Metagenome / Metatranscriptome Family F077982

Basic Information
Family ID	F077982
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	51 residues
Representative Sequence	AGYFAPRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK
Number of Associated Samples	111
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	99.15 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Bacteria (99.145 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (12.821 % of family members)
Environment Ontology (ENVO)	Unclassified (39.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.171 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.87% β-sheet: 0.00% Coil/Unstructured: 70.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF09587	PGA_cap	95.73
PF00890	FAD_binding_2	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	88.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	88.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	88.03 %
Propylenellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Propylenellaceae	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	88.03 %
Propylenella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Propylenellaceae → Propylenella	0.85 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	88.03 %
Propylenella binzhouense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Propylenellaceae → Propylenella → Propylenella binzhouense	0.85 %
Leucobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	88.03 %
Leucobacter chromiiresistens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter → Leucobacter chromiiresistens	0.85 %
Propylenella binzhouense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Propylenellaceae → Propylenella → Propylenella binzhouense	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17067153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c026313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300000550\|F24TB_10787437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1113	Open in IMG/M
3300000550\|F24TB_10862667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1104	Open in IMG/M
3300000550\|F24TB_12038710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1264	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10031169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1249	Open in IMG/M
3300000955\|JGI1027J12803_100897914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1203	Open in IMG/M
3300001372\|YBBDRAFT_1278759	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300002459\|JGI24751J29686_10069020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300003998\|Ga0055472_10134238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300004009\|Ga0055437_10220079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300004047\|Ga0055499_10089001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300004114\|Ga0062593_101410051	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300004145\|Ga0055489_10075023	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300004148\|Ga0055521_10139021	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300004156\|Ga0062589_101893626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300004463\|Ga0063356_102866008	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300004463\|Ga0063356_104386982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter → Leucobacter chromiiresistens	607	Open in IMG/M
3300005218\|Ga0068996_10084751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300005289\|Ga0065704_10219092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1080	Open in IMG/M
3300005295\|Ga0065707_10777834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300005327\|Ga0070658_10150798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1946	Open in IMG/M
3300005340\|Ga0070689_100577651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	971	Open in IMG/M
3300005343\|Ga0070687_100198453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1214	Open in IMG/M
3300005354\|Ga0070675_100297375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1421	Open in IMG/M
