Metagenome / Metatranscriptome Family F078199

Overview

Basic Information

• Family ID: F078199
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 116
• Average Sequence Length: 42 residues
• Representative Sequence: MLGYDFEIIYKKGKQNVVADALSRKDEDVEALLCAISII
• Number of Associated Samples: 24
• Number of Associated Scaffolds: 115

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 18.97 %
• % of genes near scaffold ends (potentially truncated): 36.21 %
• % of genes from short scaffolds (< 2000 bps): 72.41 %
• Associated GOLD sequencing projects: 24
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (43.103 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room (38.793 % of family members)
• Environment Ontology (ENVO): Unclassified (82.759 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Surface (non-saline) (38.793 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 53.73%
  β-sheet: 0.00%
  Coil/Unstructured: 46.27%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00078	RVT_1	5.22
PF00665	rve	2.61
PF00450	Peptidase_S10	1.74
PF00385	Chromo	0.87
PF07727	RVT_2	0.87
PF13041	PPR_2	0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.61
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.61
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.61
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.61
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	1.74

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.90 %
Unclassified	root	N/A	43.10 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.90 %
Unclassified	root	N/A	43.10 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.17 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	26.72 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	25.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.86 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	25.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	21.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.59 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.86 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	21.55 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	18.10 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	2.59 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.86 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	21.55 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	18.10 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	2.59 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.86 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae	21.55 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	9.48 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	2.59 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.86 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus	21.55 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	9.48 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.86 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	9.48 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.86 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	8.62 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Acrogymnospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	6.03 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Pinopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	6.03 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Pinidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 14

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	6.03 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Conifers I	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 15

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	6.03 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Pinales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 16

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	6.03 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Pinaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
rosids incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis	3.45 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	2.59 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Picea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 18

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Vitales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales	3.45 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Fagales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales	1.72 %
Rosales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales	0.86 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 19

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Vitaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae	3.45 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Fagaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae	1.72 %
Rosaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales → Rosaceae	0.86 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 20

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Viteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae	3.45 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Fagus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Fagus	0.86 %
Rosaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales → Rosaceae	0.86 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 21

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Vitis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis	3.45 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Fagus sylvatica	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Fagus → Fagus sylvatica	0.86 %
Rosaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales → Rosaceae	0.86 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Level 22

