NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F078231

Metagenome Family F078231

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078231
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 57 residues
Representative Sequence MKTEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVREDFVNKRGD
Number of Associated Samples 64
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.59 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 72.41 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.621 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(56.897 % of family members)
Environment Ontology (ENVO) Unclassified
(86.207 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(89.655 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.81%    β-sheet: 0.00%    Coil/Unstructured: 51.19%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF05866RusA 39.66
PF03796DnaB_C 6.90
PF16786RecA_dep_nuc 6.03
PF07120DUF1376 3.45
PF01555N6_N4_Mtase 1.72
PF01807zf-CHC2 0.86
PF14284PcfJ 0.86
PF13539Peptidase_M15_4 0.86
PF00166Cpn10 0.86
PF02195ParBc 0.86
PF01464SLT 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 39.66
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 6.90
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 6.90
COG3756Uncharacterized conserved protein YdaU, DUF1376 familyFunction unknown [S] 3.45
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.72
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.72
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.72
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.86
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 0.86


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.62 %
All OrganismsrootAll Organisms41.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002142|M2t2FKB2_1355420All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae655Open in IMG/M
3300003277|JGI25908J49247_10057575Not Available999Open in IMG/M
3300003277|JGI25908J49247_10071681Not Available866Open in IMG/M
3300003393|JGI25909J50240_1043383All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae950Open in IMG/M
3300004126|Ga0066179_10054014Not Available943Open in IMG/M
3300005584|Ga0049082_10249427Not Available600Open in IMG/M
3300005584|Ga0049082_10249937Not Available599Open in IMG/M
3300005662|Ga0078894_10000078All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage55546Open in IMG/M
3300007734|Ga0104986_1928All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage49460Open in IMG/M
3300007973|Ga0105746_1362154Not Available507Open in IMG/M
3300008055|Ga0108970_11228914All Organisms → Viruses → Predicted Viral1854Open in IMG/M
3300008266|Ga0114363_1081742All Organisms → Viruses → Predicted Viral1791Open in IMG/M
3300008448|Ga0114876_1000891Not Available22811Open in IMG/M
3300009068|Ga0114973_10218163All Organisms → Viruses → Predicted Viral1037Open in IMG/M
3300009068|Ga0114973_10619990Not Available554Open in IMG/M
3300009151|Ga0114962_10000734All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage28607Open in IMG/M
3300009152|Ga0114980_10000443Not Available30100Open in IMG/M
3300009152|Ga0114980_10003391Not Available10935Open in IMG/M
3300009152|Ga0114980_10486263Not Available703Open in IMG/M
3300009152|Ga0114980_10753511Not Available543Open in IMG/M
3300009155|Ga0114968_10043603All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae2923Open in IMG/M
