRALENDFVVVIGTGKVRDFIRILTVELQ*
Ga0137358_1086193323300012582Vadose Zone SoilLRENKIPGCPIRRVLENDFVVVTGTARDFIRLLTVELH*
Ga0137396_1001156033300012918Vadose Zone SoilMFVLPLLSENKTPGYPIQRVLENDFVVVTGTGTARDFIRLLTVELQ*
Ga0137394_1019772823300012922Vadose Zone SoilFVLPLLRENKTPGCPIQRVLENDFVVVTGTGIARDFIRLLTVELH*
Ga0137414_110031833300015051Vadose Zone SoilNKTPGWLIQRVLENDSVVVTGTARDFIRLLTVELH*
Ga0137418_1012354133300015241Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGAGPARDFIRLLTIELHWKDK
Ga0137418_1034958213300015241Vadose Zone SoilLLRENKTPGCPIQRVLENDFVVVTGTARDFIRLLTIELH*
Ga0134085_1048637313300015359Grasslands SoilSGRPIFVLPLLRENKTPGCPIQRVLENDIVVVTGTGTARDFIRLLTVELH*
Ga0066662_1111673413300018468Grasslands SoilGLARRKTPGCPIQRVLENYFVVVTGTGTARDFIRLLTAELL
Ga0179592_1000305823300020199Vadose Zone SoilMLVLPLLRENKTPGCPIQRVLENEFAVVTGTARDFIRLLTVELH
Ga0179592_1000569563300020199Vadose Zone SoilMFVLPLLRENKTPGYPIQRVLENDFVVVTGTSTARDFIRLLTVELQ
Ga0179592_1000691453300020199Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Ga0179592_1013117433300020199Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGIARDFIRLLTVELH
Ga0210407_1002847433300020579SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRFLTVELH
Ga0210407_1003675723300020579SoilMFVLPLLRENKIPGCPIQRVLENHFVVVTGTARDFIRLLTVELH
Ga0210407_1005170913300020579SoilMFVLPLLRENKTPGCPIQRVLENNFVVVTGTGAARDFIRLLTVELH
Ga0210407_1017239233300020579SoilMFVLALPRENKTLGCPIQRVLENDFVVVTGTGTARDFTWLLTVELC
Ga0210407_1084347823300020579SoilNKVLGCPIQRVLENDFVVVTGTAGDFIRLLTVELHGKQ
Ga0210403_10004935103300020580SoilMFVLALPRENKTLGCPIQRVLENDFVVVTGTGTARDFTRLLTVELC
Ga0210399_1000994773300020581SoilMFVLALPPENKTLGCPIQRVLENDFVVVTGTGTARDFTRLLTVELC
Ga0210401_1002502933300020583SoilMFVLPLLRENKTPGCPIQRVLENNFVVVTGTASDFIRLLTVELQ
Ga0210401_1018465943300020583SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGIGTARDFIRLRTVELH
Ga0210401_1031490713300020583SoilMFVLTLLRENKTPGCPIQTVLENDFVVVTGTGTARDFIRLLTIELH
Ga0210404_1014355813300021088SoilMFGLPLLRENKTPGCPIQRVLKNDFVVVTGTGTARDFIRLLTVELH
Ga0210405_10000269603300021171SoilMKQSVDALSSDRLPLLRENKTPGCPIQRVLENDFVVVTGTARDFIRLLTVELH
Ga0210405_10003057123300021171SoilMFVLPLRRENKTPGCPIQRVLENDFVVVTSTGTARDFVRLLTVELH
Ga0210394_1005682323300021420SoilMFVLPLLREKKTPGCPIQRVLENDFVVVTGTGTARDFIRLPTVELL
Ga0210391_1112565223300021433SoilASGRPMFVLPLLRENKTPGCPIQRVLENDFVVVTGIGTARDFIRLRTVELH
Ga0210390_1002507653300021474SoilMFVLPLLRENKTPGCPIQRVLENDFVVLTSTGTARDFIQPLTVELH
Ga0210390_1055374913300021474SoilSGRPMFVLPLLRENKTPGCPIQRVLENDFVVVTGIGTARDFIRLRTVELH
Ga0210402_1002358123300021478SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIQPLTLELH
Ga0210410_1033049823300021479SoilMFVLPLLRENKTPGCPDQRVLENDFVVVTGTCTARDFIRLLTVELQWKDKEKT
Ga0210410_1169127113300021479SoilRENKTPGCPIQRALENDFVVVTGTGTARDFIRLLTVELH
Ga0212123_1048677723300022557Iron-Sulfur Acid SpringMFVTPLLGENEAPGCPIQRALENDFVVVTGTGTARHFIRLLTVELHSEDKEK
Ga0137417_120411913300024330Vadose Zone SoilLRVVQFRGKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Ga0137417_127306313300024330Vadose Zone SoilMFVLPLLRENKTPGCPIQTVLENDFVVVTGTGTTRH