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.10 %
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	21.55 %
Vitis vinifera	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	3.45 %
Acinetobacter johnsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	2.59 %
Fagus sylvatica	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Fagus → Fagus sylvatica	0.86 %
Rosaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales → Rosaceae	0.86 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	0.86 %
Bacteroides uniformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	0.86 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300008832|Ga0103951_10019059	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1932
3300009633|Ga0116129_1157138	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	647
3300009853|Ga0118741_1000526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	1650
3300009853|Ga0118741_1000707	Not Available	1491
3300009853|Ga0118741_1003508	Not Available	915
3300009853|Ga0118741_1008893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	721
3300009853|Ga0118741_1008992	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	718
3300009853|Ga0118741_1009427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	710
3300009853|Ga0118741_1011141	Not Available	682
3300009853|Ga0118741_1012465	All Organisms → cellular organisms → Bacteria	664
3300009853|Ga0118741_1012593	Not Available	662
3300009853|Ga0118741_1016060	Not Available	624
3300009853|Ga0118741_1018622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	601
3300009853|Ga0118741_1018643	Not Available	601
3300009853|Ga0118741_1024678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	559
3300009853|Ga0118741_1027463	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	544
3300009853|Ga0118741_1027739	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	542
3300009853|Ga0118741_1028237	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	539
3300012084|Ga0153934_1053643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	629
3300012084|Ga0153934_1061849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	605
3300012084|Ga0153934_1093837	Not Available	540
3300013862|Ga0181459_101346	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5214
3300013864|Ga0181472_107555	Not Available	1431
3300013864|Ga0181472_107704	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales → Rosaceae	1395
3300013865|Ga0181471_100077	Not Available	24428
3300013865|Ga0181471_115187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	516
3300013866|Ga0181473_101415	All Organisms → cellular organisms → Bacteria	6870
3300013866|Ga0181473_101415	All Organisms → cellular organisms → Bacteria	6870
3300013866|Ga0181473_101660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	6441
3300013866|Ga0181473_102288	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5466
3300013866|Ga0181473_103680	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	4064
3300013866|Ga0181473_105294	Not Available	2855
3300013866|Ga0181473_110378	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1168
3300013866|Ga0181473_110597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	1137
3300013866|Ga0181473_115937	Not Available	666
3300013868|Ga0181469_101623	Not Available	8225
3300013868|Ga0181469_102629	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis	5853
3300013868|Ga0181469_105609	Not Available	2468
3300013868|Ga0181469_111194	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1113
3300013870|Ga0181465_102920	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5949
3300013870|Ga0181465_105332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	2947
3300013870|Ga0181465_114508	Not Available	917
3300013870|Ga0181465_116589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	802
3300013872|Ga0181463_1000390	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	12158
3300013872|Ga0181463_1001784	Not Available	6013
3300013872|Ga0181463_1006195	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	2280
3300013872|Ga0181463_1043111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	515
3300013873|Ga0181464_1000344	All Organisms → cellular organisms → Bacteria	18887
3300013873|Ga0181464_1001153	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	12984
3300013873|Ga0181464_1001607	Not Available	11350
3300013873|Ga0181464_1001984	All Organisms → cellular organisms → Bacteria	10292
3300013873|Ga0181464_1002157	Not Available	9875
3300013873|Ga0181464_1002914	Not Available	8290
3300013873|Ga0181464_1003824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	6948
3300013873|Ga0181464_1006271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	4666
3300013873|Ga0181464_1006410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	4581
3300013873|Ga0181464_1008840	Not Available	3363
3300013873|Ga0181464_1012584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	2369
3300013873|Ga0181464_1014745	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2028
3300013873|Ga0181464_1021045	Not Available	1436
3300013873|Ga0181464_1028142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	1104
3300013873|Ga0181464_1032547	Not Available	971
3300013873|Ga0181464_1037397	Not Available	865
3300013873|Ga0181464_1047906	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	705
3300014122|Ga0181458_100278	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	5470
3300014122|Ga0181458_101120	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1904
3300020586|Ga0213497_1000118	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	7120
3300020586|Ga0213497_1000281	All Organisms → cellular organisms → Eukaryota	4482
3300020586|Ga0213497_1002178	Not Available	1703
3300020586|Ga0213497_1057572	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Fagus → Fagus sylvatica	532
3300020586|Ga0213497_1067683	Not Available	506
3300020588|Ga0213495_10007228	Not Available	1159
3300020588|Ga0213495_10031427	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	710
3300020588|Ga0213495_10044462	Not Available	640
3300020588|Ga0213495_10053845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	606
3300020588|Ga0213495_10054691	Not Available	603
3300020588|Ga0213495_10072164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	558
3300020588|Ga0213495_10078416	Not Available	545
3300020588|Ga0213495_10102434	Not Available	506
3300020589|Ga0213499_10099292	Not Available	546
3300020590|Ga0213496_10079440	Not Available	524
3300020590|Ga0213496_10083773	Not Available	516
3300020590|Ga0213496_10087182	Not Available	510
3300020590|Ga0213496_10094214	Not Available	500
3300020600|Ga0213498_10040888	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	699
3300020600|Ga0213498_10064826	Not Available	613
3300020600|Ga0213498_10071825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	595
3300020600|Ga0213498_10082443	Not Available	573
3300020600|Ga0213498_10112867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	525
3300020602|Ga0213500_10043300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	796
3300020602|Ga0213500_10135624	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	579
3300020602|Ga0213500_10214297	Not Available	508
3300023280|Ga0255813_11319248	Not Available	699
3300028019|Ga0224573_1012109	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae	659
3300030908|Ga0074005_13782665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	607
3300031708|Ga0310686_100456695	Not Available	552
3300031708|Ga0310686_100729925	Not Available	506
3300031708|Ga0310686_102382137	Not Available	1311
3300031708|Ga0310686_103176093	Not Available	1242
3300031708|Ga0310686_103776009	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	760
3300031708|Ga0310686_104240699	Not Available	583
3300031708|Ga0310686_110335188	Not Available	530
3300031708|Ga0310686_110383755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	611
3300031708|Ga0310686_111782545	Not Available	513
3300031708|Ga0310686_112843559	Not Available	1126
3300031708|Ga0310686_113191047	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	579
3300031708|Ga0310686_113303348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	891
3300031708|Ga0310686_113382199	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	769
3300031708|Ga0310686_113878446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	515
3300031708|Ga0310686_114788513	Not Available	513
3300031708|Ga0310686_115310505	Not Available	513
3300031708|Ga0310686_115483044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter johnsonii	539
3300031708|Ga0310686_116321069	All Organisms → cellular organisms → Bacteria	589
3300031708|Ga0310686_117423249	Not Available	615
3300031708|Ga0310686_118362009	Not Available	557
3300032747|Ga0314712_10027215	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2048