3300009155|Ga0114968_10137471All Organisms → Viruses → Predicted Viral1461Open in IMG/M
3300009155|Ga0114968_10598531Not Available584Open in IMG/M
3300009158|Ga0114977_10341689Not Available845Open in IMG/M
3300009158|Ga0114977_10629763Not Available576Open in IMG/M
3300009160|Ga0114981_10019941All Organisms → Viruses → Predicted Viral3876Open in IMG/M
3300009163|Ga0114970_10754863Not Available514Open in IMG/M
3300009164|Ga0114975_10472608Not Available678Open in IMG/M
3300009181|Ga0114969_10627497All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300009194|Ga0114983_1073086Not Available778Open in IMG/M
3300010885|Ga0133913_12352845All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300011010|Ga0139557_1003734All Organisms → Viruses → Predicted Viral3298Open in IMG/M
3300011115|Ga0151514_10202All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage29285Open in IMG/M
3300011339|Ga0153700_10304Not Available26348Open in IMG/M
3300013006|Ga0164294_10680206Not Available695Open in IMG/M
3300013006|Ga0164294_10959959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales574Open in IMG/M
3300013286|Ga0136641_1022229All Organisms → cellular organisms → Bacteria → Proteobacteria1955Open in IMG/M
3300014502|Ga0182021_11131853Not Available943Open in IMG/M
3300015050|Ga0181338_1001258All Organisms → Viruses → Predicted Viral4637Open in IMG/M
3300015050|Ga0181338_1001707All Organisms → Viruses → Predicted Viral3938Open in IMG/M
3300015050|Ga0181338_1001931Not Available3668Open in IMG/M
3300015050|Ga0181338_1003920All Organisms → Viruses → Predicted Viral2558Open in IMG/M
3300015050|Ga0181338_1004531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus2379Open in IMG/M
3300015050|Ga0181338_1005561All Organisms → Viruses → Predicted Viral2126Open in IMG/M
3300015050|Ga0181338_1011977All Organisms → Viruses → Predicted Viral1411Open in IMG/M
3300015050|Ga0181338_1016358Not Available1180Open in IMG/M
3300015050|Ga0181338_1020028Not Available1050Open in IMG/M
3300017700|Ga0181339_1001829All Organisms → Viruses → Predicted Viral3113Open in IMG/M
3300017700|Ga0181339_1015992Not Available854Open in IMG/M
3300017700|Ga0181339_1020142Not Available749Open in IMG/M
3300017700|Ga0181339_1027191Not Available632Open in IMG/M
3300017700|Ga0181339_1029012Not Available610Open in IMG/M
3300017716|Ga0181350_1004892All Organisms → Viruses3884Open in IMG/M
3300017716|Ga0181350_1006514All Organisms → Viruses → Predicted Viral3361Open in IMG/M
3300017716|Ga0181350_1025034Not Available1659Open in IMG/M
3300017716|Ga0181350_1042485All Organisms → Viruses → Predicted Viral1226Open in IMG/M
3300017716|Ga0181350_1152672Not Available538Open in IMG/M
3300017722|Ga0181347_1001571Not Available7656Open in IMG/M
3300017722|Ga0181347_1052000All Organisms → Viruses → Predicted Viral1235Open in IMG/M
3300017722|Ga0181347_1182994Not Available558Open in IMG/M
3300017736|Ga0181365_1099588Not Available704Open in IMG/M
3300017747|Ga0181352_1040615All Organisms → Viruses → Predicted Viral1377Open in IMG/M
3300017747|Ga0181352_1156085Not Available602Open in IMG/M
3300017754|Ga0181344_1027843All Organisms → Viruses → Predicted Viral1733Open in IMG/M
3300017754|Ga0181344_1055898Not Available1173Open in IMG/M
3300017754|Ga0181344_1161801Not Available636Open in IMG/M
3300017766|Ga0181343_1069337Not Available1020Open in IMG/M
3300017774|Ga0181358_1220516Not Available610Open in IMG/M
3300017777|Ga0181357_1233453Not Available645Open in IMG/M
