Metagenome / Metatranscriptome Family F077957

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077957
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	46 residues
Representative Sequence	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTEPLVVYGSR
Number of Associated Samples	74
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.49 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	81.20 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.949 % of family members)
Environment Ontology (ENVO)	Unclassified (29.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.45% β-sheet: 2.13% Coil/Unstructured: 40.43%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00534	Glycos_transf_1	44.44
PF13439	Glyco_transf_4	8.55
PF13524	Glyco_trans_1_2	5.98
PF11271	PorA	3.42
PF00160	Pro_isomerase	2.56
PF02803	Thiolase_C	0.85
PF00117	GATase	0.85
PF00665	rve	0.85
PF09723	Zn-ribbon_8	0.85
PF06781	CrgA	0.85
PF13649	Methyltransf_25	0.85
PF01872	RibD_C	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	2.56
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.85
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.85
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.85
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.85
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.28 %
Unclassified	root	N/A	44.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.72 %
Unclassified	root	N/A	44.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_103122484	Not Available	537	Open in IMG/M
3300001431\|F14TB_100652595	Not Available	529	Open in IMG/M
3300003203\|JGI25406J46586_10001652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10526	Open in IMG/M
3300003373\|JGI25407J50210_10014742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2016	Open in IMG/M
3300003373\|JGI25407J50210_10028533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1447	Open in IMG/M
3300003373\|JGI25407J50210_10041786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1173	Open in IMG/M
3300003373\|JGI25407J50210_10050111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300003373\|JGI25407J50210_10077700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300003373\|JGI25407J50210_10078748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	820	Open in IMG/M
3300003373\|JGI25407J50210_10084401	Not Available	788	Open in IMG/M
3300003373\|JGI25407J50210_10099675	Not Available	718	Open in IMG/M
3300004016\|Ga0058689_10042482	Not Available	820	Open in IMG/M
3300004463\|Ga0063356_100966559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300005562\|Ga0058697_10168192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300005562\|Ga0058697_10246441	Not Available	830	Open in IMG/M
3300005562\|Ga0058697_10302139	All Organisms → cellular organisms → Bacteria → Terrabacteria group	764	Open in IMG/M
3300005562\|Ga0058697_10361472	Not Available	710	Open in IMG/M
3300005562\|Ga0058697_10484277	Not Available	629	Open in IMG/M
3300005937\|Ga0081455_10031291	All Organisms → cellular organisms → Bacteria	4817	Open in IMG/M
3300005981\|Ga0081538_10002697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17076	Open in IMG/M
3300005981\|Ga0081538_10005256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11693	Open in IMG/M
3300005981\|Ga0081538_10046493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2676	Open in IMG/M
3300005981\|Ga0081538_10166302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	970	Open in IMG/M
3300005985\|Ga0081539_10089036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1600	Open in IMG/M
3300006845\|Ga0075421_100047580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5435	Open in IMG/M
3300006847\|Ga0075431_100661804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300007004\|Ga0079218_10701952	Not Available	949	Open in IMG/M
3300009094\|Ga0111539_11756359	Not Available	719	Open in IMG/M
3300009147\|Ga0114129_10382772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1858	Open in IMG/M