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	39.66%
Environmental	Environmental	34.48%
Host-Associated	Host-Associated	25.86%

Class

Habitat	Taxonomy	Distribution
Built Environment	Engineered → Built Environment	38.79%
Plants	Host-Associated → Plants	23.28%
Terrestrial	Environmental → Terrestrial	18.10%
Aquatic	Environmental → Aquatic	16.38%
Fungi	Host-Associated → Fungi	2.59%
Bioreactor	Engineered → Bioreactor	0.86%

Category

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Built Environment → Unclassified	38.79%
Phylloplane	Host-Associated → Plants → Phylloplane	22.41%
Soil	Environmental → Terrestrial → Soil	18.10%
Marine	Environmental → Aquatic → Marine	15.52%
Mycelium	Host-Associated → Fungi → Mycelium	2.59%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Roots	Host-Associated → Plants → Roots	0.86%
Aerobic	Engineered → Bioreactor → Aerobic	0.86%

Type

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	38.79%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	22.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.10%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%
Unclassified	Engineered → Bioreactor → Aerobic → Unclassified	0.86%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	38.79%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	22.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.24%
Benthic	Environmental → Aquatic → Marine → Oceanic → Benthic	13.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%
Unclassified	Engineered → Bioreactor → Aerobic → Unclassified → Unclassified	0.86%