3300017778|Ga0181349_1079320All Organisms → Viruses → Predicted Viral1251Open in IMG/M
3300017778|Ga0181349_1136558Not Available892Open in IMG/M
3300017780|Ga0181346_1001930Not Available9186Open in IMG/M
3300017780|Ga0181346_1059450All Organisms → Viruses → Predicted Viral1534Open in IMG/M
3300017780|Ga0181346_1082252All Organisms → Viruses → Predicted Viral1268Open in IMG/M
3300017785|Ga0181355_1275780Not Available638Open in IMG/M
3300019783|Ga0181361_110250Not Available729Open in IMG/M
3300019783|Ga0181361_112515Not Available663Open in IMG/M
3300019784|Ga0181359_1001905Not Available5856Open in IMG/M
3300019784|Ga0181359_1002664Not Available5254Open in IMG/M
3300019784|Ga0181359_1039442All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae1829Open in IMG/M
3300019784|Ga0181359_1039970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1817Open in IMG/M
3300019784|Ga0181359_1082251All Organisms → Viruses → Predicted Viral1205Open in IMG/M
3300019784|Ga0181359_1107990All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae1012Open in IMG/M
3300019784|Ga0181359_1136142Not Available860Open in IMG/M
3300020048|Ga0207193_1021597Not Available8000Open in IMG/M
3300021961|Ga0222714_10108086All Organisms → Viruses → Predicted Viral1744Open in IMG/M
3300021963|Ga0222712_10071936All Organisms → Viruses → Predicted Viral2496Open in IMG/M
3300022190|Ga0181354_1106308Not Available911Open in IMG/M
3300022190|Ga0181354_1154949Not Available714Open in IMG/M
3300022190|Ga0181354_1158126Not Available704Open in IMG/M
3300022190|Ga0181354_1173707Not Available660Open in IMG/M
3300022190|Ga0181354_1178754Not Available646Open in IMG/M
3300022190|Ga0181354_1233472Not Available532Open in IMG/M
3300022407|Ga0181351_1014440All Organisms → Viruses → Predicted Viral3273Open in IMG/M
3300022407|Ga0181351_1060509Not Available1558Open in IMG/M
3300022407|Ga0181351_1220911Not Available615Open in IMG/M
3300022752|Ga0214917_10167939Not Available1131Open in IMG/M
3300023184|Ga0214919_10004932Not Available19183Open in IMG/M
3300025075|Ga0209615_101817Not Available1409Open in IMG/M
3300027734|Ga0209087_1007006Not Available5960Open in IMG/M
3300027734|Ga0209087_1016313All Organisms → Viruses → Predicted Viral3704Open in IMG/M
3300027744|Ga0209355_1106829Not Available1255Open in IMG/M
3300027749|Ga0209084_1000462All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage38248Open in IMG/M
3300027754|Ga0209596_1261996Not Available704Open in IMG/M
3300027754|Ga0209596_1334270All Organisms → cellular organisms → Bacteria → Proteobacteria590Open in IMG/M
3300027763|Ga0209088_10039532All Organisms → Viruses → Predicted Viral2337Open in IMG/M
3300027769|Ga0209770_10217775Not Available749Open in IMG/M
3300027798|Ga0209353_10211725Not Available845Open in IMG/M
3300027798|Ga0209353_10316324All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae658Open in IMG/M
3300027808|Ga0209354_10036951All Organisms → Viruses → Predicted Viral1959Open in IMG/M
3300027808|Ga0209354_10055954All Organisms → Viruses → Predicted Viral1592Open in IMG/M
3300028394|Ga0304730_1274129Not Available595Open in IMG/M
3300031707|Ga0315291_10489149All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1145Open in IMG/M
3300032050|Ga0315906_10987378Not Available635Open in IMG/M
3300032053|Ga0315284_11255686Not Available808Open in IMG/M