Ga0137417_1420112103300024330Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTSTARDFIRLLTVELQ
Ga0207663_1009541213300025916Corn, Switchgrass And Miscanthus RhizosphereSGVVAHVRTPLLRGNKTPGCPIQRVFQNDFVVVTGTGTARDFIRLLTVELH
Ga0209350_101427333300026277Grasslands SoilRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTSTARDFIRLLTVELH
Ga0209268_103555133300026314SoilPIFVLPLLRENKTPGCPIQRVLQNDFVVVTGTGTARDFIRNLTAELH
Ga0209647_100069513300026319Grasslands SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTSTGTARDFIRLLTVELH
Ga0209647_1000695173300026319Grasslands SoilMFVLPLLRENKNPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Ga0209804_104405713300026335SoilNKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Ga0257149_104435713300026355SoilRSGRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Ga0257157_102592113300026496SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVE
Ga0257158_112583323300026515SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTAR
Ga0209059_102253613300026527SoilTPGCPIQRVLENDFVVVTGTGTARDFIWLLTVELH
Ga0209056_1007110213300026538SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTCTARDFIRLLTVELH
Ga0209648_1003242643300026551Grasslands SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRVLTVELH
Ga0209648_1034197213300026551Grasslands SoilLRENKAPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELH
Ga0179587_1001266333300026557Vadose Zone SoilMFVLPLLSENKTPGYPIQRVLENDFVVVTGTGTARDFIRLLTVELQ
Ga0209625_100116943300027635Forest SoilMIVRHWAPEWEAHVRTPLLRESKTAGSPIQRVLENDFVVVTGTVAARDFILLLTVELH
Ga0209076_112432423300027643Vadose Zone SoilVIAGVPMFVLPLLRENKTPGYPIQRVLENDFVVVTGTSTARDFIRLLTVELQ
Ga0209117_103130623300027645Forest SoilMFVLPLLRENKTPGCPIQRVLENDFVVVAGTGTARHFIRLLTVELH
Ga0208990_103496213300027663Forest SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLL
Ga0209689_114971633300027748SoilSGRPIFVLPLLRENKTPGCPIQRVLENDFVVVTGT
Ga0209488_1079669813300027903Vadose Zone SoilNKTPGCPIQRVLENDFVVVTGTGTARDFIRLLTVELQ
Ga0137415_1030353713300028536Vadose Zone SoilMFVLPLLRENKTPGCPIQRVLENDFVVVTGTGTARDFIRLLT
Ga0222749_1002524713300029636SoilMFVLPLLRENKTPGCPIQRVLENEFVVVTGTGTARDFIRLLTV
Ga0265760_1003341513300031090SoilMFVFPLLRENKTPGCPIQRVLENDLVVVTGTGTARDFIRLLTVELH
Ga0170824_11114679713300031231Forest SoilMPFRELTTNSRPVAATPLLRENKTPGCPIQRVLENDFVVVTGTGAARDFIRLLAVEL
Ga0310686_11392804923300031708SoilMFVLPLLRENKTPGCPIQRVLENEFVVVTGTGTARDFIRLLTVELH
Ga0307475_1067119013300031754Hardwood Forest SoilVRTPLLRENKTPGCPIQRVLENDFVVVTGTGTALDFMRLLTVEPH
Ga0307475_1071782213300031754Hardwood Forest SoilMFVLPLLRKKKTPGCPIQRVLENDFVVVTGTGTALDFIRLLTVELH
Ga0307475_1111590513300031754Hardwood Forest SoilMFVLPLLRKNKTPGCPIQRVLENDFVVVTGTGTARHFIRLLTCRT
Ga0307478_1004708523300031823Hardwood Forest SoilMFGLPLLRENKTPGCPVQRVLEHDFVVVTGTGTARDSIRLLTVELHWKGKEKTG
Ga0307479_1014017513300031962Hardwood Forest SoilMFVLPLLRENKTPGCPIQRVLENNFVVVTGTARDFIRLLSVELH
Ga0307472_10001182973300032205Hardwood Forest SoilMFVLLLLRENETPGCPIQRVLENDFVVVTGTGTARDFIRLLTGELH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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