Habitat

Habitat	Taxonomy	Distribution
Clean Room	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room	38.79%
Leaf	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Leaf	22.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.24%
Wood Falls	Environmental → Aquatic → Marine → Oceanic → Benthic → Wood Falls	13.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.86%
Food Waste	Engineered → Bioreactor → Aerobic → Unclassified → Unclassified → Food Waste	0.86%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300008832	Eukaryotic communities of water collected during the Tara Oceans expedition - TARA_A200000150	Environmental
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental
3300009853	Wood falls microbial communities from Lacaze-Duthiers Canyon, Mediterranean Sea, France - F3EC	Environmental
3300012084	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ018 MetaG	Host-Associated
3300013862	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2P SAF170 SPAdes reassembly	Engineered
3300013864	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - In1P-11 SPAdes reassembly	Engineered
3300013865	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In5p-11 gowning area SPAdes reassembly	Engineered
3300013866	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - In2P-11 SPAdes reassembly	Engineered
3300013868	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2 SAF170 SPAdes reassembly	Engineered
3300013870	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In3-11 gowning area SPAdes reassembly	Engineered
3300013872	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In1-11 gowning area SPAdes reassembly	Engineered
3300013873	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2-11 gowning area SPAdes reassembly	Engineered
3300014122	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In1P SAF170 SPAdes reassembly	Engineered
3300020586	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_3	Host-Associated
3300020588	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_1	Host-Associated
3300020589	Leaf-associated microbial communities from Abies magnifica in Yosemite National Park, California, United States - Redfir_Yose_1	Host-Associated
3300020590	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_2	Host-Associated
3300020600	Leaf-associated microbial communities from Pinus contorta in Yosemite National Park, California, United States - Lodgepole_Yose_4	Host-Associated
3300020602	Leaf-associated microbial communities from Abies magnifica in Yosemite National Park, California, United States - Redfir_Yose_2	Host-Associated
3300023280	Combined Assembly of Gp0238881, Gp0242115	Engineered
3300028019	Spruce roots microbial communities from Bohemian Forest, Czech Republic ? CRU1	Host-Associated
3300030908	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter TCEFA (Eukaryote Community Metatranscriptome)	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300032747	Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Shad11_28May_surf (Eukaryote Community Metatranscriptome)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0103951_100190593	3300008832	Marine	EIIYKKGKQNVVVDALSIKNEDVKVFLYAISIIQQVG*