3300033233|Ga0334722_10601548Not Available785Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake56.90%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake20.69%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.59%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.59%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.72%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.72%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.86%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.86%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.86%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.86%
MarineEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine0.86%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.86%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.86%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002142M2t3t2 FKB2 (115f)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300004126Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)EnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009194Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RTEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300011115Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016MayEnvironmentalOpen in IMG/M
3300011339Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - HannamEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013286Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23YEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017700Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.DEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019783Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025075Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - 4B3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027744Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300028394Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
M2t2FKB2_135542023300002142MarineMKTEPELIDIYAMFALMGLMQKPIKGKSKIDVAYEAFEQAQAMVEVREDFINKRSD*WKL
JGI25908J49247_1005757523300003277Freshwater LakeMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMLDVREDFINKGGD*
JGI25908J49247_1007168143300003277Freshwater LakeMKTEPDLIDIIAMFALVGLMQKPSKALKSKIDIAYEAYEQAQAMMDVRGDFMDKRSD*
JGI25909J50240_104338343300003393Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFVNKGGD*
Ga0066179_1005401443300004126Freshwater LakeIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFVNKGGD*
Ga0049082_1024942733300005584Freshwater LenticMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMMDVREDFVNKGGD*
Ga0049082_1024993713300005584Freshwater LenticMKTEPQLIDIYAMFALMVLMQKPHKTAKSKIDIAYEAFEQAQTMMDVREDFVKEGGK*
Ga0078894_10000078733300005662Freshwater LakeMKTEPELIDIYAMFALMALMQKPSKVAKSKIDVAYEAYEQAQAMLDVREDFVNKRGD*
Ga0104986_1928563300007734FreshwaterMNEPELLDIFAMFALTALMQKTSKVAKSKIDIGYEAYEQAQAMMDVRKDFIKKLEK*
Ga0105746_136215413300007973Estuary WaterMKNEPELIDIYAVFALLALMQKPVKGRSEIELAYQAFEQAQAMLTVRDEFVWRNDD*
Ga0108970_1122891443300008055EstuaryMKTEPDLIDIYAMFALMGLMQKPAKGRSKIDVAYEAFEQAQAMLDVREDFMDKRGD*
Ga0114363_108174263300008266Freshwater, PlanktonMKTEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVRDDFVNKRGD*
Ga0114876_1000891213300008448Freshwater LakeMKTEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVREDFVNKRGD*
Ga0114973_1021816343300009068Freshwater LakeMTEEPELIDIYAMFILMGLMQKPVQGRSRVDIAYEAFEQARAMIDVREDFIKERRK*
Ga0114973_1061999023300009068Freshwater LakeMKTEPNLIDIFAMLALIGLLQKPSKVLKSKIDIAYEAYEQAQAMLDVREDFINKGGD*
Ga0114962_10000734183300009151Freshwater LakeMKTEPELIDIYAMFALMALMQKTTKTKSKIDTAYEAFEQAQAMIEVRADFIERKE*