3300005354\|Ga0070675_100972559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300005366\|Ga0070659_101372879	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005367\|Ga0070667_101005609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300005441\|Ga0070700_101348479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300005445\|Ga0070708_102277661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300005458\|Ga0070681_11533269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300005467\|Ga0070706_101549681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300005518\|Ga0070699_101804597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300005563\|Ga0068855_101898818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300005615\|Ga0070702_101866032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300005616\|Ga0068852_102192570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300005713\|Ga0066905_101246562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300005718\|Ga0068866_10394009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	891	Open in IMG/M
3300006572\|Ga0074051_10736280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300006845\|Ga0075421_100452108	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300006846\|Ga0075430_101118996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300006954\|Ga0079219_10562013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300006969\|Ga0075419_10761795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300007004\|Ga0079218_12746518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300009094\|Ga0111539_10812457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1088	Open in IMG/M
3300009111\|Ga0115026_11170231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300009171\|Ga0105101_10533616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300009545\|Ga0105237_10632445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1077	Open in IMG/M
3300009678\|Ga0105252_10092681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1203	Open in IMG/M
3300010043\|Ga0126380_11439969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300010046\|Ga0126384_11094388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300010047\|Ga0126382_12049252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300010336\|Ga0134071_10098867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1384	Open in IMG/M
3300010371\|Ga0134125_11510299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300010375\|Ga0105239_13039210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300010400\|Ga0134122_10456797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300010403\|Ga0134123_12862689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300011406\|Ga0137454_1031659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300011423\|Ga0137436_1186700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300011430\|Ga0137423_1263330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300011435\|Ga0137426_1187356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	616	Open in IMG/M
3300011438\|Ga0137451_1150170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300011439\|Ga0137432_1142305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300012022\|Ga0120191_10150627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300012038\|Ga0137431_1197614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300012172\|Ga0137320_1112439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300012175\|Ga0137321_1087500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300012200\|Ga0137382_10236116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1264	Open in IMG/M
3300012227\|Ga0137449_1155450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300012360\|Ga0137375_10140758	All Organisms → cellular organisms → Bacteria → Proteobacteria	2373	Open in IMG/M
3300012362\|Ga0137361_11231070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300012506\|Ga0157324_1016891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300012514\|Ga0157330_1080315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300012515\|Ga0157338_1002049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1537	Open in IMG/M
3300012929\|Ga0137404_10724747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	900	Open in IMG/M
3300012930\|Ga0137407_10697915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	956	Open in IMG/M
3300012948\|Ga0126375_11736419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300012987\|Ga0164307_10273022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1192	Open in IMG/M