Ga0116129_11571382	3300009633	Peatland	LGYDFEIVYKKGKQNVVADALSRKDEDVEAFLCAISIIQPD*
Ga0118741_10005262	3300009853	Wood Falls	MLGYGFEIIYKKGKQNVVANALSRKDEDVEALLCAISIILPDWINETREE*
Ga0118741_10007072	3300009853	Wood Falls	MLDYEFQIIYIKGKQNVVVDALSRKDEDVEALFCSISIIQPN*
Ga0118741_10035081	3300009853	Wood Falls	MLGYDFEIIYKKGKQNVVADALSRKDEEVEALYCAIFSIQPD*
Ga0118741_10088932	3300009853	Wood Falls	MLGYDFEIIYKKGKQNVVVDALSRKDEDVEAFLCTISIIQLDWIN*
Ga0118741_10089923	3300009853	Wood Falls	MLGYDFEIIYKKGKQNVVADALSRKDEDVEAFLCAISII
Ga0118741_10094271	3300009853	Wood Falls	YDFEIIYKKGKQNVVVDALSRKDEDVEALLCVISIIQPNWINEAREE*
Ga0118741_10111411	3300009853	Wood Falls	MLGYNFEIIYKKGKQNVVVDALSRKDEDVEALLCAISIIQP
Ga0118741_10124652	3300009853	Wood Falls	MLGYDFEIIYKKGKQNVVADALSRKDEDVEALLCTISIIQ
Ga0118741_10125932	3300009853	Wood Falls	MFGYDFETIYRKGKKNVVTNELSRKDEDVEAFLCTISIIKPD*
Ga0118741_10160601	3300009853	Wood Falls	MLAYDFEIIYKKWKQNVVAYALSRKDEDVEALLCAISIIQPDW
Ga0118741_10186222	3300009853	Wood Falls	MLGYDFEIIYKKWKQNVVADALSRKDEDVEAFLCAISIIQPD*
Ga0118741_10186433	3300009853	Wood Falls	MLGYDFEIIYKKGKKNAIANALSRKDEDVEALFCTISI
Ga0118741_10246781	3300009853	Wood Falls	MLGYDFEIIYKKGKQNVVADALSRKDEAVEALLCAISIIQLD*
Ga0118741_10274632	3300009853	Wood Falls	MLGYEFEIIYKKGKKNVVADALSRKDEDVEAFLCTISIIQPDWINE
Ga0118741_10277392	3300009853	Wood Falls	MLGYDFEIIYKKGKKNVVVDALSRKDEDVEALLCAISIIQPDWIN
Ga0118741_10282372	3300009853	Wood Falls	MLGYDFKIIYKKRKQNVVADALSRKDEDVEAFLCAISIIQP
Ga0153934_10536432	3300012084	Attine Ant Fungus Gardens	MLGYDFDIIYRKGKKNFVVNSLSRKDEDVEALLCAISTIQPD*
Ga0153934_10618492	3300012084	Attine Ant Fungus Gardens	LGYDFEIIYKKGKQNVVVDALSRKDEDVKALLCAISIIQPD*
Ga0153934_10938372	3300012084	Attine Ant Fungus Gardens	MLGYDFEIIYKKGKQNVVADALSRKDEDVEAFFFY
Ga0181459_1013462	3300013862	Clean Room	MLVYDFEIIYKNGKKNIVADALSRKDEDVEEFLSAISIIQPKWMLA*
Ga0181472_1075552	3300013864	Clean Room	MGHKDVGL*HEIIYKKGKKNVVANALSRKDEDVEAFLCSISIIHPD*
Ga0181472_1077042	3300013864	Clean Room	MLGYKFEIIYKRGKQNVVVDALSRKDEDVEAFIGAISIIKP*
Ga0181471_1000778	3300013865	Clean Room	MLGYDFEIIYKEGEKIFVADSLSRKYEDVEAFLCAISIIQLRLDN*
Ga0181471_1151871	3300013865	Clean Room	MLGYDFEIIYKKGKQNVIADALSRKDEEVEAFLCAISIIKPYWII
Ga0181473_1014151	3300013866	Clean Room	MLGYDFDIIYRKGKKDFVANTLSRKDDDVEALFCAISIIP*
Ga0181473_1014153	3300013866	Clean Room	MLGYDFDIIYRKGKKDFVANTLSRKDDDVEALFCAISIIQ*
Ga0181473_1016602	3300013866	Clean Room	MLHYDIGIIYKKGKQNVVADALSRKGEDVEALLCSISII*
Ga0181473_1022881	3300013866	Clean Room	MLGYDFKIIYKEGKKNGVADALSRKDEDVEALLCAISIIQPDWINE*
Ga0181473_1036805	3300013866	Clean Room	MLGYDFEIIYKKGKQIVVADALTRKDEDVEVLLCTISIIKLNWIN*
Ga0181473_1052941	3300013866	Clean Room	MDYDFEIIYKKGKKNVVTDALSRKDEDVKAFFCAISII*
Ga0181473_1103783	3300013866	Clean Room	MLGYDFEIIYKKGKQNVVAYALSRKDEDVEAFLFIISII*
Ga0181473_1105973	3300013866	Clean Room	MLGYDFEIIYKKGKKNVVADALSSQDEDVEALLCTISIIQPDWINEARE*
Ga0181473_1159371	3300013866	Clean Room	MLYYDFEIIYRKGKKIFIADALSRKNEDVEALFCVISIIQLD*
Ga0181469_1016236	3300013868	Clean Room	MLGYDFDIIYRKGKKIFVADALSRKDEDVEEMFCAISII*
Ga0181469_1026296	3300013868	Clean Room	MLGYDFDIIYKKWKKIFVVDALSRKNEDVEALFCGISII*
Ga0181469_1056095	3300013868	Clean Room	MLGYDFDIIYRKGKQKFVVDALSRKDEDVEALFCAISIIQPIG*