Ga0114980_10000443343300009152Freshwater LakeMNTEPELIDLYAMFALMMQKPVKGKSKIDVAYEAFEQAYAMIEIREDFVEKRKKKEKE*
Ga0114980_10003391233300009152Freshwater LakeMTEEPELIDIYAMFILMGLVQKPVQGRSRVDIAYEAFEQARAMVDVREDFIKERRK*
Ga0114980_1048626333300009152Freshwater LakeMKTEPELIDIYAMFALMALMQKPHKVSKSKIDIAYEAFEQARAMIEVREDFVNEGEKNV*
Ga0114980_1075351113300009152Freshwater LakeMKTEPDLIDIFAMLALIGLMQKPTKVAKSKIDIAYEAYEQAQAMLDVREDFINKRSD*
Ga0114968_1004360343300009155Freshwater LakeMKTEPELIDIFAMFALDRLKPVKGMSKIDVAYEAYEQAQAMMEVREDFIKKRSE*
Ga0114968_1013747113300009155Freshwater LakeMKTEPDLIDIIAMLVLPALIQKQSKVAKSKIDIAYEAYEQAQAMLDVREDFIDKRSD*
Ga0114968_1059853113300009155Freshwater LakeQRKRKESHMKTEPNLIDIFAMLALIGLLQKPSKVLKSKIDIAYEAYEQAQAMLDVREDFINKGGD*
Ga0114977_1034168923300009158Freshwater LakeMKTEPELIDIYAMFALMALMQKATKTKSKIDTAYEAFEQARAMIEVRADFIERKE*
Ga0114977_1062976333300009158Freshwater LakeMKTEPELIDIFAMFALDRLKPVKGMSKIDVAYEAYEQAQAMMEVREDFINKRSE*
Ga0114981_1001994183300009160Freshwater LakeMTEEPELIDIYAMFILMGSVQKPVQGRSRVDIAYEAFEQARAMVDVREDFIKERRK*
Ga0114970_1075486313300009163Freshwater LakeAVPCRERSQMKTEPDLIDIIAMLVLPALIQKQSKVAKSKIDIAYEAYEQAQAMLDVREDFIDKRSD*
Ga0114975_1047260833300009164Freshwater LakeMKTVPELIDIYAMFALMALMQKPHKVSKSKIDIAYEAFEQARAMIEVREDFVNEGEKNV*
Ga0114969_1062749723300009181Freshwater LakeMNTEPELIDLYAMFALMMQKSVKGRSKIDAAYEAFEQAQAMIDVREDFVEKRKKKEKE*
Ga0114983_107308633300009194Deep SubsurfaceMKTEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVREDFVNKRSD*
Ga0133913_1235284553300010885Freshwater LakeMKTEPDLIDIYAMFALMGLMQKPIKGKSKIDIAYEAFEQARAMIDVREDFVNKGGD*
Ga0139557_100373443300011010FreshwaterMKTEPDLIDIYAMFALIALMQKPVKTKSKIDIAYEAFEQAQAMIDVREDFIKKGGD*
Ga0151514_10202353300011115FreshwaterMKTEPELIDIFAMFALDRLKPVKGMSKIDVAYEAYEQAQAMMEVREDFINKRNE*
Ga0153700_10304193300011339FreshwaterMKTEPDLIDIYAMFALMAVMQKHAKVAKSKIDIAYEAFEQAKAMMEVREDFVRERSE*
Ga0164294_1068020633300013006FreshwaterMKTEPELIDIFAMFALDRLKLVKGMSKIDVAYEAYEQAQAMMEVREDFIKKRSE*
Ga0164294_1095995933300013006FreshwaterMKTEPDLIDIYAMFALMGLMQKPIKGKSKIDIAYEAFEQAQAMVEVREDFMDKRGD*
Ga0136641_102222943300013286FreshwaterMKTEPELIDIYAMFALMALMQKPLKKSKIDLAYEAFEQAQAMLEVRSDFIKKGK*
Ga0182021_1113185353300014502FenGMKTEPELIDIYAMFALMALMQKPLKTKSKIDLAYEAFEQAQAMLEVRSDFIKKGK*
Ga0181338_100125833300015050Freshwater LakeMKTEPDLIDIYAMFALIALMQKPVKTKSKIDIAYEAFEQAQAMIDVREDFIKKRSD*
Ga0181338_100170783300015050Freshwater LakeMNVEPDLIDIYAMFALMGLMQKPIKAGKTKIDIAYEAFEQAQTMIDVRKDFIKEGGG*
Ga0181338_1001931103300015050Freshwater LakeMKNEPDLIDIIAMFALVGLMQKPSKALKSKIDIAYEAYEQAQAMMDVREDFMDKRSD*
Ga0181338_100392063300015050Freshwater LakeMKTEPELIDIYAMFALMAVMQKHAKVAKSKIDIAYEAFEQAKAMMEVREDFVRERSE*
Ga0181338_100453183300015050Freshwater LakeMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFINKGGD*
Ga0181338_100556133300015050Freshwater LakeMKTEPDLIDIIAMLALIGLMQKTSKAPKTKIDIAYEAYEQAQAMLDVREDFIHRRGD*
Ga0181338_101197733300015050Freshwater LakeMNTEPELIDLYAMFALMMQKPVKGRSKIDAAYEAFEQAQAMIDVREDFVNERKKNV*
Ga0181338_101635813300015050Freshwater LakeEPELIDIYAMFALMALMQKTSKVARSKIDVAYEAFEQAKAMIEVREDFLQKGETNV*
Ga0181338_102002833300015050Freshwater LakeMKTEPDLIDIYAMFALMALMQKPVKTKSKIDIAYEAFEQAQAMIEVREDFVRERSK*
Ga0181339_100182943300017700Freshwater LakeMKTEPELIDIYAMFALMAVMQKHAKVAKSKIDIAYEEFEQAKAMMEVREDFVREGSE
Ga0181339_101599213300017700Freshwater LakeMKTEPDLIDIFAMLALIGILQKPSKALKSKIDIAYEAYEQAQAMVDVRED
Ga0181339_102014233300017700Freshwater LakeMKSEPELIDIYAMFALMVLMQKPHKTAKSKIDIAYEAFEQAQTMMDVREDFVKEGGK