3300009157\|Ga0105092_10862545	Not Available	533	Open in IMG/M
3300009789\|Ga0126307_11230708	Not Available	606	Open in IMG/M
3300009789\|Ga0126307_11787187	Not Available	500	Open in IMG/M
3300009797\|Ga0105080_1048284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300009798\|Ga0105060_101508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300009805\|Ga0105079_1045230	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	513	Open in IMG/M
3300009807\|Ga0105061_1033006	Not Available	738	Open in IMG/M
3300009809\|Ga0105089_1100130	Not Available	514	Open in IMG/M
3300009815\|Ga0105070_1075772	Not Available	644	Open in IMG/M
3300009816\|Ga0105076_1027953	Not Available	990	Open in IMG/M
3300009840\|Ga0126313_10009817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5987	Open in IMG/M
3300009840\|Ga0126313_10011991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5520	Open in IMG/M
3300010029\|Ga0105074_1019554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300010038\|Ga0126315_11198805	Not Available	516	Open in IMG/M
3300010041\|Ga0126312_11119511	Not Available	579	Open in IMG/M
3300010041\|Ga0126312_11431316	Not Available	512	Open in IMG/M
3300010044\|Ga0126310_10286707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300010362\|Ga0126377_11965710	Not Available	661	Open in IMG/M
3300012021\|Ga0120192_10152360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012355\|Ga0137369_10042795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4034	Open in IMG/M
3300012355\|Ga0137369_10179698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1655	Open in IMG/M
3300012938\|Ga0162651_100028861	Not Available	802	Open in IMG/M
3300014487\|Ga0182000_10005250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2902	Open in IMG/M
3300014487\|Ga0182000_10375893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300014487\|Ga0182000_10644726	Not Available	517	Open in IMG/M
3300017965\|Ga0190266_10192940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300017965\|Ga0190266_10511296	Not Available	703	Open in IMG/M
3300017965\|Ga0190266_10913195	Not Available	578	Open in IMG/M
3300018028\|Ga0184608_10447815	Not Available	556	Open in IMG/M
3300018031\|Ga0184634_10047993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1756	Open in IMG/M
3300018052\|Ga0184638_1098443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1073	Open in IMG/M
3300018052\|Ga0184638_1258945	Not Available	597	Open in IMG/M
3300018075\|Ga0184632_10314871	All Organisms → cellular organisms → Bacteria → Terrabacteria group	676	Open in IMG/M
3300018076\|Ga0184609_10001479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7429	Open in IMG/M
3300018076\|Ga0184609_10018009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2756	Open in IMG/M
3300018081\|Ga0184625_10268887	Not Available	892	Open in IMG/M
3300018465\|Ga0190269_10044096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2046	Open in IMG/M
3300018465\|Ga0190269_11319758	Not Available	578	Open in IMG/M
3300018465\|Ga0190269_11358856	Not Available	573	Open in IMG/M
3300018466\|Ga0190268_10021801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2099	Open in IMG/M
3300018466\|Ga0190268_11724352	Not Available	560	Open in IMG/M
3300018469\|Ga0190270_12358413	Not Available	593	Open in IMG/M
3300018476\|Ga0190274_13496870	Not Available	530	Open in IMG/M
3300019377\|Ga0190264_10142517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300019377\|Ga0190264_10855177	Not Available	702	Open in IMG/M
3300019767\|Ga0190267_10295739	Not Available	835	Open in IMG/M
3300019767\|Ga0190267_11004459	Not Available	586	Open in IMG/M
3300021073\|Ga0210378_10003345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7803	Open in IMG/M
3300021078\|Ga0210381_10274253	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021972\|Ga0193737_1061322	Not Available	532	Open in IMG/M
3300027006\|Ga0209896_1026395	Not Available	660	Open in IMG/M