3300012988\|Ga0164306_10138887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1642	Open in IMG/M
3300012989\|Ga0164305_12082781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300014262\|Ga0075301_1157947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300014299\|Ga0075303_1095058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300014865\|Ga0180078_1035328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	804	Open in IMG/M
3300014868\|Ga0180088_1004838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1831	Open in IMG/M
3300014868\|Ga0180088_1101713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300014883\|Ga0180086_1211706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300014968\|Ga0157379_10247735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Propylenellaceae → Propylenella → Propylenella binzhouense	1617	Open in IMG/M
3300015241\|Ga0137418_10681427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300015373\|Ga0132257_101163883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	975	Open in IMG/M
3300015374\|Ga0132255_104146245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300018053\|Ga0184626_10147164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1002	Open in IMG/M
3300018056\|Ga0184623_10141601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300018061\|Ga0184619_10448803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300018076\|Ga0184609_10543269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300018469\|Ga0190270_10756796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	972	Open in IMG/M
3300020027\|Ga0193752_1147805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	926	Open in IMG/M
3300020583\|Ga0210401_10223653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1741	Open in IMG/M
3300021432\|Ga0210384_11873497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300022534\|Ga0224452_1261819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300025315\|Ga0207697_10135081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1067	Open in IMG/M
3300025315\|Ga0207697_10225068	Not Available	828	Open in IMG/M
3300025939\|Ga0207665_11379560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300025959\|Ga0210116_1065368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300025961\|Ga0207712_11367687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300027722\|Ga0209819_10322084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300027815\|Ga0209726_10094199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1836	Open in IMG/M
3300027831\|Ga0209797_10047003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1931	Open in IMG/M
3300027907\|Ga0207428_10157875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1724	Open in IMG/M
3300027909\|Ga0209382_10546071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1270	Open in IMG/M
3300031231\|Ga0170824_126267560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300031740\|Ga0307468_101512774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300031820\|Ga0307473_11100315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300032174\|Ga0307470_10113711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1582	Open in IMG/M
3300032782\|Ga0335082_11085922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300032893\|Ga0335069_11155552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300034148\|Ga0364927_0112088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	765	Open in IMG/M
3300034150\|Ga0364933_152429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.21%
Host-Associated	Host-Associated	24.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.01%
Aquatic	Environmental → Aquatic	28.21%
Plants	Host-Associated → Plants	24.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.30%
Sediment	Environmental → Aquatic → Sediment	17.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Marine	Environmental → Aquatic → Marine	6.84%