Ga0181339_102719113300017700Freshwater LakeMKTEPELIDIYAMFALIALMQKTSKVARSKIDVAYEAFEQAKAMIEVREDFLQKGETNV
Ga0181339_102901233300017700Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMMDVREDFVNKGGD
Ga0181350_100489283300017716Freshwater LakeMKTEPELIDIFAMFALDRLKPVKGMSKIDVAYEAYEQAQAMMEVREDFINKRSE
Ga0181350_100651453300017716Freshwater LakeMKTEPDLIDIIAMLALIGLMQKTSKAPKTKIDIAYEAYEQAQAMLDVREDFIHRRGD
Ga0181350_102503413300017716Freshwater LakeQMKTEPELIDIYAMFIVMGLMQKPIKGKSKIDVAYEAFEQAQAMVDVREDFVKKRSD
Ga0181350_104248553300017716Freshwater LakeMKTEPELIDIYAMFALMALMQKPTKLAKSKIDVAYEAFEQAKAMIEVREDFLHRGEINV
Ga0181350_115267213300017716Freshwater LakeARLRHAVHQTKRKELHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFVNKRGDXWMHF
Ga0181347_100157163300017722Freshwater LakeMKTEPDLIDIFAMLAMIGLLQKPSKALKSKIDIAYEAYEQAQAMLDVREDFINKGGD
Ga0181347_105200043300017722Freshwater LakeIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFVNKGGD
Ga0181347_118299413300017722Freshwater LakeLIDIYAMFALMGLMQKPVKGKSKIDVAYEAFEQAQAMVEVREDFMDKRGE
Ga0181365_109958833300017736Freshwater LakeRHAVHQTKRKELHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVEVREDFINKGGD
Ga0181352_104061543300017747Freshwater LakeMKSEPELIDIYAMFALMALMQKPTKVAKSKIDVAYEAYEQAQAMLDVREDFMDKRSD
Ga0181352_115608513300017747Freshwater LakeMKNEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVREDFVNKRGD
Ga0181344_102784353300017754Freshwater LakeMKTEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVREDFMDKRRD
Ga0181344_105589813300017754Freshwater LakePDLIDIYAMFALMGLMQKPTKGRSKIDVAYEAFEQAQAMVEVREDFVNKRGD
Ga0181344_116180133300017754Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPIKGKSKIDVAYEAFEQAQAMVDVREDFINKRSD
Ga0181343_106933713300017766Freshwater LakeMKTEPDLIDIIAMFALVGLMQKPSKALKSKIDIAYEAYEQAQAMMDVRGD
Ga0181358_122051613300017774Freshwater LakeLIDIIAMLALIGLMQKTSKVPKTKIDIAYEAYEQAQAMLDVREDFIHRRGD
Ga0181357_123345323300017777Freshwater LakeMKTEPDLIDIIAMFALVGLMQKPSQALKSKMDIAYEAYEQAQAMMDVRGDFMDKRSD
Ga0181349_107932063300017778Freshwater LakeARLRHAVHQTKRKELHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFVNKRGD
Ga0181349_113655813300017778Freshwater LakeIPQRKRKESHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFINKGGD
Ga0181346_1001930103300017780Freshwater LakeMNVEPYLIDIYAMFALMGLMQKPIKAGKTKIDIAYEAFEQAQTMIDVRKDFIKEGGG
Ga0181346_105945043300017780Freshwater LakeMKTEPDLIDIIAMLALIGLMQKTSKVPKTKIDIAYEAYEQAQAMLDVREDFIHRRGD
Ga0181346_108225233300017780Freshwater LakeMKTEPELIDIYAMFALMAVMQKHAKVAKSKIDIAYEAFEQAKAMMEVREDFVREGSEGWIRF
Ga0181355_127578033300017785Freshwater LakeKRKESHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFINKGGD
Ga0181361_11025033300019783Freshwater LakeMKTEPQLIDIYAMFALMVLMQKPHKTAKSKIDIAYEAFEQAQTMMDVREDFVKEGGK
Ga0181361_11251523300019783Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFVNKGGD
Ga0181359_100190533300019784Freshwater LakeMKTEPDLIDIYAMFALIALMQKPVKTKSKIDIAYEAFEQAQAMIDVREDFIKKRSD
Ga0181359_100266473300019784Freshwater LakeMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMLDVREDFINKGGD
Ga0181359_103944253300019784Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPIKGKSKIDVAYEAFEQAQAMVDVREDFVKKRSD
Ga0181359_103997063300019784Freshwater LakeMNVEPDLIDIYAMFALMGLMQKPIKAGKTKIDIAYEAFEQAQTMIDVRKDFIKEGGG
Ga0181359_108225143300019784Freshwater LakeMTEEPELIDIYAMFILMGLVQKPVQGRSRVDIAYEAFEQARAMVDVREDFIKERRK
Ga0181359_110799043300019784Freshwater LakeMKTEPELIDIYAMFALMAVMQKHAKVAKSKIDIAYEAFEQAKAMMEVREDFVREGSE