3300027324\|Ga0209845_1001940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3607	Open in IMG/M
3300027379\|Ga0209842_1044838	Not Available	809	Open in IMG/M
3300027561\|Ga0209887_1022106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300027718\|Ga0209795_10037119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300027718\|Ga0209795_10095452	Not Available	854	Open in IMG/M
3300027750\|Ga0209461_10053069	Not Available	830	Open in IMG/M
3300027750\|Ga0209461_10087766	All Organisms → cellular organisms → Bacteria → Terrabacteria group	689	Open in IMG/M
3300027750\|Ga0209461_10106876	Not Available	641	Open in IMG/M
3300027809\|Ga0209574_10095893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300027809\|Ga0209574_10307999	Not Available	542	Open in IMG/M
3300027957\|Ga0209857_1083432	Not Available	539	Open in IMG/M
3300028712\|Ga0307285_10179608	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028722\|Ga0307319_10093866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300028787\|Ga0307323_10314714	Not Available	562	Open in IMG/M
3300028807\|Ga0307305_10085520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300028878\|Ga0307278_10009363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4611	Open in IMG/M
3300030496\|Ga0268240_10015650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1370	Open in IMG/M
3300031114\|Ga0308187_10190374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300031548\|Ga0307408_100248643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1465	Open in IMG/M
3300031548\|Ga0307408_101535275	Not Available	631	Open in IMG/M
3300031548\|Ga0307408_101710212	Not Available	600	Open in IMG/M
3300031548\|Ga0307408_101900809	Not Available	571	Open in IMG/M
3300031731\|Ga0307405_10004985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6346	Open in IMG/M
3300031731\|Ga0307405_10658633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300031731\|Ga0307405_11528568	Not Available	587	Open in IMG/M
3300031731\|Ga0307405_11767183	Not Available	549	Open in IMG/M
3300031824\|Ga0307413_10551463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	935	Open in IMG/M
3300031852\|Ga0307410_10227225	Not Available	1439	Open in IMG/M
3300031852\|Ga0307410_11013803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300031852\|Ga0307410_11563475	Not Available	582	Open in IMG/M
3300032004\|Ga0307414_10012270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5060	Open in IMG/M
3300032126\|Ga0307415_100216812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1531	Open in IMG/M
3300032159\|Ga0268251_10075891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300032159\|Ga0268251_10166999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300034026\|Ga0334946_026422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300034172\|Ga0334913_003510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4751	Open in IMG/M
3300034172\|Ga0334913_007646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.12%
Host-Associated	Host-Associated	41.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.72%
Plants	Host-Associated → Plants	41.88%
Aquatic	Environmental → Aquatic	9.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Roots	Host-Associated → Plants → Roots	10.26%
Phylloplane	Host-Associated → Plants → Phylloplane	9.40%
Sediment	Environmental → Aquatic → Sediment	6.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Phyllosphere	Host-Associated → Plants → Phyllosphere	3.42%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Sand	Environmental → Terrestrial → Soil → Sand	11.11%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	10.26%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	3.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.56%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	10.26%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.56%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	11.11%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	10.26%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	9.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	3.42%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.56%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009797	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20	Environmental	Open in IMG/M