Ga0181469_1111942	3300013868	Clean Room	MLGYYFEIIYKKGKKNVVADALSRKDEDVEAFLCAISIIQPDWIN*
Ga0181465_1029206	3300013870	Clean Room	MLVHDFEIIYKKGKQNVVEDALSRRDEDVEVLFCAISNIKPDWITKARYE*
Ga0181465_1053324	3300013870	Clean Room	MLGYDFEIIYKKGKKIFVADALSRKDEDVEGFVYSISII*
Ga0181465_1145082	3300013870	Clean Room	YDFEIIYKKGKQNVVADTLSRKDEDVEALLCAISIIQPD*
Ga0181465_1165891	3300013870	Clean Room	KMLGYDFEIIYKKGKQNVVADALSRKDEDVEALLCTISIIQPG*
Ga0181463_10003906	3300013872	Clean Room	LFKNILGYGFEIIYKKGKQNVVADALSRKDEDVEEYFCATSSIQPDWIN*
Ga0181463_10017843	3300013872	Clean Room	MFGYDFEIIYKKGKKNVVEDALSRKDEDVEALFYAISIIQRD*
Ga0181463_10061952	3300013872	Clean Room	MLGYEFEIIYKKWKKNVVTNALSRKDENVEEFFCVISIIQP*
Ga0181463_10431111	3300013872	Clean Room	KMLGYYFEIIYKKGKKIFVADALSRKDEDVEALLCAISIIQTD*
Ga0181464_10003442	3300013873	Clean Room	MLGYDFEIFYKKGKKNMVADALSRKYEAMEALLCAISIIQPD*
Ga0181464_100115315	3300013873	Clean Room	MLGYEFEIIYKKGKKNVVADALSRKDEDMEALLCAISII*
Ga0181464_100160710	3300013873	Clean Room	MFGYDFEIIYKKGKQNVVFDALSRRDEDVEALICVISIIQPDWIIEARDE*
Ga0181464_10019842	3300013873	Clean Room	MLGYEFEIIYKRGKKNVVVYALSRSDEDVEAFLCVVFII*
Ga0181464_10021576	3300013873	Clean Room	MLGYDFEIIHKKGKKNVVVDALLRKDEDVDALTYVIFIVQPDWITKARG*
Ga0181464_100291411	3300013873	Clean Room	MLGYDFGIIYKKGKQDVMANALSRKDEDVEELFCVISIIQPVG*
Ga0181464_10038249	3300013873	Clean Room	EIIYKKWKQNVVADALSRKDEDVETLFSAISIIQPD*
Ga0181464_10062713	3300013873	Clean Room	MSGYDFEVIYKKGKQNVVLAALSRKDKVMEALLCVISIIQPD*
Ga0181464_10064101	3300013873	Clean Room	MLGYDFEIIYKKGKQNVVANLLSRMDEDVEESFFCYFYYPTRLDK*
Ga0181464_10088401	3300013873	Clean Room	MSSYEFEIIYEKWKKNIVANALSRKDEVVEAFLHVISIT*
Ga0181464_10125843	3300013873	Clean Room	MLGYDFEIIYKKGKKNVVADALSRKDEDVEDFLCTISII*
Ga0181464_10147452	3300013873	Clean Room	MLGYDFEIIYKKGKKNVAVNALSRNDEDVEALFYVISISQPY*
Ga0181464_10210452	3300013873	Clean Room	MLGYDFEIIYKEGKIFFFANALSRKDEDVEALICAIYII*
Ga0181464_10281423	3300013873	Clean Room	MLGYDFEIIYKKGKQNVVADALSRKDEDVEALLCAIYYPTRLDK*
Ga0181464_10325471	3300013873	Clean Room	MLGYDFEIIYKKGKQNVVSNALSRKDEDVEALFCAISIIQPD*
Ga0181464_10373972	3300013873	Clean Room	MLGYDFEIIYKKGKKNVVADALSRKDEDVEGLLCAISIIQLD*
Ga0181464_10479062	3300013873	Clean Room	MLGYDFEIIYKKGKQNFVADVLSRKDKDVEAFICVISII*
Ga0181458_1002785	3300014122	Clean Room	MLGYDFEIIYKKGKQNVVADALSRKDEDVEALLCAISII*
Ga0181458_1011205	3300014122	Clean Room	MGLLGYEFEIIYKKWKKNVVANAISRKDEDVEALLCAISII*
Ga0213497_10001184	3300020586	Leaf	MFGYDFEIIYKKGKQNVVADALSRKDEDVEALLCAISIIQPD
Ga0213497_10002811	3300020586	Leaf	VTKMLVYDFEIIYKKGKQNVVADALSRKDEDVEALLCTISIIQPD
Ga0213497_10021781	3300020586	Leaf	MLGYDFEIIYKIGKQNFVADALSRKDEDVEALLCVISIIQLD
Ga0213497_10575721	3300020586	Leaf	MLCYDFKIIYKKGKQNVVADALSRKDEDVEALFCAISIIQPDWINE
Ga0213497_10676832	3300020586	Leaf	MLGYDFEIIYKKWKKDVVADALSRRDEDVEAFLYAISIIQPD
Ga0213495_100072282	3300020588	Leaf	MLGYDFEIIYKKGKKNVVAAALSRKDEDVEPFLCSILSYNRIG
Ga0213495_100314271	3300020588	Leaf	MLGYDFEIIYKRGKQNVVADALSRKDDDAEALFCAISIIQPD
Ga0213495_100444622	3300020588	Leaf	MLGYDFEIIYKYGKQNVVADALSRKDEDVEALLCVISIIQPD
Ga0213495_100538451	3300020588	Leaf	MLGYDFEIIYKKGKQNVIANALSRKDEDVEALLCTIYIIQSDWINKARDE
Ga0213495_100546912	3300020588	Leaf	MLGYDFEIIYKTGKQNVVVDALSRKDEDVEALLCASSTIQPDW