Ga0181359_113614233300019784Freshwater LakeMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFVNKGGD
Ga0207193_102159783300020048Freshwater Lake SedimentMKTEPELIDIYAMFALMALMQKPSKVAKSKIDVAYEAYEQAQAMLDVREDFMDKRSD
Ga0222714_1010808633300021961Estuarine WaterMNEPELLDIFAMFALTALMQKTSKIAKSKIDIGYEAYEQAQAMMDVRKDFIKKLEK
Ga0222712_1007193663300021963Estuarine WaterMKTEPELIDIYAMFALMALMQKPSKVAKSKIDVAYEAYEQAQAMLDVREDFMDKRGD
Ga0181354_110630853300022190Freshwater LakeDEPDLIDIIAMFALVGLMQKPSKALKSKIDIAYEAYEQAQAMMDVREDFMDKRSD
Ga0181354_115494923300022190Freshwater LakeMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFINKGGD
Ga0181354_115812643300022190Freshwater LakeMKTEPDLIDIIAMLALIGLMQKTSKVAKSKIDIAYEAYEQAQAMLDVREDFIDRRGS
Ga0181354_117370713300022190Freshwater LakeRRKESHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFINKGGD
Ga0181354_117875413300022190Freshwater LakeKRKEQKMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFVNKGGD
Ga0181354_123347213300022190Freshwater LakeMKTEPELIDIYAMFALMAVMQKHAKVAKSKIDIAYEAFEQAKAMMEVREDFVREGS
Ga0181351_101444063300022407Freshwater LakeMKNEPDLIDIIAMFALVGLMQKPSKALKSKIDIAYEAYEQAQAMMDVREDFMDKRSD
Ga0181351_106050933300022407Freshwater LakeMKTEPDLIDIIAMFALVGLMQKPSKALKSKIDIAYEAYEQAQAMMDVRGDFMDKRSD
Ga0181351_122091143300022407Freshwater LakeTEPDLIDIYAMFALMGLMQKPAKGRSKIDVAYEAFEQAQAMLDVREDFMDKRGD
Ga0214917_1016793953300022752FreshwaterMKTEPELIDIFAMFALDRLKPVKGMSKIDVAYEAYEQAQAMMEVREDFINKRNE
Ga0214919_10004932183300023184FreshwaterMNTEPELIDLYAMFALMMQKPVKGRSKIDAAYEAFEQAQAMMDVREDFMDKRSD
Ga0209615_10181733300025075FreshwaterMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMVDVREDFVNKRGD
Ga0209087_100700693300027734Freshwater LakeMKTEPDLIDIFAMLALIGLMQKPTKVAKSKIDIAYEAYEQAQAMLDVREDFINKRSD
Ga0209087_101631363300027734Freshwater LakeMKTEPELIDIYAMFALMALMQKATKTKSKIDTAYEAFEQARAMIEVRADFIERKE
Ga0209355_110682923300027744Freshwater LakeMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMMDVREDFVNKGGD
Ga0209084_1000462433300027749Freshwater LakeMKTEPELIDIYAMFALMALMQKTTKTKSKIDTAYEAFEQAQAMIEVRADFIERKE
Ga0209596_126199623300027754Freshwater LakeMKTEPNLIDIFAMLALIGLLQKPSKVLKSKIDIAYEAYEQAQAMLDVREDFINKGGD
Ga0209596_133427023300027754Freshwater LakeMNTEPELIDLYAMFALMMQKSVKGRSKIDAAYEAFEQAQAMIDVREDFVEKRKKKEKE
Ga0209088_1003953253300027763Freshwater LakeMNTEPELIDLYAMFALMMQKPVKGKSKIDVAYEAFEQAYAMIEIREDFVEKRKKKEKE
Ga0209770_1021777523300027769Freshwater LakeMKTEPELIDIYAMFALMALMQKPSKVAKSKIDVAYEAYEQAQAMLDVREDFVNKRGD
Ga0209353_1021172513300027798Freshwater LakeMNVEPDLIDIYAMFALMGLMQKPIKAGKTKIDIAYEAFEQAQTMIDVRKDFIKEGG
Ga0209353_1031632413300027798Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFVNKGG
Ga0209354_1003695163300027808Freshwater LakePCHAIPQRKRKESHMKTEPDLIDIFAMLALIGLLQKPSKALKSKIDIAYEAYEQAQAMLDVREDFINKGGD
Ga0209354_1005595453300027808Freshwater LakeMKTEPELIDIYAMFIVMGLMQKPHKTAKSKIDIAYEAYEQAQAMVDVREDFV
Ga0304730_127412933300028394Freshwater LakeQMKTEPDLIDIIAMLVLPALIQKQSKVAKSKIDIAYEAYEQAQAMLDVREDFIDKRSD
Ga0315291_1048914943300031707SedimentMNTEPELIDLYAMFALMMQKPVKGRSKIDAAYEAFELAQAMIDVREDFVNERKKNV
Ga0315906_1098737833300032050FreshwaterKTEPDLIDIYAMFALMGLMQKPVKGKSKIDIAYEAFEQAQAMVEVREDFVNKRGD
Ga0315284_1125568613300032053SedimentMKTEPELIDIFAMFIAMAIKQKLKVTKSNIDVAYEAYEQAQAMIDVRKDFINKGGD
Ga0334722_1060154823300033233SedimentMKTEPELIDIFAMFALDRLKPVKGMSKIDVAYEAYEQAQAMMEVREDFINKKSE


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