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Floodplain	Environmental → Terrestrial → Floodplain	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	17.09%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	17.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.85%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	12.82%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.85%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.85%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004148	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03141430	2088090014	Soil	TDVVSPLMKQAPPKMKVVPLPMTLATRYNEYFQTYRKVMGLK
ARcpr5yngRDRAFT_0263131	3300000043	Arabidopsis Rhizosphere	DVSSPILGEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
F24TB_107874371	3300000550	Soil	LSREGQEILAAVGYYAPRTDVVSPLMKQAPPKMKVVPLPMMLAIRYNEYFQTYRKVMGLK
F24TB_108626671	3300000550	Soil	LLSREGQEVLAAVGYYAPRTDVVSPLMKQAPPKMKVVPLPMMLATRYNEYFQMYRKVMGLK*
F24TB_120387102	3300000550	Soil	PILKEAPAKTKIVPLPMTLASRYNEYFETYRKVMGLR*
AF_2010_repII_A001DRAFT_100311692	3300000793	Forest Soil	VGYYAPRTDVVSPLMKQVPAKIKVLPLPMMLATRYNEYFQTYGKVMGLK*
JGI1027J12803_1008979141	3300000955	Soil	PRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
YBBDRAFT_12787591	3300001372	Marine Estuarine	ARLFNDFILSREGQELTAAAGYYAPRTDVTSPILKEAPPKTKIIPLAMTLAPRYNEYFQTYRKIMGLK*
JGI24751J29686_100690201	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	VDFLLSREGQEILGAAGYFAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0055472_101342382	3300003998	Natural And Restored Wetlands	ILSREGQEILAAVGYYAPRTDVVSPLMKQAPPNMKVVPLPMTLATRYNEYFQTYRKLMGLK*
Ga0055437_102200791	3300004009	Natural And Restored Wetlands	AASGYYVPRTDVSSPILREAPPKTKVIPLPMTLAPRYSEYYQTYRRVMGLK*
Ga0055499_100890011	3300004047	Natural And Restored Wetlands	AAAGYYAPRIDVASPILKEAPPKTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0062593_1014100512	3300004114	Soil	FLLSREGQELTAAAGYYAPRIDVASPILKEAPPKTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0055489_100750231	3300004145	Natural And Restored Wetlands	AAGYYVPRSDVASPILKEAPAKTKVLPLPMALAARYNEYFQTYRKLMGLK*
Ga0055521_101390211	3300004148	Natural And Restored Wetlands	PNAARLFNDFLLSRDGQELTAAAGYYAPRTDVTSPILKEAPPNTKIIPLAMTLAPRYNEYFQIYRKIMGLK*
Ga0062589_1018936262	3300004156	Soil	EGQELTAAAGYYVPRTDVASPILKEAPPRTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0063356_1028660081	3300004463	Arabidopsis Thaliana Rhizosphere	ARLLNDFLLSREGQELTAAAGYYVPRTDVASPILKEAPPRTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0063356_1043869821	3300004463	Arabidopsis Thaliana Rhizosphere	LFHDFLLSREGQEVIAAAGYYVPRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0068996_100847512	3300005218	Natural And Restored Wetlands	REGQELTAAAGYYAPRIDVASPILKEAPPKTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0065704_102190922	3300005289	Switchgrass Rhizosphere	GAAGYFAPRTDVSSPILGEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0065707_107778341	3300005295	Switchgrass Rhizosphere	FNDFLLSREGQEAIAADGYYVPRLDVLSPILKEAPPKTKVIPLPMTLAPRYNEYYQTYRKLMGLK*
Ga0070658_101507981	3300005327	Corn Rhizosphere	PRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0070689_1005776511	3300005340	Switchgrass Rhizosphere	QEVIAAAGYYVPRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0070687_1001984531	3300005343	Switchgrass Rhizosphere	EILGAAGYFAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0070675_1002973752	3300005354	Miscanthus Rhizosphere	YFAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0070675_1009725591	3300005354	Miscanthus Rhizosphere	YVPRTDVASPILKEAPPRTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0070659_1013728792	3300005366	Corn Rhizosphere	SAAHLFVDFLLSHEGQEILGAAGYFAPRSDVISPILSEAPPRTKIVPLPMTLAARYNDYFQMYRKIMGLP*
Ga0070667_1010056093	3300005367	Switchgrass Rhizosphere	LFVDFLLSHEGQEILGAAGYFAPRSDVISPILSEAPPRTKIVPLPMTLAARYNDYFQMYRKIMGLP*
Ga0070700_1013484792	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ILGAAGYFAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0070708_1022776611	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GQEILASVGYYAPRTDVVSPLMKQAPPKIKVIPLPMTMASRYDEYFQLYRKVMGLK*
Ga0070681_115332691	3300005458	Corn Rhizosphere	RTDVASPILKEAAPKTKVIPLPMTLASRYNEYYQTYRKVMGLK*
Ga0070706_1015496812	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DFLLSREGQEVFAAAGYFSPRSDVSSPILKEAPAKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0070699_1018045971	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0068855_1018988182	3300005563	Corn Rhizosphere	KEAPAGTKIVPLPMNLAPRYNEYFQTYRKVMGLR*