3300009798	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1031224841	3300000559	Soil	MSGLTLRVLVGLAAGALVLAFVASLALISSQGASSVSGEPLIVYG
F14TB_1006525952	3300001431	Soil	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTEPLVVYGSR*
JGI25406J46586_1000165211	3300003203	Tabebuia Heterophylla Rhizosphere	MSGLTVRALAAMAAGALVLAFIASLILVSSQNASSVSTRPLVVYGSR*
JGI25407J50210_100147422	3300003373	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLFIVSSQNASSVSTEPLVVYGSR*
JGI25407J50210_100285332	3300003373	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLALVSSQNASSVSTKPLVVYGSR*
JGI25407J50210_100417862	3300003373	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR*
JGI25407J50210_100501112	3300003373	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR*
JGI25407J50210_100777002	3300003373	Tabebuia Heterophylla Rhizosphere	MSGLTLRVLAALAAGALVLAFVSSLVLVSSQSASSVSTKPLVVYGSR*
JGI25407J50210_100787481	3300003373	Tabebuia Heterophylla Rhizosphere	MSGLTLRVLAALAAGALVLAFVASLVLVSSQSASSVPTRPLVQYGSR*
JGI25407J50210_100844012	3300003373	Tabebuia Heterophylla Rhizosphere	MTGLTLRLLAAIAAGALVLAFVASLALISSQGASSVSGEPLIVYGSR*
JGI25407J50210_100996752	3300003373	Tabebuia Heterophylla Rhizosphere	MTGLTLRVLAALAAGALVLAFVTSLVLVSSQSASSVSTTPLVQYGSR*
Ga0058689_100424822	3300004016	Agave	MTGLTLRVLAALAAGALVLAFVSSLVLVSSQSGSSVSTRPLVQYGSR*
Ga0063356_1009665591	3300004463	Arabidopsis Thaliana Rhizosphere	MTGLTLRLLAAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSRQP*
Ga0058697_101681921	3300005562	Agave	MTGLTLRLLAAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR*
Ga0058697_102464412	3300005562	Agave	MSGLTLRLLVAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR*
Ga0058697_103021392	3300005562	Agave	MTGLTLRVLAAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR*
Ga0058697_103614722	3300005562	Agave	MTGLTLRLLAAIAAGALVLAFVASLVLISSQGASSVSGEPLVVYGSR*
Ga0058697_104842771	3300005562	Agave	MSGLTLRALAALAAGALVLAFVASLALVSSQNASSVSTRPLVVYGSR*
Ga0081455_100312915	3300005937	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLFIVSSQNASSVSTKPLVVYGSR*
Ga0081538_100026973	3300005981	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLVLVSSQNATSVSSKPLVVYGSR*
Ga0081538_100052564	3300005981	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFIASLVLVSSQNASSVSTKPLVVYGSR*
Ga0081538_100464932	3300005981	Tabebuia Heterophylla Rhizosphere	MSGLTLRALAALAAGALVLAFVASLFIVSSQNASSVSTRPLVVYGSR*
Ga0081538_101663022	3300005981	Tabebuia Heterophylla Rhizosphere	MSGLTLRLLVALAGGALVLAFVASLVLVASQDASSVSSEPLIVYGSR*
Ga0081539_100890362	3300005985	Tabebuia Heterophylla Rhizosphere	MTGLTLRFLVAIAVGALVLAFVASLALISSQSASSVSGEPLVVYGSR*
Ga0075421_1000475803	3300006845	Populus Rhizosphere	MSGLTLRALAALAAGALVLAFVASLFLVSSQNASSVSTEPLVVYGSR*
Ga0075431_1006618042	3300006847	Populus Rhizosphere	MSGLTLRALAALAAGALVLAFVASLFLVSSQNASSVSTKPLVVYGSR*
Ga0079218_107019522	3300007004	Agricultural Soil	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASTVSSKPLVVYGSR*
Ga0111539_117563592	3300009094	Populus Rhizosphere	MSGLTLRALAAMAAGALVLAFVASLILVSSQNASSVSTRPLVVYGSR*
Ga0114129_103827722	3300009147	Populus Rhizosphere	MSGLTMRALAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR*
Ga0105092_108625452	3300009157	Freshwater Sediment	MRALAALAAGALVLAFVASLVLVSSQNASSVSTEPLVVYGSR*
Ga0126307_112307082	3300009789	Serpentine Soil	MSGLTLRALAALAAGALVLAFVASLAIVSSQNASSVSTRPLVVYGSR*
Ga0126307_117871872	3300009789	Serpentine Soil	MTGLTLRLLAAIAAGALVLAFVASLVLISSQGASSVSGEPLIVYGSR*
Ga0105080_10482842	3300009797	Groundwater Sand	MSGLTLRVLAALAAGALVLAFVASLVLVSSQSASSVSTRPLVQYGSR*
Ga0105060_1015082	3300009798	Groundwater Sand	MSGLTLRVLAALAAGALVLAFVTSLVLVSSQSASSVSTRPLVQYGSR*