Ga0213495_100721641	3300020588	Leaf	MLGYEFEIIYKKWKQNVVADALSRRDEDAKELLCAISIIQPD
Ga0213495_100784161	3300020588	Leaf	WVTNMLGYDFEIIYKKGKKNFVADALSRKDEDVETLFCVISIIQPY
Ga0213495_101024341	3300020588	Leaf	MLGYDFEIIYKKGKKNVVVDALSRKDEDVEAFLCAISIIQ
Ga0213499_100992921	3300020589	Leaf	QKWVICMLGHGFEVIYKKWKQNVVAEAPSRKDEDIGGLLCVISIP
Ga0213496_100794401	3300020590	Leaf	MLGYEFDTIYRKGKQNFVANELSRNNEDVEALFCAISIIQPD
Ga0213496_100837731	3300020590	Leaf	MLYYDFEIIYKKGKQNVVAGALSRKDEDVESLFCVISIIKPDWINESRD
Ga0213496_100871821	3300020590	Leaf	MLGYDFEIIYKKGKKNVVANALSRKDEHLEALLCTI
Ga0213496_100942141	3300020590	Leaf	GPKMLGHEFEIIYKKGQQNVVAYALLGSDEDVEALLCSISIIQLVWIT
Ga0213498_100408883	3300020600	Leaf	MLGYDFEIIYKKGKQNVVADALSRKDEDVEALLCAI
Ga0213498_100648263	3300020600	Leaf	MLGYDFEIICKIREPNVVADALSRRDEDVESLFCV
Ga0213498_100718251	3300020600	Leaf	MLGYDFDIIYRKWKKNFVANALLRKDEDVEALFYSISIIPP
Ga0213498_100824431	3300020600	Leaf	MLGYFFEIIYKRGKKNFVADALSRKDEDVEALFCVISIIQL
Ga0213498_101128671	3300020600	Leaf	MLVYVFEIIYKKGTKNVVVDALSRKDKDVEAFQLSNLIG
Ga0213500_100433001	3300020602	Leaf	MLGYDFEIIYKKEKHNLVAYTLSKKNEDVGGLLCAISLP
Ga0213500_101356243	3300020602	Leaf	MLGYDFEIIYKKGKQNLVAYALSRKHEDIEGFLCAIS
Ga0213500_102142972	3300020602	Leaf	MLGYDFEIIYNKGKQNVVANALLRKHEDIEGFLYAISLPQS
Ga0255813_113192481	3300023280	Food Waste	VGTLNYDFEIIYKKGKINVVVNALLIKDEEMEGFLCAI
Ga0224573_10121091	3300028019	Roots	LGYDFEIVYIKGKQNVVADALSRKEEDVEAFLCAISIIQPNWIIEA
Ga0074005_137826651	3300030908	Soil	GYDFEIIYKKKKQNVVADALSKKKDEDVEALVCVISIIQPDWINETREE
Ga0310686_1004566951	3300031708	Soil	MLGYDFEIIYKKGNKNVVANELSRMDEYVEAFLCVISIIQPDWII
Ga0310686_1007299251	3300031708	Soil	MLSHEFDIIYKKXKQNVVADALSRKEDDTEGLLCVISILEYD
Ga0310686_1023821372	3300031708	Soil	MLGYEFEIIHKKDKENVVENALSRKEDGNETLFFVIST
Ga0310686_1031760934	3300031708	Soil	MLGYDFEIIYKKGNQNVVENSLSIKDEHFQAFLHAI
Ga0310686_1037760093	3300031708	Soil	LGYDLEIIYKKGKKKVVADALSRQDEDVEAVLCAISIIQP
Ga0310686_1042406992	3300031708	Soil	LGYDFEIVYKKGKQNVVVDALSRKEEDVEAFLYAISIIQPD
Ga0310686_1103351882	3300031708	Soil	LGYDFEILYKKGKQNVVADALSRKDEYVDTFLCAISIIQPDWIIEE
Ga0310686_1103837552	3300031708	Soil	VTKILGYDFEIIYKKGKKNVVAYALSRKDEYVEEFLYVISII
Ga0310686_1117825452	3300031708	Soil	MGNQDIGHDFEIVYKKGKQNVVADALSRKDEDVEAFLCAISIIQPD
Ga0310686_1128435591	3300031708	Soil	MLGYDYEIVCKKGKKNVVVVSLSRQFEDVSFFVCLNLS
Ga0310686_1131910471	3300031708	Soil	MGGQDVGYDFEIIYKKGKQNVVANALSRKDEDVDAFLCAISIIQPD
Ga0310686_1133033481	3300031708	Soil	MLGYDFGIIYKKGKKNVLAHALSRKDEDIEPFLCVISIIQLD
Ga0310686_1133821991	3300031708	Soil	MILSYDFEIIYKKGKQNVVADALSRKDEDVEAFLCGISIIQPDWIIAARD
Ga0310686_1138784462	3300031708	Soil	LGYNFEIIYKKGKKNVVAYALLGNDEYVEAFLFSISVI
Ga0310686_1147885131	3300031708	Soil	MLGYDFEIIYKKGKQNVVAVALSIKDEYFEAFLCAICWITERGG
Ga0310686_1153105051	3300031708	Soil	MLGYDLELIYKEGKQNAVENIALSRKEENTKALLCAISIS
Ga0310686_1154830442	3300031708	Soil	MLGYAFKIIYKKGKQNFVADALSRKDEDVEAFLYVISIIQPDWII
Ga0310686_1163210691	3300031708	Soil	VTKILGYDFEIVYKKGKKNVVADALLRKDEDVEAFLCTISIIQPN
Ga0310686_1174232491	3300031708	Soil	MLGYDFEIIYKKGNKNVVENALSRKDEDVEAFLYAILIIQPDWIIKLRD
Ga0310686_1183620092	3300031708	Soil	MICYDFEIIYKKGKQNVVSDAISRKEEETKGLLCVIYIP
Ga0314712_100272152	3300032747	Seawater	HKLCYDFEIIYKKGKKNVVVDALSRKDEDVKAFLYAISIIQQG