Ga0070702_1018660321	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VIAAAGYYVPRTDVASPILKEAAPKTKVIPLPMTLASRYNEYYQTYRKVMGLK*
Ga0068852_1021925701	3300005616	Corn Rhizosphere	QEILGAAGYFAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0066905_1012465622	3300005713	Tropical Forest Soil	LMKQAPPKMKVVPLPMMLATRYNEYFQIYRKVMGLK*
Ga0068866_103940092	3300005718	Miscanthus Rhizosphere	IAAAGYYVPRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0074051_107362801	3300006572	Soil	TAAAGYYAPRIDVASPILKEAPPKTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0075421_1004521082	3300006845	Populus Rhizosphere	RLLVDFLLSREGQEILGAAGYFAPRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0075430_1011189961	3300006846	Populus Rhizosphere	DVASPILKDAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0079219_105620131	3300006954	Agricultural Soil	LSEAPPKTKIVPLPMSLAPRYGEYFQTYRKIMGLR*
Ga0075419_107617952	3300006969	Populus Rhizosphere	LSREGQEILGAAGYFAPRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK
Ga0079218_127465181	3300007004	Agricultural Soil	TDVASPILKDAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGRK*
Ga0111539_108124572	3300009094	Populus Rhizosphere	ILKDAAPKTKVIPLPMRMAPRYNEYYQTYRRLMGLK*
Ga0115026_111702312	3300009111	Wetland	AAGYYAPRTDVASPILKETPAKTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0105101_105336162	3300009171	Freshwater Sediment	AGYYVPRTDVTSPILKEAPPKTKILPLPMSLAPRYNEYFQTYRKLMGLK*
Ga0105237_106324452	3300009545	Corn Rhizosphere	FAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0105252_100926812	3300009678	Soil	YAPRTDVASPILKETPAKTKILPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0126380_114399692	3300010043	Tropical Forest Soil	RTDVVSPLMKQVPAKIKVLSLPMMLATRYNEYFQTYGKVMGLK*
Ga0126384_110943881	3300010046	Tropical Forest Soil	RTDVVSPLMKQVPAKMKVIPLPMTLASRYNEYFQTYRKVMGLK*
Ga0126382_120492522	3300010047	Tropical Forest Soil	REGQEILAAVGYYAPRTDVVSPLMKQVPAKMKVIPLPMTLASRYNEYFQTYRKVMGLK*
Ga0134071_100988671	3300010336	Grasslands Soil	LKEAPAKTKIVPLPMTLASRYNEYFQTYRKVMGL*
Ga0134125_115102991	3300010371	Terrestrial Soil	ISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0105239_130392102	3300010375	Corn Rhizosphere	REGQEILAAAGYFAPRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0134122_104567971	3300010400	Terrestrial Soil	GYYVPRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0134123_128626891	3300010403	Terrestrial Soil	PILSEAPPRTKIVPLPMTLAARYNDYFQMYRKIMGLP*
Ga0137454_10316591	3300011406	Soil	LLSREGQEAIAADGYYVPRSDVLSAILKEAPPKTKVVPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0137436_11867002	3300011423	Soil	YFVPRTDVASPILKETPAKTKIVPLPMSLAPRYNEYFQSYRKLMGLK*
Ga0137423_12633302	3300011430	Soil	AAGYYVPRTDVASPILKDAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0137426_11873561	3300011435	Soil	QEILAAVGYYAPRTDVVSPLMKQAPPNIKVVPLPMMLATRYNEYFQTYRKLMGLK*
Ga0137451_11501701	3300011438	Soil	NDYLLSREGQEVIAAAGYHVPRTDVASPILKDAAPKTRVVPLPMSLAPRYNEYFQTYRKVMGLK*
Ga0137432_11423051	3300011439	Soil	DFILSREGQEILAAVGYYAPRTDVVSPLMKQAPPNIKVVPLPMMLATRYNEYFQTYRKVMGLK*
Ga0120191_101506272	3300012022	Terrestrial	LMKQAAPKMKVLPLPMMLATRYNEYFQMYRKVMGLK*
Ga0137431_11976142	3300012038	Soil	YVPRRDVAAPIMKQVPPKMKVIPLPMSLAARYSEYFQTYRKLMGLK*
Ga0137320_11124391	3300012172	Soil	SREGQEAIAADGYYVPRLDVLSPILKEAPAKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0137321_10875002	3300012175	Soil	VPRTDVASPILREAPAKTKVIPLPMTLAPRYNEYYQTYRKVMGLK*
Ga0137382_102361162	3300012200	Vadose Zone Soil	GYFAPRTDISSPILSEATPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0137449_11554502	3300012227	Soil	SREGQEIIAAAGYFVPRTDVASPILKETPAKTKIVPLPMSLAPRYNEYFQSYRKLMGLK*
Ga0137375_101407581	3300012360	Vadose Zone Soil	AAAGYFSPRSDVSSPILKEAPAKTKIVPLPMTLASRYNEYFQTYRKVMGLR*
Ga0137361_112310702	3300012362	Vadose Zone Soil	EGQEILASVGYYAPRTDVVSPLMKQAPPQIKVIPLPMTMASRYDEYFQLYRKVMGLK*
Ga0157324_10168911	3300012506	Arabidopsis Rhizosphere	AAGYFAPRTDVSSPILGEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0157330_10803151	3300012514	Soil	GQEILGAAGYFAPRTDVISPILSEAPPKTKIVPLPMSLAPRYGEYFQT*
Ga0157338_10020491	3300012515	Arabidopsis Rhizosphere	GYFAPRTDVSSPILGEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0137404_107247472	3300012929	Vadose Zone Soil	LAAAGYYAPRTDVISPLMKQAPAKMKVFPLPMMLATRYNEYFQTYRKVMGLK*
Ga0137407_106979152	3300012930	Vadose Zone Soil	GQEVFAAAGYFSPRSDVSSPILKEAPAKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0126375_117364192	3300012948	Tropical Forest Soil	AVGYYAPRTDVVTPLMKQVPPKIKVIPLPMALATRYNEYFQTYRKVMGLK*
Ga0164307_102730222	3300012987	Soil	SPILSEAPPRTKIVPLPMTLAARYNDYFQMYRKIMGLP*
Ga0164306_101388872	3300012988	Soil	AARLFVDFLLSHEGQEILGAAGYFAPRSDVISPILSEAPPRTKIVPLPMTLAARYNDYFQMYRKIMGLP*
Ga0164305_120827811	3300012989	Soil	LSREGQEILASVGYYAPRTDVVSPLMKQAPPKIKVIPLPMTMASRYDEYFQLYRKVMGLK
Ga0075301_11579471	3300014262	Natural And Restored Wetlands	IAASGYYVPRTDVASPILREAPPKTKVLPLPMTLAPRYTEYFQTYRKVMGLK*
Ga0075303_10950581	3300014299	Natural And Restored Wetlands	VLAASGYYVPRTDVSSPILREAPPKTKVIPLPMTLAPRYSEYYQTYRRVMGLK*
Ga0180078_10353282	3300014865	Soil	YYAPRTDVVSPLMKQAPPNIKVVPLPMMLATRYNEYFQTYRKLMGLK*
Ga0180088_10048383	3300014868	Soil	YVPRRDVAAPIMKQVPAKMKVIPLPMSLASRYNEYFQTYRKLMGLK*
Ga0180088_11017132	3300014868	Soil	EILAAVGYYAPRTDVVSPLMKQAPPNIKVVPLPMMLATRYNEYFQTYRKLMGLK*
Ga0180086_12117062	3300014883	Soil	YFVPRTDVASPILKETPAKTKIIPLPMSLAPRYNEYFQSYRKLMGLK*
Ga0157379_102477351	3300014968	Switchgrass Rhizosphere	TDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR*
Ga0137418_106814272	3300015241	Vadose Zone Soil	FAPRTDISSPILSEATPKTKIVPLPMTLASRYNEYFQTYRKVMGLK*
Ga0132257_1011638832	3300015373	Arabidopsis Rhizosphere	HEGQEILGAAGYFPPRTDVISPILSETPPKTKIVPLPMSLAPRYGEHFQTYRKIMGLR*
Ga0132255_1041462452	3300015374	Arabidopsis Rhizosphere	AGYFAPRTDVISPILSEAPPKMKIVPLPMSLAPRYGEYFQTYRKIMGLR*
Ga0184626_101471642	3300018053	Groundwater Sediment	GQEIIAEAGYYVPRRDVAAPIMKQVPAKMKVIPLPMSLAPRYNEYFQTYRKLMGLK
Ga0184623_101416012	3300018056	Groundwater Sediment	LKEAPPKTKVVPLPMTLAPRYNEYFQTYRKIMKLK
Ga0184619_104488031	3300018061	Groundwater Sediment	GQEVIAGAGYYVPRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK
Ga0184609_105432692	3300018076	Groundwater Sediment	LMKQAPPKIKVVPLPMTLATRYNEYFQMYRKVMGLK
Ga0190270_107567962	3300018469	Soil	ARLFNDFLLSREGQEITAAAGYFVPRTDVASPILKETPAKTKIIPLPMTLAPRYNEYFQNYRKLMGLK
Ga0193752_11478052	3300020027	Soil	YYVPRTDVASPILKEAAPKTKVIPLPMTLASRYNEYYQTYRKVMGLK
Ga0210401_102236532	3300020583	Soil	IDFMLSREGQEAMGISGYFVPRSDVSSPILKEAPPKTKVIPLPMTLAPHYDEYFQTYRKVMGLK
Ga0210384_118734971	3300021432	Soil	PILKEAPPKTKVIPLPMTLAPHYDEYFQTYRKVMGLK
Ga0224452_12618192	3300022534	Groundwater Sediment	QEVIASAGYYSPRADVTSPILKEAPARTKIVPLPMTLASRYNEYFQSYRKVMGLR
Ga0207697_101350812	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	GQEILGAAGYFAPRTDVISPILNEASPKTKIVPLPMTLAARYNEYFQMYRKIMGLR
Ga0207697_102250682	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LGAAGYFAPRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK
Ga0207665_113795602	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PLMKQAPPKIKVIPLPMTMASRYDEYFQLYRKVMGLK
Ga0210116_10653682	3300025959	Natural And Restored Wetlands	AAGYYVPRSDVASPILKEAPAKTKVLPLPMALAARYNEYFQTYRKLMGLK
Ga0207712_113676872	3300025961	Switchgrass Rhizosphere	PRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK
Ga0209819_103220842	3300027722	Freshwater Sediment	YAPRTDVVSPLMKQAPAKMKVVPLPMTLATRYNEYFQTYRKVMGLK
Ga0209726_100941991	3300027815	Groundwater	IAAAGYHVPRADVASPILKEAPAKTKVIPLPMSMAPRYNEYYQTYRKVMGLK
Ga0209797_100470033	3300027831	Wetland Sediment	FNDFLLSREGQEITAAAGYFVPRSDVVSPILRETPAKTKVLPLPMSLAPRYNEYFQTYRKLMGLK
Ga0207428_101578752	3300027907	Populus Rhizosphere	AGYFAPRTDVSSPILSEAPPKTKIVPLPMTLASRYNEYFQTYRKVMGLK
Ga0209382_105460711	3300027909	Populus Rhizosphere	ILKDAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK
Ga0170824_1262675601	3300031231	Forest Soil	FAPRTDVSSPILSEAPPKLKIVPLPMTLASRYNEYFQTYRKVMGLK
Ga0307468_1015127742	3300031740	Hardwood Forest Soil	EGQEVMGISGYFVPRSDVSSPILKEAPPKTKVIPLPMTLAPHYDEYFQTYRKVMGLK
Ga0307473_111003152	3300031820	Hardwood Forest Soil	RTDVVSPLMKQAPPKIKVIPLPMTMASRYDEYFQLYRKVMGLK
Ga0307470_101137112	3300032174	Hardwood Forest Soil	REGQEVMGISGYFVPRSDVSSPILKEAPPKTKVIPLPMTLAPHYDEYFQTYRKVMGLK
Ga0335082_110859222	3300032782	Soil	SVGYYAPRSDVVSPLMKQAPPKTKVIPLPMMMASRYDEYFQLYRKVMGLK
Ga0335069_111555521	3300032893	Soil	LSREGQEAMGVSGYYVPRTDVASPILQEAPPKTKVIPLPMTLAPRYNEYFQTFRKVMGLK
Ga0364927_0112088_654_764	3300034148	Sediment	ILKETPAKTKILPLPMSLAPRYNEYFQTYRKVMGLK
Ga0364933_152429_458_595	3300034150	Sediment	VPRTDVASPILKEAAPKTKVIPLPMTLAPRYNEYYQTYRKVMGLK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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