Ga0105079_10452302	3300009805	Groundwater Sand	MSGLTLRVLAALAAGALVLAFVTSLVLVSSQSASSVSTRPVVQYGSR*
Ga0105061_10330061	3300009807	Groundwater Sand	MTGLTIRVLAALSAGALILAFISALVLVSSQGASSVSTEPLLVYGSR*
Ga0105089_11001302	3300009809	Groundwater Sand	MSGLTVRVLAALAAGALVLAFVTSLALVSSQSASSQSTRPLLQYGSR*
Ga0105070_10757721	3300009815	Groundwater Sand	MSGLTVRVLAALAAGALVLAFVTSLALVSSQRASSQSTRPLLQYGSR*
Ga0105076_10279532	3300009816	Groundwater Sand	MNGLTMRILAALAAGALILAFVSSLVLVSSQGASSVSTEPLLVYGSR*
Ga0126313_100098174	3300009840	Serpentine Soil	MSGLTLRVLAALAAGALVLAFVSSLALVSSQSASSVSTKPLVVYGSR*
Ga0126313_100119912	3300009840	Serpentine Soil	MSGLTLRALAVLAAGALVLAFVASLFIVSSQNASSVSTKPLVVYGSR*
Ga0105074_10195542	3300010029	Groundwater Sand	MSGLTLRVLAALAAGALVLAFVTSLVPVSSQSASSVSTRPLVQYGSR*
Ga0126315_111988051	3300010038	Serpentine Soil	MSGLTLRVLAALAAGALVLAFVASLVLVSSQNASSVSSRPLVVYGSR*
Ga0126312_111195111	3300010041	Serpentine Soil	MSGLTLRALAALAAGALVLAFVASLAIVSSQNASSVSTRPL
Ga0126312_114313162	3300010041	Serpentine Soil	VLAALAAGALVLAFVSSLALVSSQSASSVSTKPLVVYGSR*
Ga0126310_102867071	3300010044	Serpentine Soil	MSGLTLRALAALAAGALVLAFVASLAIVSSQNASSVSTRPLVVY
Ga0126377_119657102	3300010362	Tropical Forest Soil	MSGLTMRTLAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR*
Ga0120192_101523602	3300012021	Terrestrial	MSGLTLRVLAALAAGALVLAFVSSLVLVSSQTATSVSTRPLVRYGSR*
Ga0137369_100427952	3300012355	Vadose Zone Soil	MSGLTMRILAALAAVALILAFVSSLVLVTSQGASSVSTEPLLVYGSR*
Ga0137369_101796982	3300012355	Vadose Zone Soil	MTGLTIRVLAALSAGALILAFISALVLVSSPGASSVSTEPLLVYGSR*
Ga0162651_1000288611	3300012938	Soil	MSGLTLRALAALAAGALVLAFVASLFLVASQNASSVSTEPLVVYGSR*
Ga0182000_100052503	3300014487	Soil	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSSRPLVVYGSR*
Ga0182000_103758931	3300014487	Soil	MSGLTLRLLVAIAAGALVLAFVASLALISSQSASSVSGQPLIVY
Ga0182000_106447262	3300014487	Soil	SRMSGLTLRALATLAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR*
Ga0190266_101929402	3300017965	Soil	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0190266_105112962	3300017965	Soil	MTGLTLRFLVAIAAGALVLAFVASLALISSQGASSVSGEPLIVYGSR
Ga0190266_109131952	3300017965	Soil	MSGLTLRLLVGLAAGALVLAFVASLALISSQGASSVSGEPLIVYGSR
Ga0184608_104478152	3300018028	Groundwater Sediment	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVY
Ga0184634_100479932	3300018031	Groundwater Sediment	MSGLTLRVLAALAAGALVLAFVTSLVLVSSQSASSVSTRPLVQYGSR
Ga0184638_10984432	3300018052	Groundwater Sediment	MSGLTLRVLAALAAGALVLAFVSSLVLVSSQSASSVSTRPLVQYGSR
Ga0184638_12589451	3300018052	Groundwater Sediment	MSGLTMRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0184632_103148712	3300018075	Groundwater Sediment	PMSGLTLRVLAGLAVGALVLAFVASLVLVSSQGASSVSTEPLIVYGSR
Ga0184609_100014791	3300018076	Groundwater Sediment	GLAVGALVLAFVASLVLVSSQGASSVSTEPLIVYGSR
Ga0184609_100180093	3300018076	Groundwater Sediment	MSGLKLRVLVGLAVGALVLAFVASLVLVSSQGASSVSTEPLIVYGSR
Ga0184625_102688872	3300018081	Groundwater Sediment	MSGLTLRALAALAAGALVLAFVASLFLVSSQNASSVSTEPLVVYGSR
Ga0190269_100440962	3300018465	Soil	MSGLTLRALAALAAGALVLAFVASLFIVSSQNASSVSTKPLVVYGSR
Ga0190269_113197581	3300018465	Soil	PPVAPVGILRPTSPTRSRMSGLTLRTLAALAAGALVLAFVASLVLVSSQNASSVSTRSLVVYGSR
Ga0190269_113588561	3300018465	Soil	PRRSRMSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0190268_100218012	3300018466	Soil	MTGLTLRLLAAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR
Ga0190268_117243521	3300018466	Soil	RMSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR
Ga0190270_123584131	3300018469	Soil	MSGLTLRALVALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0190274_134968701	3300018476	Soil	RALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0190264_101425172	3300019377	Soil	MSGLTLRVLAGLAVGALVLAFVASLVLVSSQGASSVSSEPLIVYGSR
Ga0190264_108551772	3300019377	Soil	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSNEPLVVYGSR
Ga0190267_102957392	3300019767	Soil	MSGLTLRVLVGLAAGALVLAFVASLALISSQGASSVSGEPLIVYGSR
Ga0190267_110044592	3300019767	Soil	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR
Ga0210378_100033455	3300021073	Groundwater Sediment	MSGLTVRVLAALAAGALVLAFVTSLALVSSQSASSQSTRPLLQYGSR
Ga0210381_102742532	3300021078	Groundwater Sediment	TLRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0193737_10613222	3300021972	Soil	MSGLTLRVLAGLAVGALVLAFVASLVLVSSQGASSVSTEPLIVYGSR
Ga0209896_10263951	3300027006	Groundwater Sand	LAALAAGALVLAFVSSLVLVSSQSASSVSTRPLVQYGSR
Ga0209845_10019402	3300027324	Groundwater Sand	MSGLTLRVLAALAAGALVLAFITSLVLVSSQSASSVSTRPLVQYGSR
Ga0209842_10448381	3300027379	Groundwater Sand	NGLTMRILAALAAGALILAFVSSLVLVSSQGASSVSTEPLLVYGSR
Ga0209887_10221062	3300027561	Groundwater Sand	MNGLTMRILAALAAGALILAFVSSLVLVSSQGASSVSTEPLLVYGSR
Ga0209795_100371192	3300027718	Agave	MTGLTLRLLAAIAAGALVLAFVASLVLISSQGASSVSGEPLIVYGSR
Ga0209795_100954522	3300027718	Agave	MTGLTLRVLAALAAGALVLAFVSSLVLVSSQSSSSVSTRPLVQYGSR
Ga0209461_100530692	3300027750	Agave	MSGLTLRALAALAAGALVLAFVASLALVSSQNASSVSTRPLVVYGSR
Ga0209461_100877662	3300027750	Agave	MSGLTLRLLVAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR
Ga0209461_101068762	3300027750	Agave	MTGLTLRLLAAIAAGALVLAFVASLVLISSQGASSVSGEPLVVYGSR
Ga0209574_100958932	3300027809	Agave	MTGLTLRLLAAIAAGALVLAFVASLALISSQGASSVSGEPLIVYGSR
Ga0209574_103079991	3300027809	Agave	MSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSSRPLVVYGSR
Ga0209857_10834322	3300027957	Groundwater Sand	TMRILAALAAGALILAFVSSLVLVSSQGASSVSTEPLLVYGSR
Ga0307285_101796082	3300028712	Soil	LAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0307319_100938661	3300028722	Soil	ALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0307323_103147142	3300028787	Soil	LRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0307305_100855203	3300028807	Soil	AAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR
Ga0307278_100093633	3300028878	Soil	MSGLTLRTLAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0268240_100156501	3300030496	Soil	MSGLTLRALAVLAAGALVLAFVASLVLVSSQNASSVSSRPLVVYGSR
Ga0308187_101903741	3300031114	Soil	RMTGLTLRFLVAIAAGALVLAFVASLALISSQGASSVSGEPLIVYGSR
Ga0307408_1002486432	3300031548	Rhizosphere	MSGLTLRALAALAAGALVLAFVASLALVSSQNASSVSTKPLVVYGSR
Ga0307408_1015352751	3300031548	Rhizosphere	ALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR
Ga0307408_1017102122	3300031548	Rhizosphere	MSGLTLRVLAALAAGALALAFVSSLALVSSQSASSVSTKPLVVYGSR
Ga0307408_1019008091	3300031548	Rhizosphere	RRSRMSGLTLRALAALAAGALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0307405_100049855	3300031731	Rhizosphere	MSGLTLRALAVLAAGALVLAFVASLFIVSSQNASSVSTKPLVVYGSR
Ga0307405_106586332	3300031731	Rhizosphere	MTGLTLRLLVALAAGALVLAFVASLVLISSQGASSVSGEPLIVYGSR
Ga0307405_115285682	3300031731	Rhizosphere	MSGLTLRALAALAAGALVLAFVASLAIVSSQNASSVSTRPLVVYGSR
Ga0307405_117671832	3300031731	Rhizosphere	TLRALAALAAGALVLAFVASLAIVSSQNASSVSTRPLVVYGSR
Ga0307413_105514631	3300031824	Rhizosphere	TLRLLAAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR
Ga0307410_102272251	3300031852	Rhizosphere	MSGLTLRVLAALAAGALVLAFVSSLALVSSQSASSVSTKPLVVYGSR
Ga0307410_110138031	3300031852	Rhizosphere	LAALAAGALVLAFVASLFIVSSQNASSVSTKPLVVYGSR
Ga0307410_115634751	3300031852	Rhizosphere	TLRALAALAAGALVLAFVASLVLVSSQNASSVSTRPLVVYGSR
Ga0307414_100122705	3300032004	Rhizosphere	MTGLTLRLLAAIAAGALILAFVASLALISSQSASSVSGEPLIVYGSR
Ga0307415_1002168122	3300032126	Rhizosphere	MTGLTLRVLAALAAGALVLAFVASLVLVSSQSASSVPTRPLVQYGSR
Ga0268251_100758912	3300032159	Agave	MSGLTLRALAALAAGALVLAFVASLAIVSSQNASSVSTKPLVVYGSR
Ga0268251_101669992	3300032159	Agave	MTGLTLRLLAAIAAGALVLAFVASLALISSQGASSVSGEPLIVY
Ga0334946_026422_762_905	3300034026	Sub-Biocrust Soil	MSGLTLRALAALAASALVLAFVASLVLVSSQNASSVSTKPLVVYGSR
Ga0334913_003510_2999_3142	3300034172	Sub-Biocrust Soil	MTGLTLRVLAAIAAGALVLAFVASLALISSQSASSVSGEPLIVYGSR
Ga0334913_007646_1842_1985	3300034172	Sub-Biocrust Soil	MTGLTLRVLAALAAGALVLAFVSSLVLVSSQSGSSVSTRPLVQYGSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077957

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences